View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2941_low_1 (Length: 627)

Name: NF2941_low_1
Description: NF2941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2941_low_1
NF2941_low_1
[»] chr3 (81 HSPs)
chr3 (472-617)||(53190759-53190904)
chr3 (473-617)||(27899081-27899225)
chr3 (473-620)||(21348723-21348870)
chr3 (473-620)||(51684610-51684757)
chr3 (473-617)||(2226152-2226296)
chr3 (471-617)||(46112485-46112631)
chr3 (473-610)||(54898437-54898574)
chr3 (476-620)||(42279510-42279654)
chr3 (473-620)||(30599915-30600062)
chr3 (471-620)||(17515308-17515457)
chr3 (475-620)||(43765139-43765284)
chr3 (473-617)||(41977750-41977894)
chr3 (486-617)||(35905712-35905843)
chr3 (473-620)||(23293167-23293314)
chr3 (476-617)||(2377032-2377173)
chr3 (503-620)||(46197750-46197867)
chr3 (473-620)||(3152215-3152362)
chr3 (473-620)||(44794208-44794354)
chr3 (479-599)||(2660218-2660338)
chr3 (472-562)||(23291569-23291659)
chr3 (538-620)||(48830803-48830885)
chr3 (470-562)||(611222-611314)
chr3 (474-562)||(2378983-2379071)
chr3 (471-562)||(38193510-38193601)
chr3 (551-617)||(7884873-7884939)
chr3 (473-562)||(41979352-41979441)
chr3 (473-562)||(44267981-44268070)
chr3 (547-620)||(44276193-44276266)
chr3 (473-562)||(46308807-46308896)
chr3 (473-562)||(53094273-53094362)
chr3 (470-562)||(3150249-3150341)
chr3 (476-562)||(42282473-42282559)
chr3 (473-562)||(54900074-54900163)
chr3 (473-617)||(600725-600853)
chr3 (472-562)||(46310436-46310526)
chr3 (519-620)||(19987591-19987692)
chr3 (483-608)||(23888761-23888886)
chr3 (473-562)||(30598337-30598426)
chr3 (473-562)||(35903825-35903914)
chr3 (473-562)||(38191895-38191984)
chr3 (473-562)||(53187742-53187831)
chr3 (483-589)||(23774162-23774268)
chr3 (476-562)||(54412547-54412633)
chr3 (473-534)||(7884927-7884988)
chr3 (473-562)||(44795890-44795979)
chr3 (473-562)||(46609149-46609238)
chr3 (473-562)||(46611303-46611392)
chr3 (483-608)||(48633887-48634012)
chr3 (473-554)||(51686402-51686483)
chr3 (470-562)||(21350605-21350697)
chr3 (483-608)||(2977318-2977443)
chr3 (483-596)||(45898349-45898462)
chr3 (473-554)||(48829356-48829437)
chr3 (473-562)||(53092623-53092712)
chr3 (478-562)||(2661908-2661992)
chr3 (483-618)||(40508890-40509025)
chr3 (473-562)||(46114105-46114195)
chr3 (473-562)||(7883328-7883417)
chr3 (483-608)||(18430260-18430385)
chr3 (483-592)||(41021008-41021117)
chr3 (510-609)||(45257208-45257307)
chr3 (529-607)||(1845840-1845918)
chr3 (545-610)||(5133068-5133133)
chr3 (473-562)||(28626411-28626500)
chr3 (483-608)||(31887441-31887566)
chr3 (483-562)||(17516973-17517052)
chr3 (510-593)||(33113184-33113267)
chr3 (473-562)||(27897151-27897239)
chr3 (476-561)||(35572525-35572610)
chr3 (551-608)||(54092764-54092821)
chr3 (529-608)||(33852659-33852738)
chr3 (483-562)||(48635375-48635454)
chr3 (556-610)||(5125884-5125938)
chr3 (538-596)||(24382894-24382952)
chr3 (556-610)||(41623735-41623789)
chr3 (435-468)||(26282629-26282662)
chr3 (470-503)||(43767075-43767108)
chr3 (510-562)||(1847647-1847699)
chr3 (538-610)||(23876965-23877037)
chr3 (548-596)||(25535250-25535298)
chr3 (514-562)||(33051467-33051515)
[»] chr8 (64 HSPs)
chr8 (472-620)||(13282477-13282625)
chr8 (473-617)||(8609787-8609931)
chr8 (473-620)||(41042581-41042728)
chr8 (471-620)||(7745109-7745258)
chr8 (473-617)||(13108336-13108480)
chr8 (473-617)||(38547228-38547372)
chr8 (476-620)||(26242311-26242455)
chr8 (476-620)||(42941777-42941921)
chr8 (473-620)||(13486096-13486243)
chr8 (473-620)||(22272334-22272483)
chr8 (476-620)||(41825641-41825785)
chr8 (473-620)||(27691154-27691301)
chr8 (474-620)||(5036446-5036596)
chr8 (516-620)||(9673162-9673266)
chr8 (470-562)||(22273891-22273983)
chr8 (473-562)||(42943426-42943515)
chr8 (473-620)||(33708801-33708947)
chr8 (473-562)||(27692837-27692926)
chr8 (473-554)||(34681074-34681155)
chr8 (525-620)||(40339677-40339772)
chr8 (473-554)||(26238726-26238807)
chr8 (472-562)||(601704-601794)
chr8 (473-562)||(33762713-33762802)
chr8 (473-562)||(38548831-38548920)
chr8 (470-562)||(29239187-29239279)
chr8 (473-562)||(5038062-5038150)
chr8 (473-562)||(13106804-13106893)
chr8 (473-562)||(29237151-29237240)
chr8 (473-562)||(33761069-33761158)
chr8 (473-562)||(35509214-35509303)
chr8 (474-562)||(33707207-33707295)
chr8 (473-620)||(27406894-27407041)
chr8 (483-596)||(31821428-31821541)
chr8 (473-562)||(35510819-35510908)
chr8 (473-562)||(41040720-41040809)
chr8 (471-554)||(41823888-41823971)
chr8 (473-562)||(8608237-8608327)
chr8 (476-562)||(13283995-13284081)
chr8 (472-562)||(13484544-13484634)
chr8 (491-620)||(15305815-15305944)
chr8 (473-562)||(15308261-15308350)
chr8 (491-620)||(15486184-15486313)
chr8 (473-562)||(15488630-15488719)
chr8 (473-554)||(43262145-43262226)
chr8 (510-592)||(31201148-31201230)
chr8 (510-596)||(42897775-42897861)
chr8 (483-610)||(9184393-9184520)
chr8 (509-596)||(33750385-33750472)
chr8 (529-596)||(37526024-37526091)
chr8 (476-562)||(9671980-9672066)
chr8 (483-609)||(28433704-28433830)
chr8 (485-562)||(3151969-3152046)
chr8 (483-596)||(32822371-32822484)
chr8 (473-524)||(600760-600811)
chr8 (483-590)||(33160155-33160262)
chr8 (510-596)||(1320654-1320740)
chr8 (510-608)||(8654537-8654634)
chr8 (476-562)||(27404213-27404299)
chr8 (483-596)||(462371-462484)
chr8 (548-613)||(37801541-37801606)
chr8 (483-608)||(38882786-38882911)
chr8 (551-610)||(15145749-15145808)
chr8 (483-562)||(44620671-44620750)
chr8 (549-610)||(40020622-40020683)
[»] chr5 (45 HSPs)
chr5 (473-617)||(17574318-17574462)
chr5 (473-617)||(7267843-7267987)
chr5 (473-620)||(36057590-36057737)
chr5 (470-620)||(34327632-34327782)
chr5 (473-617)||(30468260-30468404)
chr5 (472-617)||(2179786-2179931)
chr5 (476-620)||(18624985-18625129)
chr5 (473-616)||(8539675-8539818)
chr5 (472-620)||(2854304-2854451)
chr5 (473-620)||(24541188-24541336)
chr5 (473-562)||(12738736-12738825)
chr5 (473-562)||(12801559-12801648)
chr5 (473-562)||(30463900-30463989)
chr5 (472-620)||(29621758-29621906)
chr5 (473-562)||(8541271-8541360)
chr5 (473-620)||(42473584-42473731)
chr5 (470-562)||(34328827-34328919)
chr5 (476-620)||(40780553-40780697)
chr5 (472-562)||(2852885-2852975)
chr5 (473-562)||(7269446-7269535)
chr5 (473-562)||(32134231-32134320)
chr5 (473-562)||(28813765-28813856)
chr5 (483-596)||(18728603-18728716)
chr5 (471-562)||(21842992-21843083)
chr5 (483-596)||(35395343-35395456)
chr5 (473-562)||(40782211-40782300)
chr5 (475-562)||(17577935-17578022)
chr5 (476-562)||(28822090-28822176)
chr5 (473-562)||(29620138-29620227)
chr5 (483-596)||(32087524-32087637)
chr5 (483-564)||(43492131-43492212)
chr5 (470-560)||(41493841-41493931)
chr5 (483-596)||(43318061-43318174)
chr5 (483-602)||(15459184-15459303)
chr5 (577-620)||(28819391-28819434)
chr5 (529-608)||(35292371-35292450)
chr5 (483-585)||(38596878-38596980)
chr5 (471-532)||(42471546-42471607)
chr5 (510-608)||(38178082-38178180)
chr5 (510-608)||(38205306-38205404)
chr5 (529-598)||(27349212-27349281)
chr5 (483-596)||(33256410-33256523)
chr5 (529-592)||(27075876-27075939)
chr5 (508-597)||(24496778-24496867)
chr5 (548-596)||(38597020-38597068)
[»] chr2 (54 HSPs)
chr2 (473-620)||(39664745-39664892)
chr2 (473-618)||(44709744-44709889)
chr2 (471-617)||(19908246-19908393)
chr2 (471-620)||(17696204-17696353)
chr2 (473-617)||(16763076-16763220)
chr2 (473-620)||(40560223-40560370)
chr2 (473-620)||(2766934-2767081)
chr2 (477-620)||(42519202-42519346)
chr2 (473-620)||(14389081-14389228)
chr2 (473-620)||(39455169-39455316)
chr2 (509-617)||(16377197-16377305)
chr2 (473-620)||(6797507-6797654)
chr2 (473-598)||(24208061-24208186)
chr2 (473-562)||(39663154-39663243)
chr2 (473-598)||(6786000-6786125)
chr2 (473-562)||(16376736-16376825)
chr2 (471-562)||(14387347-14387438)
chr2 (476-555)||(19906685-19906764)
chr2 (473-620)||(37020508-37020655)
chr2 (473-562)||(16764611-16764700)
chr2 (470-579)||(19581411-19581520)
chr2 (1-98)||(32425012-32425113)
chr2 (466-620)||(37645480-37645634)
chr2 (473-562)||(34400314-34400403)
chr2 (473-562)||(39456780-39456869)
chr2 (473-562)||(40561878-40561967)
chr2 (483-610)||(17946104-17946231)
chr2 (473-562)||(6783364-6783453)
chr2 (473-562)||(24205598-24205687)
chr2 (476-562)||(6799408-6799494)
chr2 (510-592)||(15372536-15372618)
chr2 (510-608)||(37417310-37417408)
chr2 (483-596)||(29909661-29909774)
chr2 (473-562)||(37022185-37022274)
chr2 (515-610)||(7744085-7744180)
chr2 (473-562)||(2577480-2577569)
chr2 (483-608)||(25619670-25619795)
chr2 (510-596)||(39593-39679)
chr2 (483-597)||(11315335-11315449)
chr2 (473-517)||(42517558-42517602)
chr2 (551-610)||(62807-62866)
chr2 (476-563)||(31475079-31475166)
chr2 (510-592)||(41706576-41706658)
chr2 (548-613)||(15807903-15807968)
chr2 (548-613)||(32608051-32608116)
chr2 (529-596)||(39398-39465)
chr2 (483-562)||(41144-41223)
chr2 (476-563)||(37646477-37646564)
chr2 (556-610)||(13999890-13999944)
chr2 (510-580)||(15432365-15432435)
chr2 (513-595)||(26584819-26584901)
chr2 (556-609)||(42879438-42879491)
chr2 (510-610)||(11023000-11023100)
chr2 (510-562)||(41708432-41708484)
[»] chr1 (65 HSPs)
chr1 (473-617)||(6818658-6818802)
chr1 (471-617)||(34778118-34778264)
chr1 (472-620)||(2869578-2869726)
chr1 (473-617)||(4855946-4856090)
chr1 (473-617)||(25278348-25278492)
chr1 (473-617)||(31238475-31238619)
chr1 (471-616)||(50556078-50556223)
chr1 (473-617)||(37344342-37344486)
chr1 (473-620)||(27087283-27087430)
chr1 (473-620)||(51896129-51896276)
chr1 (473-620)||(3013447-3013600)
chr1 (473-620)||(46583533-46583680)
chr1 (513-620)||(15104481-15104588)
chr1 (476-620)||(33602621-33602765)
chr1 (473-575)||(25278975-25279077)
chr1 (471-620)||(9121645-9121794)
chr1 (476-620)||(52643597-52643736)
chr1 (471-560)||(8167940-8168029)
chr1 (473-562)||(31236819-31236908)
chr1 (472-620)||(47013059-47013207)
chr1 (474-562)||(50554164-50554252)
chr1 (473-562)||(8169568-8169657)
chr1 (472-562)||(46582009-46582099)
chr1 (472-554)||(52641887-52641969)
chr1 (473-562)||(26223587-26223676)
chr1 (473-562)||(34776569-34776658)
chr1 (474-541)||(6816866-6816933)
chr1 (476-562)||(3011858-3011944)
chr1 (476-562)||(51894570-51894656)
chr1 (415-472)||(12141461-12141518)
chr1 (473-562)||(25276742-25276831)
chr1 (473-554)||(37088144-37088225)
chr1 (473-562)||(37345962-37346051)
chr1 (472-562)||(2871076-2871166)
chr1 (1-126)||(1542828-1542958)
chr1 (483-608)||(42134492-42134617)
chr1 (529-610)||(51121961-51122042)
chr1 (473-553)||(25278854-25278934)
chr1 (472-562)||(1444181-1444271)
chr1 (415-472)||(1953919-1953977)
chr1 (473-562)||(4854410-4854499)
chr1 (473-562)||(9120039-9120128)
chr1 (473-562)||(27089279-27089368)
chr1 (472-541)||(33599186-33599255)
chr1 (483-608)||(31801643-31801768)
chr1 (483-608)||(36895499-36895624)
chr1 (483-608)||(46638796-46638921)
chr1 (473-562)||(47011456-47011545)
chr1 (473-533)||(45044949-45045009)
chr1 (484-562)||(33599229-33599307)
chr1 (515-592)||(27940650-27940727)
chr1 (474-537)||(1442551-1442614)
chr1 (483-610)||(5783374-5783501)
chr1 (546-620)||(1442594-1442668)
chr1 (415-472)||(47580627-47580685)
chr1 (515-608)||(45380973-45381066)
chr1 (483-592)||(47269461-47269570)
chr1 (510-593)||(44157470-44157553)
chr1 (483-562)||(44159296-44159375)
chr1 (510-580)||(18183960-18184030)
chr1 (556-610)||(43868697-43868751)
chr1 (483-596)||(35479976-35480089)
chr1 (548-613)||(51544210-51544275)
chr1 (510-562)||(27952502-27952554)
chr1 (510-562)||(35478124-35478176)
[»] chr7 (71 HSPs)
chr7 (471-617)||(39859209-39859355)
chr7 (472-620)||(37115503-37115651)
chr7 (473-617)||(6602335-6602479)
chr7 (476-620)||(24228386-24228530)
chr7 (473-620)||(30940402-30940549)
chr7 (473-617)||(45359336-45359480)
chr7 (473-620)||(38474120-38474267)
chr7 (476-617)||(34776895-34777036)
chr7 (473-620)||(47386186-47386333)
chr7 (496-617)||(13168143-13168267)
chr7 (473-620)||(27666042-27666189)
chr7 (476-608)||(37796170-37796302)
chr7 (473-617)||(29996494-29996638)
chr7 (473-620)||(56330-56477)
chr7 (473-562)||(23904583-23904672)
chr7 (473-620)||(20478042-20478189)
chr7 (529-620)||(48852324-48852415)
chr7 (473-562)||(13169683-13169772)
chr7 (476-562)||(39857648-39857734)
chr7 (473-562)||(35403619-35403708)
chr7 (515-620)||(35693347-35693454)
chr7 (472-562)||(37113940-37114030)
chr7 (476-562)||(48227941-48228027)
chr7 (473-562)||(78014-78103)
chr7 (476-610)||(13018036-13018172)
chr7 (473-562)||(22155847-22155936)
chr7 (473-562)||(22211762-22211851)
chr7 (474-562)||(24226582-24226670)
chr7 (470-562)||(47384291-47384383)
chr7 (471-562)||(34774996-34775087)
chr7 (471-562)||(46437105-46437196)
chr7 (476-562)||(6605397-6605483)
chr7 (476-562)||(27664433-27664519)
chr7 (472-562)||(35401968-35402058)
chr7 (477-562)||(35691431-35691516)
chr7 (483-608)||(46996691-46996816)
chr7 (551-617)||(23906241-23906307)
chr7 (473-562)||(20479719-20479808)
chr7 (483-596)||(33038798-33038911)
chr7 (415-472)||(39426260-39426318)
chr7 (473-534)||(23906295-23906356)
chr7 (473-550)||(38549547-38549624)
chr7 (474-533)||(29994907-29994966)
chr7 (473-559)||(45361279-45361365)
chr7 (529-610)||(1546343-1546424)
chr7 (482-563)||(13039641-13039722)
chr7 (472-556)||(46439539-46439623)
chr7 (513-592)||(35344295-35344374)
chr7 (476-563)||(37791657-37791744)
chr7 (483-610)||(45463680-45463807)
chr7 (510-596)||(2167516-2167602)
chr7 (483-608)||(47341675-47341800)
chr7 (516-608)||(23953848-23953940)
chr7 (551-610)||(6056844-6056903)
chr7 (513-592)||(8423286-8423365)
chr7 (483-609)||(27955380-27955506)
chr7 (583-620)||(46439507-46439544)
chr7 (483-596)||(46812583-46812696)
chr7 (546-610)||(23962377-23962441)
chr7 (551-610)||(31913547-31913606)
chr7 (483-562)||(46810715-46810794)
chr7 (538-596)||(366763-366821)
chr7 (515-617)||(11682823-11682925)
chr7 (510-580)||(38613498-38613568)
chr7 (538-610)||(7401958-7402030)
chr7 (510-562)||(8421453-8421505)
chr7 (548-596)||(19712264-19712312)
chr7 (551-595)||(31915040-31915084)
chr7 (483-599)||(34691005-34691121)
chr7 (529-597)||(40784402-40784470)
chr7 (483-610)||(48303636-48303763)
[»] chr4 (59 HSPs)
chr4 (476-620)||(41761723-41761867)
chr4 (473-620)||(41781539-41781686)
chr4 (474-620)||(49523125-49523271)
chr4 (472-617)||(51011925-51012070)
chr4 (473-620)||(48813787-48813934)
chr4 (473-617)||(35404425-35404569)
chr4 (473-620)||(43519424-43519571)
chr4 (496-617)||(52868129-52868250)
chr4 (512-620)||(42980674-42980782)
chr4 (496-620)||(48646724-48646848)
chr4 (473-562)||(49524733-49524822)
chr4 (473-562)||(35401749-35401838)
chr4 (476-620)||(11601674-11601817)
chr4 (483-562)||(39345574-39345653)
chr4 (473-562)||(4173740-4173829)
chr4 (473-562)||(43507167-43507256)
chr4 (473-562)||(43508653-43508742)
chr4 (476-620)||(2693230-2693373)
chr4 (473-562)||(20493827-20493916)
chr4 (473-562)||(33264382-33264471)
chr4 (473-562)||(51013886-51013975)
chr4 (470-554)||(48645252-48645336)
chr4 (472-562)||(4169685-4169775)
chr4 (510-608)||(35996100-35996198)
chr4 (473-562)||(319273-319362)
chr4 (477-562)||(11254123-11254208)
chr4 (473-559)||(320903-320989)
chr4 (510-592)||(47941848-47941930)
chr4 (483-592)||(10372711-10372820)
chr4 (474-563)||(20819986-20820075)
chr4 (473-562)||(33266010-33266099)
chr4 (491-592)||(44794765-44794866)
chr4 (476-596)||(7149542-7149662)
chr4 (496-563)||(2691396-2691463)
chr4 (510-596)||(44558494-44558580)
chr4 (473-562)||(833223-833312)
chr4 (473-562)||(5439647-5439736)
chr4 (483-592)||(10762591-10762700)
chr4 (483-610)||(39083649-39083776)
chr4 (510-608)||(2350496-2350594)
chr4 (473-562)||(5437811-5437900)
chr4 (478-562)||(43521109-43521193)
chr4 (473-592)||(835012-835131)
chr4 (483-596)||(2827417-2827527)
chr4 (508-607)||(13450970-13451069)
chr4 (483-610)||(39921504-39921631)
chr4 (483-610)||(43779854-43779981)
chr4 (551-610)||(44972489-44972548)
chr4 (473-562)||(42982452-42982541)
chr4 (510-610)||(5484577-5484677)
chr4 (483-607)||(39189392-39189516)
chr4 (470-554)||(54387890-54387973)
chr4 (483-562)||(39923009-39923088)
chr4 (515-585)||(27624848-27624918)
chr4 (509-562)||(34460261-34460314)
chr4 (510-610)||(32652136-32652236)
chr4 (510-562)||(44792971-44793023)
chr4 (510-610)||(44994274-44994374)
chr4 (551-603)||(50131240-50131292)
[»] chr6 (41 HSPs)
chr6 (473-617)||(32439071-32439215)
chr6 (473-617)||(32516877-32517021)
chr6 (474-620)||(20523367-20523513)
chr6 (476-620)||(7372935-7373079)
chr6 (473-620)||(6899485-6899632)
chr6 (474-617)||(11355223-11355366)
chr6 (473-620)||(13613559-13613706)
chr6 (477-620)||(10568403-10568546)
chr6 (525-620)||(9398712-9398807)
chr6 (470-554)||(10569927-10570011)
chr6 (488-620)||(14338452-14338584)
chr6 (551-620)||(7049835-7049904)
chr6 (491-618)||(3456766-3456893)
chr6 (473-620)||(32455868-32456015)
chr6 (472-562)||(11357194-11357284)
chr6 (472-562)||(32518497-32518587)
chr6 (472-562)||(18645104-18645193)
chr6 (473-562)||(7371175-7371264)
chr6 (473-562)||(9400035-9400124)
chr6 (473-562)||(20525334-20525423)
chr6 (488-608)||(3018421-3018541)
chr6 (473-552)||(7051255-7051334)
chr6 (471-538)||(8605349-8605416)
chr6 (472-554)||(6902906-6902987)
chr6 (473-562)||(3480657-3480746)
