View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2935-Insertion-13 (Length: 124)
Name: NF2935-Insertion-13
Description: NF2935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2935-Insertion-13 |
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| [»] chr2 (2 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 113; Significance: 1e-57; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 563512 - 563628
Alignment:
| Q |
8 |
ggttttcctgttgatgtacagcgagtgaggcatgatcttgtttccatatcaggtcctatacatagccatattattttgaactcctctgagacaaagtttc |
107 |
Q |
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| T |
563512 |
ggttttcctgttgatatacagcgagtgaggcatgatcttgtttccatatcaggtcctatacatagccatattattttgaactcctctgagacaaagtttc |
563611 |
T |
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| Q |
108 |
ctgcgactcacaattgc |
124 |
Q |
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| T |
563612 |
ctgcgactcacaattgc |
563628 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 513625 - 513509
Alignment:
| Q |
8 |
ggttttcctgttgatgtacagcgagtgaggcatgatcttgtttccatatcaggtcctatacatagccatattattttgaactcctctgagacaaagtttc |
107 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
513625 |
ggttttcctgttgatatacagcgagtgaggcatgatcttgtttccatatcaggtcctatacatagccatattattttgaactcctctgaaacaaagtttc |
513526 |
T |
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| Q |
108 |
ctgcgactcacaattgc |
124 |
Q |
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| T |
513525 |
ctgcgactcacaattgc |
513509 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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