View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2943_low_7 (Length: 328)
Name: NF2943_low_7
Description: NF2943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2943_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 315
Target Start/End: Original strand, 36635140 - 36635441
Alignment:
| Q |
18 |
tttattacttattacgtggatataataaagtggaaacctctaactctagtgagtagagttttatcttaactgtaatannnnnnnnn-ctatgaaat-ttg |
115 |
Q |
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| T |
36635140 |
tttattacttattacgtggatataataaagtggaaacctctaactctagtgagtagagttttatcttaactgtaatattttttttttctatgaaaaattg |
36635239 |
T |
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| Q |
116 |
gtggtaggtttttaa-ttataattaattacttcacatttacactatatatgttcccatcatcgcaccttttgtagtttatttatttatttattagtcatt |
214 |
Q |
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||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36635240 |
gtggtaggtttttaaattataattgattagttcacatttacactatatatgttcccatcatcgcaccttttgtagtttatttatttatttattagtcatt |
36635339 |
T |
|
| Q |
215 |
ctgtctcctacagcatgaatttatgtatgcttcttaatctctttatatatcat-tgcaatatttattttacttttatgtttcatattccatgtaatatat |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36635340 |
ctgtctcctacagcatgaatttatgtatgcttcttaatctctttatatatcatatgcaatatttattttacttttatgtttcatattccatgtaatatat |
36635439 |
T |
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| Q |
314 |
ta |
315 |
Q |
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|| |
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| T |
36635440 |
ta |
36635441 |
T |
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