View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2953_low_2 (Length: 285)

Name: NF2953_low_2
Description: NF2953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2953_low_2
NF2953_low_2
[»] chr5 (34 HSPs)
chr5 (202-279)||(28372134-28372211)
chr5 (202-278)||(37600061-37600137)
chr5 (202-278)||(38146471-38146547)
chr5 (202-278)||(23113455-23113531)
chr5 (202-278)||(33473984-33474060)
chr5 (203-278)||(22335432-22335507)
chr5 (203-278)||(22338962-22339037)
chr5 (202-278)||(19510412-19510488)
chr5 (202-278)||(41878704-41878780)
chr5 (202-278)||(22120644-22120720)
chr5 (204-278)||(22108503-22108577)
chr5 (202-278)||(15238170-15238246)
chr5 (202-278)||(24768615-24768691)
chr5 (204-278)||(20294464-20294538)
chr5 (204-268)||(19474227-19474291)
chr5 (202-278)||(20912305-20912381)
chr5 (202-265)||(18354760-18354823)
chr5 (202-268)||(40727451-40727517)
chr5 (202-278)||(10751767-10751843)
chr5 (204-278)||(11219505-11219579)
chr5 (1-45)||(23113275-23113319)
chr5 (1-45)||(37599881-37599925)
chr5 (1-44)||(9775014-9775057)
chr5 (204-278)||(11224091-11224165)
chr5 (204-278)||(11227913-11227987)
chr5 (1-45)||(22335710-22335754)
chr5 (1-45)||(22339240-22339284)
chr5 (1-45)||(28371888-28371932)
chr5 (1-45)||(41878524-41878568)
chr5 (1-44)||(42959628-42959671)
chr5 (204-278)||(11226107-11226181)
chr5 (204-278)||(11229903-11229977)
chr5 (1-45)||(38146291-38146335)
chr5 (202-273)||(36459503-36459574)
[»] scaffold0544 (3 HSPs)
scaffold0544 (202-278)||(3569-3645)
scaffold0544 (218-278)||(1-61)
scaffold0544 (1-45)||(3389-3433)
[»] scaffold0026 (1 HSPs)
scaffold0026 (202-278)||(109551-109627)
[»] scaffold0012 (2 HSPs)
scaffold0012 (202-278)||(224195-224271)
scaffold0012 (1-38)||(223980-224017)
[»] chr8 (21 HSPs)
chr8 (202-278)||(8415029-8415105)
chr8 (202-278)||(8729662-8729738)
chr8 (202-278)||(11774246-11774322)
chr8 (205-278)||(363218-363291)
chr8 (202-278)||(27942738-27942814)
chr8 (202-278)||(23427776-23427852)
chr8 (202-278)||(21409850-21409926)
chr8 (202-278)||(21804342-21804418)
chr8 (204-278)||(21829515-21829589)
chr8 (204-278)||(21974238-21974312)
chr8 (204-278)||(21978348-21978422)
chr8 (204-278)||(22110551-22110625)
chr8 (204-278)||(43250152-43250226)
chr8 (202-278)||(14399145-14399221)
chr8 (204-263)||(44385888-44385947)
chr8 (204-264)||(18864159-18864219)
chr8 (204-264)||(30941619-30941679)
chr8 (202-238)||(23913255-23913291)
chr8 (202-273)||(42560934-42561005)
chr8 (1-38)||(20459295-20459332)
chr8 (202-267)||(21328527-21328592)
[»] chr7 (58 HSPs)
chr7 (202-278)||(14420737-14420813)
chr7 (202-278)||(15166200-15166276)
chr7 (202-278)||(18871247-18871323)
chr7 (202-278)||(10897949-10898025)
chr7 (202-278)||(41283595-41283671)
chr7 (202-278)||(146450-146526)
chr7 (202-278)||(834098-834174)
chr7 (202-278)||(1199278-1199354)
chr7 (202-278)||(16004954-16005030)
chr7 (202-278)||(18606285-18606364)
chr7 (202-278)||(838186-838262)
chr7 (202-278)||(1203366-1203442)
chr7 (202-278)||(11660232-11660308)
chr7 (202-278)||(13891580-13891656)
chr7 (202-278)||(16110028-16110104)
