View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2933_high_2 (Length: 444)
Name: NF2933_high_2
Description: NF2933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2933_high_2 |
 | |
|
| [»] chr6 (40 HSPs) |
| |
|
| [»] scaffold0199 (1 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
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| [»] chr5 (2 HSPs) |
| |
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| [»] scaffold0288 (1 HSPs) |
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| [»] scaffold0477 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 383; Significance: 0; HSPs: 40)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 18 - 444
Target Start/End: Complemental strand, 4593198 - 4592772
Alignment:
| Q |
18 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4593198 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
4593099 |
T |
|
| Q |
118 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4593098 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
4592999 |
T |
|
| Q |
218 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592998 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
4592899 |
T |
|
| Q |
318 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||| ||||||||||||| ||||| |
|
|
| T |
4592898 |
cattattaaaccaaactccacaaatccatcaattggattcttttggttccaacatatggaaagaagatactgagtgtcttaaatggcttgaatcgaagga |
4592799 |
T |
|
| Q |
418 |
gccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|| | |||||||||||||||||||| |
|
|
| T |
4592798 |
atcgggttccgttgtttatgtgaattt |
4592772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 444
Target Start/End: Complemental strand, 4564676 - 4564252
Alignment:
| Q |
18 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
||||||| |||||||| | ||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4564676 |
cttcaagatattaact--gatacatttgatatgcagatcagagctatctaacaaatggatatttggaaactaatgtagattggattccaggtttgaaaaa |
4564579 |
T |
|
| Q |
118 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
217 |
Q |
| |
|
||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || | | || |
|
|
| T |
4564578 |
ctttcggttaaaggatatctttgacagtatcaggacaacagatccaaatgatattatgttagactttgtaattgatgcggctgataaagttcttggagac |
4564479 |
T |
|
| Q |
218 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
317 |
Q |
| |
|
||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564478 |
tctacaattgttttgaatactttccatgaactttagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
4564379 |
T |
|
| Q |
318 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564378 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
4564279 |
T |
|
| Q |
418 |
gccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||| |||||||||||||||||||||| |
|
|
| T |
4564278 |
gccgggatccgttgtttatgtgaattt |
4564252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 444
Target Start/End: Complemental strand, 4617989 - 4617563
Alignment:
| Q |
18 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4617989 |
cttcaagctattaactttcgtccttatgatatgcagatgagagttatctaacaaatggatgtttggaaactaaagtagattggattcccggtttgaaaaa |
4617890 |
T |
|
| Q |
118 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
217 |
Q |
| |
|
|||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||||| | || | || || || || ||| || | | ||| || |
|
|
| T |
4617889 |
ctttcggttgaaggacatcgttgactttatcaggacaacaaatccaaatgatattatgttagaattctttatagaagttgcagatcgagttaacaaagac |
4617790 |
T |
|
| Q |
218 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
317 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| || |||||||||||||||| |
|
|
| T |
4617789 |
actactattcttttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctccacaattccttctatttatccgattggccctttacctt |
4617690 |
T |
|
| Q |
318 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
4617689 |
cattattaaaacaaactccacaaattcatcaattggactctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaagga |
4617590 |
T |
|
| Q |
418 |
gccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||| |||| ||||||||||||||||| |
|
|
| T |
4617589 |
gccgggatcagttgtttatgtgaattt |
4617563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 18 - 444
Target Start/End: Complemental strand, 4602756 - 4602330
Alignment:
| Q |
18 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
||||||| ||||||||| | ||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4602756 |
cttcaagatattaacttctgtgcttatgatatgcagatgatagttatctaacaaatggatgtttggaaacaaaagtagattggattccaggtttgaaaaa |
4602657 |
T |
|
| Q |
118 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || | |||| | || |||| | | ||| | || |
|
|
| T |
4602656 |
ctttcggttgaaggacattcttgactatatcaggacaacagatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagac |
4602557 |
T |
|
| Q |
218 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
317 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||| ||||| || | |||||||| |||||| | || | || || ||||| | || |
|
|
| T |
4602556 |
tctactattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgcatt |
4602457 |
T |
|
| Q |
318 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4602456 |
cattattaaatcaaactccacaaattcatcaattggactgtttaggttccaacctctggaaagaagatactgagtgtcttgaatggcttgaatccaagga |
4602357 |
T |
|
| Q |
418 |
gccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||| |||||||||||||||||||||| |
|
|
| T |
4602356 |
gccgggatccgttgtttatgtgaattt |
4602330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 50 - 444
Target Start/End: Original strand, 4299021 - 4299412
Alignment:
| Q |
50 |
gcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgactatatca |
149 |
Q |
| |
|
||||||||||||||| | ||||| |||||||| || | ||| |||| || |||||||| ||| | |||||||| ||||| || | |||||| ||| | |
