View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2951_high_22 (Length: 251)

Name: NF2951_high_22
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2951_high_22
NF2951_high_22
[»] chr4 (24 HSPs)
chr4 (13-251)||(33045129-33045367)
chr4 (13-87)||(6257406-6257480)
chr4 (13-87)||(24287871-24287945)
chr4 (13-87)||(33458468-33458542)
chr4 (15-224)||(32284566-32284776)
chr4 (12-87)||(33461593-33461668)
chr4 (13-84)||(10739543-10739614)
chr4 (13-84)||(10953312-10953383)
chr4 (13-68)||(26957023-26957078)
chr4 (112-202)||(28716204-28716295)
chr4 (148-206)||(6257258-6257316)
chr4 (148-206)||(10733299-10733357)
chr4 (148-206)||(10947068-10947126)
chr4 (13-87)||(48160844-48160918)
chr4 (13-87)||(48167063-48167137)
chr4 (13-86)||(4632266-4632339)
chr4 (13-87)||(44831818-44831894)
chr4 (148-212)||(10739386-10739450)
chr4 (148-212)||(10953155-10953219)
chr4 (13-84)||(10733556-10733627)
chr4 (13-84)||(10947325-10947396)
chr4 (148-206)||(24288035-24288093)
chr4 (148-206)||(50168641-50168699)
chr4 (13-69)||(35177681-35177737)
[»] scaffold0208 (4 HSPs)
scaffold0208 (13-87)||(6407-6481)
scaffold0208 (13-87)||(12280-12354)
scaffold0208 (148-206)||(12444-12502)
scaffold0208 (148-206)||(6571-6629)
[»] chr8 (19 HSPs)
chr8 (13-87)||(5542361-5542435)
chr8 (13-87)||(32890773-32890847)
chr8 (13-87)||(32896897-32896971)
chr8 (13-87)||(36818856-36818930)
chr8 (13-87)||(42993204-42993278)
chr8 (15-87)||(10699916-10699988)
chr8 (13-87)||(22219928-22220002)
chr8 (13-68)||(42033685-42033740)
chr8 (13-87)||(9935163-9935237)
chr8 (13-87)||(10705722-10705796)
chr8 (13-63)||(14417825-14417875)
chr8 (13-68)||(1883039-1883094)
chr8 (16-68)||(39727528-39727580)
chr8 (143-206)||(14799469-14799532)
chr8 (143-206)||(42993057-42993120)
chr8 (148-206)||(5542213-5542271)
chr8 (115-198)||(10700042-10700127)
chr8 (148-206)||(14417989-14418047)
chr8 (32-68)||(1171249-1171285)
[»] chr7 (20 HSPs)
chr7 (13-87)||(20238835-20238909)
chr7 (13-87)||(28421160-28421234)
chr7 (13-87)||(339264-339338)
chr7 (13-87)||(351671-351745)
chr7 (13-87)||(3811370-3811444)
chr7 (13-87)||(3817512-3817586)
chr7 (13-87)||(5979375-5979449)
chr7 (13-83)||(15843831-15843901)
chr7 (13-83)||(15860940-15861010)
chr7 (15-68)||(5849416-5849469)
chr7 (13-87)||(35150740-35150816)
chr7 (13-61)||(35148236-35148284)
chr7 (148-206)||(339419-339477)
chr7 (148-206)||(351834-351892)
chr7 (148-206)||(3811222-3811280)
chr7 (148-206)||(3817364-3817422)
chr7 (148-206)||(20238999-20239057)
chr7 (148-206)||(28421012-28421070)
chr7 (148-202)||(43540033-43540087)
chr7 (13-87)||(43539864-43539940)
[»] chr6 (14 HSPs)
chr6 (13-87)||(8651004-8651078)
chr6 (13-87)||(25343509-25343583)
chr6 (13-87)||(25354096-25354170)
chr6 (13-87)||(4580522-4580596)
chr6 (19-84)||(21191070-21191135)
chr6 (13-61)||(21770794-21770842)
chr6 (13-68)||(21197250-21197305)
chr6 (156-206)||(31756268-31756318)
chr6 (13-68)||(31756440-31756495)
chr6 (148-206)||(8650856-8650914)
chr6 (148-206)||(8662834-8662892)
chr6 (148-206)||(21782806-21782864)
chr6 (148-206)||(32035339-32035397)
chr6 (143-212)||(25343667-25343736)
[»] chr5 (16 HSPs)
chr5 (13-87)||(12686380-12686454)
chr5 (13-87)||(12692482-12692556)
chr5 (16-87)||(41297170-41297241)
chr5 (13-87)||(7389748-7389822)
chr5 (13-87)||(14610053-14610127)
chr5 (13-87)||(32094422-32094496)
chr5 (13-87)||(32097223-32097297)
chr5 (13-68)||(19059991-19060046)
chr5 (13-87)||(30772166-30772242)
chr5 (13-68)||(19066332-19066387)
chr5 (148-206)||(12686232-12686290)
chr5 (148-206)||(12692334-12692392)
chr5 (13-87)||(20500023-20500097)
chr5 (148-206)||(24054383-24054441)
chr5 (13-87)||(28525587-28525661)
chr5 (25-88)||(30384585-30384649)
[»] chr3 (31 HSPs)
chr3 (13-87)||(11839926-11840000)
chr3 (13-87)||(13837558-13837632)
chr3 (13-87)||(17055994-17056068)
chr3 (13-87)||(38449264-38449338)
chr3 (13-87)||(38455751-38455825)
chr3 (13-84)||(10238416-10238487)
chr3 (13-84)||(10244538-10244609)
chr3 (13-87)||(8331671-8331745)
chr3 (13-87)||(10769170-10769244)
chr3 (13-87)||(42191421-42191495)
chr3 (13-87)||(42197363-42197437)
chr3 (13-87)||(10760851-10760925)
chr3 (13-63)||(26429642-26429692)
chr3 (13-87)||(30051303-30051377)
chr3 (13-62)||(13444942-13444991)
chr3 (148-206)||(10760703-10760761)
chr3 (26-68)||(24643773-24643815)
chr3 (148-206)||(38449116-38449174)
chr3 (148-206)||(38455603-38455661)
chr3 (13-87)||(49151496-49151570)
chr3 (13-87)||(49157563-49157637)
chr3 (148-212)||(55003459-55003523)
chr3 (13-87)||(11846264-11846339)
chr3 (147-206)||(28964915-28964974)
chr3 (31-87)||(53069258-53069316)
chr3 (148-206)||(8331835-8331893)
chr3 (148-206)||(10244387-10244445)
chr3 (148-206)||(11839778-11839836)
chr3 (148-206)||(11846116-11846174)
chr3 (148-206)||(17055846-17055904)
chr3 (13-87)||(55003613-55003684)
[»] chr2 (19 HSPs)
chr2 (13-87)||(13149885-13149959)
chr2 (13-87)||(28683146-28683220)
chr2 (13-87)||(44717006-44717080)
chr2 (13-87)||(13455984-13456058)
chr2 (13-87)||(13461925-13461999)
chr2 (13-87)||(31008239-31008313)
chr2 (13-87)||(36750299-36750373)
chr2 (13-68)||(35084899-35084954)
chr2 (13-68)||(35090872-35090927)
chr2 (13-68)||(35438925-35438980)
chr2 (13-87)||(30965212-30965286)
chr2 (13-87)||(31002261-31002335)
chr2 (13-61)||(23343438-23343486)
chr2 (143-206)||(13149739-13149802)
chr2 (155-206)||(35438762-35438813)
chr2 (148-206)||(28682998-28683056)
chr2 (13-59)||(29034705-29034751)
chr2 (148-206)||(35090702-35090760)
chr2 (148-206)||(36750463-36750521)
[»] chr1 (19 HSPs)
chr1 (13-87)||(25381736-25381810)
chr1 (13-87)||(25387705-25387779)
chr1 (13-87)||(34739870-34739944)
chr1 (75-169)||(27395785-27395880)
chr1 (13-87)||(1078129-1078203)
chr1 (13-87)||(31051429-31051503)
chr1 (13-68)||(8093066-8093121)
chr1 (13-68)||(44409885-44409940)
chr1 (32-87)||(50306093-50306148)
chr1 (143-206)||(50306232-50306295)
chr1 (13-87)||(31057929-31058003)
chr1 (148-212)||(8092893-8092957)
chr1 (155-206)||(27955216-27955267)
chr1 (143-206)||(31058087-31058150)
chr1 (148-206)||(25387557-25387615)
chr1 (148-206)||(34740034-34740092)
chr1 (13-58)||(24926991-24927036)
chr1 (13-87)||(27955044-27955120)
chr1 (13-57)||(12183820-12183864)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-87)||(173091-173165)
[»] scaffold0440 (1 HSPs)
