View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2935-Insertion-8 (Length: 400)

Name: NF2935-Insertion-8
Description: NF2935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2935-Insertion-8
NF2935-Insertion-8
[»] chr2 (7 HSPs)
chr2 (8-400)||(12101050-12101442)
chr2 (8-400)||(5114893-5115286)
chr2 (171-313)||(20380939-20381081)
chr2 (205-313)||(25976605-25976713)
chr2 (219-288)||(15702107-15702176)
chr2 (219-305)||(21152356-21152442)
chr2 (223-288)||(15717417-15717482)
[»] chr1 (6 HSPs)
chr1 (20-400)||(11780763-11781143)
chr1 (23-349)||(10425213-10425539)
chr1 (8-349)||(13310888-13311231)
chr1 (46-328)||(1625469-1625751)
chr1 (234-313)||(30730687-30730766)
chr1 (71-315)||(21805376-21805620)
[»] chr5 (8 HSPs)
chr5 (37-400)||(19070042-19070405)
chr5 (23-400)||(5782546-5782923)
chr5 (72-382)||(17763241-17763551)
chr5 (205-349)||(11722491-11722635)
chr5 (205-391)||(21899689-21899875)
chr5 (37-315)||(13644292-13644570)
chr5 (37-288)||(35340140-35340391)
chr5 (23-142)||(11724114-11724233)
[»] chr3 (9 HSPs)
chr3 (44-390)||(19829604-19829950)
chr3 (23-388)||(16313226-16313589)
chr3 (23-388)||(18494220-18494583)
chr3 (125-310)||(14679721-14679906)
chr3 (192-315)||(3582226-3582349)
chr3 (23-79)||(16311128-16311184)
chr3 (23-79)||(18487912-18487968)
chr3 (23-79)||(18492122-18492178)
chr3 (232-280)||(20971973-20972021)
[»] chr4 (14 HSPs)
chr4 (46-384)||(33042003-33042343)
chr4 (57-379)||(8668476-8668802)
chr4 (205-376)||(10674740-10674911)
chr4 (205-376)||(10888380-10888551)
chr4 (37-304)||(15442920-15443187)
chr4 (29-315)||(17939282-17939568)
chr4 (205-400)||(1930216-1930411)
chr4 (263-349)||(10697303-10697389)
chr4 (263-349)||(10911072-10911158)
chr4 (37-279)||(39915163-39915405)
chr4 (37-322)||(7188285-7188570)
chr4 (205-267)||(10693664-10693726)
chr4 (205-267)||(10907430-10907492)
chr4 (8-145)||(34510700-34510838)
[»] chr6 (7 HSPs)
chr6 (37-400)||(11776842-11777212)
chr6 (23-142)||(14977072-14977191)
chr6 (232-336)||(13734685-13734789)
chr6 (37-288)||(33312633-33312884)
chr6 (37-314)||(18308168-18308445)
chr6 (225-313)||(3548447-3548535)
chr6 (26-134)||(14385141-14385249)
[»] chr8 (7 HSPs)
chr8 (43-400)||(17458607-17458960)
chr8 (48-379)||(21591336-21591667)
chr8 (198-379)||(14411513-14411694)
chr8 (198-349)||(23600121-23600272)
chr8 (27-157)||(33957715-33957845)
chr8 (223-288)||(18694085-18694150)
chr8 (75-178)||(15657189-15657292)
[»] scaffold0363 (1 HSPs)
scaffold0363 (198-379)||(7017-7198)
[»] chr7 (2 HSPs)
chr7 (198-349)||(3729273-3729424)
chr7 (205-313)||(20942402-20942510)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-388)||(61127-61508)
[»] scaffold0125 (2 HSPs)
scaffold0125 (75-310)||(31270-31505)
scaffold0125 (125-310)||(40631-40816)
[»] scaffold0093 (1 HSPs)
scaffold0093 (205-388)||(10290-10473)
[»] scaffold0061 (1 HSPs)
scaffold0061 (233-313)||(38063-38143)
[»] scaffold0017 (1 HSPs)
scaffold0017 (233-313)||(160636-160716)
[»] scaffold0238 (1 HSPs)
scaffold0238 (37-279)||(1314-1556)
[»] scaffold0490 (1 HSPs)
scaffold0490 (205-310)||(12071-12176)
[»] scaffold0292 (1 HSPs)
scaffold0292 (232-313)||(19448-19529)
[»] scaffold0062 (3 HSPs)
scaffold0062 (219-288)||(51019-51088)
scaffold0062 (219-288)||(63558-63627)
scaffold0062 (223-288)||(65975-66040)
[»] scaffold0416 (1 HSPs)
scaffold0416 (232-315)||(9234-9317)
[»] scaffold0021 (1 HSPs)
scaffold0021 (51-109)||(140665-140723)
[»] scaffold0063 (1 HSPs)
scaffold0063 (292-400)||(59511-59619)


Alignment Details
Target: chr2 (Bit Score: 349; Significance: 0; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 8 - 400
Target Start/End: Complemental strand, 12101442 - 12101050
Alignment:
Q  8 gtaaccatcgacagaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccc 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12101442 gtaaccgtcgacagaggagacattatgttcaatggagtaacagtgatggcaaaacaacggtctcctctcatattgcacttccaccttaaaagtgaagccc 12101343  T
Q  108 tcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcat 207  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  12101342 tcacgctccacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatccgtgcatagtggccaaaagtgtggtttcttgtcagtgcat 12101243  T
Q  208 caatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatac 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  12101242 caatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagtcgaatccaaagcgataa 12101143  T
Q  308 atgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12101142 atgagtctgcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccgacttgagattgattgtaccagctgccca 12101050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 8 - 400
Target Start/End: Complemental strand, 5115286 - 5114893
Alignment:
Q  8 gtaaccatcgaca-gaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagcc 106  Q
    ||||||| ||||| |||||||| || ||| |||| || ||||| ||||| ||||| ||  ||||||||||||||||||| || || || || ||||||||    
T  5115286 gtaaccaacgacatgaggagacgttgtgtccaatagaataacaatgatgacaaaataaaggtctcctctcatattgcacctcaactttgaaggcgaagcc 5115187  T
Q  107 ctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgca 206  Q
    ||| |  || ||||| || |||||||||||||||||||| || |||||||| || || ||    ||||| ||  |||||||  |||||| ||||||| ||    
T  5115186 ctctctttcgacaagtatttcatcataagctctcttagaaagatcaatgtcgacaagaattctagcataatgtccaaaagtacggtttcgtgtcggtcca 5115087  T
Q  207 tcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgata 306  Q
    || ||||| |||||||| |||||| ||||||| ||||| ||||| |||||||||| ||||||||| ||||||||||| ||||   |||||||||| ||||    
T  5115086 tctatgtcaatcggagtaccaaccgcacttgcaatttccttcaaggttctctcccaccaatactcctgcggtaactccaccaagcgaatccaaagagata 5114987  T
Q  307 catgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    |||||||||  |||||||| |||||||||| ||| |||||||| || || |   ||| ||| ||||||||||| || ||||| || ||||||||    
T  5114986 catgagtctgtttctgagccagatatttgaaatccttggtccattgtgataactttaacaagcccggcttgaggttaattgtgcctgctgccca 5114893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 313
Target Start/End: Complemental strand, 20381081 - 20380939
Alignment:
Q  171 gcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatact 270  Q
    ||||||||  |||||||||||||||  || ||  | || || ||||| || |||||||   ||||||||||||| |||||||||| ||||||||||||||    
T  20381081 gcatagtgaccaaaagtgtggtttcgagttggctcgtcgatatctataggggtgccaaatgcacttgctatttccttcaatgttcgctcccgccaatact 20380982  T
Q  271 cttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    ||||||||||||| ||||   ||||||||||||| ||||||||    
T  20380981 cttgcggtaactccaccaaacgaatccaaagcgaaacatgagt 20380939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 25976605 - 25976713
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||||||||| || || ||||| ||  |||| |||||||| ||||| ||||  |||||||||||||||||||||||||| ||||   |||||||||||||    
T  25976605 catcaatgtcaataggcgtgcccacggcactagctatttccttcaaggttcgttcccgccaatactcttgcggtaactccaccaagcgaatccaaagcga 25976704  T
Q  305 tacatgagt 313  Q
     ||||||||    
T  25976705 aacatgagt 25976713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 15702176 - 15702107
Alignment:
Q  219 ggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||||||| ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  15702176 ggagtgccaaccgcactttcaatttctttcaaagttctttcccgccaatactcatgcggtaactcaacca 15702107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 21152442 - 21152356
Alignment:
Q  219 ggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgat 305  Q
    |||||||||||| ||||| | ||||| ||||| ||||| |||||||||||||| ||| ||||||||||||   || |||||||||||    
T  21152442 ggagtgccaacctcactttcaatttctttcaaagttctttcccgccaatactcatgcagtaactcaaccaaacgagtccaaagcgat 21152356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 15717482 - 15717417
Alignment:
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||| ||||| | ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||    
T  15717482 tgccaaccgcactttcaatttctttcaaagttctttcccgtcaatactcatgcggtaactcaacca 15717417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 20 - 400
Target Start/End: Original strand, 11780763 - 11781143
Alignment:
Q  20 agaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctaca 119  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11780763 agaggagacattatgtccaatggagtaacagtgatggaaaaacaatagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctccaca 11780862  T
Q  120 aggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcg 219  Q
    ||||||||||| ||||||||||| || ||||||| ||||||||||||  ||||||||||| |||||||| |||||| ||||||| |||||||||||||||    
T  11780863 aggatctcatcgtaagctctctttgataggtcaaggtcaactaggattcgtgcatagtggccaaaagtgcggtttcatgtcggtccatcaatgtctatcg 11780962  T
Q  220 gagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttctt 319  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||    
T  11780963 gagtgccaaccacacttgctatttccttcaatgttctctcccaccaatactcttgcggtaattcaaccagtcgaatccaaagcaatacatgagtctgctt 11781062  T
Q  320 ctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    || |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  11781063 ctaagcaagatatttgaaatctttggtccattgagatagtcttatcaaacccggcttgagattgattgtacaagctgccca 11781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 349
Target Start/End: Original strand, 10425213 - 10425539
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    ||||||||| || ||||||||| ||||||| || ||||||||| ||||||||||||| || || ||||| || |||| ||| ||||| | ||| |||||     
T  10425213 ggagacattgtgctcaatggagaaacagtggtgacaaaacaacggtctcctctcataatgaacctccactttgaaagtgaatccctctcactcaacaaga 10425312  T
Q  123 atctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggag 222  Q
     | |||||||||||||||||||| || |||||||| ||||  ||   |||||||||  |||| ||  |||||| ||||||| |||| ||||| |||||||    
T  10425313 ttttcatcataagctctcttagaaagatcaatgtcgactaaaattcttgcatagtgaccaaaggtacggtttcgtgtcggtccatctatgtcgatcggag 10425412  T
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctg 322  Q
    | |||||| ||||||| ||||| ||||| ||||||||| || ||||||  ||||||||||| ||||   ||||||| |  ||||||||||| |  || ||    
T  10425413 taccaaccgcacttgcaatttccttcaaggttctctcctgcaaatacttctgcggtaactccaccaagcgaatccataaagatacatgagtatgtttttg 10425512  T
Q  323 agcaagatatttgacatctttggtcca 349  Q
    ||| |||||||||| ||||||||||||    
T  10425513 agccagatatttgaaatctttggtcca 10425539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 349
Target Start/End: Original strand, 13310888 - 13311231
Alignment:
Q  8 gtaaccatcgaca-gaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagcc 106  Q
    ||||||| ||||| |||||||| || ||| |||| || ||||||||||| ||||| ||  ||||||||||||||||||| || |  || || ||||||||    
T  13310888 gtaaccaacgacatgaggagacgttgtgtccaatagaataacagtgatgacaaaataaaggtctcctctcatattgcacctcaattttgaaggcgaagcc 13310987  T
Q  107 ctcacgctctacaaggatct-catcataagctctcttagacaggtcaatgtcaactaggatctgt-gcatagtggacaaaagtgtggtttcttgtcggtg 204  Q
    ||| |  || ||||| || | ||||||||||||||||||| || |||||||| || ||||  | | || || ||  |||||||  |||||| |||||||     
T  13310988 ctctctttcgacaagtattttcatcataagctctcttagaaagatcaatgtcgac-aggaattctagcgtaatgcccaaaagtacggtttcgtgtcggtc 13311086  T
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||  ||||| ||| |||| |||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| ||||   |||||||||| ||    
T  13311087 catttatgtcaatcagagtaccaaccgcacttgcaatttccttcaaggttctctcccgccaatactcatgcggtaactccaccaagcgaatccaaagaga 13311186  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
    ||||||||| |  |||||||| |||||||||| | ||||||||||    
T  13311187 tacatgagtttgtttctgagctagatatttgaaagctttggtcca 13311231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 46 - 328
Target Start/End: Original strand, 1625469 - 1625751
Alignment:
Q  46 aacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttaga 145  Q
    |||||||||| ||||||||| |||||| ||||||||| || ||||| || ||||||||||| || | ||| ||||| || ||||||||||||||||| ||    
T  1625469 aacagtgatgacaaaacaacggtctccgctcatattgaacctccactttgaaagcgaagccatctctctcaacaagaatttcatcataagctctctttga 1625568  T
Q  146 caggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttca 245  Q
     || ||||||| |||||  ||   ||| || ||| |||| ||  |||||| ||||||| |||||||||| ||||| || || |||||||||||||||||     
T  1625569 aagatcaatgttaactaaaattcttgcgtaatggccaaaggtacggtttcgtgtcggtccatcaatgtcaatcggggtacccaccacacttgctatttcc 1625668  T
Q  246 ttcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaag 328  Q
    |||||  |||||||| ||||||| || ||||||||||| || | | ||||||| || ||  |||| ||||  |||||||||||    
T  1625669 ttcaaaattctctcctgccaatattcctgcggtaactctacgaatcgaatccagagtgaagcatgggtctgtttctgagcaag 1625751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 30730766 - 30730687
Alignment:
Q  234 cttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||   ||||||||||||| ||||||||    
T  30730766 cttgcaatttccttcaaggttctctcccgccaatactcttgcggtaactccaccaaacgaatccaaagcgaaacatgagt 30730687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 315
Target Start/End: Complemental strand, 21805620 - 21805376
Alignment:
Q  71 cctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgt 170  Q
    ||||||||||||||| ||||| || || || |||||||| |  || ||||| || |||||||||   | ||| || ||||||||||| || || ||        
T  21805620 cctctcatattgcacatccactttgaaggcaaagccctctctttcaacaagaatttcatcataaatgcgcttggaaaggtcaatgtcgacaagaattcta 21805521  T
Q  171 gcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatact 270  Q
    ||||| ||  |||||||  ||||||| || ||| ||||||| || || ||||| |||||| |||| || ||||| ||||| ||||||||||| |||||||    
T  21805520 gcataatgcccaaaagtacggtttctagttggtccatcaatatcaattggagtcccaaccgcactagcaatttccttcaacgttctctcccgtcaatact 21805421  T
Q  271 cttgcggtaactcaaccagttgaatccaaagcgatacatgagtct 315  Q
    |||| |||| ||| ||||   | ||||||| ||||||||| ||||    
T  21805420 cttgtggtagctccaccaaacgtatccaaatcgatacatgtgtct 21805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 37 - 400
Target Start/End: Original strand, 19070042 - 19070405
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    |||| |||||||||||||||||||| ||| |||||| ||||||||| |  ||||| || ||||| ||||| || | ||| ||||| || |||||||| ||    
T  19070042 caatagagtaacagtgatggcaaaataacggtctccgctcatattggaactccactttgaaagcaaagccttctctctcaacaagaatttcatcatatgc 19070141  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    |||||| || || || ||||||||||  ||   |||||||||  |||||||| |||||| |||| || |||||||||| ||||| ||||||||| | |||    