chr6 (473-562)||(32454248-32454337)
chr6 (477-551)||(33276805-33276879)
chr6 (473-554)||(13610690-13610771)
chr6 (483-592)||(29077338-29077447)
chr6 (473-541)||(32437140-32437208)
chr6 (514-592)||(2968180-2968258)
chr6 (510-592)||(4641392-4641474)
chr6 (483-610)||(17952029-17952156)
chr6 (476-554)||(21068628-21068706)
chr6 (510-592)||(29112337-29112419)
chr6 (477-534)||(7049790-7049847)
chr6 (548-613)||(11163875-11163940)
chr6 (529-602)||(30891180-30891253)
chr6 (483-599)||(35175861-35175977)
chr6 (552-609)||(25172097-25172154)
chr6 (476-520)||(21091109-21091153)
[»] scaffold1454 (1 HSPs)
scaffold1454 (476-617)||(1266-1407)
[»] scaffold0564 (1 HSPs)
scaffold0564 (475-617)||(8264-8404)
[»] scaffold0058 (3 HSPs)
scaffold0058 (473-620)||(3294-3441)
scaffold0058 (473-620)||(4466-4613)
scaffold0058 (473-562)||(14343-14432)
[»] scaffold0345 (1 HSPs)
scaffold0345 (472-562)||(1555-1645)
[»] scaffold0081 (1 HSPs)
scaffold0081 (473-562)||(54258-54347)
[»] scaffold0024 (1 HSPs)
scaffold0024 (551-618)||(37282-37349)
[»] scaffold0477 (1 HSPs)
scaffold0477 (510-592)||(6639-6721)
[»] scaffold1712 (1 HSPs)
scaffold1712 (473-562)||(982-1071)
[»] scaffold0002 (1 HSPs)
scaffold0002 (469-549)||(436261-436341)
[»] scaffold0092 (1 HSPs)
scaffold0092 (548-613)||(36834-36899)
[»] scaffold0204 (1 HSPs)
scaffold0204 (551-610)||(30458-30517)


Alignment Details
Target: chr3 (Bit Score: 134; Significance: 2e-69; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 472 - 617
Target Start/End: Complemental strand, 53190904 - 53190759
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  53190904 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 53190805  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53190804 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 27899225 - 27899081
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 21348723 - 21348870
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 51684610 - 51684757
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||| ||||||||||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 471 - 617
Target Start/End: Original strand, 46112485 - 46112631
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||    
T  46112485 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacg 46112584  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  46112585 tccatcaaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 54898437 - 54898574
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagtg 54898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||  |||||||| ||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 30600062 - 30599915
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| | |||||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 17515308 - 17515457
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||||||||||||| ||| |||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||    
T  17515308 tagactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacg 17515407  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  17515408 tccatcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 475 - 620
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  475 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 574  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||| |||||||||||||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  575 tcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 41977750 - 41977894
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| || ||||||| | |||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    | ||||||||||||||||||||||||||| ||||| |||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatga 41977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 486 - 617
Target Start/End: Complemental strand, 35905843 - 35905712
Alignment:
Q  486 aattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 585  Q
    ||||| ||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  586 cctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||| ||||||||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| || | |||||||  ||||||| |||||||||| |  |||||||||| ||||||||||||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 476 - 617
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||||||||||||   |||||||| |||||| | ||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 503 - 620
Target Start/End: Original strand, 46197750 - 46197867
Alignment:
Q  503 taaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 602  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| ||    
T  46197750 taaaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttc 46197849  T
Q  603 cgttagtggtgatgatgt 620  Q
    |||||||| |||||||||    
T  46197850 cgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 3152362 - 3152215
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||  ||| | |||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||| ||||||| | ||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 44794208 - 44794354
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| |||| |||||||| ||| || ||||||||||| ||||||| | |||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 479 - 599
Target Start/End: Original strand, 2660218 - 2660338
Alignment:
Q  479 tacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaa 578  Q
    |||||||||||||||| |||||||| |||||||| |||| |||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  579 aatggtccctccgtccaaaag 599  Q
    | | |||||||||||||||||    
T  2660318 attcgtccctccgtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 23291569 - 23291659
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  23291569 agactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 538 - 620
Target Start/End: Complemental strand, 48830885 - 48830803
Alignment:
Q  538 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48830885 aaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 611314 - 611222
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| | ||||| |||||||| ||||||||||    
T  611314 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 562
Target Start/End: Complemental strand, 2379071 - 2378983
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||| |||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaattt 2378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 471 - 562
Target Start/End: Complemental strand, 38193601 - 38193510
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  38193601 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 551 - 617
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 44267981 - 44268070
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||    
T  44267981 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 44276266 - 44276193
Alignment:
Q  547 tttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 46308807 - 46308896
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 53094362 - 53094273
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 470 - 562
Target Start/End: Original strand, 3150249 - 3150341
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  3150249 atagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||| |||||||| ||||||| | ||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 54900163 - 54900074
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | || ||||||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 600725 - 600853
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||| ||   |||||||| |||||||||||||||||                ||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagt----------------cgtc 600808  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  600809 catcaaaatggtccctccgtctaaaagctccgttagtggtgatga 600853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 46310526 - 46310436
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||  |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  46310526 agactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 519 - 620
Target Start/End: Complemental strand, 19987692 - 19987591
Alignment:
Q  519 ttcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgat 618  Q
    |||||| ||||||||||| ||||||| | ||||||||| ||||||||| ||||||||||||   ||||||||||||||||| || |||||| ||||||||    
T  19987692 ttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgat 19987593  T
Q  619 gt 620  Q
    ||    
T  19987592 gt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 23888886 - 23888761
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| | |  |||||||| |||||| || |||| ||| |||||||   |||||||||||||||  || ||||||||||||| |    
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    |||||||||||||||  |||||||||    
T  23888786 gtccctccgtccaaatcctccgttag 23888761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 30598337 - 30598426
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||| ||||| |||||| |||| |||||||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||| |||||||| ||||||| ||||| ||| || ||||||||||||||||||| | |||||||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 38191895 - 38191984
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| | |||||| |||||| |||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 53187742 - 53187831
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |  | ||||||||||||||| || |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||      
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  583 gtccctc 589  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 54412633 - 54412547
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| ||||||||||||| ||||||||||||||| || ||||||||||  |||||||||| | ||||||||||||| |||||||||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 534  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||  ||||||||||| ||||||| | ||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 46609149 - 46609238
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||| |||||| ||||||||||  ||||||| | |||||||||||||||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 46611392 - 46611303
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||  | ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 48633887 - 48634012
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    |||| ||||||||||  | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  48633987 gtccctccgtccaagtgctccgttag 48634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 554
Target Start/End: Complemental strand, 51686483 - 51686402
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||||||| | |||||| ||||||| |||||||||||| || |||||||| |||||| ||||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 21350697 - 21350605
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||| ||| ||| ||||  ||||||||||||||||||  ||||||||||| ||||| |||||| |||| |||||||    
T  21350697 atagactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaattt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 2977443 - 2977318
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |  |||||||||||||| || || |||| ||| ||||||| ||| ||||||| |||||  || ||||||||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    |||| |||| ||||  ||||||||||    
T  2977343 gtccatccgcccaagtgctccgttag 2977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 45898462 - 45898349
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| | |  ||| |||| || ||| ||||||| ||| ||||||| | ||||||| |||||||  |||||||| ||||||| |    
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  45898362 gtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 48829356 - 48829437
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||||||| |||||||| |||| || ||||||||  |  ||||||||||| |||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 53092623 - 53092712
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  | |||||| |||||| |||||| |||||| ||||||||||| ||||||| | ||| |||||||||||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 478 - 562
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  478 atacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||  |||||||||| ||||||| | ||||||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 618
Target Start/End: Complemental strand, 40509025 - 40508890
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    ||||||||||||||| || |||| ||| ||||||| | ||| ||| |||||||  ||||||||||||||||      
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  583 gtccctccgtccaaaagctccgttagtggtgatgat 618  Q
    ||||||||||||||  | ||||||||| ||| ||||    
T  40508925 gtccctccgtccaagtgttccgttagtcgtgctgat 40508890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 46114195 - 46114105
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaa-tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| |||||||||||  ||| |||||||||||||| ||||||||||| |||  |||||||||| ||||||||||||||||  |||||||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 7883328 - 7883417
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||| ||||||  |||||||| ||||||||||||| |||||| || |||||||  ||||||| | ||||| |||||||||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 18430385 - 18430260
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| ||||||||||    || ||||||||| || || |||| ||| ||||||| | ||||||||||||| |  ||||||||||  |||| |    
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  18430285 gtccctccgtccaagtgctccgttag 18430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 592
Target Start/End: Complemental strand, 41021117 - 41021008
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |    
T  41021117 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 41021018  T
Q  583 gtccctccgt 592  Q
    ||||||||||    
T  41021017 gtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 609
Target Start/End: Complemental strand, 45257307 - 45257208
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    |||||||||||| || || |||| || |||||||| | ||||| |||||||||  ||||||||||| ||||  ||||||||||||||  |||||||||||    
T  45257307 tcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtccataaaaaatgtccctccgtccaagtgctccgttagt 45257208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 1845840 - 1845918
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtta 607  Q
    |||| ||||||||||| | ||||||  ||||||| |||||||||||||||||  ||||||||||||||  |||||||||    
T  1845840 aattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgtccaagtgctccgtta 1845918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 5133068 - 5133133
Alignment:
Q  545 tatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||| |||| ||||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  5133068 tattttgtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 5133133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 28626411 - 28626500
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 31887566 - 31887441
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |   ||||| |||||||  |  | |||| ||| ||||||| | |||||||||||||||  |||| ||| ||||||| |    
T  31887566 tcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaag 31887467  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  31887466 gtccctccgtccaagtgctccgttag 31887441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 17517052 - 17516973
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| |||||||| ||||||||| |||||||||   |||||||||| |||||  ||||| |||| |||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaattt 17516973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 593
Target Start/End: Complemental strand, 33113267 - 33113184
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 593  Q
    ||||||||| || || || |||| ||| ||||||| | ||||||||| |||||  |||||||||||||||| ||||||||||||    
T  33113267 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 27897151 - 27897239
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||| | | | ||||||||||||| |  ||||||||||  |||||||||| || || |||||||||| ||||||||    
T  27897151 gactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaattt 27897239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 561
Target Start/End: Complemental strand, 35572610 - 35572525
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatt 561  Q
    |||||| | |||||||||| ||||||||||||||| |   ||||| ||  |||||||||| |||||| ||||||||||| ||||||    
T  35572610 taatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 551 - 608
Target Start/End: Original strand, 54092764 - 54092821
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||    
T  54092764 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctctgttag 54092821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 608
Target Start/End: Complemental strand, 33852738 - 33852659
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| ||| ||||||| ||||| |  ||||||||  |||||||||||||||| |||||||| ||||||  ||||||||||    
T  33852738 aattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggtccctctgtccaagtgctccgttag 33852659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 48635454 - 48635375
