View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2940_low_5 (Length: 273)
Name: NF2940_low_5
Description: NF2940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2940_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 44682873 - 44682626
Alignment:
| Q |
11 |
atgaacccccggaccccactttattattacggacacaactgctgcgttctttgcccaaactctgcctcatcttggacaagttaaatgcatcaacatttac |
110 |
Q |
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| T |
44682873 |
atgaacccccggaccccactttattattacggacacaactgctgcgttctttgcccaaactctgcctcatcttggacaagttaaatgcatcaacatttac |
44682774 |
T |
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| Q |
111 |
attattaaacacataatttcactatgtttttgcaataaaataaggatgtcaatttgaaaaatgaaatagtaggtacaatttctcgtgccttgcttgtata |
210 |
Q |
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| T |
44682773 |
attattaaacacataatgtcattatgtttttgcaataaaataaggatgtcaatttgaaaaatgaaatagtaggtacaatttctcgtgccttacttgtata |
44682674 |
T |
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| Q |
211 |
ttatcatcaagtgaagacttgattaaatcatctcaatacgtttaaatt |
258 |
Q |
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| T |
44682673 |
ttatcatcaagtgaagacttgattaaatcatctcaatacgtttaaatt |
44682626 |
T |
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