chr7 (202-278)||(10607373-10607449)
chr7 (202-278)||(16582371-16582447)
chr7 (202-268)||(11302267-11302333)
chr7 (202-278)||(7520268-7520345)
chr7 (202-278)||(13891963-13892039)
chr7 (202-278)||(39721145-39721221)
chr7 (204-278)||(15083175-15083249)
chr7 (202-278)||(9752560-9752636)
chr7 (202-278)||(9752644-9752720)
chr7 (202-278)||(39268366-39268442)
chr7 (204-278)||(31675-31749)
chr7 (204-278)||(72426-72500)
chr7 (204-278)||(76535-76609)
chr7 (204-278)||(12706177-12706251)
chr7 (204-278)||(12713490-12713564)
chr7 (204-278)||(12717237-12717311)
chr7 (204-278)||(12722148-12722222)
chr7 (204-278)||(16908564-16908638)
chr7 (204-278)||(18277944-18278018)
chr7 (204-278)||(18281908-18281982)
chr7 (202-278)||(2531384-2531460)
chr7 (202-278)||(18424185-18424261)
chr7 (202-268)||(26291116-26291182)
chr7 (202-278)||(2833534-2833610)
chr7 (204-264)||(45171555-45171615)
chr7 (1-45)||(146662-146706)
chr7 (1-45)||(10897769-10897813)
chr7 (1-45)||(18871459-18871503)
chr7 (1-44)||(23666414-23666457)
chr7 (1-45)||(29795325-29795369)
chr7 (1-45)||(29799144-29799188)
chr7 (202-273)||(15213003-15213074)
chr7 (202-247)||(1860074-1860119)
chr7 (1-38)||(11660486-11660523)
chr7 (202-238)||(13919465-13919501)
chr7 (202-238)||(25928424-25928460)
chr7 (2-37)||(18606508-18606543)
chr7 (202-237)||(20486733-20486768)
chr7 (1-38)||(6373456-6373493)
chr7 (1-38)||(13254928-13254965)
chr7 (1-38)||(14565257-14565294)
chr7 (202-238)||(9752728-9752764)
chr7 (202-238)||(39268450-39268486)
[»] chr6 (37 HSPs)
chr6 (202-278)||(4475745-4475821)
chr6 (202-278)||(12941171-12941247)
chr6 (202-278)||(23955319-23955395)
chr6 (202-278)||(27222782-27222858)
chr6 (202-278)||(28290947-28291023)
chr6 (202-278)||(22075443-22075519)
chr6 (203-278)||(14470831-14470906)
chr6 (204-278)||(23988253-23988327)
chr6 (202-278)||(27416580-27416656)
chr6 (202-278)||(31479515-31479591)
chr6 (204-278)||(8242362-8242436)
chr6 (204-278)||(11565351-11565425)
chr6 (204-278)||(11716995-11717069)
chr6 (204-278)||(12620388-12620462)
chr6 (202-278)||(23400627-23400703)
chr6 (202-278)||(23537931-23538007)
chr6 (210-278)||(27555490-27555558)
chr6 (204-278)||(16758665-16758739)
chr6 (204-278)||(22861705-22861779)
chr6 (204-278)||(22947617-22947691)
chr6 (204-278)||(22951573-22951647)
chr6 (204-278)||(23870061-23870135)
chr6 (204-278)||(23874017-23874091)
chr6 (204-264)||(23393605-23393665)
chr6 (204-264)||(23413513-23413573)
chr6 (1-45)||(4475958-4476002)
chr6 (2-45)||(12941383-12941426)
chr6 (204-255)||(19869160-19869211)
chr6 (202-273)||(34297825-34297896)
chr6 (202-238)||(23537887-23537923)
chr6 (202-278)||(25737842-25737918)
chr6 (202-273)||(1254114-1254185)
chr6 (202-268)||(16622797-16622861)
chr6 (1-38)||(23351639-23351676)
chr6 (1-38)||(25621448-25621485)
chr6 (1-41)||(221306-221346)
chr6 (202-238)||(2076276-2076312)
[»] chr4 (41 HSPs)
chr4 (202-278)||(15533169-15533245)
chr4 (202-278)||(18211554-18211630)
chr4 (202-278)||(24048437-24048513)
chr4 (202-278)||(28384801-28384877)
chr4 (202-278)||(36036902-36036978)
chr4 (202-278)||(30145733-30145809)