T  19070142 tctctttgaaagatcgatgtcaactaaaattattgcatagtgcccaaaagtgcggtttcgtgtcagtccatcaatgtcaatcggggtgccaaccgcgctt 19070241  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttga 336  Q
    || || || ||||| |||||||||||||||||||||||| ||||||||||||   |||||||||| |||||||| ||||  ||||||| ||| |||||||    
T  19070242 gcgatctccttcaaagttctctcccgccaatactcttgcagtaactcaaccaagcgaatccaaagagatacatgtgtctgtttctgagaaaggtatttga 19070341  T
Q  337 catctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
     ||||||||||||||| || | |||||  |||||||||||||| |||| |||||| ||||||||    
T  19070342 aatctttggtccactgcgataatcttaataaacccggcttgaggttgactgtacctgctgccca 19070405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 400
Target Start/End: Original strand, 5782546 - 5782923
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    ||||||||| ||  |||| |||||||||||||||||||| ||| |||||| ||||||||| || ||||| || ||| | ||| | || | ||| |||||     
T  5782546 ggagacattgtgcccaatagagtaacagtgatggcaaaataacggtctccgctcatattggacctccactttgaaaacaaagtcttctctctcaacaaga 5782645  T
Q  123 atctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggag 222  Q
    || |||||||| |||||||| || || |||||||||||||  ||   |||||||||  ||||||||||||||| ||||||| |||||||||| || |||     
T  5782646 atttcatcatatgctctctttgaaagatcaatgtcaactaaaattcttgcatagtgcccaaaagtgtggtttcgtgtcggtccatcaatgtcaattggat 5782745  T
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctg 322  Q
    |||||||| | ||||| || || ||||| ||||||||||||||||| || |||||||||||||| |    ||||||||| |||||||| ||||  |||||    
T  5782746 tgccaaccgcgcttgcgatctccttcaaagttctctcccgccaatattcctgcggtaactcaactaagcaaatccaaagagatacatgtgtctgtttctg 5782845  T
Q  323 agcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    |  ||| ||||||| ||||||||||||||| || | ||| | ||||||||||||||| |||| |||||| ||||||||    
T  5782846 ataaaggtatttgaaatctttggtccactgcgataatctcaacaaacccggcttgaggttgactgtacctgctgccca 5782923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 72 - 382
Target Start/End: Complemental strand, 17763551 - 17763241
Alignment:
Q  72 ctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtg 171  Q
    ||||||||||| |||||||| || ||||| || || || ||||| || ||||| |||||||| |||||||| || |  ||||| |||||||  ||  |||    
T  17763551 ctctcatattggacttccactttgaaagcaaaaccatcccgctcaactaggatttcatcataggctctctttgataaatcaatatcaactaaaatgcgtg 17763452  T
Q  172 catagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactc 271  Q
    |||||||  ||||||| |||||   |||| |  |||||||||| || || || |||||||  ||||| ||||| |||||||||||||||| | |||||||    
T  17763451 catagtgcccaaaagtatggttctgtgtcagaccatcaatgtcgataggggttccaaccatgcttgcaatttccttcaatgttctctcccactaatactc 17763352  T
Q  272 ttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaaccc 371  Q
     ||||||||||||||||   |||||||||| || ||||| |||| ||| |||| ||| |||||||  || ||| |||||||||| |  |||| |||||||    
T  17763351 ctgcggtaactcaaccaagcgaatccaaagtgaaacatgtgtctgcttttgagaaaggtatttgaagtcgttgttccactgagataaccttaacaaaccc 17763252  T
Q  372 ggcttgagatt 382  Q
    || || |||||    
T  17763251 gggttaagatt 17763241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 349
Target Start/End: Complemental strand, 11722635 - 11722491
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||||||||| || || || || ||| ||||||||||||| |||||  |||||||||||||||| |||||||||||||| |||| | |||||||||| ||    
T  11722635 catcaatgtcaattggtgtacctaccgcacttgctatttccttcaaaattctctcccgccaatattcttgcggtaactccaccaatcgaatccaaagtga 11722536  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
     ||||||||||  || ||||||||||||||||  |||||||||||    
T  11722535 aacatgagtctgtttttgagcaagatatttgaagtctttggtcca 11722491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 205 - 391
Target Start/End: Original strand, 21899689 - 21899875
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    ||||||| || || ||||| |||||| |||| || ||||| |||||  ||||||||| |||||||||||| |||| ||| ||||   | |||||||| ||    
T  21899689 catcaatatcaattggagtcccaaccgcactagcaatttccttcaacattctctccctccaatactcttgtggtagctcgaccaaacgtatccaaagtga 21899788  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtacc 391  Q
    |||||| |||| |||||| |   ||||||||| |||||| ||||||||||||| || || ||||||||||||||| || ||||||||    
T  21899789 tacatgtgtctgcttctgcgtctgatatttgaaatctttagtccactgagagaatcgtagcaaacccggcttgaggttaattgtacc 21899875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 315
Target Start/End: Original strand, 13644292 - 13644570
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    ||||||||||||| ||||||||||||||  ||||||  |||||||| || |||||| | || || || || ||||| || ||||||| ||||||||| ||    
T  13644292 caatggagtaacaatgatggcaaaacaaaggtctccgttcatattgtacctccaccatgaacgcaaaaccatcacgttccacaaggacctcatcatatgc 13644391  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | ||||||| |  |||||||| ||||| ||  | ||||| ||  |||| |   | ||||| || ||| | || ||   ||| ||||| |||||  |||||    
T  13644392 tttcttagataaatcaatgtccactagaatgcgagcataatgaccaaaggaacgatttctagttggtccgtcgataaatataggagtaccaactgcactt 13644491  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtct 315  Q
    || |||||  |||| ||||||||||||||||||||||| |||| ||| ||||   |||||||||||||  |||||||||    
T  13644492 gcaatttccatcaaggttctctcccgccaatactcttgtggtagctctaccaaacgaatccaaagcgaagcatgagtct 13644570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 35340391 - 35340140
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    |||||||||| || ||||||||||||||  |||||| ||| ||||| | ||||||| | || || || || ||||| || ||||| | ||||||||| ||    
T  35340391 caatggagtagcattgatggcaaaacaaaggtctccgctcgtattgtatttccaccatgaacgcaaaaccgtcacgttccacaagaacctcatcatatgc 35340292  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || | ||||||||| || |  ||  | ||||| ||  ||||  |  | ||||| || ||| ||||||| || || || || |||||  |||||    
T  35340291 tttcttcgataagtcaatgtccaccaaaatgcgagcataatgaccaaagatacgatttctagttggtccatcaatatcaataggtgtaccaacggcactt 35340192  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    || ||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  35340191 gcaatttccttcaaggttctctcccgccaatactcttgcggtaactccacca 35340140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 11724233 - 11724114
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    |||||||| |||  |||| ||| | |||||||| |||||||||||||||| ||||||||| || || || || ||||| ||||| || ||||| |||||     
T  11724233 ggagacatcatgcgcaatagagaagcagtgatgacaaaacaacagtctccgctcatattgtacctcaactttgaaagcaaagccatcgcgctcaacaaga 11724134  T
Q  123 atctcatcataagctctctt 142  Q
    || |||||| ||| ||||||    
T  11724133 atttcatcaaaagttctctt 11724114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 6e-56; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 44 - 390
Target Start/End: Original strand, 19829604 - 19829950
Alignment:
Q  44 gtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctctta 143  Q
    |||||| |||||| |||| ||  |||||| ||||||||  || ||||| || ||||| ||||| || | ||| ||||| || |||||||| ||||||||     
T  19829604 gtaacaatgatggaaaaataatggtctccgctcatattagacctccacatttaaagcaaagccttctctctcaacaagaatttcatcatatgctctcttt 19829703  T
Q  144 gacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctattt 243  Q
    || || |||||||||||||  ||   |||||||||  ||||||||||||||| ||||||| |||||||||| ||||| |||||||||   ||||| || |    
