View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2952_high_7 (Length: 238)
Name: NF2952_high_7
Description: NF2952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2952_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39119554 - 39119333
Alignment:
| Q |
1 |
ttgcaatattcaacttcttatatatgaaaacaaaaatagagcatggtctgtactgtacgcataat---tgagatggaatgtgaggctggcacgcatataa |
97 |
Q |
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| T |
39119554 |
ttgcaatattcaactt---atatatgaaaacaaaaatagagcatggtctgtactgtacgcataataattgagatggaatgtgaggctggcacgcatataa |
39119458 |
T |
|
| Q |
98 |
taaaggggtttcctacttcacgtggaaatccatccttttacaaacctctttaattgattaattaatacaaaccgtgcagtgcaggttttaaatgtgagat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39119457 |
taaaggggtttcctacttcacgtggaaatccatccttttacaaacctctttaattgattaattaatacaaaccgtgcagtgcaggttttaaatgtgagat |
39119358 |
T |
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| Q |
198 |
cactattattgctgttggttggtat |
222 |
Q |
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||||||||||||||||||||||||| |
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| T |
39119357 |
cactattattgctgttggttggtat |
39119333 |
T |
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