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||| |   ||||| |||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  48635454 tcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 610
Target Start/End: Original strand, 5125884 - 5125938
Alignment:
Q  556 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| ||| |||||||||||||| |||| || ||||||| ||||||||||||    
T  5125884 tgaatttaacaaacgtccatcaaaatagtccttcggtccaaatgctccgttagtg 5125938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 596
Target Start/End: Complemental strand, 24382952 - 24382894
Alignment:
Q  538 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||| | ||||||| || ||||  |||||||||||||||| |||||||||||||||    
T  24382952 aaatatcaacttagtccatggatttgtcagacgtccatcaaaaaggtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 610
Target Start/End: Original strand, 41623735 - 41623789
Alignment:
Q  556 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| ||| |||||||||||||| |||| ||||| |||| ||||||||||||    
T  41623735 tgaatttaacaaacgtccatcaaaatagtccttccgttcaaatgctccgttagtg 41623789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Complemental strand, 26282662 - 26282629
Alignment:
Q  435 attatcatgtataagaagaaattaaaagaaatat 468  Q
    |||||||||||||| |||||||||||||||||||    
T  26282662 attatcatgtataataagaaattaaaagaaatat 26282629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 503
Target Start/End: Complemental strand, 43767108 - 43767075
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaatttt 503  Q
    ||||||||||||||||||||| ||||||||||||    
T  43767108 atagactaatacctcaaattcatccctgaatttt 43767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 1847699 - 1847647
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| || || |||| ||||||||||| ||||| |||||||||||    
T  1847699 tcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaattt 1847647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 610
Target Start/End: Complemental strand, 23877037 - 23876965
Alignment:
Q  538 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| | |||||| |||||||| ||| |||||||||||| |  |||||||||||||   |||||||||||    
T  23877037 aaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaatccctccgttagtg 23876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 25535298 - 25535250
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||||||||||| ||||||||||| |||| |  |||||||||||||    
T  25535298 ttagtccctgaatttaacagacgtccaccaaattcatccctccgtccaa 25535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 562
Target Start/End: Complemental strand, 33051515 - 33051467
Alignment:
Q  514 ccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| ||||| || |||||||||||||||| |||| ||||||||||||    
T  33051515 ccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaattt 33051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 8e-69; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 472 - 620
Target Start/End: Original strand, 13282477 - 13282625
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13282477 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 13282576  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13282577 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 8609931 - 8609787
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 471 - 620
Target Start/End: Complemental strand, 7745258 - 7745109
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||| ||||||||||||  |||||||| ||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||     
T  7745258 tagactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagaca 7745159  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7745158 tccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||| ||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 38547228 - 38547372
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||||  |||||||||| ||||||| | |||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 26242455 - 26242311
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||| ||||| | |||||||| ||||||| |||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||  |||||| |||||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 13486243 - 13486096
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| || | |||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 22272334 - 22272483
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaa--tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||||||||||||||  ||||||||||||||  || | |||||||||| |||||||||||  |||||||||||||||||||||||||||| |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 41825785 - 41825641
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| |||||||| |||||||    |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 27691154 - 27691301
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||| ||||| | | ||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 5036446 - 5036596
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 573  Q
    ||||||||||||||||||||| | |||||||||||||| | |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  574 atcaaaatggtccctccgtcca----aaagctccgttagtggtgatgatgt 620  Q
    |||||||||||| |||||||||    ||||||| ||||||| |||||||||    
T  5036546 atcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgt 5036596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 516 - 620
Target Start/End: Complemental strand, 9673266 - 9673162
Alignment:
Q  516 aaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgat 615  Q
    ||||||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgat 9673167  T
Q  616 gatgt 620  Q
    |||||    
T  9673166 gatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 22273983 - 22273891
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22273983 atagactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 42943515 - 42943426
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 33708947 - 33708801
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||| |||||| ||||||||||| ||||||  | ||||||||||||||||||| |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||| ||||||| | ||||||||||    
T  33708848 catcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 27692926 - 27692837
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 554
Target Start/End: Complemental strand, 34681155 - 34681074
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 525 - 620
Target Start/End: Complemental strand, 40339772 - 40339677
Alignment:
Q  525 tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||| ||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  40339772 tctgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 26238726 - 26238807
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcc 26238807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 601794 - 601704
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  601794 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 33762802 - 33762713
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  33762802 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 38548920 - 38548831
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||| |||||||||||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 29239279 - 29239187
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| || |||||| | ||||||| | |||||||||||||||    
T  29239279 atagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 5038150 - 5038062
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||   |||||||||| ||||| |||||||||||||||||||    
T  5038150 gactaatacctcaaattcgtct-tgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 33761069 - 33761158
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||| ||||||| ||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 35509214 - 35509303
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 562
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 27407041 - 27406894
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| |||||| |||||| ||||||  |||||| | | ||||||  |  ||||||||||||||||||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||| ||||||||||||  |||||||   ||||||||||    
T  27406941 catcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 31821428 - 31821541
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| | |  |||| ||| |||||| || |||| ||| ||||||| | |||||||| ||||||  |||||||||||||||| |    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  31821528 gtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 35510908 - 35510819
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||  |||||||||  ||||||| | |||||||||||||||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 41040720 - 41040809
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||  |||||||| |||||||||| |||||||| |||||||||| ||||||| |||||| |||| |||||||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaattt 41040809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 554
Target Start/End: Original strand, 41823888 - 41823971
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||| |||||||||| |||||||| ||||||| || || ||||||  |||||||||| |||||||||||||||||    
T  41823888 tagactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcc 41823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 8608237 - 8608327
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctg-aattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| |||||||||| |||||||| ||||||||| ||| |||||| ||| |||||||| ||||||| | |||||||||||||||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 13284081 - 13283995
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||| ||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | ||||||| |||||||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 13484544 - 13484634
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||| |||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||   ||||| |||| |||||||    
T  13484544 agactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 620
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  491 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 590  Q
    |||| |||||||| |||||| || ||| || ||| ||||||| |   ||||||| | ||||||||||||||||||||||||||||||||   ||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  591 gtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||  |||||||   ||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 620
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  491 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 590  Q
    |||| |||||||| |||||| || ||| || ||| ||||||| |   ||||||| | ||||||||||||||||||||||||||||||||   ||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  591 gtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||  |||||||   ||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 554
Target Start/End: Complemental strand, 43262226 - 43262145
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||||||| | |||||| ||||||| || ||||||| | || |||||||| |||||||||||||||||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 592
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||||||||||||  | |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 596
Target Start/End: Complemental strand, 42897861 - 42897775
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||||||||||| || |||| ||  ||||||| | ||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 9184393 - 9184520
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| |||||||  |  ||||||||||||||||| |  || |  || ||||||| | |||||||||||||||  |||||||| ||| |||||    
T  9184393 tcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatg 9184492  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||| ||| | ||||||    
T  9184493 gtccctccgtccaaatgcttcattagtg 9184520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 33750472 - 33750385
Alignment:
Q  509 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  ||||| | |||||||| |||||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 37526091 - 37526024
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    |||| ||| ||||||| | |||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  37526091 aattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||| |||||||||| |||||||| |  ||||   ||||||||||  |||||||||| |||||||||||||||||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 609
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| ||  |||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    |||||||||| |  |     
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  583 gtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||||| | |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 562
Target Start/End: Original strand, 3151969 - 3152046
Alignment:
Q  485 aaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| |||| ||||||| ||||||| ||||||||| ||| |||| |||| ||||||| ||||||||||||| |||||    
T  3151969 aaatttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaattt 3152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 32822371 - 32822484
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| |||||||| |   ||||||||||||| || || |||| |  |||||||| | |||||||||||||||  |||| ||||||||||| |    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaaaag 32822470  T
Q  583 gtccctccgtccaa 596  Q
    |||| |||||||||    
T  32822471 gtccttccgtccaa 32822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 600760 - 600811
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtc 524  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  600760 gactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtc 600811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 590
Target Start/End: Complemental strand, 33160262 - 33160155
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| | |  |||||||||||| || || |||| ||  ||||||| | |||||| ||||||||  |||||| ||||||||| |    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaaaag 33160163  T
Q  583 gtccctcc 590  Q
    ||||||||    
T  33160162 gtccctcc 33160155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 1320654 - 1320740
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||| |||||| || || |||| ||||||||||| | |||||||||||||||  ||||||||||| || | ||||| |||||||||    
T  1320654 tcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtccataaataaggtccttccgtccaa 1320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 8654537 - 8654634
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| |||||||||  || |||| ||| ||||||| ||||| | | |||||||  |||||||||||||||| |||||||||||||||  ||||||||||    
T  8654537 tcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaagtgctccgttag 8654634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 462484 - 462371
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||  |||||||| | | ||||||||||||| ||  | |||| ||| ||||||| | ||||||| |||||||  || ||||||||||||| |    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaaag 462385  T
Q  583 gtccctccgtccaa 596  Q
     ||||||| |||||    
T  462384 atccctccatccaa 462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 37801541 - 37801606
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| ||||| |||||| |||||| |||||||||| | | |||||||||||    
T  37801541 ttagtccctgaatttaacaaacgtcaatcaaattggtccttccgtccaaatggttcgttagtggtg 37801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 38882911 - 38882786
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |   ||||| ||||||| ||  | || | ||| | ||||| ||||| |||||||||||  ||||||||||| ||||      
T  38882911 tcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaat 38882812  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  38882811 gtccctccgtccaagtgctccgttag 38882786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 15145808 - 15145749
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||| ||| ||||| |||||||| |||| |||||||||| |||| |||||||    
T  15145808 gtccctgaatttaacaaacgtcgatcaaaatagtccttccgtccaaatgctctgttagtg 15145749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 44620750 - 44620671
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||  ||  ||||| |||| ||||| |  |||||||||||||||| |||| ||||||||||||    
T  44620750 tcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaattt 44620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 40020683 - 40020622
Alignment:
Q  549 tagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||    ||||||||||||  | ||||||||||||||||| ||||||||||    
T  40020683 tagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 40020622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 8e-69; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 17574318 - 17574462
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 7267843 - 7267987
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 36057737 - 36057590
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 470 - 620
Target Start/End: Original strand, 34327632 - 34327782
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 569  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  34327632 atagactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagac 34327731  T