scaffold0440 (13-87)||(1395-1469)
[»] scaffold0363 (2 HSPs)
scaffold0363 (13-63)||(844-894)
scaffold0363 (148-206)||(672-730)
[»] scaffold0236 (1 HSPs)
scaffold0236 (148-206)||(5583-5641)
[»] scaffold1114 (1 HSPs)
scaffold1114 (13-62)||(968-1017)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 33045129 - 33045367
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagattgctgctagagaactctttcatcgt 112  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  33045129 agaacttgagatataaaagtaccggttgagaaagaactaaatcagccgccgttaacttttttatgtctttcagattgctgccagagaactctttcatcgt 33045228  T
Q  113 ggatccatatattcctaatacctttaatctatattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  33045229 ggatccagatattcctaatacctttaatctatattttgatagatcaaacaagttgtagatccgattataatcatgtttagttttttatttgcttctgcta 33045328  T
Q  213 atcatttatactactttgtattaaacatgtcttgtgaaa 251  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  33045329 atcatttatactactttgtattgaacatgtcttgtgaaa 33045367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 6257480 - 6257406
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  6257480 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 6257406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24287871 - 24287945
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  24287871 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 24287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 33458542 - 33458468
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||| | || ||||||||||||    
T  33458542 agaacttgaggcataaaggtatcggttgagaaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 33458468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 32284566 - 32284776
Alignment:
Q  15 aacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaactttt-ttatgtgtttcagattgctgctagagaactctttcatcgtg 113  Q
    |||||||| | |||| |||||| | ||| |||||||||||||| ||||  |||||||| | |||||||||| |||||||  | |||||  ||||||| ||    
T  32284566 aacttgaggcctaaaggtaccgatcgaggaagaaccaaatcagtcgccactaacttttctgatgtgtttcaaattgctg-aatagaacattttcatcatg 32284664  T
Q  114 gatccatatattcctaatacctttaatctatat-tttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    ||||||  |||||||||| |||| ||| ||||| ||||||| || ||||| ||| |||||  ||||||| || |||| ||| ||||||||| ||  ||||    
T  32284665 gatccaggtattcctaatgccttgaatttatatctttgataaataaaacatgttctagatctgattatattcctgttcaatattttatttgtttccgcta 32284764  T
Q  213 atcatttatact 224  Q
    || |||| ||||    
T  32284765 atgatttttact 32284776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 33461668 - 33461593
Alignment:
Q  12 aagaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||| | || ||||||||||||    
T  33461668 aagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagat 33461593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10739614 - 10739543
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||| ||||| |||||| ||| |||||||| |||||||||||||||||||| ||||| | || |||||||||    
T  10739614 agaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 10739543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10953383 - 10953312
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||| ||||| |||||| ||| |||||||| |||||||||||||||||||| ||||| | || |||||||||    
T  10953383 agaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 10953312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26957078 - 26957023
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||| ||||| ||||    
T  26957078 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaac 26957023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 28716204 - 28716295
Alignment:
Q  112 tggatccatatattcctaatacctttaatctatat-tttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttattt 202  Q
    |||||||| |||||  ||||||||||||||||||| |||||||||||||| | |||||||||   || ||| ||||| | ||||||||||||    
T  28716204 tggatccaaatatttttaatacctttaatctatatctttgatagatcaaatatgttgtagatctaatcatattcatgctcaatgttttattt 28716295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 6257316 - 6257258
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| |||||||| |||||||    
T  6257316 ttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgctt 6257258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10733357 - 10733299
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| ||||||||||||||||    
T  10733357 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgctt 10733299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10947126 - 10947068
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| ||||||||||||||||    
T  10947126 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgctt 10947068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 48160844 - 48160918
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  48160844 agaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 48160918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 48167063 - 48167137
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  48167063 agaacttgaggcataaaggtactggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 48167137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 4632266 - 4632339
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcaga 86  Q
    |||||||||| ||||||  ||||||||||| ||||||||||||||  |||| ||||| | || |||||||||||    
T  4632266 agaacttgaggcataaagataccggttgaggaagaaccaaatcagaagccgctaactatgttttgtgtttcaga 4632339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 44831894 - 44831818
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaa--cttttttatgtgtttcagat 87  Q
    |||||||||| ||||||| ||||||||||| |||||||| |||||||| || |||  || |||| ||||||||||||    
T  44831894 agaacttgaggcataaaaataccggttgaggaagaaccacatcagccgtcgctaaccctattttgtgtgtttcagat 44831818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10739450 - 10739386
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| ||||||| |||||    
T  10739450 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgcta 10739386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10953219 - 10953155
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| ||||||| |||||    
T  10953219 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgcta 10953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10733627 - 10733556
