View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2941_low_11 (Length: 242)
Name: NF2941_low_11
Description: NF2941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2941_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 11133697 - 11133469
Alignment:
| Q |
1 |
ctctcagaaagaggaacaatgccatctttcccatgaaatagcttaaaagccatatcaaaactaggaccatcttcaaatataggacccttggctccatgca |
100 |
Q |
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| T |
11133697 |
ctctcagaaagaggaacaatgccatctttcccatgaaatagcttaaaagccatatcaaaactaggaccatcttcaaatataggacccttggctccatgca |
11133598 |
T |
|
| Q |
101 |
cctgagcaacgagaatgaagtaaattagctcgaacttgaactagcaggatagaagacaggtgaaaagggaacaaagatgaattaacttacaggaatggag |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11133597 |
cctgagcaacaagaatgaagtaaattagctcgaacttgaactagcaggatagaagacaggtgaaaagggaacaaagatgaattaacttacaggaatggag |
11133498 |
T |
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| Q |
201 |
aattttgttgaagcaaaagagaagtttgt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
11133497 |
aattttgttgaagcaaaagagaagtttgt |
11133469 |
T |
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