Q  570 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34327732 gtccatcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 30468404 - 30468260
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||| ||||||||| ||||||| ||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtc 30468305  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30468304 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 472 - 617
Target Start/End: Original strand, 2179786 - 2179931
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||  ||||||||||||| |||||||||||||||||| |    
T  2179786 agactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacat 2179885  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  2179886 ccatcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 18625129 - 18624985
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| |||||||| |   ||| || ||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 473 - 616
Target Start/End: Original strand, 8539675 - 8539818
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| |||||||   |||||||||   |||||||||| ||||||||||||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatg 616  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 472 - 620
Target Start/End: Complemental strand, 2854451 - 2854304
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||| ||| | ||||||||||||||||||||||||    
T  2854451 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgt 2854353  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||| |||| | ||||||||||||||||| ||| ||| | ||||||||||    
T  2854352 ccaacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 24541336 - 24541188
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  573 catcaaaatggtc-cctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| |  || |||||||||||||| ||  ||| | ||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 12738825 - 12738736
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 12801648 - 12801559
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 472 - 620
Target Start/End: Complemental strand, 29621906 - 29621758
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    |||||||||||||||| | |||  |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||| |||||||    
T  29621906 agactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 29621807  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  29621806 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 8541360 - 8541271
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 42473731 - 42473584
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||||||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   |||| |||||||||||  |||||||   ||||||||||    
T  42473631 catcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 470 - 562
Target Start/End: Complemental strand, 34328919 - 34328827
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||||||||| |||||| |||| |||||||    
T  34328919 atagactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 40780553 - 40780697
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||   ||||||||||||||||  |||||||   ||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 2852885 - 2852975
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||| ||||||| | ||||| |||||||||    
T  2852885 agactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 7269535 - 7269446
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  ||||||||||||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||    
T  7269535 gactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||| |||  |||||||| |||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 28813856 - 28813765
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaa--tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| ||||||| ||||||  | |||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 18728716 - 18728603
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  18728616 gtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 471 - 562
Target Start/End: Complemental strand, 21843083 - 21842992
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| || |||  |||||||||| ||||||| | |||||||||||||||    
T  21843083 tagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 35395343 - 35395456
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||| |||||||||||| | |  |||||||| |||||| || |||| ||| ||||||| ||||||| |||||||||   ||||||||||||||| |    
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  35395443 gtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 40782300 - 40782211
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 475 - 562
Target Start/End: Complemental strand, 17578022 - 17577935
Alignment:
Q  475 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||| |||||||| ||||||||||| | ||| || ||||||||||||||||||| | ||||| | |||||||    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaattt 17577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 28822176 - 28822090
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||| |||||||| |||||| || |||||||||| ||||||||||| ||||  |||||| |||| |||||||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 29620138 - 29620227
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||| ||||||||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 32087524 - 32087637
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    |||  ||| |||||| || |||| ||| ||||||| | ||||||||| |||||| |||||||||||||||| |    
T  32087524 tcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaag 32087623  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  32087624 gtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 564
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttta 564  Q
    |||||||||| | | |||||| ||||||| ||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 560
Target Start/End: Original strand, 41493841 - 41493931
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaat 560  Q
    ||||| ||||||||||| ||||||| |||||||| ||||||| ||||||||||||    |||||||  ||||||||||||||||| |||||    
T  41493841 atagagtaatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  ||||||||||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 602
Target Start/End: Complemental strand, 15459303 - 15459184
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||  ||  ||||| |||| ||||| |  |||||  | ||||  |||||| || ||||||||| |||||||||||||||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatg 15459204  T
Q  583 gtccctccgtccaaaagctc 602  Q
    |||||| |||||||| ||||    
T  15459203 gtcccttcgtccaaatgctc 15459184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 577 - 620
Target Start/End: Original strand, 28819391 - 28819434
Alignment:
Q  577 aaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  28819391 aaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 28819434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 608
Target Start/End: Complemental strand, 35292450 - 35292371
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| ||| ||||||| | |||||||||||||||  ||||||||||| |||| ||| |||||||||||| ||||||||||    
T  35292450 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgttag 35292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 585
Target Start/End: Original strand, 38596878 - 38596980
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    ||||||||||||||| || |||| ||| ||||||| | |||||||||||||||   ||||||||||||||| |    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaag 38596977  T
Q  583 gtc 585  Q
    |||    
T  38596978 gtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 42471546 - 42471607
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatt 532  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||| |||||| |||||||    
T  42471546 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatt 42471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 38178180 - 38178082
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| ||||||| || || |||| ||| ||||||| |||||||  ||||||||  |||||||||||||||| ||||||| ||||||   ||||||||||    
T  38178180 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttag 38178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 38205404 - 38205306
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| ||||||| || || |||| ||| ||||||| |||||||  ||||||||  |||||||||||||||| ||||||| ||||||   ||||||||||    
T  38205404 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttag 38205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 598
Target Start/End: Original strand, 27349212 - 27349281
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa 598  Q
    |||||||| ||||||| |||| |||| |||||||  |  ||||| |||||||||||||||||||||||||    
T  27349212 aattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 33256410 - 33256523
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| | |  |||||||| ||| ||  | |||| ||| ||||||| | ||| ||  |||||||  ||||||||||||||||      
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  33256510 gtccctccgtccaa 33256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 592
Target Start/End: Original strand, 27075876 - 27075939
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||| ||||||||| | ||||| ||||||||| |||||||||||||||| |  |||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaattcatccctccgt 27075939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 597
Target Start/End: Original strand, 24496778 - 24496867
Alignment:
Q  508 aatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 597  Q
    |||||| |||||| ||| || |||| ||  ||||||| | ||| |||||||||||   |||||| |||||||||||||| ||||||||||    
T  24496778 aatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgtccaaa 24496867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Original strand, 38597020 - 38597068
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||||| |||||  |||||||||||||||| |||||||| ||||||    
T  38597020 ttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaa 38597068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 39664892 - 39664745
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||    
T  39664892 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtc 39664793  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39664792 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 473 - 618
Target Start/End: Complemental strand, 44709889 - 44709744
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgat 618  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 471 - 617
Target Start/End: Complemental strand, 19908393 - 19908246
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaa-tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 569  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  19908393 tagactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagac 19908294  T
Q  570 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  19908293 gtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 17696204 - 17696353
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| |||    
T  17696204 tagattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacg 17696303  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  17696304 tcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 16763076 - 16763220
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagtggcgatga 16763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 40560223 - 40560370
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 2766934 - 2767081
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||| |||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  2766934 gactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 2767033  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2767034 tatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 477 - 620
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt-gcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||||||||||||| ||||||||||||||| |  |||||| |||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 14389228 - 14389081
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 39455169 - 39455316
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattc-gtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    |||||||| |||||||| |||| ||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtc-ctgaattttgcaaaatatctatttagtccatgaattttacagacgt 39455267  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  39455268 ccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 509 - 617
Target Start/End: Complemental strand, 16377305 - 16377197
Alignment:
Q  509 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  609 tggtgatga 617  Q
    |||||||||    
T  16377205 tggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 6797507 - 6797654
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||| |||||| |   ||||||||||||||| ||| ||||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6797507 gactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtc 6797606  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
     ||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  6797607 tatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 598
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| |  ||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  573 catcaaaatggtccctccgtccaaaa 598  Q
    |||||||   ||||||||||||||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 39663154 - 39663243
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 598
Target Start/End: Complemental strand, 6786125 - 6786000
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| || |||| |   ||||||| | |||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  573 catcaaaatggtccctccgtccaaaa 598  Q
    |||||||   ||||||||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 16376736 - 16376825
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||| |||||||||||||||||||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 471 - 562
Target Start/End: Original strand, 14387347 - 14387438
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  14387347 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 555
Target Start/End: Original strand, 19906685 - 19906764
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccc 555  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 37020508 - 37020655
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| || |||  ||||||||   ||||||| | |||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 16764700 - 16764611
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 470 - 579
Target Start/End: Original strand, 19581411 - 19581520
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 569  Q
    ||||||||||||||||||||||||| | |||||| ||||||| |||||||| ||| ||||||||||| |||||||||||||||||  ||||||  || |     
T  19581411 atagactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaat 19581510  T
Q  570 gtccatcaaa 579  Q
    ||||||||||    
T  19581511 gtccatcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 32425113 - 32425012
Alignment:
Q  1 attaaaccaaaacacaaccaaccat----tctcaaacattatttaaagtcaatagcaccaacatttctaatggaaagcgtgtcagtgtcccattgattat 96  Q
    |||||||| ||||||||||||||||    || || |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  32425113 attaaacccaaacacaaccaaccatccattcacagacattatttagaatcaatagcaccaacatttctaatggaacgcgtgtcagtgtcccattgactat 32425014  T
Q  97 at 98  Q
    ||    
T  32425013 at 32425012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 620
Target Start/End: Original strand, 37645480 - 37645634
Alignment:
Q  466 tatgatagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttac 565  Q
    |||| |||| ||||||| ||| ||||||| |||||||| ||||||| | | ||||||||  | ||||||   ||||||||||||||||| |||||||| |    
T  37645480 tatggtagagtaataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgc 37645579  T
Q  566 agacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||| ||  |||||||| ||||||||||||| |||||| |||| || |||||||||    
T  37645580 agatgtttatcaaaattgtccctccgtccataagctctgttattgatgatgatgt 37645634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 34400314 - 34400403
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||| || ||||||||||| ||||| |||||| |||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 39456869 - 39456780
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||  |||||||||  |||||||||||||||| |||||||||||||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 40561967 - 40561878
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||  ||||| | | |||||||||||||||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 17946104 - 17946231
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||  ||  ||| || ||| |||||  | |||||||||||||||| |||| ||||||||||||  |  | |||||||||||||    
T  17946104 tcaacttcgtccctgaatttgcaagcatcagctaaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatg 17946203  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  17946204 gtccctccgtccaaaaggtccgttagtg 17946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||||||||||||| ||| |||||| ||||||| | ||||||||| | |||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 24205598 - 24205687