|
|
| T |
4299021 |
gcagatgagagttatttgacaaacggatatttagacatcaaactagactgtattccaggattgcagaactttcgattgaaagatctaactgactttataa |
4299120 |
T |
|
| Q |
150 |
ggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaatgaact |
249 |
Q |
| |
|
||| ||| ||||||||||| | ||| || | |||| ||||| | ||| |||| | ||| ||| ||| ||||| |||| ||||||| ||||||| |
|
|
| T |
4299121 |
ggagtacaaatccaaatgatgtcatggtagaatttgccattgaagcggcagatagatttcacaaagcatctgctattgtttttaatacttatgatgaact |
4299220 |
T |
|
| Q |
250 |
tgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaa |
349 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| |||||| | || | ||||| |||||||||||||||||||| ||||||||||| | |||| |
|
|
| T |
4299221 |
tgagagtgatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccacata---atcac |
4299317 |
T |
|
| Q |
350 |
ttggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4299318 |
ttggaatctttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattt |
4299412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 44 - 444
Target Start/End: Original strand, 4514315 - 4514712
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||| |||||||| || ||||||||||||||| ||||||| | |||||||| || |||| | |
|
|
| T |
4514315 |
tgatatgcagatgagagttatttgacaaatggatatttggacactaaagttgactggattccaggtttgcgaaactttagactgaaggaccttcctgatt |
4514414 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
||| ||||||||||| | |||||| | |||||| | ||| | |||| ||| |||| | ||||| | ||| ||||| |||| ||||||| || |
|
|
| T |
4514415 |
ttatacggacaacagatgctaatgatttgatgttagaatttatctttgaaatggtagatagacttcatagagcttctgctatttttttaaatacttctaa |
4514514 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatt |
343 |
Q |
| |
|
||| |||||||||||||| || |||||||| | |||||| | |||||||| ||| |||||||||| || |||| || || || |||| |||||||| |
|
|
| T |
4514515 |
tgatcttgagagtgatgttatgaatgctctttattctatgctcccttctctatacaccattggcccatttgcttcgtttttgaatcaaagtccacaaa-- |
4514612 |
T |
|
| Q |
344 |
catcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatt |
443 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || || | |||| ||||||||||| |||| |
|
|
| T |
4514613 |
-atcacttggaatctttaggttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaatt |
4514711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 45 - 444
Target Start/End: Original strand, 4266358 - 4266757
Alignment:
| Q |
45 |
gatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagat---tggattccaggtttgaaaaactttcggttgaaggacattgctga |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || | |||||| | | ||||||| ||||||| |||||||| ||||||||||| || |||| |
|
|
| T |
4266358 |
gatatgcagatgagagttatctaacaaatggatatttagataataaagttggtgactggattcaaggtttgcaaaactttaggttgaaggaccttcctga |
4266457 |
T |
|
| Q |
142 |
ctatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttc |
241 |
Q |
| |
|
| || |||| |||||||| |||||| | ||| |||| ||| | | || ||||| |||| | ||| | |||| ||||| || | ||||||| |
|
|
| T |
4266458 |
ttttacaaggattacagatcctaatgatttgatgataaaatttattaccgaagtggcggatagatgtcaccgagcctcttctattgttatcaatacttca |
4266557 |
T |
|
| Q |
242 |
aatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaa |
341 |
Q |
| |
|
||||||||||||||||||| || |||||||||| ||||||||| |||||| | ||| |||||||||| || |||| || ||||| |||| |||||||| |
|
|
| T |
4266558 |
tatgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaa |
4266657 |
T |
|
| Q |
342 |
ttcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaa |
441 |
Q |
| |
|
|||| |||| |||||| |||||| |||||||||||||||||||| |||||||| ||||||||||| || || || ||||| ||||||||||| || |
|
|
| T |
4266658 |
---atcacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaa |
4266754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 417
Target Start/End: Complemental strand, 4517259 - 4516889
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||| |||||||| || ||||||||||||||| ||||||| | | |||||| | |||||| |
|
|
| T |
4517259 |
tgatatgcagatgagagttatttgacaaatggatatttggacactaaagttgactggattccaggtttgggaaactttagactaaaggacctgcctgact |
4517160 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
||| || || || ||||| |||||||| ||| |||| ||| | ||||| | ||| |||| | |||| || | ||||| |||| ||||||| | |
|
|
| T |
4517159 |
ttataagaactactgatcctaatgatataatgataaaatttatcattgaagcggccgatagggttcatgaagctaattctattgttttcaatacttctga |
4517060 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatt |
343 |
Q |
| |
|
||||||||||| |||||||||||||||||| || || | | |||||| |||| |||||||||||||| ||||||| || || |||| ||| |||| |
|
|
| T |
4517059 |
tgaacttgagaatgatgtaataaatgctctatctattaagatcccttctatttatgccattggccctttaacttcatttttgaatcaaagtccgcaaa-- |
4516962 |
T |
|
| Q |
344 |
catcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
|| | |||| |||| ||||||| || |||||||||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
4516961 |
-ataacttggcttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaagga |
4516889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 444
Target Start/End: Complemental strand, 4586572 - 4586177
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgactat |
145 |
Q |
| |
|
|||||||||| |||||||||| ||||| ||||||||||| |||||||| || || |||||||| ||| | |||||||| | ||||| | |||||| | |
|
|
| T |
4586572 |
atatgcagataagagttatctgacaaacggatatttggacactaaagtggactgtattccaggattggagaactttcgactaaaggatttgcctgacttt |
4586473 |
T |
|
| Q |
146 |
atcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaatg |
245 |
Q |
| |
|
|| |||| || |||||||||||| || || | ||| | ||||| | || | | | ||| ||| ||||| || ||||||| ||||||| ||| |
|
|
| T |
4586472 |
ataaggattactgatccaaatgattcgatcatagaatttatcattgaaggcgcaggaacggctcacaaagactctgcttttatttttaatacttctgatg |
4586373 |
T |
|
| Q |
246 |
aacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattca |