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||| ||||| |||||| ||| |||||||| ||||||||||||||||| || ||||| | || |||||||||    
T  10733627 agaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttca 10733556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10947396 - 10947325
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||| ||||| |||||| ||| |||||||| ||||||||||||||||| || ||||| | || |||||||||    
T  10947396 agaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttca 10947325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 24288035 - 24288093
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  24288035 ttgataaatcaaacatgtcgtagatacgatcataatcatgttcaatgttttgtttgctt 24288093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 50168641 - 50168699
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || ||| ||||||| ||||||||||| |||||||| |||||||    
T  50168641 ttgataaatcaaacatgtcgtatattcgatcataatcatgttcaatgttttgtttgctt 50168699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 35177681 - 35177737
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaact 69  Q
    |||||||||| |||||| ||| ||||||||||| || |||||||| ||||| |||||    
T  35177681 agaacttgaggcataaatgtatcggttgagaaataatcaaatcaggcgccgctaact 35177737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 6407 - 6481
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  6407 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 6481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 12280 - 12354
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  12280 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 12354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 12444 - 12502
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || ||||||||||| ||||| ||||| ||||||||||||||||    
T  12444 ttgataaatcaaacatgtcgtagattcgatcataattatgttcaatgttttatttgctt 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 6571 - 6629
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| |||||||||||  | ||||||||||| |||||||| |||||||    
T  6571 ttgataaatcaaacatgttgtagattcagtcataatcatgttcaatgttttgtttgctt 6629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 5542435 - 5542361
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  5542435 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 5542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 32890773 - 32890847
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  32890773 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 32890847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 32896897 - 32896971
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  32896897 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 32896971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 36818856 - 36818930
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  36818856 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 36818930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 42993278 - 42993204
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  42993278 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 42993204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 10699916 - 10699988
Alignment:
Q  15 aacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  10699916 aacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 10699988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 22220002 - 22219928
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||  ||||||| || | ||||||||||    
T  22220002 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccactaactttattgtttgtttcagat 22219928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 42033685 - 42033740
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||    
T  42033685 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 42033740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 9935163 - 9935237
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||| ||||| |||||||||||||||||||| ||| | | || ||||||||||||    
T  9935163 agaacttgaggcataaaggtaccgattgaggaagaaccaaatcagccgccgctaaatctattgtgtgtttcagat 9935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 10705722 - 10705796
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||||| || |||||| |||||||||||| ||||| |||||||||||||| ||||| | || ||||||||||||    
T  10705722 agaacttaagccataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagat 10705796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 14417825 - 14417875
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccg 63  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  14417825 agaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccg 14417875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 1883094 - 1883039
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| |||||||| ||||    
T  1883094 agaacttgagacataaaggtactggttgaggaagaaccaaattagccgccgctaac 1883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 39727580 - 39727528
Alignment:
Q  16 acttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| |||| ||||    
T  39727580 acttgaggcataaaggtaccggttgaggaagaaccaaatcagcagccgctaac 39727528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 14799532 - 14799469
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||| |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  14799532 atatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 14799469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 42993120 - 42993057
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||| |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  42993120 atatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 42993057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 5542271 - 5542213
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  5542271 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 5542213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 10700042 - 10700127
Alignment:
Q  115 atccatatattcctaatacctttaatct--atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgtttt 198  Q
    ||||| |||||||||||||| | | |||  |||| |||||| |||||||| || |||||| |||| ||||||||||| ||||||||    