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 6799494 - 6799408
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 592
Target Start/End: Original strand, 15372536 - 15372618
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    ||||||||||||| | || |||| ||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  15372536 tcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 37417310 - 37417408
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||||| |||||||  ||||||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttag 37417408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 29909774 - 29909661
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||| ||||||||||||| |    |||||||| || ||| || |||| ||| ||||||| ||||||||||| |||||  |||||||||||||||| |    
T  29909774 tcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaag 29909675  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  29909674 gtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 37022274 - 37022185
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 610
Target Start/End: Original strand, 7744085 - 7744180
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||| |||||||  |||||||| ||||||| |||| ||||||||||||  |  | ||||||||||||||||||||| |||||||| ||||||||||    
T  7744085 caaaatcgtctcaaaattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtg 7744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 2577569 - 2577480
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| |||||| |||||||||   ||||||| | |||||||||||||||    
T  2577569 gactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 25619670 - 25619795
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    |||| ||||||| || || |||| ||||||||||| | |||||||||||||||  || | ||||||||||| |    
T  25619670 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaag 25619769  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    |||||||| |||||  ||||||||||    
T  25619770 gtccctccatccaagtgctccgttag 25619795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 39593 - 39679
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||  ||| |||| || |||| |||||||||||||||    
T  39593 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctccgtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 597
Target Start/End: Complemental strand, 11315449 - 11315335
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| | |||||| |  ||||||||||||||||  |  |||||  | ||||||| |  |||| |||||||||  ||||||||||||||||||    
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  583 gtccctccgtccaaa 597  Q
    |||||||||||||||    
T  11315349 gtccctccgtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 42517558 - 42517602
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaa 517  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggccaa 42517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 62866 - 62807
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||| |||||| |||||    
T  62866 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgctagtg 62807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 563
Target Start/End: Complemental strand, 31475166 - 31475079
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    ||||||||||| ||||| | | |||||| ||||||| | |||||||||| |  |||||||  ||||||||||||| ||||||||||||    
T  31475166 taatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 592
Target Start/End: Original strand, 41706576 - 41706658
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||| |||||||||| || |||| ||| ||||||| ||||| |||||||||||  |  ||||||||||||| |||||||||||    
T  41706576 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 15807968 - 15807903
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  15807968 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 15807903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 32608116 - 32608051
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  32608116 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 32608051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 596
Target Start/End: Complemental strand, 39465 - 39398
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    |||| ||| ||||||| | |||||||||||||||  ||||||| |||||||| |||||| ||||||||    
T  39465 aattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaa 39398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 41223 - 41144
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  41223 tcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 563
Target Start/End: Complemental strand, 37646564 - 37646477
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    ||||||| ||| ||||| | |||| ||| ||||||| | ||||||||||    |||| ||| ||||||||||||||||||||||||||    
T  37646564 taataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 610
Target Start/End: Original strand, 13999890 - 13999944
Alignment:
Q  556 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  13999890 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccattagtg 13999944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 15432365 - 15432435
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 580  Q
    |||| ||||||| || || |||| ||| ||||||| |||||||| ||||||||  ||||||||||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaa 15432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 26584901 - 26584819
Alignment:
Q  513 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 595  Q
    |||||||||||| || || ||| ||||||||| | ||| ||||| ||||| | |||||||||||||| |  ||||||||||||    
T  26584901 gccaaattcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtcca 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 42879438 - 42879491
Alignment:
Q  556 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    |||||||  |||||||||||||||| |||||||||||||||  | |||||||||    
T  42879438 tgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgttccgttagt 42879491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 610
Target Start/End: Complemental strand, 11023100 - 11023000
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||    ||||||||||||||||| |||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T
Q  610 g 610  Q
    |    
T  11023000 g 11023000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 41708484 - 41708432
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  41708484 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 5e-64; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 471 - 617
Target Start/End: Complemental strand, 34778264 - 34778118
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||||| |    
T  34778264 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatg 34778165  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34778164 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 472 - 620
Target Start/End: Original strand, 2869578 - 2869726
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||    
T  2869578 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgt 2869677  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2869678 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 4856090 - 4855946
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 25278492 - 25278348
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 31238619 - 31238475
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 471 - 616
Target Start/End: Complemental strand, 50556223 - 50556078
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||| ||||||||||||  |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  50556223 tagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacg 50556124  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 616  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  50556123 tctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 37344342 - 37344486
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||  ||||||||||| |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 27087283 - 27087430
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 27087382  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||    
T  27087383 catcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 51896276 - 51896129
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||| ||||||||||| ||||| | |||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtc 51896177  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  51896176 catcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||| ||| | ||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  573 ------catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
          ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 46583680 - 46583533
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 513 - 620
Target Start/End: Original strand, 15104481 - 15104588
Alignment:
Q  513 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggt 612  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  15104481 gccaaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggt 15104580  T
Q  613 gatgatgt 620  Q
    ||||||||    
T  15104581 gatgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||  ||||||| | |||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||| | ||||||||||||||||| |||||||||  |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 473 - 575
Target Start/End: Complemental strand, 25279077 - 25278975
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||    
T  25279077 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtc 25278978  T
Q  573 cat 575  Q
    |||    
T  25278977 cat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 471 - 620
Target Start/End: Complemental strand, 9121794 - 9121645
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||| |||||| || |||||| | ||||||| | |||||||||||||||| ||||||    
T  9121794 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacg 9121695  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  9121694 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 52643736 - 52643597
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| | |||||| ||||||| |  ||||||||| ||||||||||| |||||| |||||||||||||||||||| | |||||       
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgtc--- 52643640  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
      | |||||| ||||||||||||||||||||||||||||||||||    
T  52643639 --agatggtctctccgtccaaaagctccgttagtggtgatgatgt 52643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 471 - 560
Target Start/End: Original strand, 8167940 - 8168029
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaat 560  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||    
T  8167940 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 31236819 - 31236908
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 472 - 620
Target Start/End: Complemental strand, 47013207 - 47013059
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    |||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||| || ||||    
T  47013207 agactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgt 47013108  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||   ||||||||||||||||  |||||||   ||||||||||    
T  47013107 ccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 474 - 562
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 8169657 - 8169568
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| ||||||||| | |||||||||||||||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 46582009 - 46582099
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  46582009 agactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 554
Target Start/End: Original strand, 52641887 - 52641969
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||| |||||| ||||||||||    
T  52641887 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 6816866 - 6816933
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 541  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||| | |||||||||||||| | |||||||||  ||||||||||| |||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 51894570 - 51894656
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||| |||||||||| | ||||||||||||||| || |||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 12141461 - 12141518
Alignment:
Q  415 tgttgtaaattagatgtggaattatcatgtataagaagaaattaaaagaaatatgata 472  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12141461 tgttgtaaattagatgtggaattatcatgtataagaagaaattataagaaatatgata 12141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 25276742 - 25276831
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||| ||  |||||||||| ||||||| | |||||||||||||||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 554
Target Start/End: Complemental strand, 37088225 - 37088144
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||| ||||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtcc 37088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 37346051 - 37345962
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| |||||||| |||| ||| || ||||||||||| ||||||| | |||||||||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 2871166 - 2871076
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||| |||||| |||  |||||||    
T  2871166 agactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1542958 - 1542828
Alignment:
Q  1 attaaaccaaaacacaaccaacc----attctcaaacattatttaaagtcaatagcaccaacatttctaatggaaagcgtgtcagtgtcccat-tgatta 95  Q
    |||||||||||||||||||||||    |||| || | |||||||  | ||||||||||||||||||| ||||||| | ||||| || || ||| ||||||    
T  1542958 attaaaccaaaacacaaccaaccttccattcacatatattatttggaatcaatagcaccaacatttcaaatggaacgtgtgtcggtatcacatgtgatta 1542859  T
Q  96 tattcaaatcacttattttcttaaattatta 126  Q
    ||||||||| | |||||||||||||||||||    
T  1542858 tattcaaataaattattttcttaaattatta 1542828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 42134492 - 42134617
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  42134592 gtccctccgtccaagtgctccgttag 42134617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 51121961 - 51122042
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||||||| |||| ||||||||||||  |  |||||||||||||||||||||||||||||||| || |||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtg 51122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 553
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtc 553  Q
    |||||||||||||||||| ||| |||||||| ||||||| | |||||| ||| ||||||||||| ||||||||||||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 1444271 - 1444181
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||| | |||| | |||||| ||||||||||||| || ||| ||||||||| ||||||||| | |||||||||||||||    
T  1444271 agactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 1953977 - 1953919
Alignment:
Q  415 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 472  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1953977 tgttgtaaatttagatgtggaaatatcatgtataagaagaaattaaaagaaatatgata 1953919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 4854410 - 4854499
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||| |||||||||||| |||||||| ||||||||  ||| |||||| ||||||||||| ||| ||| | |||||||||||||||    
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 9120039 - 9120128
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 27089368 - 27089279
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| |||||||||| || ||||||  |||||||||  ||||||| | ||| |||||||||||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 33599186 - 33599255
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 541  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  ||||||||| |||||    
T  33599186 agactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttgaaaaat 33599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 31801643 - 31801768
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||||| |||||| | |  |||| ||| |||||| || |||| ||| ||||||| | ||||||| | |||||   ||||||||||||||| |    
T  31801643 tcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaag 31801742  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  31801743 gtccctccgtccaagtgctccgttag 31801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 36895624 - 36895499
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||| ||||||||||||| |    |||| ||| ||||||  | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  36895624 tcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 36895525  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    |||||| |||||||  ||||||||||    
T  36895524 gtcccttcgtccaagtgctccgttag 36895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 46638921 - 46638796
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||| |||||||||| |    |||||||| ||| || || |||| ||| ||||||| | ||||||| |||||||  |||||||||| ||||| |    