T  19829704 gaaagatcaatgtcaactaaaattcttgcatagtgcccaaaagtgtggtttcgtgtcggtccatcaatgtcaatcggggtgccaaccgtgcttgcgatct 19829803  T
Q  244 cattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatcttt 343  Q
    | ||||| |||||||||||||||||||| ||||||||||||||||   |||||||||| |||||||| | ||  ||||||| ||| ||||||| ||||||    
T  19829804 ccttcaaagttctctcccgccaatactcctgcggtaactcaaccaagcgaatccaaagtgatacatgtgcctgtttctgagaaaggtatttgaaatcttt 19829903  T
Q  344 ggtccactgagagagtcttatcaaacccggcttgagattgattgtac 390  Q
    ||||||||  |||| ||| ||||||| ||||||||| |||| |||||    
T  19829904 ggtccactacgagaatctcatcaaactcggcttgaggttgaatgtac 19829950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 388
Target Start/End: Complemental strand, 16313589 - 16313226
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    ||||||||| ||  |||||||| ||||||| || ||||||||| |||||||||||||||  || ||||| || |||||||| ||||| |  || |||||     
T  16313589 ggagacattgtgcccaatggagaaacagtggtgacaaaacaacggtctcctctcatatttaacctccactttgaaagcgaatccctctc--tcaacaaga 16313492  T
Q  123 atctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggag 222  Q
    || |||||||||||||||||||| || |||||||| ||||  ||   | |||||||  |||| ||  |||||| ||||||  |||| ||||  |||||||    
T  16313491 atttcatcataagctctcttagaaagatcaatgtcgactaaaattcttacatagtgaccaaaggtacggtttcgtgtcggcccatctatgttaatcggag 16313392  T
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctg 322  Q
    | |||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| ||||    |||||||||  ||||||||||||  |||||    
T  16313391 taccaaccgcacttgcaatttccttcaaggttctctcccgccaatactcctgcggtaactccaccaagcaaatccaaagatatacatgagtctgtttctg 16313292  T
Q  323 agcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgt 388  Q
    ||| |||||||||| ||| ||| |||| || || |  |||| |||| |||||||||| || |||||    
T  16313291 agccagatatttgaaatccttgatccattgtgataaccttaacaaatccggcttgaggttaattgt 16313226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 388
Target Start/End: Complemental strand, 18494583 - 18494220
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    ||||||||| ||  |||||||| ||||||| || ||||||||| |||||||||||||||  || ||||| || |||||||| ||||| |  || |||||     
T  18494583 ggagacattgtgcccaatggagaaacagtggtgacaaaacaacggtctcctctcatatttaacctccactttgaaagcgaatccctctc--tcaacaaga 18494486  T
Q  123 atctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggag 222  Q
    || |||||||||||||||||||| || |||||||| ||||  ||   | |||||||  |||| ||  |||||| ||||||  |||| ||||  |||||||    
T  18494485 atttcatcataagctctcttagaaagatcaatgtcgactaaaattcttacatagtgaccaaaggtacggtttcgtgtcggcccatctatgttaatcggag 18494386  T
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctg 322  Q
    | |||||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| ||||    |||||||||  ||||||||||||  |||||    
T  18494385 taccaaccgcacttgcaatttccttcaaggttctctcccgccaatactcctgcggtaactccaccaagcaaatccaaagatatacatgagtctgtttctg 18494286  T
Q  323 agcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgt 388  Q
    ||| |||||||||| ||| ||| |||| || || |  |||| |||| |||||||||| || |||||    
T  18494285 agccagatatttgaaatccttgatccattgtgataaccttaacaaatccggcttgaggttaattgt 18494220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 125 - 310
Target Start/End: Original strand, 14679721 - 14679906
Alignment:
Q  125 ctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtg 224  Q
    ||||||||||||| |||| || || ||||| || ||||||||  | ||||||||  |||||||  |||| |  || ||  ||||||| ||||| || |||    
T  14679721 ctcatcataagctttctttgaaagatcaatatccactaggatgcgagcatagtgaccaaaagtacggttgcgagttggcccatcaatatctataggtgtg 14679820  T
Q  225 ccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatg 310  Q
    |||||  || |||| ||||| |||||||| |  |||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  14679821 ccaacggcaattgcaatttccttcaatgtacgttcccgccaatactcttgcggtaactcaaccaaacgaatccaaagcgatacatg 14679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 3582226 - 3582349
Alignment:
Q  192 tttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagtt 291  Q
    ||||| || ||| ||||||| || || || || |||||| ||||| | ||||| ||||| || |||||||||||||||||||||||||  || ||||       
T  3582226 tttctagttggtccatcaatatcaataggtgttccaaccgcactttcaatttccttcaaggtcctctcccgccaatactcttgcggtagttctaccaaac 3582325  T
Q  292 gaatccaaagcgatacatgagtct 315  Q
    | |||||||| |||||||||||||    
T  3582326 gtatccaaagtgatacatgagtct 3582349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 16311184 - 16311128
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcata 79  Q
    ||||||||| ||  |||||||| ||||||| || ||||||||| |||||||||||||    
T  16311184 ggagacattgtgcccaatggagaaacagtggtgacaaaacaacggtctcctctcata 16311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 18487968 - 18487912
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcata 79  Q
    ||||||||| ||  |||||||| ||||||| || ||||||||| |||||||||||||    
T  18487968 ggagacattgtgcccaatggagaaacagtggtgacaaaacaacggtctcctctcata 18487912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 18492178 - 18492122
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcata 79  Q
    ||||||||| ||  |||||||| ||||||| || ||||||||| |||||||||||||    
T  18492178 ggagacattgtgcccaatggagaaacagtggtgacaaaacaacggtctcctctcata 18492122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 20971973 - 20972021
Alignment:
Q  232 cacttgctatttcattcaatgttctctcccgccaatactcttgcggtaa 280  Q
    ||||||| ||||| ||||| || |||||||||||||| |||||||||||    
T  20971973 cacttgcaatttccttcaaggtcctctcccgccaatattcttgcggtaa 20972021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 46 - 384
Target Start/End: Original strand, 33042003 - 33042343
Alignment:
Q  46 aacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctct--acaaggatctcatcataagctctctta 143  Q
    |||||||||  ||||||||| |||||||||||||||| || ||||| || ||||  || | ||| | ||||  ||||| || ||||||||||||||||||    
T  33042003 aacagtgataacaaaacaacggtctcctctcatattgaacctccactttgaaagaaaatctctctctctctcaacaagaatttcatcataagctctctta 33042102  T
Q  144 gacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctattt 243  Q
    || || |||||||| ||||  ||   |||||||||  |||| ||   ||||| ||||||| |||| ||||| |||||||| ||||||  |||||| ||||    
T  33042103 gaaagatcaatgtcgactaaaattcttgcatagtgaccaaaggtacagtttcgtgtcggtccatctatgtcaatcggagtaccaaccggacttgcgattt 33042202  T
Q  244 cattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatcttt 343  Q
    | ||||| |||||||||||||||||||| ||||||||||| ||||   |||||||||| ||| |||| ||||  ||||||||  ||||||||| ||||||    
T  33042203 ccttcaaggttctctcccgccaatactcctgcggtaactccaccaagcgaatccaaagagatgcatgtgtctgtttctgagcctgatatttgaaatcttt 33042302  T
Q  344 ggtccactgagagagtcttatcaaacccggcttgagattga 384  Q
     |||||||| || | ||||| ||||||||||||||| ||||    
T  33042303 agtccactgtgataatcttaacaaacccggcttgaggttga 33042343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 57 - 379
Target Start/End: Original strand, 8668476 - 8668802
Alignment:
Q  57 caaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgt 156  Q
    ||||||||  |||||||||||||||| || ||||| || |||||||||||||| | ||| ||||| || |||| ||||||||||||||| || |||||||    
T  8668476 caaaacaaaggtctcctctcatattgaacctccactttgaaagcgaagccctctctctcaacaagaatttcattataagctctcttagaaagatcaatgt 8668575  T
