View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2945_low_1 (Length: 447)
Name: NF2945_low_1
Description: NF2945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2945_low_1 |
 |  |
|
| [»] scaffold0041 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 194 - 430
Target Start/End: Complemental strand, 44497652 - 44497416
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44497652 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
44497553 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcgggccacgggtttatcgggcgggtatgtgcggttttgaagattcagnnnnnnnnnnnnnnncagtatagtatcctccga |
393 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| | |
|
|
| T |
44497552 |
ttgtacgggttcgggtctttcgggtcacgggtttatcgggtgggtatgagcggttttgaagattcagaaaaaaatgaaaaaacagtatagtatcctcaaa |
44497453 |
T |
 |
| Q |
394 |
tctgtgtatgcatcaacacaccaaccaagatgaagaa |
430 |
Q |
| |
|
||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
44497452 |
tctatgtattcatcaacacaccaaccaagatgaagaa |
44497416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 187 - 430
Target Start/End: Complemental strand, 29830063 - 29829827
Alignment:
| Q |
187 |
atatatttaggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttctt |
286 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29830063 |
atatatataggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttccacccatttttctt |
29829964 |
T |
 |
| Q |
287 |
cttcggtttgtacgggttcgggtctttcgggccacgggtttatcgggcgggtatgtgcggttttgaagattcag--nnnnnnnnnnnnnnncagtatagt |
384 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||| | |
|
|
| T |
29829963 |
cttcggtttgtacgggttcgggt---------cacgggtttatcgggtgggtatgtgcagttttgaagattcagaaaaaaaaatgaaaaaacagtataat |
29829873 |
T |
 |
| Q |
385 |
atcctccgatctgtgtatgcatcaacacaccaaccaagatgaagaa |
430 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29829872 |
atcctcagatctgtgtatgcatcaacacaccaaccaagatgaagaa |
29829827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 2063950 - 2064074
Alignment:
| Q |
193 |
ttaggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcgg |
292 |
Q |
| |
|
||||||||||||| |||||||||||||| | || || ||||| | |||||||||||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
2063950 |
ttaggggtggacaacgggcgggttcgggtctgaaagctcgacccagctcaacccgcggtttgtgtgtacagacccatttaaactagcttttcttcttcgg |
2064049 |
T |
 |
| Q |
293 |
tttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
2064050 |
tttgcacgggttcgggtctttcggg |
2064074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 14539937 - 14539905
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaa |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
14539937 |
taggggtggacatcgggcgggttcggacccaaa |
14539905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 143; Significance: 6e-75; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 206 - 430
Target Start/End: Complemental strand, 28994305 - 28994077
Alignment:
| Q |
206 |
tcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggtttgtacgggttc |
305 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28994305 |
tcgggagggttcgggcccaaaccttcaacccataccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggtttgtacgggttt |
28994206 |
T |
 |
| Q |
306 |
gggtctttcgggccacgggtttatcgggcgggtatgtgcggttttgaagattcag----nnnnnnnnnnnnnnncagtatagtatcctccgatctgtgta |
401 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28994205 |
gggtctttcgggccacaggtttatcgagcgggtatgtgcggttttgaagattcagagaaaaaaaaatgaaaaaacagtatagtatcctccgatctgtgta |
28994106 |
T |
 |
| Q |
402 |
tgcatcaacacaccaaccaagatgaagaa |
430 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
28994105 |
tgtatcaacacaccaaccaagatgaagaa |
28994077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 16296575 - 16296628
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccg |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
16296575 |
taggggtggacatcgggcgggttcgggcccaaagtggcagcccatcccaacccg |
16296628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 16304277 - 16304330
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccg |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
16304277 |
taggggtggacatcgggcgggttcgggcccaaagtggcagcccatcccaacccg |
16304330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 194 - 430
Target Start/End: Complemental strand, 1606313 - 1606083
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1606313 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
1606214 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcgggccacgggtttatcgggcgggtatgtgcggttttgaagattcag---nnnnnnnnnnnnnnncagtatagtatcctc |
390 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1606213 |
ttgtacgggtttgggt---------cacgggtttatcgggtgggtatgtgcggttttgaagattcagaaaaaaaaaatgaaaaaacagtatagtatcctc |
1606123 |
T |
 |
| Q |
391 |
cgatctgtgtatgcatcaacacaccaaccaagatgaagaa |
430 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1606122 |
agatctgtgtatgcatcaacacaccaaccaagatgaagaa |
1606083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 12190907 - 12190872
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaacct |
229 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12190907 |
taggggtggacatcgggcgggttcgggtccaaacct |
12190872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 198 - 359
Target Start/End: Complemental strand, 22049397 - 22049236
Alignment:
| Q |
198 |
ggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggtttgt |
297 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| |||||| |||||||| ||| |||||||| ||| |||||||||| ||||||| ||||||||||||||| |
|
|
| T |
22049397 |
ggtggacatcgggcgggttcaggcccgaaccctcaacctatcccaactcgcagtttgtgtatagagacccatttctgcccatttctcttcttcggtttgt |
22049298 |
T |
 |
| Q |
298 |
acgggttcgggtctttcgggccacgggtttatcgggcgggtatgtgcggttttgaagattca |
359 |
Q |
| |
|
|| |||||||||||| | || |||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
22049297 |
acaagttcgggtcttttgtatcatgggtttatcgggtggatatgtccggttttgaagattca |
22049236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 22894339 - 22894392
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccg |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
22894339 |
taggggtggacatcgggcgggttcgggcccaaagtggcagcccatcccaacccg |
22894392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 48580683 - 48580719