T  10700042 atccagatattcctaataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 14417989 - 14418047
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  14417989 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 14418047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 1171249 - 1171285
Alignment:
Q  32 taccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  1171249 taccggttgaggaagaaccaaatcagccgccgctaac 1171285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 20238835 - 20238909
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  20238835 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 20238909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 28421234 - 28421160
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  28421234 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 28421160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 339264 - 339338
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||| | || ||||||||||||    
T  339264 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagat 339338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 351671 - 351745
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||| | || ||||||||||||    
T  351671 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagat 351745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 3811444 - 3811370
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  3811444 agaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 3811370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 3817586 - 3817512
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  3817586 agaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 3817512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 5979449 - 5979375
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  5979449 agaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 5979375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 15843831 - 15843901
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttc 83  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||||||||| ||||| | || ||||||||    
T  15843831 agaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttc 15843901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 15860940 - 15861010
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttc 83  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||||||||| ||||| | || ||||||||    
T  15860940 agaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttc 15861010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 5849416 - 5849469
Alignment:
Q  15 aacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||| |||||| |||||||||||| |||||||||||||| ||||| ||||    
T  5849416 aacttgaggcataaaggtaccggttgaggaagaaccaaatcagacgccgctaac 5849469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 35150816 - 35150740
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac--ttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||  || ||||||||||||||||| ||||  | |||| ||||||||||||    
T  35150816 agaacttgaggcataaaggtaccggttgaagaataaccaaatcagccgccgctaaccatattttgtgtgtttcagat 35150740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 35148284 - 35148236
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgc 61  Q
    |||| ||||| |||||| |||||||||||| ||||||||||||||||||    
T  35148284 agaatttgaggcataaaggtaccggttgaggaagaaccaaatcagccgc 35148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 339419 - 339477
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  339419 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 339477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 351834 - 351892
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  351834 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 351892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 3811280 - 3811222
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  3811280 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 3811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 3817422 - 3817364
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  3817422 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 3817364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 20238999 - 20239057
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  20238999 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 20239057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 28421070 - 28421012
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  28421070 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 28421012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 43540033 - 43540087
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttattt 202  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| ||| ||||||||    
T  43540033 ttgataaatcaaacatgttgtagatccgatcataatcatgttcaatattttattt 43540087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 43539864 - 43539940
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac--ttttttatgtgtttcagat 87  Q
    ||||||| || |||||| |||| ||||||| |||||||||||||| ||||| ||||  | |||| ||||||||||||    
T  43539864 agaactttaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaaccatattttgtgtgtttcagat 43539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 8651078 - 8651004
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  8651078 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 8651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 25343509 - 25343583
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  25343509 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 25343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 25354096 - 25354170
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  25354096 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 25354170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 4580596 - 4580522
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | ||  |||||||||||    
T  4580596 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagat 4580522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 21191135 - 21191070
Alignment:
Q  19 tgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || |||||||||    