345 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| ||| ||| |||||| |||| |||||||||||||| | ||||| ||||| |||| |||||||| | |
|
|
| T |
4586372 |
aacttgagaaggatgtaataaatgttctctccactaagttcccttctatttatgccattggccctttatcatcatttttaaatcaaagtccacaaa---a |
4586276 |
T |
|
| Q |
346 |
tcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|| || | |||||| || | || ||||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
4586275 |
ccacttagcatctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattt |
4586177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 444
Target Start/End: Complemental strand, 4506812 - 4506398
Alignment:
| Q |
27 |
attaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggtt |
126 |
Q |
| |
|
||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||| | | |
|
|
| T |
4506812 |
attaacttttgtaattatgatatgcagatgagagttatctaacaaatggatatttggacactaaggtagactggattccaggtttgagaaactttagact |
4506713 |
T |
|
| Q |
127 |
gaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactatt |
226 |
Q |
| |
|
||| || || |||| | ||| |||||||||||||| || ||| | | | || | ||| | ||||| | || || | | ||||| | |||| ||||| |
|
|
| T |
4506712 |
gaaagatcttcctgattttataaggacaacagatcctaacgatttgaggatagaatttattattgaagcagcagaaacatttcatagagcctcttctatt |
4506613 |
T |
|
| Q |
227 |
attttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaa |
326 |
Q |
| |
|
|| | ||||||| ||||||||||||||| |||| | |||||||| ||||||||||||||| ||| | |||||||||||| ||||||| ||| |
|
|
| T |
4506612 |
gttctcaatacttctaatgaacttgagagtaatgttctgaatgctcttgatattatgtttccttctctatacactattggccctttaacttcatttgtaa |
4506513 |
T |
|
| Q |
327 |
accaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatc |
426 |
Q |
| |
|
| |||| |||||||| |||| || | |||||| ||| || ||||||||||| |||||||| ||||| |||||||| ||||| || || ||| || |
|
|
| T |
4506512 |
atcaaagtccacaaa---atcagtttgcaactttagattcaaatctttggaaagaggatactaaatgtctcgaatggctggaatcaaaagaaccggcttc |
4506416 |
T |
|
| Q |
427 |
cgttgtttatgtgaattt |
444 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
4506415 |
tgttgtttatgtgaattt |
4506398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 46 - 411
Target Start/End: Complemental strand, 4458534 - 4458169
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagat---tggattccaggtttgaaaaactttcggttgaaggacattgctgac |
142 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||| | ||||| | | |||||| |||||||| |||||||| ||||||||||| || |||| |
|
|
| T |
4458534 |
atatgcagaagagagttatttaacaaatggatatttggacaaaaaagtcggtgactggatttcaggtttgcaaaactttaggttgaaggaccttcctgat |
4458435 |
T |
|
| Q |
143 |
tatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttca |
242 |
Q |
| |
|
| ||| | || |||||||| ||| || | ||| |||| ||| ||| || ||||| |||| | ||||| | |||| ||||| || | ||||||| |
|
|
| T |
4458434 |
tttataaagattacagatcctaataatttgatgataaaatttataaccgaagtggcagatagatgtcatagagcctcttctattgttatcaatacttctt |
4458335 |
T |
|
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
||||||||||||||||||| || ||| |||||| ||||||||| |||||| | ||| |||||||||| || |||| || |||| |||| |||||||| |
|
|
| T |
4458334 |
atgaacttgagagtgatgttatgaatactctctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaa- |
4458236 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatc |
411 |
Q |
| |
|
|||| |||| |||||| |||||| |||||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
4458235 |
--atcacttggcatctttaaattccaatctttggaaagaatatactaaatgtcttgagtggcttgaatc |
4458169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 417
Target Start/End: Complemental strand, 4623072 - 4622708
Alignment:
| Q |
50 |
gcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgactatatca |
149 |
Q |
| |
|
|||||| |||| ||||| |||||||||||| |||| || ||||||| || |||| || ||||| ||||||||||| ||||| | |||||| ||| | |
|
|
| T |
4623072 |
gcagataagagctatctgacaaatggatatctggacaccgaagtagactgtgttcctggattgaagaactttcggttaaaggatttgcctgactttataa |
4622973 |
T |
|
| Q |
150 |
ggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaatgaact |
249 |
Q |
| |
|
||| ||||| ||||||||| | ||| || | ||| | ||||| | ||| || | ||| ||| |||| |||||||||| ||||||| |||||||| |
|
|
| T |
4622972 |
ggattacagagccaaatgatgtcatggtagaatttctcattgaagcggcagaacgatttcacaaatcctctgctattatttttaatacttataatgaact |
4622873 |
T |
|
| Q |
250 |
tgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaa |
349 |
Q |
| |
|
||||| ||||| || ||||| |||| || ||||| || ||| | || || |||| |||||||||||||||||||| ||||||||||| | |||| |
|
|
| T |
4622872 |
tgagactgatgcgatgaatgcgctctattcaatgttcccatctttgtataccgttggacctttaccttcattattaaatcaaactccacata---atcac |
4622776 |
T |
|
| Q |
350 |
ttggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
|||| ||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
4622775 |
ttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaagga |
4622708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 242 - 444
Target Start/End: Complemental strand, 4598911 - 4598712
Alignment:
| Q |
242 |
aatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaa |
341 |
Q |
| |
|
||||||||||||| ||||||| | |||| ||||||| |||||| |||| | |||| |||||||||||||| |||| || ||||| |||| || ||||| |
|
|
| T |
4598911 |
aatgaacttgagaatgatgtattgaatgttctctccagtatgttcccttgtatttatgccattggccctttatcttcgtttttaaatcaaagtcaacaaa |
4598812 |
T |
|
| Q |
342 |
ttcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaa |
441 |
Q |
| |
|
||| |||| ||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||| || || || || |||||||||||||| |
|
|
| T |
4598811 |
agcat---ttggcatctttaggtaccaatctttggaaagaagataccaagtgtcttgactggcttgaatccaatgaaccaaggtctgttgtttatgtgaa |
4598715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 243 - 410
Target Start/End: Original strand, 4259547 - 4259711
Alignment:
