View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_low_15 (Length: 308)
Name: NF2951_low_15
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 134 - 293
Target Start/End: Original strand, 23980964 - 23981123
Alignment:
| Q |
134 |
tgtataaaggcaaagttaagctatactatagctatagataaatggttgatgagtattatgatataccttgtccaccacttcatgcaacaaatagataaca |
233 |
Q |
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| T |
23980964 |
tgtataaaggcaaagttaacctatactatagctatagataaatggttgatgagtattatgatataccttgtccaccacttcatgcaacaaatagataaca |
23981063 |
T |
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| Q |
234 |
catgacaccaattatattacaaaagtaaaatttgttgtcaaattctgatttcaagatatt |
293 |
Q |
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| T |
23981064 |
catgacaccaattatattacaaaagtaaaatttgttgtcaaattctgatttcaagatatt |
23981123 |
T |
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Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23980821 - 23980877
Alignment:
| Q |
1 |
tgactttgttgtatgtactagcttgtacctctaccaggacgtgtccttacatgcttc |
57 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23980821 |
tgactttgttgtatgtactagcttgtacctctaccaggacgtgtccttacatgcttc |
23980877 |
T |
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