T  21191135 tgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 21191070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 21770842 - 21770794
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgc 61  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  21770842 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgc 21770794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 21197305 - 21197250
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| ||||||  ||||||||||| |||||||||||||||||||| ||||    
T  21197305 agaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaac 21197250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 31756318 - 31756268
Alignment:
Q  156 tcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    ||||||| || |||||| |||||||||||||||| ||||||||||||||||    
T  31756318 tcaaacatgtcgtagatccgattataatcatgttcaatgttttatttgctt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 31756495 - 31756440
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    ||||||||||  ||||| ||||| |||||| |||||||||||||||||||| ||||    
T  31756495 agaacttgaggtataaaggtacctgttgaggaagaaccaaatcagccgccgctaac 31756440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 8650914 - 8650856
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  8650914 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 8650856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 8662892 - 8662834
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  8662892 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 8662834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 21782864 - 21782806
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  21782864 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 21782806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 32035397 - 32035339
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  32035397 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 32035339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 25343667 - 25343736
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    |||| |||||| |||||| | || |||||| |||| ||||||||||| |||||||| ||||||| |||||    
T  25343667 atatcttgataaatcaaaaatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttctgcta 25343736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 12686454 - 12686380
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  12686454 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 12686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 12692556 - 12692482
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  12692556 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 12692482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 41297170 - 41297241
Alignment:
Q  16 acttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  41297170 acttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 41297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 7389822 - 7389748
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||| ||||| ||||| | || ||||||||||||    
T  7389822 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagat 7389748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 14610053 - 14610127
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||||| ||||  |||| | ||||||||||    
T  14610053 agaactttaggcataaaagtaccggttgaggaagaaccaaatcagccgccgctaacccttttgtttgtttcagat 14610127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 32094496 - 32094422
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||||||||| |||||||| ||||| | || ||||||||||||    
T  32094496 agaacttgaggcataaaggtaccggttgaggaagaaccaaattagccgccgctaactctattgtgtgtttcagat 32094422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 32097297 - 32097223
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||| ||||||||||||| ||||| | || ||||||||||||    
T  32097297 agaacttgaggcataaaggtaccggttgaggaagaactaaatcagccgccgctaactctattgtgtgtttcagat 32097223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 19060046 - 19059991
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||| ||||    
T  19060046 agaacttgaggcataaaagtaccagttgaggaagaaccaaatcagccgccgctaac 19059991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 30772166 - 30772242
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaa--cttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||| |||||||||||||| |||  |||| || ||||||||||||    
T  30772166 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaaccctttgttgtgtgtttcagat 30772242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 19066387 - 19066332
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| ||||| ||||||||| |||| ||||    
T  19066387 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagctgccgctaac 19066332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 12686290 - 12686232
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  12686290 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 12686232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 12692392 - 12692334
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  12692392 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 12692334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 20500023 - 20500097
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| ||||||||| || ||||||||||||| |||| | |||| || || | ||||||||||    
T  20500023 agaacttgaggcataaatgtaccggttaaggaagaaccaaatcaaccgctgctaaccttcttgtttgtttcagat 20500097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 24054383 - 24054441
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  24054383 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 24054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 28525661 - 28525587
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||| |||| |||||| |||||||||||| ||||| |||||||||| ||| | ||| | || ||||||||||||    
T  28525661 agaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagat 28525587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 30384649 - 30384585
Alignment:
Q  25 ataaaagtaccggttgagaaagaaccaaatcagccgccgttaa-cttttttatgtgtttcagatt 88  Q
    ||||| |||||||||||| |||||||||||||| ||||| ||| || | || |||||||||||||    