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| |||||||| |||||| | || | ||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
4259547 |
atgaacttgagagtgatgtaatgaatgtgctctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccaca--- |
4259643 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaat |
410 |
Q |
| |
|
| |||| ||| || ||||||||||| ||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
4259644 |
taatcacctggcatcgttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaat |
4259711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 300 - 417
Target Start/End: Original strand, 4256074 - 4256188
Alignment:
| Q |
300 |
ccattggccctttaccttcattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttga |
399 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||| | ||| |||| || ||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4256074 |
ccattggacctttaccttcattattaaatcaaactccacatagtcac---ttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttga |
4256170 |
T |
|
| Q |
400 |
atggcttgaatccaagga |
417 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4256171 |
atggcttgaatccaagga |
4256188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 44 - 409
Target Start/End: Complemental strand, 3172679 - 3172317
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||| ||| || |||||||||||||||||||||||| | |||||| | || || ||| |
|
|
| T |
3172679 |
tgatatgcagatgagagttatgaaacaaatggatatttggacactatagttgactggattccaggtttgaaaaactttagattgaagcatcttcct-act |
3172581 |
T |
|
| Q |
144 |
at-atcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttca |
242 |
Q |
| |
|
| || |||| || |||||| |||||| | ||| || | ||| | ||||| || | |||||| ||| ||| ||| ||||| |||| || |||| | |
|
|
| T |
3172580 |
ttaattaggataaaagatcctaatgatttgatgatagaatttatgattgaagtaggagataaatgtcacaaagcttctgctattgttttcaacacttcta |
3172481 |
T |
|
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
||||||||||||||||||| || ||| |||| ||||| || |||||||| ||| | ||||| || || |||| || |||| |||| ||| |||| |
|
|
| T |
3172480 |
atgaacttgagagtgatgttatgaatactcttagttctatattcccttctctatacacaattggtccgttcgcttcgtttttaagtcaaagtccgcaaa- |
3172382 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaa |
409 |
Q |
| |
|
|||| |||| ||||||| ||| || |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3172381 |
--atcacttggcatctttagattctaatctttggaaagaagatactaaatgtcttgaatggcttgaa |
3172317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 44 - 444
Target Start/End: Complemental strand, 4481631 - 4481234
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||| | | |||||| |||||||||||||||||||||||| | ||||||||| || |||| | |
|
|
| T |
4481631 |
tgatatgcagatgagagttatttaacagatggatatttggacgcaacagtagactggattccaggtttgaaaaactttagattgaaggaccttcctgatt |
4481532 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
|| | | ||||||||| ||| | | || |||| | | || ||| ||| | |||||| ||| | | ||| || || || | ||||||| | |
|
|
| T |
4481531 |
taattaaggtaacagatcctaatcacttgatcataaaatataaaaatgaagtgacagataaatgtcaaagagcatctgcttttgttatcaatacttctta |
4481432 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatt |
343 |
Q |
| |
|
|||||||||||||||||| || ||| |||||| ||||| || |||||||| ||| ||||||| || || |||| || ||||| |||| ||||||| |
|
|
| T |
4481431 |
tgaacttgagagtgatgttatgaattctctctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaa--- |
4481335 |
T |
|
| Q |
344 |
catcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatt |
443 |
Q |
| |
|
|||| ||||| | |||| || || |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| |||| |
|
|
| T |
4481334 |
tatcacttggaaacattagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaatt |
4481235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 444
Target Start/End: Original strand, 4612910 - 4613309
Alignment:
| Q |
42 |
tttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctga |
141 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||| |||||||| || || |||| ||| ||| | |||||||| ||||||| || | | |
|
|
| T |
4612910 |
tttgacatgcagatgagagttatctgacaaacggatatttggatactaaagtggactgtattcaaggattgcagaactttcgactgaaggatcttcccgg |
4613009 |
T |
|
| Q |
142 |
ctatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttc |
241 |
Q |
| |
|
|||||| |||| ||||||||||||||| || || | ||| |||||| | || | | | ||| | | |||| || ||||||| ||||||| |
|
|
| T |
4613010 |
ctatataaggattacagatccaaatgattgcatagtacaatttacaattgaagcagcaggaagggctcacagagcctctgcttttatttttaatacttct |
4613109 |
T |
|
| Q |
242 |
aatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaa |
341 |
Q |
| |
|
||||||||||| | |||||||| |||| ||||||||| | ||| ||| | ||| | ||||| |||||| ||||| | |||| |||| |||||||| |
|
|
| T |
4613110 |
aatgaacttgaaaaggatgtaatgaatgttctctcctcgacgttccctaatatttgtgctattggtcctttatcttcacttttaagtcaaagtccacaaa |
4613209 |
T |
|
| Q |
342 |
ttcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaa |
441 |
Q |
| |
|
|||| |||| |||| || |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4613210 |
---atcacttggcaagtttaagtaccaatctttggaaagaagataccaagtgtcttgattggcttgaatccaaggaaccgaagtccgttgtttatgtgaa |
4613306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 444
Target Start/End: Complemental strand, 4470741 - 4470344
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| || | | |||| || ||||||||||||||||||||||| | |||||||| || |||| |
|
|
| T |
4470741 |
tgatatgcagatgagagttatctaatagatggatatttcgacattgaagttgactggattccaggtttgaaaaacttcagattgaaggattttcctgaaa |
4470642 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
|| | || || |||||| ||||| |||||||||| | | || ||| ||| | ||||| ||| | | ||| ||||| |||||||||||| || |
|
|
| T |
4470641 |
caataaagataaaagatcctaatgactttatgttaaaatatacaaatgaagtgacaaataaatgtcaaagagcttctgctattgttttgaatacttctaa |
4470542 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaatt |
