View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2934_high_5 (Length: 248)
Name: NF2934_high_5
Description: NF2934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2934_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 7418855 - 7419079
Alignment:
| Q |
18 |
tgttgatgttgttgtggccatatctcaaaacctttgttgtagatctcttcgtttctgaacaaaaactgattattattatttccactgttgttgttatttt |
117 |
Q |
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| T |
7418855 |
tgttgatgttgttgtggccatatctcaaaacctttgttgtagatctcttcgtttctgaacacaaactgattattattatttccactgttgttgttatttt |
7418954 |
T |
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| Q |
118 |
cttcttgttctcttgcttcttctttgcctcttccactgcttagagagaagaaaccagccatgttgttttgtaacacaaaaatgaaacgatcttccctaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7418955 |
cttcttgttctcttgcttcttctttgcctcttccactgcttagagagaagaaaccagccatgttgttttgtaacacaaaaatgaaacgatcttccctaat |
7419054 |
T |
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| Q |
218 |
tcagttatagttatagcaataacat |
242 |
Q |
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| T |
7419055 |
ttagttatagttatagcaataacat |
7419079 |
T |
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