T  46638921 tcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaag 46638822  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  46638821 gtccctccgtccaagtgctccgttag 46638796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 47011456 - 47011545
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| ||||||  |||||||| | ||||||| | |||||||||||||||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 533
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattt 533  Q
    |||||||||||||||||||||| ||||||||||||||| || | |||||||| ||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 562
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  484 caaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| |||||||| ||||||||| ||||||||||  |||||||||| ||||||| | ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 592
Target Start/End: Original strand, 27940650 - 27940727
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||||||| || |||| ||| ||||||| ||||| ||| |||||||  |||||||||||||||| |||||||||||    
T  27940650 caaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 537
Target Start/End: Original strand, 1442551 - 1442614
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgca 537  Q
    |||||||||||| | | |||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgca 1442614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 5783374 - 5783501
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    |||||||||||| ||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  5783374 tcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 5783473  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  5783474 gtccctccgtccaaaaggtccgttagtg 5783501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 620
Target Start/End: Original strand, 1442594 - 1442668
Alignment:
Q  546 atttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||| ||||||||||||| |||||||||||||||   ||||||||||||||||  |||||||   ||||||||||    
T  1442594 atttcgtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 47580685 - 47580627
Alignment:
Q  415 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 472  Q
    ||||||||||| ||||||| || ||||||  ||||||||||||||||||||||||||||    
T  47580685 tgttgtaaatttagatgtgaaactatcattaataagaagaaattaaaagaaatatgata 47580627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 608
Target Start/End: Complemental strand, 45381066 - 45380973
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    ||||||| || || |||| ||| ||||||| | ||||| | |||||||  |||||||||||||||| ||| |||||||||||  ||||||||||    
T  45381066 caaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttag 45380973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 592
Target Start/End: Complemental strand, 47269570 - 47269461
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| | | |||| || ||||  |||||||||||  || ||||||||||||| |    
T  47269570 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtccatcaaaaag 47269471  T
Q  583 gtccctccgt 592  Q
    ||||||||||    
T  47269470 gtccctccgt 47269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 593
Target Start/End: Original strand, 44157470 - 44157553
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 593  Q
    |||||||||||| || || |||| ||||||||||| | |||||||||||||||   |||||||||| ||||  |||| ||||||    
T  44157470 tcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtccataaaaaaagtccttccgtc 44157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 44159375 - 44159296
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||| | | ||||| ||| |||||| || |||| ||||||||||| ||||| | |||||||||    
T  44159375 tcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaattt 44159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 18184030 - 18183960
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 580  Q
    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  ||||||||||||||||    
T  18184030 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 18183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 610
Target Start/End: Original strand, 43868697 - 43868751
Alignment:
Q  556 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| ||| || ||||||||||| |||| |||||||||| ||||||||||||    
T  43868697 tgaatttaacaaacatccatcaaaatagtccttccgtccaaatgctccgttagtg 43868751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 35480089 - 35479976
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| |||||||| |   ||| ||||||||| || || |||| ||| ||||||| | ||| ||  |||||||  |||||||||||||||| |    
T  35480089 tcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtccatcaaaaag 35479990  T
Q  583 gtccctccgtccaa 596  Q
    |||| |||||||||    
T  35479989 gtccttccgtccaa 35479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 51544210 - 51544275
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| | ||| |||||| |||||  |||||||||| | |||||||||||||    
T  51544210 ttagtccctgaatttaacaaatgtcaatcaaattggtcattccgtccaaatggtccgttagtggtg 51544275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Complemental strand, 27952554 - 27952502
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  27952554 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 27952502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 35478124 - 35478176
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| ||| || |||| ||||||||||| ||||| |||||||||||    
T  35478124 tcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 7e-63; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 471 - 617
Target Start/End: Complemental strand, 39859355 - 39859209
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 570  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  39859355 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacg 39859256  T
Q  571 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||    
T  39859255 tccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 472 - 620
Target Start/End: Complemental strand, 37115651 - 37115503
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37115651 agactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgt 37115552  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37115551 ccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 6602335 - 6602479
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||| |||||||||| || ||||||||||||||||||| ||| |  || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 24228530 - 24228386
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||| ||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 30940549 - 30940402
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||| ||||| || | |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 45359336 - 45359480
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||| |||||||||||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| ||||  ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 476 - 617
Target Start/End: Complemental strand, 34777036 - 34776895
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 47386333 - 47386186
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| | |||||||||||||| | ||||||||||  |||||||||| |||||| ||||||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 496 - 617
Target Start/End: Original strand, 13168143 - 13168267
Alignment:
Q  496 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccct---gaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| |||||    
T  13168143 tgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgt 13168242  T
Q  593 ccaaaagctccgttagtggtgatga 617  Q
    |||||||||||||||||||||||||    
T  13168243 ccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 27666189 - 27666042
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   |||||||||||||||||  |||||| | ||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 37796302 - 37796170
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||||||||| |||| |||||||| ||||||| ||||||||||||    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  576 caaaatggtccctccgtccaaaagctccgttag 608  Q
    |||||| ||||||||||||| ||||||||||||    
T  37796202 caaaatagtccctccgtccataagctccgttag 37796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 29996638 - 29996494
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| || ||| ||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||| | |||||||| |||||||| ||||||| | |||||||    
T  29996538 catcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||     |||||||||||||||  || |||||| ||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 23904583 - 23904672
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||  ||||||||| | ||||||| | |||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 529 - 620
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 13169772 - 13169683
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 39857648 - 39857734
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 35403708 - 35403619
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 515 - 620
Target Start/End: Complemental strand, 35693454 - 35693347
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctat--ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggt 612  Q
    ||||||||||  ||||||||||  ||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  35693454 caaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggt 35693355  T
Q  613 gatgatgt 620  Q
    ||||||||    
T  35693354 gatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 37113940 - 37114030
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||| || ||||||||||| ||||||||||||||||||| |||||    
T  37113940 agactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 78103 - 78014
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||| ||||||||||||||||||| | || ||||||||||||    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 476 - 610
Target Start/End: Original strand, 13018036 - 13018172
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgc--aaaatatctatttagtccctgaattttacagacgtcc 573  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||    ||||| ||  || ||||||||||  || |||||||| ||| ||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  574 atcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||||||||||||||   |||||||||||    
T  13018136 atcaaaatggtccctccgtccaatcactccgttagtg 13018172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 22155936 - 22155847
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| || ||||||| |||||||| ||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 22211851 - 22211762
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||| || ||||||| |||||||| ||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 474 - 562
Target Start/End: Original strand, 24226582 - 24226670
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 562
Target Start/End: Original strand, 47384291 - 47384383
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||  |||||||||| ||||||||| |||||||| ||||||    
T  47384291 atagactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 471 - 562
Target Start/End: Original strand, 34774996 - 34775087
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||| |   |||||||||||||||| |||||||||||||||||||    
T  34774996 tagactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 471 - 562
Target Start/End: Original strand, 46437105 - 46437196
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  46437105 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 562
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||| |||| |||||||||||||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 562
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||| |||| |||||||| ||||||||||||| || ||| ||||||||||||||||||| | |||||||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 35401968 - 35402058
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||    
T  35401968 agactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 562
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 46996816 - 46996691
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||| ||||||||  |||||||||||||||| |    
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||||||||||||||  ||||||||||    
T  46996716 gtccctccgtccaagtgctccgttag 46996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 551 - 617
Target Start/End: Complemental strand, 23906307 - 23906241
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatga 23906241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 20479808 - 20479719
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    |||| ||||||| || || |||| ||| ||||||| | |||||||||||||||| |||||||||||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 39426260 - 39426318
Alignment:
Q  415 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 472  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  39426260 tgttgtaaatttagatgtggaactatcatgtataagaagaaattaaaagaaatatgata 39426318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 534
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 534  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 550
Target Start/End: Original strand, 38549547 - 38549624
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctattta 550  Q
    ||||||||||| |||||||||| |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctattta 38549624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 533
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattt 533  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 559
Target Start/End: Complemental strand, 45361365 - 45361279
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaa 559  Q
    |||||||||||||||||| ||| ||||||||||||||| || ||| || ||  |||||||||||||||||  |||||||||| ||||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaa 45361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 1546343 - 1546424
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||| ||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| ||||||||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 1546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 563
Target Start/End: Complemental strand, 13039722 - 13039641
Alignment:
Q  482 ctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    ||||| ||||||| |||||||| |||||||   |||||||||| || |||||||| ||||| ||||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 472 - 556
Target Start/End: Complemental strand, 46439623 - 46439539
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccct 556  Q
    ||||||||| ||||||||||||  |||||||| ||||||||  |||| | |||| | |||||||| |||||||||||||||||||    
T  46439623 agactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 592
Target Start/End: Complemental strand, 35344374 - 35344295
Alignment:
Q  513 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||||||||| || |||| ||| ||||||| ||||| |||||||||||   ||||||||||||||| |||||||||||    
T  35344374 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 563
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    |||||||| || ||||||  | |||||||||||||| ||||||||| || |  |||||||| ||||||||||||||||||| ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 45463680 - 45463807
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  45463680 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 45463779  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  45463780 gtccctccgtccaaaaggtccgttagtg 45463807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 2167516 - 2167602
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    |||| ||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||| ||||||||| |||||||||||||||    
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 47341800 - 47341675
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||  ||||||| |    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttaatcaaaaag 47341701  T
Q  583 gtccctccgtccaaaagctccgttag 608  Q
    ||  ||||||||||  ||||||||||    
T  47341700 gtatctccgtccaagtgctccgttag 47341675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 516 - 608
Target Start/End: Original strand, 23953848 - 23953940
Alignment:
Q  516 aaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||||||||  | |||| ||| ||||||| | ||||||| |||||||  |||||||| ||||||| |||||||||||||||  ||||||||||    
T  23953848 aaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaaggtccctccgtccaagtgctccgttag 23953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 610
Target Start/End: Original strand, 6056844 - 6056903
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||| ||||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  6056844 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 6056903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 592
Target Start/End: Complemental strand, 8423365 - 8423286
Alignment:
Q  513 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||||||| ||| || |||| ||| ||||||| ||||| |||||||||||  |||||||| ||||||| |||||||||||    
T  8423365 gccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctccgt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 609
Target Start/End: Original strand, 27955380 - 27955506