343 |
Q |
| |
|
||||||||| |||||||| || |||| |||| ||||| || |||||||| ||| ||||||| || | |||| || ||||| |||| |||||||| | |
|
|
| T |
4470541 |
tgaacttgaaagtgatgttatgaatgaactctattctatattcccttctctatacgccattggtccactttcttcttttttaaatcaaagtccacaaaat |
4470442 |
T |
|
| Q |
344 |
catcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatt |
443 |
Q |
| |
|
|||| | | |||||| || ||| |||||||||||||||||||| |||||||| ||||||||||| || || || |||| ||||| ||||| |||| |
|
|
| T |
4470441 |
catc---tagcatctttaaatttcaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatt |
4470345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 4561253 - 4561045
Alignment:
| Q |
233 |
aatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaa |
332 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||| ||| |||||||| |||||||| ||| | ||||| || ||| |||| || |||| |||| |
|
|
| T |
4561253 |
aatacttctaatgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaa |
4561154 |
T |
|
| Q |
333 |
ctccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgt |
432 |
Q |
| |
|
|||||||| |||| ||| ||||||| | || |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||| |
|
|
| T |
4561153 |
gtccacaaa---atcacttgacatctttagactgtaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgt |
4561057 |
T |
|
| Q |
433 |
ttatgtgaattt |
444 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4561056 |
ttatgtaaattt |
4561045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 4575057 - 4574849
Alignment:
| Q |
233 |
aatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaa |
332 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||| ||| |||||||| |||||||| ||| | ||||| || ||| |||| || |||| |||| |
|
|
| T |
4575057 |
aatacttctaatgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaa |
4574958 |
T |
|
| Q |
333 |
ctccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgt |
432 |
Q |
| |
|
|||||||| || | ||| ||||||| || || |||||||||||||||||||| |||||||||||| ||||||| || || || ||||| ||||| |
|
|
| T |
4574957 |
gtccacaaa---atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgt |
4574861 |
T |
|
| Q |
433 |
ttatgtgaattt |
444 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4574860 |
ttatgtaaattt |
4574849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 4462088 - 4461988
Alignment:
| Q |
17 |
acttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaa |
116 |
Q |
| |
|
||||||||||||| ||||| || || |||||||||||||||| |||||||||| |||||||||| || ||| |||| || ||||||||||||||||||| |
|
|
| T |
4462088 |
acttcaagctattgacttttttaattatgatatgcagatgagatttatctaacagatggatatttagacactgaagttgactggattccaggtttgaaaa |
4461989 |
T |
|
| Q |
117 |
a |
117 |
Q |
| |
|
| |
|
|
| T |
4461988 |
a |
4461988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 444
Target Start/End: Original strand, 4489528 - 4489946
Alignment:
| Q |
17 |
acttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaa |
116 |
Q |
| |
|
||||||||||||| ||||| | || |||||||||||||||||| |||||||| ||||| ||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
4489528 |
acttcaagctattgacttttgaaattgtgatatgcagatgagagtaatctaacagatggaaatttggacactaaagttgaatggattccaggtttgaaaa |
4489627 |
T |
|
| Q |
117 |
actttcggttgaaggacattgctgactata-tcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaa |
215 |
Q |
| |
|
| || | |||||||| || |||| |||| | |||| || |||||| ||| || |||| | | |||||| | | | |||||| ||| | | |
|
|
| T |
4489628 |
gcattagtttgaaggattttcctga-tataataaggataaaagatcctgatg------tgataaaatataaaattgaagagacagataaatgtcaaagag |
4489720 |
T |
|
| Q |
216 |
actctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacc |
315 |
Q |
| |
|
||| || |||||||| ||||||| ||||||||||||||||||| || |||||||| ||||| || |||||| | ||| | |||||||| || | |
|
|
| T |
4489721 |
gctcaaccattattttcaatacttctaatgaacttgagagtgatgctatcaatgctcttagttctatattcccttctgtatacacaattggcccattttc |
4489820 |
T |
|
| Q |
316 |
ttcattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaag |
415 |
Q |
| |
|
||| || ||| | |||| |||| ||| |||| ||| | ||||||| || || |||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
4489821 |
ttcttttttagatcaaattccagaaa---atcacttgaaatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaa |
4489917 |
T |
|
| Q |
416 |
gagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|| || |||| ||||||||||| ||||| |
|
|
| T |
4489918 |
gaaccaggatctgttgtttatgtaaattt |
4489946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 4557744 - 4557666
Alignment:
| Q |
366 |
ccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
4557744 |
ccaatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattt |
4557666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 4571591 - 4571513
Alignment:
| Q |
366 |
ccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
4571591 |
ccaatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattt |
4571513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 401
Target Start/End: Complemental strand, 4568804 - 4568628
Alignment:
| Q |
222 |
ctattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcatt |
321 |
Q |
| |
|
||||| |||| ||||||| ||||||||||||||||||||| |||| ||||| || || | | |||||| ||||| |||||||||||||| |||| || |
|
|
| T |
4568804 |
ctattgttttcaatacttataatgaacttgagagtgatgtagtaaaggctctatctattaagatcccttctatttacgccattggccctttatcttcgtt |
4568705 |
T |
|
| Q |
322 |
attaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaat |
401 |
Q |
| |
|
|| || |||| ||| |||| | || |||| ||||||||||||||| |||||||||||||||| || |||||||||| |
|
|
| T |
4568704 |
tttgaatcaaaatccccaaa---agcacttggcttctttaggttccaatctttggaaagaagatatgaaatgtcttgaat |
4568628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 444
Target Start/End: Complemental strand, 4580172 - 4579973
Alignment:
| Q |
242 |
aatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaa |
341 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||| || |||| |||| | || | | |||||||||||| |||| || ||||| |||| |||| ||| |
|
|
| T |
4580172 |
aatgaacttgagaaggatgtaatgaatgctctctccactgtgttcccttgtattcatgctattggccctttatcttcgtttttaaatcaaagtccagaaa |
4580073 |
T |
|
| Q |
342 |
ttcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaa |
441 |
Q |
| |
|
||| ||| |||||| | |||| |||||||||||||||| ||||||||| | ||||||||||||||||| || || || |||||||||||||| |
|
|
| T |
4580072 |
accat---ttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttatgtgaa |
4579976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 441
Target Start/End: Complemental strand, 4626883 - 4626495
Alignment:
| Q |
50 |
gcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgactatatca |
149 |
Q |
| |
|
|||||||||| |||| | |||||||||||||| || || ||| ||||||| ||||| || ||| | ||||||||| |||||||| || | ||| ||| | |
|
|
| T |
4626883 |
gcagatgagacttatttgacaaatggatatttagacaccaaactagattgtattcccggattgcagaactttcggctgaaggaccttcttaactttataa |
4626784 |
T |
|
| Q |
150 |
ggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaatgaact |
249 |
Q |
| |
|
|||||||| |||| |||||| | ||| || | ||| | ||||| | ||| |||| | ||| | | || ||||| |||| || |||| | ||||||| |
|
|
| T |
4626783 |
ggacaacaaatcctaatgatgtcatggtagaatttctcattgaagcggcagatagatttcacagagcatcggctattgttttcaacacttacgatgaact |
4626684 |
T |
|
| Q |
250 |
tgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaa |
349 |
Q |
| |
|
|||| |||||||||| ||||| |||| |||| ||| | |||| | || ||||||| ||||| | ||| | || || | || |||||||| | || |
|
|
| T |
4626683 |
tgagggtgatgtaatgaatgcgctctattctacgttcctttctgtatataccattggacctttgcattctcttttgaatcgaagtccacaaa---accag |
4626587 |
T |
|
| Q |
350 |
ttggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaa |
441 |
Q |
| |
|
||| |||||||||||||| |||||||||||||| || || ||||||||||||||||||| |||||| || | || |||||||||||||| |
|
|
| T |
4626586 |
ttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctgttgtttatgtgaa |
4626495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 4484008 - 4484111
Alignment:
| Q |
19 |
ttcaagctattaactttgctacttttgatatgcagatgagagttatctaa-caaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
||||||| ||||||||| || || ||||||||| || |||||||||||| |||||| ||||||||| ||| ||||||| ||| |||||| ||||||||| |
|
|
| T |
4484008 |
ttcaagccattaacttttgtaattatgatatgcaaataagagttatctaagcaaatgtatatttggacactgaagtagactgggttccagatttgaaaaa |
4484107 |
T |
|
| Q |
118 |
cttt |
121 |
Q |
| |
|
|||| |
|
|
| T |
4484108 |
cttt |
4484111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 169
Target Start/End: Complemental strand, 4558065 - 4557938
Alignment:
| Q |
42 |
tttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctga |
141 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||| | |||||||| ||||||| | |||| |
|
|
| T |
4558065 |
tttgacatgtagatgagagttatctgacaaacggatatttggacactaaagtggattgtattccaggattgcagaactttcgactgaaggatctgcctga |
4557966 |
T |
|
| Q |
142 |
ctatatcaggacaacagatccaaatgat |
169 |
Q |
| |
|
|| ||| |||| |||||| |||||||| |
|
|
| T |
4557965 |
ctttataaggattacagatacaaatgat |
4557938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 4571912 - 4571831
Alignment:
| Q |
42 |
tttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcg |
123 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||| |||||||| || || || ||||| |||| |||||||| |
|
|
| T |
4571912 |
tttgatatgcagatgagagttatctgacaaacggatatttggacactaaagtggactgtatgccaggactgaagaactttcg |
4571831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 444
Target Start/End: Complemental strand, 4461744 - 4461664
Alignment:
| Q |
364 |
ttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||| ||||| ||||| |
|
|
| T |
4461744 |
ttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaattt |
4461664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 4561438 - 4561366
Alignment:
| Q |
48 |
atgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactt |
120 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |||| || ||||| || ||||| ||||||||||||||||| |
|
|
| T |
4561438 |
atgcagatgagagtgatctaacaaatgaatatctggacacgaaagttgactggatcccaggtttgaaaaactt |
4561366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 4575242 - 4575170
Alignment:
| Q |
48 |
atgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactt |
120 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||| || ||| | || ||||| ||||||||||||||||| |
|
|
| T |
4575242 |
atgcagatgagagtgatctaacaaatgaatatttggacacaaaaattgactggatcccaggtttgaaaaactt |
4575170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 4580981 - 4580915
Alignment:
| Q |
42 |
tttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccagg |
108 |
Q |
| |
|
|||||| | ||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||||||| |
|
|
| T |
4580981 |
tttgatgtacagatgacagttatctcacaaacggatatttggacactaaagtagattgtattccagg |
4580915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 4568970 - 4568906
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttg |
112 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
4568970 |
atatgcagatgag--ttatctgacaaatggatatttggtcactaaagttgactggattccaggtttg |
4568906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 4503915 - 4503988
Alignment:
| Q |
371 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| || || || |||| ||||||||||| ||||| |
|
|
| T |
4503915 |
ctttggaaagaagatactaaatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattt |
4503988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 4599106 - 4599029
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcg |
123 |
Q |
| |
|
|||| ||||||| ||| ||| ||||| |||||||||||||||||||||||||| ||||| || || |||||||||| |
|
|