Q  157 caactaggat-----ctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaat 251  Q
    | ||||  ||     || |||||||||  |||| ||  |||||  ||||||  |||| ||||| |||||||| |||||| ||||| | ||||| |||||     
T  8668576 cgactaaaattaattct-tgcatagtgaccaaaggtacggttttgtgtcggaccatctatgtcaatcggagtaccaaccgcacttacgatttccttcaaa 8668674  T
Q  252 gttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtccact 351  Q
    |||||||||||||||||||| ||||||||||| ||||   |||||||||| |||||||| || |  ||||||||| ||||||||| |||||||||||| |    
T  8668675 gttctctcccgccaatactcctgcggtaactccaccaagcgaatccaaagagatacatgtgtttgtttctgagcatgatatttgaaatctttggtccatt 8668774  T
Q  352 gagagagtcttatcaaacccggcttgag 379  Q
    | || |  |||| |||||| ||||||||    
T  8668775 gtgataaccttagcaaacctggcttgag 8668802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 376
Target Start/End: Complemental strand, 10674911 - 10674740
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||||||||| ||||| || || ||| ||||||||||||| |||||  |||||||||||||||| |||||||||||||| || | | |||||||||| ||    
T  10674911 catcaatgtcaatcggtgtacctaccgcacttgctatttccttcaaaattctctcccgccaatattcttgcggtaactccactaatcgaatccaaagtga 10674812  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggctt 376  Q
     |||||||| |  || ||||||||||||||||  ||||||||||| || || | ||||| |||||| |||||    
T  10674811 aacatgagtttgtttttgagcaagatatttgaagtctttggtccattgtgaaaatcttaacaaacctggctt 10674740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 205 - 376
Target Start/End: Complemental strand, 10888551 - 10888380
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||||||||| ||||| || || ||| ||||||||||||| |||||  |||||||||||||||| |||||||||||||| || | | |||||||||| ||    
T  10888551 catcaatgtcaatcggtgtacctaccgcacttgctatttccttcaaaattctctcccgccaatattcttgcggtaactccactaatcgaatccaaagtga 10888452  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggctt 376  Q
     |||||||| |  || ||||||||||||||||  ||||||||||| || || | ||||| |||||| |||||    
T  10888451 aacatgagtttgtttttgagcaagatatttgaagtctttggtccattgtgaaaatcttaacaaacctggctt 10888380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 304
Target Start/End: Original strand, 15442920 - 15443187
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    ||||| ||||||| ||||||||||||||  ||||||  |||||||| || |||||| | || || || || ||||| || ||||||| ||||||||| ||    
T  15442920 caatgtagtaacaatgatggcaaaacaaaggtctccattcatattgtacctccaccatgaacgcaaaaccatcacgttccacaaggacctcatcatatgc 15443019  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | ||||||| |  |||||||| ||||| ||  | ||||| ||  |||| | | | ||||| || ||| | || || ||||| ||||| |||||  |||||    
T  15443020 tttcttagataaatcaatgtccactagaatgcgagcataatgaccaaaggagcgatttctagttggtccgtcgatatctataggagtaccaactgcactt 15443119  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    || |||||  |||  ||||||||||||||||||||||| |||| ||| ||||   |||||||||||||    
T  15443120 gcaatttccatcagggttctctcccgccaatactcttgtggtagctccaccaaaagaatccaaagcga 15443187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 17939568 - 17939282
Alignment:
Q  29 attatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctca 128  Q
    ||||||| ||||||||||||| ||||||||||||||  ||||||  |||||||| || |||||| | || |  || || ||||| || ||||||| ||||    
T  17939568 attatgtccaatggagtaacaatgatggcaaaacaaaggtctccgttcatattgtacctccaccatgaacggaaaaccatcacgttccacaaggacctca 17939469  T
Q  129 tcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaa 228  Q
    ||||| ||| ||||||| |  |||||||| ||||| ||  | ||||| ||  |||| |   | ||||| || ||  | || || ||||| ||||| ||||    
T  17939468 tcatatgctttcttagataaatcaatgtccactagaatgcgagcataatgaccaaaggaacgatttctagttggcccgtcgatatctataggagtaccaa 17939369  T
Q  229 ccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtct 315  Q
    |  ||||||| |||||  |||  ||||||||||||||||||||||| |||| ||| ||||   |||||||||||||  |||||||||    
T  17939368 ctgcacttgcaatttccatcagggttctctcccgccaatactcttgtggtagctccaccaaacgaatccaaagcgaagcatgagtct 17939282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 205 - 400
Target Start/End: Original strand, 1930216 - 1930411
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    ||||||| || || ||||| |||||| | || || ||||| ||||| ||||||||||||||||||||||| |||| ||| ||||   | ||||||| |||    
T  1930216 catcaatatcaattggagtcccaaccgcgctagcaatttccttcaacgttctctcccgccaatactcttgtggtagctccaccaaacgtatccaaatcga 1930315  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    |||||| ||||  ||||  |   |||| |||| |||||| |||||||| |||| || || ||||||||||||| | || ||||||||  |||||||    
T  1930316 tacatgtgtctgtttctacgtttgatacttgaaatctttagtccactgtgagaatcgtagcaaacccggcttgtggttaattgtacctactgccca 1930411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 10697303 - 10697389
Alignment:
Q  263 ccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
    |||||| ||||||||||||||||||| | |||||||||| || |||||||| |  || ||||||||||||||||  |||||||||||    
T  10697303 ccaatattcttgcggtaactcaaccaatcgaatccaaagtgaaacatgagtttgtttttgagcaagatatttgaagtctttggtcca 10697389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 10911072 - 10911158
Alignment:
Q  263 ccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
    |||||| ||||||||||||||||||| | |||||||||| || |||||||| |  || ||||||||||||||||  |||||||||||    
T  10911072 ccaatattcttgcggtaactcaaccaatcgaatccaaagtgaaacatgagtttgtttttgagcaagatatttgaagtctttggtcca 10911158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 279
Target Start/End: Original strand, 39915163 - 39915405
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    ||||||||||||| |||||||||||||   |||||| ||||||||| ||||||||| | || || || || || || || ||||| ||||||||||| ||    
T  39915163 caatggagtaacaatgatggcaaaacagaggtctccgctcatattggacttccaccatgaacgcaaaaccatcgcgttcaacaagaatctcatcatatgc 39915262  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || |  |||||||| || |  ||  | ||||| ||  |||||||    ||||| || ||| ||||||| || ||  | ||  ||||| |||||    
T  39915263 tttcttcgataaatcaatgtctaccaaaatgcgagcataatgaccaaaagtacaatttctagttggtccatcaatatcaatacgtgtttcaaccgcactt 39915362  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggta 279  Q
    || ||||| ||||| || |||||||||||||||||||||||||    
T  39915363 gcaatttctttcaaggtcctctcccgccaatactcttgcggta 39915405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 322
Target Start/End: Complemental strand, 7188570 - 7188285
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    ||||||||||||| ||||||||||||||  || ||| ||||||||| | |||||||   || || || || || || || ||||| ||||||||||| ||    
T  7188570 caatggagtaacaatgatggcaaaacaaaggtttccgctcatattggatttccaccaggaacgcaaaaccatcgcgttcaacaagaatctcatcatatgc 7188471  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || |  |||||||| || |  ||  | ||||| ||  |||||||  | ||||| || ||| ||| ||| || || || || |||||| |||||    
T  7188470 tttcttcgataaatcaatgtccaccaaaatgcgagcataatgaccaaaagtacgatttctagttggtccataaatatcaataggtgttccaaccgcactt 7188371  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctg 322  Q
    || ||||| ||||| || |||||||||||||| |||||| |||  || ||||   | |||||||| |||||| |||||| ||||||    
T  7188370 gcaatttccttcaaggtcctctcccgccaatattcttgcagtagttctaccaaacgtatccaaagtgatacacgagtctgcttctg 7188285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 10693664 - 10693726