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||| |||||||| |   ||| || |||||| || || |||||| | ||||||| | ||| |  ||||||||  |||||||||||||||  |    
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  583 gtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||  |||||||||||    
T  27955480 gtccctccgtccaagtgctccgttagt 27955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 583 - 620
Target Start/End: Complemental strand, 46439544 - 46439507
Alignment:
Q  583 gtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46439544 gtccctccgtccaaaagctccgttagtggtgacgatgt 46439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 596
Target Start/End: Complemental strand, 46812696 - 46812583
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| |||||||| |  | |||||||||||| || || ||||  |  ||||||| ||||||||||| |||||  |||||||||||||||| |    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaag 46812597  T
Q  583 gtccctccgtccaa 596  Q
    |||  |||||||||    
T  46812596 gtcattccgtccaa 46812583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 23962377 - 23962441
Alignment:
Q  546 atttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||| |||||||||||| ||| ||||| |||||||| |||| |||||| ||| ||||||||||||    
T  23962377 attttgtccctgaatttaacaaacgtcaatcaaaatagtccttccgtcaaaatgctccgttagtg 23962441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 610
Target Start/End: Original strand, 31913547 - 31913606
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||  ||| |||||||||||||| || | |||||||||| ||||||||||||    
T  31913547 gtccctgaattcaacaaacgtccatcaaaatagttcttccgtccaaatgctccgttagtg 31913606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Original strand, 46810715 - 46810794
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||| |   |||||||||||| ||| || |||| ||| ||||||| ||||| |||||||||||    
T  46810715 tcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaattt 46810794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 596
Target Start/End: Original strand, 366763 - 366821
Alignment:
Q  538 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    ||||||| | ||||||||||||||| ||||||||| |||||| |  |||||||||||||    
T  366763 aaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaa 366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 617
Target Start/End: Original strand, 11682823 - 11682925
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtga 614  Q
    |||| ||||| || |||| ||||||||||| | ||||||| ||||||    |||||||||||||  | ||||||||||||||   ||| |||||||||||    
T  11682823 caaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaatctctctgttagtggtga 11682922  T
Q  615 tga 617  Q
    |||    
T  11682923 tga 11682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 38613568 - 38613498
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 580  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  ||||||||||| ||||    
T  38613568 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaa 38613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 610
Target Start/End: Original strand, 7401958 - 7402030
Alignment:
Q  538 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    ||||||| | || |||||||||||| |||||||||||||||| |  || |||| ||||| | |||||||||||    
T  7401958 aaatatcaaattcgtccctgaatttaacagacgtccatcaaattcatcactccatccaatatctccgttagtg 7402030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 8421453 - 8421505
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  8421453 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 8421505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 19712312 - 19712264
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    |||||| ||||||||   |||||||||||||||||||||| ||||||||    
T  19712312 ttagtctctgaatttattagacgtccatcaaaatggtcccaccgtccaa 19712264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 31915084 - 31915040
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtcca 595  Q
    |||||||||||| ||| |||||||||||||| |||||| ||||||    
T  31915084 gtccctgaatttaacaaacgtccatcaaaatagtccctacgtcca 31915040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 599
Target Start/End: Original strand, 34691005 - 34691121
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||| |||||||||||| |   |||||||||||||||| |  |||||  ||||||||| |  ||||| ||||||||  | ||||||||||||  |     
T  34691005 tcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtccatcaatttc 34691104  T
Q  583 gtccctccgtccaaaag 599  Q
    |||||||| ||||||||    
T  34691105 gtccctccatccaaaag 34691121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 529 - 597
Target Start/End: Original strand, 40784402 - 40784470
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 597  Q
    |||| ||| ||||||| | ||||||  |||||||  ||||| |||||||||| ||||||||||||||||    
T  40784402 aattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaaggtccctccgtccaaa 40784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 483 - 610
Target Start/End: Complemental strand, 48303763 - 48303636
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtc-tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaat 581  Q
    |||| |||||||||||||||| |   ||||| ||||| |||| ||| |||||  ||||||||| |  ||||||||||||||    ||||||||||||  |    
T  48303763 tcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctct-aatttaacaaaatatcaaaatagtccctgaatttatttgacgtccatcaattt 48303665  T
Q  582 ggtccctccgtccaaaagctccgttagtg 610  Q
     ||||||||||||||||| || |||||||    
T  48303664 cgtccctccgtccaaaaggtctgttagtg 48303636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 3e-59; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 41781539 - 41781686
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||    
T  41781539 gactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatc 41781638  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  41781639 catcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 573  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  574 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 472 - 617
Target Start/End: Original strand, 51011925 - 51012070
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 571  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||| |   |||||||||| |||||||||||||||| |||||||||||||||||    
T  51011925 agactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgt 51012024  T
Q  572 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  51012025 ccatcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 48813787 - 48813934
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||||  || |||||||||||||||||| |||||||| ||||||||||| |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||| |||| | | ||||||||||||||||||| |||||||||  | |||||||| |||||| |||||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    || ||||||||||| ||||||||||||||||||||||||||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 43519424 - 43519571
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 43519523  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||| ||| ||| | ||||||||||    
T  43519524 catcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 496 - 617
Target Start/End: Complemental strand, 52868250 - 52868129
Alignment:
Q  496 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 595  Q
    |||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| |||||||| ||||||| | |||||||||||| || ||||||    
T  52868250 tgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtcca 52868151  T
Q  596 aaagctccgttagtggtgatga 617  Q
    |||||||||||||||| |||||    
T  52868150 aaagctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 512 - 620
Target Start/End: Original strand, 42980674 - 42980782
Alignment:
Q  512 ggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtgg 611  Q
    ||||||||| |||  |||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42980674 ggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtgg 42980773  T
Q  612 tgatgatgt 620  Q
    |||||||||    
T  42980774 tgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 496 - 620
Target Start/End: Complemental strand, 48646848 - 48646724
Alignment:
Q  496 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 595  Q
    |||||||| |||| || || |||||||||  ||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  48646848 tgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtcca 48646749  T
Q  596 aaagctccgttagtggtgatgatgt 620  Q
    |||||| ||||||||||||||||||    
T  48646748 aaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 49524822 - 49524733
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 35401749 - 35401838
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 476 - 620
Target Start/End: Original strand, 11601674 - 11601817
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||| |||||||| | |||||||| ||||||| | ||||||  || |  ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccat 11601772  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||| ||||||| ||||| ||||| |||||||| || ||||||    
T  11601773 caaaatagtccctctgtccacaagcttcgttagtgatgctgatgt 11601817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 483 - 562
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 4173829 - 4173740
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 43507167 - 43507256
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 43508742 - 43508653
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 2693373 - 2693230
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||  |  || |||||||| ||||||||||||||||  ||||||||| | | ||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattttaaa-atgtccat 2693275  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||||||| |||||||| ||| ||| |||||| |||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 20493827 - 20493916
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||   |||||||||| ||||||||||||||| |||||||||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 33264382 - 33264471
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||| | ||||| |||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 51013975 - 51013886
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||| | | |||||||||||||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 470 - 554
Target Start/End: Original strand, 48645252 - 48645336
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  |||||||||| |||||||||||||||||    
T  48645252 atagactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 4169685 - 4169775
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| |||||||| |||||| |  ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  4169685 agactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 35996100 - 35996198
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    |||| |||||||||| || |||| ||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||    
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagtgctccgttag 35996198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 319273 - 319362
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | ||||| |||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 562
Target Start/End: Original strand, 11254123 - 11254208
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||| ||||| || ||| |||| |||||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaattt 11254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 559
Target Start/End: Complemental strand, 320989 - 320903
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaa 559  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||| ||  |||||||||| ||||||| | ||||||| ||||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 592
Target Start/End: Original strand, 47941848 - 47941930
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 592
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| ||||||| ||||  |||||||||||  |||||||||||||||| |    
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  583 gtccctccgt 592  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 474 - 563
Target Start/End: Original strand, 20819986 - 20820075
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    ||||||||||||| ||||||| |||||||| ||||||| | ||||||  |  || ||||||||||||||| |||||||||||||||||||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 33266099 - 33266010
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||| ||||||||||| | |||||||| |||||||||| || |||||  ||||||||||| ||||||| | |||||||||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 592
Target Start/End: Complemental strand, 44794866 - 44794765
Alignment:
Q  491 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 590  Q
    ||||||||||||| | |  |||| |||||||||| || |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||    
T  44794866 gtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctcc 44794767  T
Q  591 gt 592  Q
    ||    
T  44794766 gt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 596
Target Start/End: Original strand, 7149542 - 7149662
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||| | |||||| ||| |||||||| ||||||| ||| ||||| ||| | |||||||| |||||| |||||  ||| ||||||| ||| | ||| ||    
T  7149542 taatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaat 7149641  T
Q  576 caaaatggtccctccgtccaa 596  Q
    |||||||||||||||||||||    
T  7149642 caaaatggtccctccgtccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 563
Target Start/End: Original strand, 2691396 - 2691463
Alignment:
Q  496 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 563  Q
    |||||||| ||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||    
T  2691396 tgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 596
Target Start/End: Complemental strand, 44558580 - 44558494
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 596  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||| |||||||||    
T  44558580 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 833223 - 833312
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 5439736 - 5439647
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 592
Target Start/End: Original strand, 10762591 - 10762700
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |    
T  10762591 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 10762690  T
Q  583 gtccctccgt 592  Q
    ||||||||||    
T  10762691 gtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 39083649 - 39083776
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  39083649 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39083748  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  39083749 gtccctccgtccaaaaggtccgttagtg 39083776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 2350594 - 2350496
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 608  Q
    ||||||||||| ||| || |||| ||| ||||||| ||||| || ||||||||  ||||||| |||||||| |||||||| ||||||  ||||||||||    
T  2350594 tcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaaaggtccctctgtccaagtgctccgttag 2350496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 5437811 - 5437900
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| |||||||||| || |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 562
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  478 atacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||| || | |||||||| ||||||| | ||| ||||| | |||||||||| ||||||| | |||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 592
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| || ||| ||||||| | | ||||||| |  ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  573 catcaaaatggtccctccgt 592  Q
     |||||| | ||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 2827417 - 2827527
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||||||||||||| |||||| | |  ||||||||   |||| || |||| ||  ||||||| | ||||||| |||||||  |||||||||||||||| |    
T  2827417 tcaaattcgtccctaaattttcacacgtcggccaa---cgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 2827513  T
Q  583 gtccctccgtccaa 596  Q
    ||||||||||||||    
T  2827514 gtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 508 - 607
Target Start/End: Complemental strand, 13451069 - 13450970
Alignment:
Q  508 aatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtta 607  Q
    |||| |||||||||||| |  |||||  | ||||||| |  |||||| |||||||  |||||||||||||||||||||||||| |||||| |||| ||||    
T  13451069 aatcagccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta 13450970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 610
Target Start/End: Original strand, 39921504 - 39921631
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  39921504 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39921603  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  39921604 gtccctccgtccaaaaggtccgttagtg 39921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 610
Target Start/End: Complemental strand, 43779981 - 43779854
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  43779981 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 43779882  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  43779881 gtccctccgtccaaaaggtccgttagtg 43779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 610