| T |
4599106 |
atatacagatgatagtcgtctgacaaacggatatttggaaactaaagtagattgtattcctggactgcaaaactttcg |
4599029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 409
Target Start/End: Original strand, 4835518 - 4835571
Alignment:
| Q |
356 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaa |
409 |
Q |
| |
|
|||||||||||| | |||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
4835518 |
tctttaggttccgatctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 4259325 - 4259426
Alignment:
| Q |
21 |
caagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactt |
120 |
Q |
| |
|
||||||||| ||||| || || ||| | |||||| |||| |||||||||||||||||| |||| || |||||||| || |||| || ||||| ||||| |
|
|
| T |
4259325 |
caagctattgacttttgtaattatgacaagcagataagagctatctaacaaatggatatctggataccaaagtagactgtgttcctggattgaagaactt |
4259424 |
T |
|
| Q |
121 |
tc |
122 |
Q |
| |
|
|| |
|
|
| T |
4259425 |
tc |
4259426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 44 - 444
Target Start/End: Complemental strand, 405 - 4
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
405 |
tgatatgcagatgagagacatctaacaaatggatatttggaaacaaaagtcgagtggattccaggtttgaaaaactttcggttgaaggatgttgttgact |
306 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||| | | ||||||| |||||||||||||||||||| |
|
|
| T |
305 |
gtatcagaacaacggatccaaatgatattatgttagactttttaattgatgtcgctgataaagttcacagagactctacaattattttgaatactttcaa |
206 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctct-ctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
205 |
tgaacttgagagtgatgtaataaccgctctcctcctctttgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
106 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaat |
442 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| ||||||||||||||| |
|
|
| T |
105 |
tcatcaattagaatctttaggttccaacctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaat |
6 |
T |
|
| Q |
443 |
tt |
444 |
Q |
| |
|
|| |
|
|
| T |
5 |
tt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 44 - 444
Target Start/End: Complemental strand, 1675168 - 1674767
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgact |
143 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1675168 |
tgatatgcagatgagagacatctaacaaatggatatttggaaacaaaagtcgagtggattccaggtttgaaaaactttcggttgaaggatgttgttgact |
1675069 |
T |
|
| Q |
144 |
atatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaa |
243 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||| | | ||||||| |||||||||||||||||||| |
|
|
| T |
1675068 |
gtatcagaacaacggatccaaatgatattatgttagactttttaattgatgtcgctgataaagttcacagagactctacaattattttgaatactttcaa |
1674969 |
T |
|
| Q |
244 |
tgaacttgagagtgatgtaataaatgctct-ctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1674968 |
tgaacttgagagtgatgtaataaccgctctcctcctctttgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
1674869 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaat |
442 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| ||||||||||||||| |
|
|
| T |
1674868 |
tcatcaattagaatctttaggttccaacctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaat |
1674769 |
T |
|
| Q |
443 |
tt |
444 |
Q |
| |
|
|| |
|
|
| T |
1674768 |
tt |
1674767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 44 - 444
Target Start/End: Original strand, 20863037 - 20863434
Alignment:
| Q |
44 |
tgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgac- |
142 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||| || | |||||||| || || || |
|
|
| T |
20863037 |
tgatatacagatgagagttatctaacaaatggatatttggagactaaagttgatcggattccaggtttgcgaaatttcagactgaaggac-tttcttact |
20863135 |
T |
|
| Q |
143 |
tatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttca |
242 |
Q |
| |
|
| || ||||||||| |||| |||||| || || | ||| | ||||| || | |||| | ||| | | |||| ||||| |||| |||||||||| |
|
|
| T |
20863136 |
tgcataaggacaacaaatcctaatgattcgttgatagaatttctcattgaagtagtagatagatttcacagagcctctgctattgttttcaatactttca |
20863235 |
T |
|
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
|||| |||||||||||||| || |||| ||||| |||||||| |||||||| ||| ||||||||||||| ||| || ||||| |||| |||||| | |
|
|
| T |
20863236 |
atgagcttgagagtgatgttatgaatgttctctattctatgttcccttctctatacaccattggcccttttgtttcttttttaaatcaaagtccacaga- |
20863334 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaat |
442 |
Q |
| |
|
|||| |||| ||||||| ||| | |||||||||||||| ||| | ||||||| |||||||||||| || || ||| |||| |||| ||||| ||| |
|
|
| T |
20863335 |
--atcacttggcgtctttagattcaagtctttggaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaat |
20863432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 16685785 - 16685858
Alignment:
| Q |
371 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
16685785 |
ctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattt |
16685858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 16685482 - 16685544
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccagg |
108 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||| |||||||| || || |||||||| |
|
|
| T |
16685482 |
atatgcagatgagagttatctgacaaacggatatttggacactaaagtggactgtattccagg |
16685544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 444
Target Start/End: Complemental strand, 1282080 - 1281655
Alignment:
| Q |
18 |
cttcaagctattaactttgctacttttgatatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaa |
117 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1282080 |
cttcaagctattaacttttgtacttatgat-tgcagatgagagttatctaacaaatggatatttggaaacaaaagtagattggattccaggtttgaaaaa |
1281982 |
T |
|
| Q |
118 |
ctttcggttgaaggacattgctgactatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaac |
217 |
Q |
| |
|
|| ||||||||||| |||| ||||| ||||||||||| ||||| ||| |||||||||||| | || | ||||| |||| |||| || | ||| | || |
