View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_high_10 (Length: 390)
Name: NF2951_high_10
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 9 - 375
Target Start/End: Original strand, 43412617 - 43412983
Alignment:
| Q |
9 |
atgaaataatattacatactgtgttcaatgccatgtttgagaatctttgttattaattctaattcaattttgacattctatgaaaacgtttgattcagct |
108 |
Q |
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| T |
43412617 |
atgaaataatattacatactgtgttcaatgccatgtttgagaatctttgttattaattctaattcaattttgacattctatgaaaacgtttgattcagct |
43412716 |
T |
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| Q |
109 |
cnnnnnnnnactatcaaaaaactcatcaatattgctgccccaactatatagtatactcccttagcatgtctcgaatgaatatactcttgccctaagtctc |
208 |
Q |
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| T |
43412717 |
cttttttttactatcaaaaaactcatcaatattgctgccccaactatatagtatactcccttagcatgtctcgaatgaatatactcttgccctaagtctc |
43412816 |
T |
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| Q |
209 |
tccttagcatggtttatcataggtttgccttgcctagtttagattcgctttcttaatggattcatgggtgcaatatatatagttggggttaaccatttta |
308 |
Q |
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| T |
43412817 |
ttcttagcatggtttatcataggtttgccttgcctagtttagattcgctttcttaatggattcatgggtgcaatatatatagttggggttaaccatttta |
43412916 |
T |
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| Q |
309 |
taatgatgtctttacactttattttaacttttnnnnnnntattacatcttctattttatcatgttca |
375 |
Q |
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||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
43412917 |
taatgatgtatttacactttattttaacttttaaaaaaatattacatcttctattttatcatgttca |
43412983 |
T |
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