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaat 267  Q
    |||||||||| ||||| || || ||| ||||||||||||| |||||  |||||||||||||||    
T  10693664 catcaatgtcaatcggtgtacctaccgcacttgctatttccttcaaaattctctcccgccaat 10693726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 10907430 - 10907492
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaat 267  Q
    |||||||||| ||||| || || ||| ||||||||||||| |||||  |||||||||||||||    
T  10907430 catcaatgtcaatcggtgtacctaccgcacttgctatttccttcaaaattctctcccgccaat 10907492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 34510838 - 34510700
Alignment:
Q  8 gtaaccatcgaca-gaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagcc 106  Q
    ||||||| ||||| |||||| | || ||| |||| |||||||| |||||  |||| ||  ||||||||||||||||||| || || || || | ||||||    
T  34510838 gtaaccaacgacatgaggaggcgttgtgtccaatagagtaacaatgatgataaaataaaggtctcctctcatattgcacctcaactttgaatgtgaagcc 34510739  T
Q  107 ctcacgctctacaaggatctcatcataagctctcttaga 145  Q
    ||| |  |  ||||| || ||||||||||||||||||||    
T  34510738 ctctcttttgacaagtatttcatcataagctctcttaga 34510700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 400
Target Start/End: Original strand, 11776842 - 11777212
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||  || ||||| || ||||| ||||  || | ||| | ||| || |||||||| ||    
T  11776842 caatagagtaacagtgatggcaaaataacggtcccctctcatatttgacctccactttgaaagcaaagctttctctctcaagaagaatttcatcatatgc 11776941  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggag--------tgccaa 228  Q
    |||||| || || || |||| |||||  ||   |||||||||  ||||||||||||||| ||||||| |||||||||| || || |        ||||||    
T  11776942 tctctttgaaagatcgatgtgaactaaaattcttgcatagtgcccaaaagtgtggtttcgtgtcggtccatcaatgtcaattggggatttggggtgccaa 11777041  T
Q  229 ccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaag 328  Q
    || ||||||  || || ||||| ||||||||||||||||||||||||||||||||||  |    |||||||||||||||||| ||||  || |||| |||    
T  11777042 ccgcacttgtgatctccttcaaggttctctcccgccaatactcttgcggtaactcaataaaaaaaatccaaagcgatacatgtgtctg-ttatgagaaag 11777140  T
Q  329 atatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
     ||||||| ||||||||||||||| || | ||| | ||||||||||||||||||||||||||| ||||||||    
T  11777141 gtatttgaaatctttggtccactgcgataatctcaacaaacccggcttgagattgattgtacctgctgccca 11777212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 14977191 - 14977072
Alignment:
Q  23 ggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaagg 122  Q
    ||||| ||||||| |||| ||||||| |||||||||||||||| |||||||||||||||| |||||||| || |||| ||| ||||| ||||| ||||||    
T  14977191 ggagatattatgtccaatagagtaacggtgatggcaaaacaacggtctcctctcatattgaacttccactttgaaagtgaatccctctcgctccacaagg 14977092  T
Q  123 atctcatcataagctctctt 142  Q
    |||| |||||| ||||||||    
T  14977091 atcttatcatatgctctctt 14977072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 13734789 - 13734685
Alignment:
Q  232 cacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagata 331  Q
    ||||||||||||| |||||  ||||||| |||||||| || || |||| ||| |||| | |||||||||| || ||||||||||  ||||||||||||||    
T  13734789 cacttgctatttccttcaaaattctctctcgccaatattcctgtggtacctccaccaatcgaatccaaagtgaaacatgagtctgtttctgagcaagata 13734690  T
Q  332 tttga 336  Q
    |||||    
T  13734689 tttga 13734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 33312884 - 33312633
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    |||||||||| || ||||||||||||||  |||||| ||| ||||| | ||||||| | || || || || ||||| || ||||| | ||||||||| ||    
T  33312884 caatggagtagcaatgatggcaaaacaaaggtctccgctcgtattgtatttccaccatgaacgcaaaaccatcacgttccacaagaacctcatcatatgc 33312785  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || | ||||||||| || |  ||  | ||||| ||  |||| ||  | ||||| || ||| ||||||| || || || || |||||  |||||    
T  33312784 tttcttcgataagtcaatgtccaccaaaatgcgagcataatgaccaaaggtacgatttctagttggtccatcaatatcaataggcgtaccaacggcactt 33312685  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    || ||||| ||||| ||||||||||||||||||||||| |||||||| ||||    
T  33312684 gcaatttccttcaaggttctctcccgccaatactcttgtggtaactccacca 33312633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 314
Target Start/End: Original strand, 18308168 - 18308445
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    |||||||||| || ||||||||||||||  |||||| ||| ||||| | ||||||| | || || || || ||||| || ||||| | ||||||||| ||    
T  18308168 caatggagtagcaatgatggcaaaacaaaggtctccgctcgtattgtatttccaccatgaacgcaaaaccatcacgttccacaagaacctcatcatatgc 18308267  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || | ||||||||| || |  ||    ||||| ||  |||| ||  | ||||| || ||| ||||||| || || || || |||||  |||||    
T  18308268 tttcttcgataagtcaatgtccaccaaaatgcaagcataatgaccaaaggtacgatttctagttggtccatcaatatcaatgggtgtaccaacggcactt 18308367  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtc 314  Q
    || ||||| ||||| |||||||||| ||||||||||||||||||||| ||||   | ||||||| ||| |||||||||    
T  18308368 gcaatttccttcaaggttctctcccaccaatactcttgcggtaactccaccaaacgtatccaaatcgagacatgagtc 18308445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 3548447 - 3548535
Alignment:
Q  225 ccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    |||||| ||||||| ||||| ||||| || |||||||||||||||| ||||||||  || ||||   | |||||||| |||||||||||    
T  3548447 ccaaccgcacttgcaatttccttcaaggtcctctcccgccaatacttttgcggtagttctaccaaacgtatccaaagtgatacatgagt 3548535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 14385141 - 14385249
Alignment:
Q  26 gacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatc 125  Q
    |||||||||| |||||   ||||| ||||| ||||||||  | |  || |||||||||||||| || |||||||| || ||||| || || ||||||||     
T  14385141 gacattatgtacaatgacataacaatgatgacaaaacaaaggacgtctttcatattgcacttctacgttaaaagcaaaaccctcccgttcaacaaggatt 14385240  T
Q  126 tcatcataa 134  Q
    |||||||||    
T  14385241 tcatcataa 14385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 43 - 400
Target Start/End: Complemental strand, 17458960 - 17458607
Alignment:
Q  43 agtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctctt 142  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||  | |||| |||||| || | ||| ||||| || |||||| | | ||||||    
T  17458960 agtaacagtgatggaaaaacaacggtctcctctcatattgtacttccactgtgaaagtgaagccttctctctcgacaagaatttcatcacatgttctctt 17458861  T
Q  143 agacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatt 242  Q
     || |  || ||||||||||  |||  |||||||||  ||||||||  ||||||||| | | |||||||||| ||||| ||||||||| | ||||| |||    
T  17458860 tgatatatccatgtcaactaaaatcattgcatagtgaccaaaagtgcagtttcttgtagatccatcaatgtcaatcggggtgccaaccgcgcttgcgatt 17458761  T
Q  243 tcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctt 342  Q
    || ||| | ||||||||| ||||||| || ||||||||||||||||  |||||||||||||    ||| ||||  || |||| ||||||||||| || ||    
T  17458760 tccttcgaagttctctcctgccaatattcctgcggtaactcaaccaagtgaatccaaagcg----atgtgtctgtttttgagaaagatatttgaaatatt 17458665  T
Q  343 tggtccactgagagagtcttatcaaacccggcttgagattgattgtaccagctgccca 400  Q
    |||||||  |||| | ||||| ||||||||| ||||| |||| ||| || ||||||||    
