View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2937_low_8 (Length: 266)
Name: NF2937_low_8
Description: NF2937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2937_low_8 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9923821 - 9924006
Alignment:
| Q |
1 |
tggaaaatggaatataagatcccactatcttcttagtttaatagttaaactcaaaagaaaacattgataagtagaaattctaatcattttacttatcatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
9923821 |
tggaaaatggaatataagatcccactatcttcttagtttaatagttaaactcaaaagaaaacattgataagtagaaattctaataattt-acttatcatt |
9923919 |
T |
|
| Q |
101 |
catcttttgctaagacattgacaagtagactccaaataaccaaacaaatcccatttttctgactcaactctatatataatagttgca |
187 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9923920 |
catcttttgctaagacattgacaagtagactccaaataaccaaacaaatcccatttttctgactcaactctatatataatagttgca |
9924006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University