Alignment:
| Q |
280 |
ttttcttcttcggtttgtacgggttcgggtctttcgg |
316 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
48580683 |
ttttcttcttcggtttgcacgggttcgggtctttcgg |
48580719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 2351667 - 2351697
Alignment:
| Q |
196 |
ggggtggacatcgggcgggttcgggcccaaa |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2351667 |
ggggtggacatcgggcgggttcgggcccaaa |
2351697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 50442528 - 50442496
Alignment:
| Q |
189 |
atatttaggggtggacatcgggcgggttcgggc |
221 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
50442528 |
atatgtaggggtggacatcgggcgggttcgggc |
50442496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7144080 - 7144158
Alignment:
| Q |
1 |
gctcagacaaccaagcaagaagcgatggatgaaaagcttaatttgatactcaatctaatgagtagtagaaacacttggg |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
7144080 |
gctcagacaaccaagcaagaagcgatggatgaaaagcttaatttgataatcaatctgatgagtagtagaaacacttggg |
7144158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 7144198 - 7144272
Alignment:
| Q |
119 |
gtaactttaatcaacaatattaacgtgtattcaatgcttattctcattatcttttatgcaagctatgtatatatt |
193 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
7144198 |
gtaactttaatcaacaatattaacttgtatttaatgtttattctcaaaatcttttatgcaagctatgtatatatt |
7144272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 41120884 - 41120826
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtt |
252 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||| |
|
|
| T |
41120884 |
taggggtggacatcgggcgggttcgggtccaaagcacccacccagcccaacccgcggtt |
41120826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 5356701 - 5356733
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaa |
226 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
5356701 |
taggggtggacatcaggcgggttcgggcccaaa |
5356733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 8291334 - 8291362
Alignment:
| Q |
193 |
ttaggggtggacatcgggcgggttcgggc |
221 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8291334 |
ttaggggtggacatcgggcgggttcgggc |
8291362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 19867100 - 19866977
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||| |||||||||||||| | || || ||||| | |||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
19867100 |
taggggtggacaacgggcgggttcgggtctgaaagctcgacccagctcaacccgcggtttgtgtgtacagacccatttaagctagcttttcttcttcggt |
19867001 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
19867000 |
ttgcacgggttcgggtctttcggg |
19866977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 19872001 - 19871878
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||| |||||||||||||| | || || ||||| | |||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
19872001 |
taggggtggacaacgggcgggttcgggtctgaaagctcgacccagctcaacccgcggtttgtgtgtacagacccatttaagctagcttttcttcttcggt |
19871902 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
19871901 |
ttgcacgggttcgggtctttcggg |
19871878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 19876902 - 19876779
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||| |||||||||||||| | || || ||||| | |||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
19876902 |
taggggtggacaacgggcgggttcgggtctgaaagctcgacccagctcaacccgcggtttgtgtgtacagacccatttaagctagcttttcttcttcggt |
19876803 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
19876802 |
ttgcacgggttcgggtctttcggg |
19876779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 36585783 - 36585660
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtttgtgtgtagcaacccatttctacccatttttcttcttcggt |
293 |
Q |
| |
|
|||||||||||| |||||||||||||| | || || ||||| | |||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
36585783 |
taggggtggacaacgggcgggttcgggtctgaaagctcgacccagctcaacccgcggtttgtgtgtacagacccatttaagctagcttttcttcttcggt |
36585684 |
T |
 |
| Q |
294 |
ttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
36585683 |
ttgcacgggttcgggtctttcggg |
36585660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 19862445 - 19862408
Alignment:
| Q |
280 |
ttttcttcttcggtttgtacgggttcgggtctttcggg |
317 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19862445 |
ttttcttcttcggtttgcacgggttcgggtctttcggg |
19862408 |
T |
 |
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Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 14083994 - 14084029
Alignment:
| Q |
193 |
ttaggggtggacatcgggcgggttcgggcccaaacc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14083994 |
ttaggggtggacatcgggcgggttcgggcccaaacc |
14084029 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 5323092 - 5323124
Alignment:
| Q |
193 |
ttaggggtggacatcgggcgggttcgggcccaa |
225 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
5323092 |
ttaggggtgggcatcgggcgggttcgggcccaa |
5323124 |
T |
 |
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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 39289023 - 39289067
Alignment:
| Q |
206 |
tcgggcgggttcgggcccaaaccttcaacccatcccaacccgcgg |
250 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || ||||||||| |
|
|
| T |
39289023 |
tcgggcgggttcgggcccaaaccctccacccagccgaacccgcgg |
39289067 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 39384313 - 39384269
Alignment:
| Q |
206 |
tcgggcgggttcgggcccaaaccttcaacccatcccaacccgcgg |
250 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || ||||||||| |
|
|
| T |
39384313 |
tcgggcgggttcgggcccaaaccctccacccagccgaacccgcgg |
39384269 |
T |
 |
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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 39384336 - 39384308
Alignment:
| Q |
193 |
ttaggggtggacatcgggcgggttcgggc |
221 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
39384336 |
ttaggggtggacatcgggcgggttcgggc |
39384308 |
T |
 |
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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 102265 - 102323
Alignment:
| Q |
194 |
taggggtggacatcgggcgggttcgggcccaaaccttcaacccatcccaacccgcggtt |
252 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||| |
|
|
| T |
102265 |
taggggtggacatcgggcgggttcgggtccaaagcacccacccagcccaacccgcggtt |
102323 |
T |
 |
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