View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_low_32 (Length: 237)
Name: NF2951_low_32
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39955496 - 39955275
Alignment:
| Q |
1 |
gaactatatagtattttaaactaattaaaccatatctagagagctacaatactaggcttattccttggaatccccttaagcaatttccctgagaatgtct |
100 |
Q |
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| T |
39955496 |
gaactatatagtattttaaactaattgaaccatatctagagagctacaatactaggcttattccttggaatccccttaagcaatttccctgagaatgttt |
39955397 |
T |
|
| Q |
101 |
caataagtttgttgaactcaaatggggtcttccatttcttggcagattccttagctatgaagcttctcattcttacattttcctgcttcagcatatctat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
39955396 |
caataagtttgttgaactcaaatggggtcttccatttcttggcagattccttagctatgaagcttctcatttttacattttcctgcttcagcatatctat |
39955297 |
T |
|
| Q |
201 |
tgttgaactcagctgtcttatt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
39955296 |
tgttgaactcagctgtcttatt |
39955275 |
T |
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