View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2934_low_2 (Length: 373)
Name: NF2934_low_2
Description: NF2934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2934_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 361
Target Start/End: Original strand, 47743939 - 47744280
Alignment:
| Q |
18 |
attagtgttggttagattattttcttaagcttgtaattttaaatattttcccattctttcaaggatatttgtgaatattgtgatgtattcttagggtagt |
117 |
Q |
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| T |
47743939 |
attagtgttggttagattattttcttaagcttgtaattttaaatattttcccattctttcaaggatatttgtgaatattgtgatgtattcttagggtagt |
47744038 |
T |
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| Q |
118 |
tgaatactttctcaaatgacttctatatgttttctagtgcttttttaatgacacaacaagtttaannnnnnnactagttgnnnnnnngttttaacttgtg |
217 |
Q |
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| T |
47744039 |
tgaatactttctcaaatgacttctatatgttttctagtgc--ttttaatgacacaacaagtttaattttttttctagttgaaaaaaagtttaaacttgtg |
47744136 |
T |
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| Q |
218 |
agcaacagggttatttatgttggcagtcaagataatttgttattagtgtgattagctgacatacaaacatgctttttatattgaaaatttgaaatcagga |
317 |
Q |
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| T |
47744137 |
agcaacagggttatttatgttggcagtcaagataatttgttattagtgtgattagctgacatacaaacatgctttttatattgaaaatttgaaatcagga |
47744236 |
T |
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| Q |
318 |
cagataaacttcgagagccatgccttcttcatcttcacctgttc |
361 |
Q |
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| T |
47744237 |
cagataaacttcgagagccatgccttcttcatcttcacctgttc |
47744280 |
T |
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