View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2950_low_15 (Length: 258)
Name: NF2950_low_15
Description: NF2950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2950_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 41945733 - 41945973
Alignment:
| Q |
3 |
tgagatgaagaagaggaagaaattatatagaaaaaa-tcctgaattttgtggttgaactttcctaggaactttgtccttggaagcacatattttcaaaaa |
101 |
Q |
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| T |
41945733 |
tgagaagaagaagaggaagaaattatatagaaaaaaatcatgaattttgtggttgaactttcctaggaactttgtccttggaagcacatattttcaaaaa |
41945832 |
T |
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| Q |
102 |
attaaatttcttaaaagttttcctcttgttggtttgattccaactccaagaccacgatataccctaatctttttctacaattgattgaaaagcttcatta |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41945833 |
attaaatttcttaaaagttttcctcttgttggtttgattccaactccaagaccacgatataccctaatctttttctacaattgattgaaaagcttcatta |
41945932 |
T |
|
| Q |
202 |
agagccatttgccataactatagaaaattgtgctctttccc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
41945933 |
agagccatttgccataactatagaaaattgtgctctttccc |
41945973 |
T |
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