View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_high_13 (Length: 335)
Name: NF2951_high_13
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 12 - 320
Target Start/End: Original strand, 31036835 - 31037143
Alignment:
| Q |
12 |
actcatcaaatgcgctggatggcaaaggcgttggcgtttggtctaatggagggccgatggccagtgaatggaaaagatcgtatacagagaaggttgcatc |
111 |
Q |
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| T |
31036835 |
actcatcaaatgcgctggatggcaaaggcgttggcgtatggtctaatggagggccgagggccagtgaatggaaaaaatcgtatacagagaaggttgtatc |
31036934 |
T |
|
| Q |
112 |
gtgtaaaagtatatagagaagctgatacaaagttggattatttgacattaaggtttggtcaagtttcttaaagcttgtgtggtaccttagttgaaaacat |
211 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31036935 |
gtgtaaaagtatatagagaagctgagacaaagttggattatttgacattaaggtttggtcaagtttcttaaagcttgtgtggtaccttagttgaaaacat |
31037034 |
T |
|
| Q |
212 |
agtatattacaggtacattctcattctgatgtagtttgtagacgaaggaaaaggtactattcctttttgaacattctctctcagctctattttcttcctt |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31037035 |
agtatattacaggtacattctcattctgatgtagtttgtagacgaaggaaaaggtactattcctttttgaacattctctctcagctctattttcttcctt |
31037134 |
T |
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| Q |
312 |
cttaaagat |
320 |
Q |
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||||||||| |
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| T |
31037135 |
cttaaagat |
31037143 |
T |
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