View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2942-Insertion-2 (Length: 165)
Name: NF2942-Insertion-2
Description: NF2942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2942-Insertion-2 |
 | |
|
| [»] chr5 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 148; Significance: 2e-78; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 2e-78
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 1346754 - 1346599
Alignment:
| Q |
10 |
tagcagaatctttgtttggtttgtggtgtgttgttctgctaatatatcaacctgttcgtttgtctgctgtcaatttcatcttctgccgagggctttttga |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1346754 |
tagcagaatctttgtttggtttgtggtgtgttgttctgctaatagatcaacttgttcgtttgtctgctgtcaatttcatcttctgccgagggctttttga |
1346655 |
T |
|
| Q |
110 |
tgtcgtgtctgaccggaaatttgtgtttggccgttttaacttgcaattagcttttg |
165 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1346654 |
tgtcgtgtctgaccggaaatttgtgtttggccgttttaacttgcaattagcttttg |
1346599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University