T  17458664 tggtccaacgagataatcttaacaaacccggattgaggttgactgtgcctgctgccca 17458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 379
Target Start/End: Complemental strand, 21591667 - 21591336
Alignment:
Q  48 cagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagaca 147  Q
    |||||||  ||||||||| |||||| ||||||||| || || || || ||||| ||||| || | ||| ||||| || |||||| ||| |||||| || |    
T  21591667 cagtgataacaaaacaacggtctccgctcatattggacctcaactttgaaagcaaagccatctctctcaacaagaatttcatcaaaagttctctttgaaa 21591568  T
Q  148 ggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcatt 247  Q
    | |||||||| ||||  ||   |||||| ||  |||| ||  | ||||  |||||| |||||||||| ||||| || || ||||||||||||||||| ||    
T  21591567 gatcaatgtccactaaaattcttgcataatgtccaaaggtacgatttcgcgtcggtccatcaatgtcaatcggtgtacctaccacacttgctatttcctt 21591468  T
Q  248 caatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtc 347  Q
    |||  |||||  ||||||||| |||||||||||||| |||| | |||||||||| || ||||||||||  |||||||||||||||||||  |||||||||    
T  21591467 caaaattctcaaccgccaatattcttgcggtaactccaccaatcgaatccaaagtgaaacatgagtctgtttctgagcaagatatttgaagtctttggtc 21591368  T
Q  348 cactgagagagtcttatcaaacccggcttgag 379  Q
    || || || |  |||| |||||| ||||||||    
T  21591367 cattgtgaaaaccttaacaaacctggcttgag 21591336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 379
Target Start/End: Complemental strand, 14411694 - 14411513
Alignment:
Q  198 gtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatcc 297  Q
    |||||| |||||||||| ||||| || || ||| | ||||||||||| |||||  |||||||||||||||| || ||||||||||| |||| | ||||||    
T  14411694 gtcggtccatcaatgtcaatcggtgtacctaccgctcttgctatttccttcaaaattctctcccgccaatattcctgcggtaactccaccaatcgaatcc 14411595  T
Q  298 aaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgag 379  Q
    |||| || ||||||||||  |||||||||||||||||||  ||||||||||| || || |  |||| |||||| ||||||||    
T  14411594 aaagtgaaacatgagtctgtttctgagcaagatatttgaagtctttggtccattgtgaaaaccttaacaaacctggcttgag 14411513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 349
Target Start/End: Complemental strand, 23600272 - 23600121
Alignment:
Q  198 gtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatcc 297  Q
    |||||| ||||||| || ||||| || || | | ||||||||||||| | |||  |||| |||| |||||| || ||||||||||| ||||   ||||||    
T  23600272 gtcggtccatcaatttcaatcggtgtacctatcgcacttgctatttcttacaaaattctttcccaccaatattcctgcggtaactccaccaaacgaatcc 23600173  T
Q  298 aaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
    |||| || |||||| | |  |||||||||||||||||||  |||||||||||    
T  23600172 aaagtgaaacatgattttgtttctgagcaagatatttgaagtctttggtcca 23600121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 33957715 - 33957845
Alignment:
Q  27 acattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatct 126  Q
    ||||||||| |||||   ||||||||||||||||| | | ||||||| |||||||| ||||| |||||||| || || || || || || ||||| || |    
T  33957715 acattatgtccaatgacataacagtgatggcaaaagagcggtctcctttcatattgtacttcaaccttaaaggcaaaaccttcccgttccacaagaattt 33957814  T
Q  127 catcataagctctcttagacaggtcaatgtc 157  Q
    ||||||| ||||| ||||| | |||||||||    
T  33957815 catcataggctcttttagataagtcaatgtc 33957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 18694150 - 18694085
Alignment:
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||| ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  18694150 tgccaaccgcactttcaatttctttcaaagttctttcccgccaatactcatgcggtaactcaacca 18694085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 15657189 - 15657292
Alignment:
Q  75 tcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcat 174  Q
    |||||||||||||| || |||||||| |||||||| || || |||||||| ||||||||| | ||||| || |  |||||||| || |||||  ||||||    
T  15657189 tcatattgcacttcgacgttaaaagcaaagccctcccgttcaacaaggatttcatcataaaccctcttcgataaatcaatgtccacaaggatgcgtgcat 15657288  T
Q  175 agtg 178  Q
    ||||    
T  15657289 agtg 15657292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 7017 - 7198
Alignment:
Q  198 gtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatcc 297  Q
    |||||| |||||||||| ||||| || || ||| | ||||||||||| |||||  |||||||||||||||| || ||||||||||| |||| | ||||||    
T  7017 gtcggtccatcaatgtcaatcggtgtacctaccgcgcttgctatttccttcaaaattctctcccgccaatattcctgcggtaactccaccaatcgaatcc 7116  T
Q  298 aaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgag 379  Q
    |||| || ||||||||||  |||||||||||||||||||  ||||||||||| || || |  |||| |||||| ||||||||    
T  7117 aaagtgaaacatgagtctgtttctgagcaagatatttgaagtctttggtccattgtgaaaaccttaacaaacctggcttgag 7198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 349
Target Start/End: Original strand, 3729273 - 3729424
Alignment:
Q  198 gtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatcc 297  Q
    |||||| |||||||||| ||||| || || ||  |||||| |||||| |||||  |||||||||||||||| |||||||||||||| |||| | ||||||    
T  3729273 gtcggtccatcaatgtcaatcggtgtacctactgcacttgttatttccttcaaaattctctcccgccaatattcttgcggtaactccaccaatcgaatcc 3729372  T
Q  298 aaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtcca 349  Q
    |||| || ||||||||||  |||||||||||||||||||  |||||||||||    
T  3729373 aaagtgaaacatgagtctatttctgagcaagatatttgaagtctttggtcca 3729424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 20942402 - 20942510
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    |||||||||| || || ||||| ||  |||| |||||||| ||||| || |  |||||||||||||||||||||||||| ||||   |||||||||||||    
T  20942402 catcaatgtcaataggcgtgcccacggcactagctatttccttcaaggtacgttcccgccaatactcttgcggtaactccaccaagcgaatccaaagcga 20942501  T
Q  305 tacatgagt 313  Q
     ||||||||    
T  20942502 aacatgagt 20942510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 388
Target Start/End: Original strand, 61127 - 61508
Alignment:
Q  8 gtaaccatcgaca-gaggagacattatgttcaatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagcc 106  Q
    ||||||| ||||| || |||||||| ||| |||| || ||||||||||| ||||| ||  |   ||||||||||||||| || ||||| || ||||| ||    
T  61127 gtaaccaacgacatgatgagacattgtgtccaattgaataacagtgatgacaaaataatggaagcctctcatattgcacctcaaccttgaaggcgaaacc 61226  T
Q  107 ctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgca 206  Q
     || |  || || || || |||||||||  || ||| || || |||||||| || || ||  | ||||| ||  |||||||  ||||||  || ||| ||    
T  61227 ttctctttcgaccagaatttcatcataaattcgcttggaaagatcaatgtcgacaagaattcgagcataatgtccaaaagtacggtttcgagtgggtcca 61326  T
Q  207 tcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgata 306  Q
    ||||| || || ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| ||||   | |||||||||||||    
T  61327 tcaatatcaattggagtcccaaccgcacttgcaatttctttcaacgttctctcccgccaatactcttgtggtaactccaccaaacgtatccaaagcgata 61426  T
Q  307 catgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgt 388  Q
    |||| |||| ||| || |   |||| |||| ||| || ||||||||||||| || || ||||||||||||||| || |||||    
T  61427 catgtgtctgcttttgtgtctgatacttgaaatccttagtccactgagagaatcgtagcaaacccggcttgaggttaattgt 61508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 310
Target Start/End: Original strand, 31270 - 31505
Alignment:
Q  75 tcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcat 174  Q
    |||||||| | ||||||| |||| || || || || || || ||||| | ||||||||||||| |||| || || ||||| || ||||||||  | ||||    