T  30384649 ataaaggtaccggttgaggaagaaccaaatcagtcgccgctaagctatgttgtgtgtttcagatt 30384585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 11840000 - 11839926
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  11840000 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 11839926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 13837558 - 13837632
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  13837558 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 13837632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 17056068 - 17055994
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  17056068 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 17055994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 38449338 - 38449264
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  38449338 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 38449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 38455825 - 38455751
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  38455825 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 38455751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10238487 - 10238416
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || |||||||||    
T  10238487 agaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 10238416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10244609 - 10244538
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttca 84  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || |||||||||    
T  10244609 agaacttgaggcataaatgtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 10244538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 8331671 - 8331745
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||| ||||    
T  8331671 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgttttagat 8331745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 10769244 - 10769170
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||| ||||||||    
T  10769244 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtatttcagat 10769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 42191495 - 42191421
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| ||| ||||| | || ||||||||||||    
T  42191495 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagat 42191421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 42197437 - 42197363
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| ||| ||||| | || ||||||||||||    
T  42197437 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagat 42197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 10760925 - 10760851
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||| ||||| ||||| | || ||||||||||||    
T  10760925 agaacttgaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagat 10760851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 26429692 - 26429642
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccg 63  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  26429692 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccg 26429642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 30051377 - 30051303
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||| ||||||||||| || ||||| | || ||||||||||||    
T  30051377 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgtcgctaactctattgtgtgtttcagat 30051303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 13444942 - 13444991
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgcc 62  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  13444942 agaacttgaggcataaaagtatcggttgaggaagaaccaaatcagccgcc 13444991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10760761 - 10760703
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| ||||||||||||||||    
T  10760761 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgctt 10760703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 24643815 - 24643773
Alignment:
Q  26 taaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  24643815 taaaggtaccggttgagaaagaaccaaatcagccgccgctaac 24643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 38449174 - 38449116
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| |||||||| |||||||    
T  38449174 ttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgctt 38449116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 38455661 - 38455603
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| |||||||| |||||||    
T  38455661 ttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgctt 38455603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 49151496 - 49151570
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||| |||| |||||| |||||||||||| ||||| |||||||||| ||| ||||| | || ||||||||||||    
T  49151496 agaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagat 49151570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 49157563 - 49157637
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||| |||| |||||| |||||||||||| ||||| |||||||||| ||| ||||| | || ||||||||||||    
T  49157563 agaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagat 49157637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 55003523 - 55003459
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    |||||| || ||||| || |||||| |||| ||||||||||| |||||||||||||||| |||||    
T  55003523 ttgataaattaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgcttctgcta 55003459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 11846339 - 11846264
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaa-tcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||| | |||||| || ||||||||| |||||||||| |||||||||| ||||| | || ||||||||||||    
T  11846339 agaacttgcggcataaaggttccggttgaggaagaaccaaaatcagccgccgctaactctattgtgtgtttcagat 11846264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 28964915 - 28964974
Alignment:
Q  147 tttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    ||||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  28964915 tttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 28964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 53069316 - 53069258
Alignment:
Q  31 gtaccggttgagaaagaaccaaatcagccgccgttaac--ttttttatgtgtttcagat 87  Q
    |||||||||||| |||||||||||||||||||| ||||  | |||| ||||||||||||    