Target Start/End: Original strand, 44972489 - 44972548
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||| ||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  44972489 gtccctaaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 44972548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 42982541 - 42982452
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||| | |||||  ||| |||||||| ||||||| | |||||||||| ||||||||||| |||||  ||||| |||| |||||||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaattt 42982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 610
Target Start/End: Original strand, 5484577 - 5484677
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T
Q  610 g 610  Q
    |    
T  5484677 g 5484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 607
Target Start/End: Original strand, 39189392 - 39189516
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  39189392 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39189491  T
Q  583 gtccctccgtccaaaagctccgtta 607  Q
    ||||||||||||||||| |||||||    
T  39189492 gtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 554
Target Start/End: Complemental strand, 54387973 - 54387890
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    |||||| |||| || |||||||||| | |||||| ||||||| |||||||| ||  || |||||||| |||||||||||||||||    
T  54387973 atagaccaatatcttaaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcc 54387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 39923088 - 39923009
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||| |||||||||||||||| | |  |||||||| |||||| || |||| ||| ||||||| ||||| |||||||||||    
T  39923088 tcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 585
Target Start/End: Original strand, 27624848 - 27624918
Alignment:
Q  515 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 585  Q
    ||||||| ||| | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||    
T  27624848 caaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 27624918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 562
Target Start/End: Original strand, 34460261 - 34460314
Alignment:
Q  509 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| ||||| |||||    
T  34460261 atcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaattt 34460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 610
Target Start/End: Original strand, 32652136 - 32652236
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||| |  |||||  | ||||||| |  |||||| |||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T
Q  610 g 610  Q
    |    
T  32652236 g 32652236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 44792971 - 44793023
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  44792971 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 610
Target Start/End: Complemental strand, 44994374 - 44994274
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | |||||||| |||||||| |||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T
Q  610 g 610  Q
    |    
T  44994274 g 44994274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 603
Target Start/End: Original strand, 50131240 - 50131292
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 603  Q
    |||||||||||| ||| |||||||||||||| |||  |||||||||| |||||    
T  50131240 gtccctgaatttgacaaacgtccatcaaaatagtcattccgtccaaatgctcc 50131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 617
Target Start/End: Complemental strand, 32439215 - 32439071
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||| || |||||| |||||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 617
Target Start/End: Original strand, 32516877 - 32517021
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 474 - 620
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 573  Q
    |||||||| |||||||| |||  ||||||| ||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  574 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 476 - 620
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    |||||||||||||||||   |||||||| |||||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 6899485 - 6899632
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||||| |||| |||||||| ||||||| | ||||||||||||| |||||||  ||||||||||||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 474 - 617
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  474 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 573  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||   ||||||||||| | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  574 atcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    | ||||||||||||||||||||||||||||| ||||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 13613706 - 13613559
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 477 - 620
Target Start/End: Original strand, 10568403 - 10568546
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatc 576  Q
    ||||| |||||||||||| |||||||| ||||||| | ||||||||||  ||||||| || |||||| |||||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  577 aaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 525 - 620
Target Start/End: Original strand, 9398712 - 9398807
Alignment:
Q  525 tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9398712 tctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 470 - 554
Target Start/End: Complemental strand, 10570011 - 10569927
Alignment:
Q  470 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  10570011 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcc 10569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 488 - 620
Target Start/End: Complemental strand, 14338584 - 14338452
Alignment:
Q  488 ttcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccc 587  Q
    ||||||| |||||||| ||||||| ||||||||||||    |||||||| |||| |||| ||  ||||||||||| ||||||||||||||||||||||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  588 tccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||| |||||||||||||| || |||||||||    
T  14338484 tccgttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 7049835 - 7049904
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 491 - 618
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  491 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 590  Q
    |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||| |||||||||||||||   ||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  591 gtccaaaagctccgttagtggtgatgat 618  Q
    ||||||||  ||||||| | ||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 32456015 - 32455868
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||| ||||||||| ||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    |||||||   ||||||||||||||||  ||||||| |  |||||||||    
T  32455915 catcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 11357284 - 11357194
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| | |||||||||||||||||    
T  11357284 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 32518587 - 32518497
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||    
T  32518587 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 18645193 - 18645104
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||| ||||||| | ||||||| |||||||    
T  18645193 agactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaattt 18645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 7371175 - 7371264
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||  ||||| |||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| ||||||| | ||||||| ||  |||||||||| ||||||||| |||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 20525423 - 20525334
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||  |||||||| |||||| || ||||||| || ||||||||||||||||| |||||| |||| |||||||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 608
Target Start/End: Complemental strand, 3018541 - 3018421
Alignment:
Q  488 ttcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccc 587  Q
    |||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccc 3018442  T
Q  588 tccgtccaaaagctccgttag 608  Q
    ||| |||||  ||||||||||    
T  3018441 tccatccaagtgctccgttag 3018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 473 - 552
Target Start/End: Complemental strand, 7051334 - 7051255
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagt 552  Q
    ||||||||||| |||||||    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  7051334 gactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 538
Target Start/End: Complemental strand, 8605416 - 8605349
Alignment:
Q  471 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaa 538  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||| || ||||||||||    
T  8605416 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgcaa 8605349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 554
Target Start/End: Complemental strand, 6902987 - 6902906
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||||||||||||| |||||||| ||||||| | |||||||||| || ||||||||  ||||||||||||||||    
T  6902987 agactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgc-gaatatctatttagtcc 6902906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 3480746 - 3480657
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| |  ||||||||||||||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 32454248 - 32454337
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| ||||||  |||||||| | ||||||| | |||||||||||||||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 551
Target Start/End: Original strand, 33276805 - 33276879
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttag 551  Q
    |||| ||||| ||||||| |||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag 33276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 554
Target Start/End: Original strand, 13610690 - 13610771
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||| |||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| ||||||| | |||||||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 592
Target Start/End: Original strand, 29077338 - 29077447
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |    
T  29077338 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 29077437  T
Q  583 gtccctccgt 592  Q
    ||||||||||    
T  29077438 gtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 541
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 541  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| |||||| ||||||||||| ||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 514 - 592
Target Start/End: Original strand, 2968180 - 2968258
Alignment:
Q  514 ccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    ||||||||||| || |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| ||||| |||||    
T  2968180 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 592
Target Start/End: Original strand, 4641392 - 4641474
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    ||||||||||||||| || |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||| |||||||||||    
T  4641392 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 610
Target Start/End: Complemental strand, 17952156 - 17952029
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  17952156 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 17952057  T
Q  583 gtccctccgtccaaaagctccgttagtg 610  Q
    ||||||||||||||||| ||||||||||    
T  17952056 gtccctccgtccaaaaggtccgttagtg 17952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 554
Target Start/End: Original strand, 21068628 - 21068706
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 554  Q
    ||||||||||||||||||| |||||||| || |||| | ||||||||||    |||||| | |||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcc 21068706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 592
Target Start/End: Original strand, 29112337 - 29112419
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  29112337 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  477 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 534  Q
    |||| ||||||||| ||| |||||||| ||||||| |||||||||||| |||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Original strand, 11163875 - 11163940
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  11163875 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 11163940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 529 - 602
Target Start/End: Original strand, 30891180 - 30891253
Alignment:
Q  529 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 602  Q
    |||| ||||||||||   ||||||||||||||||  |||||||||| |||| | ||||||||||||||| ||||    
T  30891180 aattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaagtagtccctccgtccaaatgctc 30891253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 35175977 - 35175861
Alignment:
Q  483 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 582  Q
    |||| ||||||| |||||||| |   ||||||||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  |     
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  583 gtccctccgtccaaaag 599  Q
    |||||||||||||||||    
T  35175877 gtccctccgtccaaaag 35175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 25172154 - 25172097
Alignment:
Q  552 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 609  Q
    ||||||||||| ||| |||||||| ||||| |||| |||||||||| ||||| |||||    
T  25172154 tccctgaatttaacaaacgtccataaaaatagtccttccgtccaaatgctccattagt 25172097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 520
Target Start/End: Original strand, 21091109 - 21091153
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaatt 520  Q
    ||||||||||||||||||| |||||||| |||||||  |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatcaaccaaatt 21091153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 476 - 617
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  476 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 575  Q
    ||||||||||||| ||||| ||||||||||||||| ||  |||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  576 caaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 475 - 617
Target Start/End: Original strand, 8264 - 8404
Alignment:
Q  475 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 574  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  575 tcaaaatggtccctccgtccaaaagctccgttagtggtgatga 617  Q
    |||||||||| | |||||||||||||| |||||||||||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 96; Significance: 9e-47; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 3294 - 3441
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 4466 - 4613
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 572  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  573 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 620  Q
    ||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 14432 - 14343
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 1645 - 1555
Alignment:
Q  472 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| | |||||||||||||||||    
T  1645 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 54347 - 54258
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 618
Target Start/End: Original strand, 37282 - 37349
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgat 618  Q
    |||| ||||||||||||||||| |||||||||||  |||| ||||||| |||||||| ||||||||||    
T  37282 gtccatgaattttacagacgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgat 37349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 510 - 592
Target Start/End: Complemental strand, 6721 - 6639
Alignment:
Q  510 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 592  Q
    ||||||||||||||| || |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||| |||||||||||    
T  6721 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 562
Target Start/End: Original strand, 982 - 1071
Alignment:
Q  473 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 562  Q
    ||||||||||||||| | |||| |||||||| |||||||||| || |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 469 - 549
Target Start/End: Original strand, 436261 - 436341
Alignment:
Q  469 gatagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctattt 549  Q
    |||||| ||| ||||||||||||| | |||||||| ||||||| ||||||||| ||  | |||||||| ||||||||||||    
T  436261 gatagagtaacacctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 36899 - 36834
Alignment:
Q  548 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 613  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  36899 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 36834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 30517 - 30458
Alignment:
Q  551 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 610  Q
    |||||||||||| ||| ||||| |||||||| || | |||||||||| ||||||||||||    
T  30517 gtccctgaatttaacaaacgtcaatcaaaatagttcttccgtccaaatgctccgttagtg 30458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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