View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_high_8 (Length: 412)
Name: NF2951_high_8
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 13 - 392
Target Start/End: Original strand, 31525171 - 31525550
Alignment:
| Q |
13 |
gaatgtggtggatagggaagatatagcaagtttggtgagaaaagtaattttggtggaccaaaatgggaagagaaaccacgtgagggaaagagtgaaagag |
112 |
Q |
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| T |
31525171 |
gaatgtggtggagagggaagagatagcaagtttggtgagaaaggtaattttggtggaccaaaatgggaagagaaaccacgtgagggaaagagtgaaagag |
31525270 |
T |
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| Q |
113 |
gttagggttagtgcagagaaagctttgttacagggtggttcgtcttataatgcattgtctcatgtggccaaaataataaacaaacaagattttgtttgtg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31525271 |
gttagggttagtgcagagaaagctttgttacagggtggttcgtcttataacgcattgtctcatgtggccaaaataataaacaaacaagattttgtttgtg |
31525370 |
T |
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| Q |
213 |
tttcaaaaaacatggatactgatggggatgatataaaagacagaaaaaatcagtgatgtcataggtctaataataagaaaaaataacaaatataagaacg |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31525371 |
tttcaaaaaacatggatactgatggggatgatataaaagacagaaaaaatcagtgatgtcatgggtctaataataagaaaaaataacaaatataagaacg |
31525470 |
T |
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| Q |
313 |
agtgtaatatgtatgttatgggtccatatatcactccgtatgtgtggtggagaagttagatgtggttaaacacttgaatg |
392 |
Q |
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||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31525471 |
agtgtaataagtatattatgggtccatatatcactccgtatgtgtggtggagaagttagatgtggttaaacacttgaatg |
31525550 |
T |
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