T  31270 tcatattgaatttccaccataaatgcaaacccatcgcgttcgacaagaacctcatcataagctttcttcgaaagatcaatatccactaggatgcgagcat 31369  T
Q  175 agtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttg 274  Q
    ||||  ||||| |  ||||||  || ||  ||||||| ||||| || ||||||||  ||||||| ||||| |||||||| |  |||||||||||||||||    
T  31370 agtgaccaaaattacggtttcgagttggcccatcaatatctataggtgtgccaacggcacttgcaatttccttcaatgtacattcccgccaatactcttg 31469  T
Q  275 cggtaactcaaccagttgaatccaaagcgatacatg 310  Q
    ||||||||||||||   |||||||||||||||||||    
T  31470 cggtaactcaaccaaacgaatccaaagcgatacatg 31505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 310
Target Start/End: Original strand, 40631 - 40816
Alignment:
Q  125 ctcatcataagctctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtg 224  Q
    ||||||||||||| ||||  | || ||||| || ||||||||  | ||||||||  |||||||  ||||||  || ||  ||||||| ||||| || |||    
T  40631 ctcatcataagctttcttcaaaagatcaatatccactaggatgcgagcatagtgaccaaaagtacggtttcgagttggcccatcaatatctataggtgtg 40730  T
Q  225 ccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatg 310  Q
    |||||  ||||||| ||||| ||| |||| |  ||||||||||||||||||||||||| |||||   |||||||||||||||||||    
T  40731 ccaacggcacttgcaatttccttctatgtacattcccgccaatactcttgcggtaactgaaccaaacgaatccaaagcgatacatg 40816  T

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Target: scaffold0093 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 10473 - 10290
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    ||||||| || || ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| ||||  || |||||||||||    
T  10473 catcaatatcaattggagtcccaaccgcacttgcaatttctttcaacgttctctcccgccaatactcttgtggtaactccaccaaatgtatccaaagcga 10374  T
Q  305 tacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgt 388  Q
    |||||| |||| ||| ||     |||| |||| ||| || ||||||| ||||| || || ||||||||||||||| || |||||    
T  10373 tacatgtgtctacttttgtatctgatacttgaaatccttagtccactaagagaatcgtagcaaacccggcttgaggttaattgt 10290  T

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Target: scaffold0061 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 38143 - 38063
Alignment:
Q  233 acttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||| ||||||||    
T  38143 acttgctatttccttcaatgttcgctcccgccaatactcttgcggtaactccaccaaacgaatccaaagcgaaacatgagt 38063  T

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Target: scaffold0017 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 160636 - 160716
Alignment:
Q  233 acttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||| ||||||||    
T  160636 acttgctatttccttcaatgttcgctcccgccaatactcttgcggtaactccaccaaacgaatccaaagcgaaacatgagt 160716  T

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Target: scaffold0238 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 279
Target Start/End: Original strand, 1314 - 1556
Alignment:
Q  37 caatggagtaacagtgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctcacgctctacaaggatctcatcataagc 136  Q
    ||||||||||||| |||||||||||||   |||||| ||||||||| | ||||| | | || || ||||| || || || ||||| ||||||||||| ||    
T  1314 caatggagtaacaatgatggcaaaacagaggtctccactcatattggatttccatcatgaacgcaaagccatcgcgttcaacaagaatctcatcatatgc 1413  T
Q  137 tctcttagacaggtcaatgtcaactaggatctgtgcatagtggacaaaagtgtggtttcttgtcggtgcatcaatgtctatcggagtgccaaccacactt 236  Q
    | |||| || |  |||||||| || |  ||  | ||||| ||  |||||||  | ||||| || ||| ||||||| || ||||| || |||||| |||||    
T  1414 tttcttcgataaatcaatgtccaccaaaatgcgagcataatgaccaaaagtacgatttctagttggtccatcaatatcaatcggtgttccaaccgcactt 1513  T
Q  237 gctatttcattcaatgttctctcccgccaatactcttgcggta 279  Q
    || ||||| ||||| || |||||||||||||||||||||||||    
T  1514 gcaatttccttcaaggtcctctcccgccaatactcttgcggta 1556  T

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Target: scaffold0490 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 12176 - 12071
Alignment:
Q  205 catcaatgtctatcggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcga 304  Q
    ||||||| ||||| || ||||| ||  ||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||   ||||||||| |||    
T  12176 catcaatatctataggcgtgcctacggcacttgcaatttccttcaatgtacgctcccgccaatactcttgcggtaactcaaccaaacgaatccaaaacga 12077  T
Q  305 tacatg 310  Q
    ||||||    
T  12076 tacatg 12071  T

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Target: scaffold0292 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 19529 - 19448
Alignment:
Q  232 cacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagt 313  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||   ||||||||||||| ||||||||    
T  19529 cacttgcaatttccttcaaggttctctcccgccaatattcttgcggtaactccaccaagcgaatccaaagcgaaacatgagt 19448  T

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Target: scaffold0062 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 51088 - 51019
Alignment:
Q  219 ggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||||||| ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  51088 ggagtgccaaccgcactttcaatttctttcaaagttctttcccgccaatactcatgcggtaactcaacca 51019  T

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Target: scaffold0062; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 63627 - 63558
Alignment:
Q  219 ggagtgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||||||| ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||||||||    
T  63627 ggagtgccaaccgcactttcaatttctttcaaagttctttcccgccaatactcatgcggtaactcaacca 63558  T

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Target: scaffold0062; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 66040 - 65975
Alignment:
Q  223 tgccaaccacacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaacca 288  Q
    |||||||| ||||| | ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||    
T  66040 tgccaaccgcactttcaatttctttcaaagttctttcccgtcaatactcatgcggtaactcaacca 65975  T

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Target: scaffold0416 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 9317 - 9234
Alignment:
Q  232 cacttgctatttcattcaatgttctctcccgccaatactcttgcggtaactcaaccagttgaatccaaagcgatacatgagtct 315  Q
    |||||||||| || ||||| || |||||||||||||||||||||||||| |||| ||   | ||||||||||| || |||||||    
T  9317 cacttgctatctccttcaaagtcctctcccgccaatactcttgcggtaattcaatcaaccgtatccaaagcgaaacgtgagtct 9234  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 140665 - 140723
Alignment:
Q  51 tgatggcaaaacaacagtctcctctcatattgcacttccaccttaaaagcgaagccctc 109  Q
    ||||||||||||||  |||| |||||||| || |||||||||||||||||||| |||||    
T  140665 tgatggcaaaacaaaggtcttctctcatactgaacttccaccttaaaagcgaacccctc 140723  T

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Target: scaffold0063 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 59619 - 59511
Alignment:
Q  292 gaatccaaagcgatacatgagtcttcttctgagcaagatatttgacatctttggtccactgagagagtcttatcaaacccggcttgagattgattgtacc 391  Q
    |||||||||| || ||||||||||  || ||||||||||||||||  ||||||||||| || || |    || ||||||||||||||| |||| ||| ||    
T  59619 gaatccaaagtgaaacatgagtctgtttatgagcaagatatttgaagtctttggtccattgtgaaaactgtaacaaacccggcttgaggttgactgtgcc 59520  T
Q  392 agctgccca 400  Q
     ||||||||    
T  59519 tgctgccca 59511  T

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