T  53069316 gtaccggttgaggaagaaccaaatcagccgccgctaaccatattttgtgtgtttcagat 53069258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 8331835 - 8331893
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  8331835 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 8331893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10244445 - 10244387
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  10244445 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 10244387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 11839836 - 11839778
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  11839836 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 11839778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 11846174 - 11846116
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  11846174 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 11846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 17055904 - 17055846
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  17055904 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 17055846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 55003684 - 55003613
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||| |||||   |||||||||||||||||| ||||| | || ||| ||||||||    
T  55003684 agaacttgaggcataaaggtaccgattgag---gaaccaaatcagccgccgctaactctattgtgtatttcagat 55003613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 13149959 - 13149885
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  13149959 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 13149885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 28683220 - 28683146
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||| ||||||| | || ||||||||||||    
T  28683220 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgctgttaactctattgtgtgtttcagat 28683146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 44717080 - 44717006
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  44717080 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 44717006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 13455984 - 13456058
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| ||| ||||| | || ||||||||||||    
T  13455984 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagat 13456058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 13461925 - 13461999
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||| ||| ||||| | || ||||||||||||    
T  13461925 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagat 13461999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 31008239 - 31008313
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  31008239 agaacttgaggcataaaagtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 31008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 36750299 - 36750373
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| ||||||  ||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  36750299 agaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 36750373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 35084954 - 35084899
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||    
T  35084954 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 35084899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 35090927 - 35090872
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||    
T  35090927 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 35090872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 35438980 - 35438925
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||    
T  35438980 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 35438925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 30965212 - 30965286
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  30965212 agaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 30965286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 31002261 - 31002335
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||||||||| || ||||| ||||| | || ||||||||||||    
T  31002261 agaacttgaggcataaaggtaccggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagat 31002335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 23343438 - 23343486
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgc 61  Q
    |||||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  23343438 agaacttgaggcataaaggtatcggttgaggaagaaccaaatcagccgc 23343486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 13149802 - 13149739
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||| |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  13149802 atatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 13149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 35438813 - 35438762
Alignment:
Q  155 atcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||||| || |||||| |||| ||||||||||| ||||||||||||||||    
T  35438813 atcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgctt 35438762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 28683056 - 28682998
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  28683056 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 28682998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 29034705 - 29034751
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagcc 59  Q
    ||||||||||||||||| ||||| |||||| ||||| ||||||||||    
T  29034705 agaacttgagacataaaggtaccagttgaggaagaatcaaatcagcc 29034751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 35090760 - 35090702
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  35090760 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 35090702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 36750463 - 36750521
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  36750463 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 36750521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 25381810 - 25381736
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  25381810 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 25381736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 25387779 - 25387705
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  25387779 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 25387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 34739870 - 34739944
