View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2951_low_6 (Length: 441)
Name: NF2951_low_6
Description: NF2951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2951_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 10 - 425
Target Start/End: Complemental strand, 40748891 - 40748477
Alignment:
| Q |
10 |
aagaatattcatttgtgagcagaagaaattaaaacagctaaatttcaaaggttttcacaaagtacaaggaagagaacaaaggtttattggagtaacaaaa |
109 |
Q |
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| T |
40748891 |
aagaatattcatttgtgagcagaagaaattaaaacagctaaatttcaaaggttttcacaaagtacaaggaagaaaacaaaggtttattggagtaacacaa |
40748792 |
T |
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| Q |
110 |
ctaaagctaagaaatcaacaaaaattcttttggagggtacctaaatgctgtaagagataagtgattattctgttaaaagacaagaaaaagtagccatata |
209 |
Q |
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| T |
40748791 |
ctaaagctaagaaatcaacaaaaattcttttggagggtacctaaatgctgtaagagataagtgattattctgttaaaagacaagaaaaagtagccatata |
40748692 |
T |
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| Q |
210 |
gtttatgaggttgtgcatgagctaattgttatagctggagtggtgatctggtttgctttctattgatttcacttgcatatatgtgaaagataaaaccaaa |
309 |
Q |
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| T |
40748691 |
gtttatgaggttgtgcatgagctaattgttatagctggagtggtgatctggtttgctttctattgatttcacttgc-tatatgtgaaagataaaaccaaa |
40748593 |
T |
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| Q |
310 |
agttcttataataaagtagagaatataatatgtcagcttttaacctcatctctatccttggtcacatgcctggtctctttagtctttactcgatagatat |
409 |
Q |
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| T |
40748592 |
agttcttataataaagtagagaatataatatgtcagcttttaacctcatctctatccttggtcacatgcctggtctctttagtctttactcgatagatat |
40748493 |
T |
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| Q |
410 |
attttcaggagaaaag |
425 |
Q |
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| T |
40748492 |
attttcaggagaaaag |
40748477 |
T |
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