|
|
| T |
1281981 |
tttccggttgaaggatattgttgactttatcaggacaagagatcgaaacgatattatgttagaattctttattgaaatggcagatagagttaatagagac |
1281882 |
T |
|
| Q |
218 |
tctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacctt |
317 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| |
|
|
| T |
1281881 |
tctactattcttttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctataattccttctgtttacccgattggccctttacctt |
1281782 |
T |
|
| Q |
318 |
cattattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagga |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |
|
|
| T |
1281781 |
cattattaaaccaaactccacaaattcatcaattggattctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaagga |
1281682 |
T |
|
| Q |
418 |
gccgagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
1281681 |
accgagatctgttgtttatgtgaattt |
1281655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 46 - 444
Target Start/End: Complemental strand, 24103938 - 24103540
Alignment:
| Q |
46 |
atatgcagatgagagttatctaacaaatggatatttggaaactaaagtagattg---gattccaggtttgaaaaactttcggttgaaggacattgctgac |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || | |||||| | | | ||||||||||||| | |||||| ||||||||||| || |||| |
|
|
| T |
24103938 |
atatgcagatgagagttatctaacaaatggatatttagacaataaagttggtggcaggattccaggtttgcataactttaggttgaaggaccttcctgat |
24103839 |
T |
|
| Q |
143 |
tatatcaggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttca |
242 |
Q |
| |
|
| || |||| |||||||| |||||| | ||| |||| ||| | | || ||||| | | | ||| | | |||| ||||| || | ||||||| |
|
|
| T |
24103838 |
tttacaaggattacagatcctaatgatttgatgataaaatttattaccgaagtggcggtaagatgtcacagagcctcttctattgttatcaatacttcat |
24103739 |
T |
|
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
||||||||||||||||||| || |||||||||| ||||||||| |||||| | ||| |||||||||| || |||| || ||||| |||| |||||||| |
|
|
| T |
24103738 |
atgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaa- |
24103640 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaat |
442 |
Q |
| |
|
|||| |||| |||||| |||||| |||||||||||||||||||| |||||||| ||||||||||| || || || ||||| ||||||||||| ||| |
|
|
| T |
24103639 |
--atcacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaat |
24103542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 24107114 - 24107025
Alignment:
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaa |
332 |
Q |
| |
|
|||||||||||||||||||||| ||| | |||| |||||||| |||| | | || | ||||| |||||||||||||||||||| |||| |
|
|
| T |
24107114 |
atgaacttgagagtgatgtaatgaatacgctctattctatgttcccttttttatatactattggacctttaccttcattattaaatcaaa |
24107025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 50 - 444
Target Start/End: Original strand, 2918 - 3310
Alignment:
| Q |
50 |
gcagatgagagttatctaacaaatggatatttggaaactaaagtagattggattccaggtttgaaaaactttcggttgaaggacattgctgactatatca |
149 |
Q |
| |
|
|||||||| |||||| | |||| |||||||||||| | ||||||||||| ||||| ||| ||||||||||||| | |||||| || |||||| ||| | |
|
|
| T |
2918 |
gcagatgatagttatttgacaagtggatatttggacaacaaagtagattgtattccgggtatgaaaaactttcgactaaaggaccttcctgactttataa |
3017 |
T |
|
| Q |
150 |
ggacaacagatccaaatgatattatgttaaactttgtaattgatgtggctgataaagatcataaaaactctactattattttgaatactttcaatgaact |
249 |
Q |
| |
|
| |||| ||||| |||||| ||||| || | ||| | ||||| | || ||| || ||| | | ||| | ||| |||| || |||| |||||||| |
|
|
| T |
3018 |
gaacaaaagatctgaatgattttatggtagaatttttcattgaagcagcagatcaatttcacagagcttctgcaattgtttttaacacttataatgaact |
3117 |
T |
|
| Q |
250 |
tgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaa |
349 |
Q |
| |
|
||||||||||||| | ||||| ||| ||||||||| || || | ||| || || || |||||||||||||||| ||||||||||| | |||| |
|
|
| T |
3118 |
tgagagtgatgtactgaatgcgctccactctatgttcccatcattatacagtatcggaccattaccttcattattaagtcaaactccacata---atcac |
3214 |
T |
|
| Q |
350 |
ttggattcttt-aggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| || ||||||||||||||||| |
|
|
| T |
3215 |
ttggaatcttttaggttccaatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgag-tctgttgtttatgtgaattt |
3310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 444
Target Start/End: Original strand, 4060 - 4277
Alignment:
| Q |
221 |
actattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcat |
320 |
Q |
| |
|
|||||| |||| || |||| | ||||||||||||| | |||| | |||||||||| |||||||| |||||| | || ||||||| |||||| |||||| |
|
|
| T |
4060 |
actattgttttcaacacttacgatgaacttgagagcggtgtattgaatgctctctattctatgttcccttctttatataccattggacctttaacttcat |
4159 |
T |
|
| Q |
321 |
tattaaaccaaactccacaaattcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc |
420 |
Q |
| |
|
||||||| ||||||||||| | ||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| || |
|
|
| T |
4160 |
tattaaatcaaactccacataatcactaat------ctttaggttccaatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacc |
4253 |
T |
|
| Q |
421 |
-gagatccgttgtttatgtgaattt |
444 |
Q |
| |
|
||| || ||||||||||||||||| |
|
|
| T |
4254 |
tgag-tcggttgtttatgtgaattt |
4277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 416
Target Start/End: Complemental strand, 3087159 - 3086989
Alignment:
| Q |
243 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
342 |
Q |
| |
|
|||||||||||||||||||||| ||||| || | ||| |||| ||||| | || ||||||| || ||||||||| || |||| |||||| |||| | |
|
|
| T |
3087159 |
atgaacttgagagtgatgtaatgaatgcgctatattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcacata- |
3087061 |
T |
|
| Q |
343 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaagg |
416 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
3087060 |
--atcacttggcatctttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagg |
3086989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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