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  34739870 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 34739944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 169
Target Start/End: Complemental strand, 27395880 - 27395785
Alignment:
Q  75 atgtgtttcagattgctgctagagaactctttcatcgtggatccatatattcctaatacctttaatctatat-tttgatagatcaaacaagttgta 169  Q
    |||||||| | |||| ||| |||||| ||||||||| |||||| | ||||||||||||| |||||| ||||| |||||||||||||||| ||||||    
T  27395880 atgtgttttatattgatgccagagaattctttcatcatggatcaagatattcctaatacatttaatatatatctttgatagatcaaacatgttgta 27395785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 1078129 - 1078203
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| |||| ||||| | || ||||||||||||    
T  1078129 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagcggccgctaactctattgtgtgtttcagat 1078203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 31051429 - 31051503
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| ||||||||| || |||||||||||||||||||| ||||| | || ||||||||||||    
T  31051429 agaacttgaggcataaaggtaccggttaaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 31051503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 8093121 - 8093066
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||    
T  8093121 agaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 8093066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 44409885 - 44409940
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac 68  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||    
T  44409885 agaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaac 44409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 50306093 - 50306148
Alignment:
Q  32 taccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    ||||||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  50306093 taccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 50306148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 50306232 - 50306295
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||| |||||| |||||||| || |||||| |||||||||||||||| |||||||| |||||||    
T  50306232 atatcttgataaatcaaacatgtcgtagatccgattataatcatgttcaatgttttgtttgctt 50306295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 31057929 - 31058003
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| ||||||||| || |||||||||||||| ||||| ||||| | || ||||||| ||||    
T  31057929 agaacttgaggcataaaggtaccggttaaggaagaaccaaatcagtcgccgctaactctattgtgtgttttagat 31058003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 8092957 - 8092893
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgcttttgcta 212  Q
    |||||| |||||||| ||  ||||| |||| ||||||||||| |||||||||||||||| |||||    
T  8092957 ttgataaatcaaacatgtcatagatccgatcataatcatgttcaatgttttatttgcttctgcta 8092893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 27955216 - 27955267
Alignment:
Q  155 atcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||| |||||||    
T  27955216 atcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgctt 27955267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 31058087 - 31058150
Alignment:
Q  143 atattttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||| |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  31058087 atatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 31058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 25387615 - 25387557
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  25387615 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 25387557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 34740034 - 34740092
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  34740034 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 34740092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 24927036 - 24926991
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagc 58  Q
    |||||||||| |||| | |||||||||||| |||||||||||||||    
T  24927036 agaacttgaggcatataggtaccggttgaggaagaaccaaatcagc 24926991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 27955044 - 27955120
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaac--ttttttatgtgtttcagat 87  Q
    ||||||| ||||||||| |||||||||||| || ||| ||||||| || |||||||  ||| || ||||||||||||    
T  27955044 agaacttaagacataaaggtaccggttgaggaataactaaatcagtcgtcgttaacattttgttgtgtgtttcagat 27955120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12183864 - 12183820
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcag 57  Q
    |||||||||| |||||| ||| ||||||||||| |||||||||||    
T  12183864 agaacttgaggcataaaggtagcggttgagaaataaccaaatcag 12183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 173165 - 173091
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||| | || ||||||||||||    
T  173165 agaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 173091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 1469 - 1395
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccgttaacttttttatgtgtttcagat 87  Q
    |||||||||| |||||| |||||||||||| || ||||||||||| ||||| ||||| | || ||||||||||||    
T  1469 agaacttgaggcataaatgtaccggttgaggaaaaaccaaatcagtcgccgctaactctattgtgtgtttcagat 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 894 - 844
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgccg 63  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  894 agaacttgaggcataaacgtaccggttgaggaagaaccaaatcagccgccg 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 730 - 672
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  730 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 5583 - 5641
Alignment:
Q  148 ttgatagatcaaacaagttgtagattcgattataatcatgtttaatgttttatttgctt 206  Q
    |||||| |||||||| || |||||| |||| ||||||||||| |||||||| |||||||    
T  5583 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 5641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 968 - 1017
Alignment:
Q  13 agaacttgagacataaaagtaccggttgagaaagaaccaaatcagccgcc 62  Q
    |||||||||| ||||||  || |||||||| |||||||||||||||||||    
T  968 agaacttgaggcataaagataacggttgaggaagaaccaaatcagccgcc 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University