chr4 (202-278)||(24048521-24048597)
chr4 (211-278)||(49549145-49549212)
chr4 (202-278)||(17052498-17052574)
chr4 (202-278)||(20158500-20158576)
chr4 (202-278)||(20163951-20164027)
chr4 (202-278)||(22634979-22635055)
chr4 (202-278)||(13818457-13818533)
chr4 (202-278)||(20161176-20161252)
chr4 (204-278)||(4562828-4562902)
chr4 (204-278)||(5758510-5758584)
chr4 (204-278)||(9555019-9555093)
chr4 (204-278)||(14759046-14759120)
chr4 (204-278)||(14955814-14955888)
chr4 (204-278)||(33740786-33740860)
chr4 (202-263)||(12422908-12422969)
chr4 (202-278)||(13813885-13813961)
chr4 (202-278)||(13818373-13818449)
chr4 (202-278)||(15223496-15223572)
chr4 (202-278)||(23997018-23997094)
chr4 (204-278)||(12486221-12486295)
chr4 (204-278)||(25688392-25688466)
chr4 (204-265)||(17807017-17807078)
chr4 (202-278)||(38106897-38106972)
chr4 (1-45)||(15533381-15533425)
chr4 (1-45)||(36037114-36037158)
chr4 (1-45)||(18211787-18211831)
chr4 (1-45)||(49548955-49548999)
chr4 (202-264)||(40906323-40906385)
chr4 (1-38)||(24048222-24048259)
chr4 (202-238)||(22635063-22635099)
chr4 (9-44)||(30145947-30145982)
chr4 (202-264)||(38106798-38106860)
chr4 (202-247)||(13813969-13814014)
chr4 (202-247)||(13818541-13818586)
chr4 (6-38)||(17142491-17142523)
[»] chr3 (62 HSPs)
chr3 (202-278)||(14764848-14764924)
chr3 (202-278)||(23372596-23372672)
chr3 (202-278)||(51299483-51299559)
chr3 (202-278)||(41084-41160)
chr3 (202-278)||(3801920-3801996)
chr3 (202-278)||(9532208-9532284)
chr3 (202-278)||(54519547-54519623)
chr3 (202-278)||(10834994-10835070)
chr3 (202-278)||(13435768-13435844)
chr3 (202-278)||(29545991-29546067)
chr3 (202-278)||(18899400-18899479)
chr3 (202-278)||(20249902-20249978)
chr3 (202-278)||(12853416-12853492)
chr3 (202-278)||(8928920-8928996)
chr3 (202-278)||(11301718-11301794)
chr3 (202-278)||(16795453-16795529)
chr3 (202-278)||(5219797-5219873)
chr3 (202-265)||(16326094-16326158)
chr3 (202-278)||(19774148-19774224)
chr3 (204-278)||(7108188-7108262)
chr3 (204-278)||(7112123-7112197)
chr3 (204-278)||(11068563-11068637)
chr3 (204-278)||(11167148-11167222)
chr3 (204-278)||(15616127-15616201)
chr3 (204-278)||(22320079-22320153)
chr3 (204-278)||(22335134-22335208)
chr3 (204-278)||(28948411-28948485)
chr3 (204-278)||(55021326-55021400)
chr3 (202-278)||(30064334-30064410)
chr3 (204-278)||(4108844-4108918)
chr3 (204-278)||(4112693-4112767)
chr3 (202-268)||(11853666-11853732)
chr3 (210-278)||(12337206-12337275)
chr3 (202-278)||(38312910-38312985)
chr3 (202-265)||(12304136-12304200)
chr3 (202-278)||(14664375-14664451)
chr3 (202-278)||(14667539-14667615)
chr3 (204-278)||(14497898-14497971)
chr3 (202-268)||(18933409-18933475)
chr3 (207-264)||(15963461-15963518)
chr3 (207-264)||(15967385-15967442)
chr3 (207-264)||(15971309-15971366)
chr3 (1-45)||(9532420-9532464)
chr3 (1-45)||(12304336-12304380)
chr3 (1-45)||(14764668-14764712)
chr3 (202-278)||(15564801-15564877)
chr3 (202-278)||(16751954-16752030)
chr3 (1-45)||(23372416-23372460)
chr3 (1-45)||(29545790-29545834)
chr3 (1-45)||(51299695-51299739)
chr3 (202-264)||(15555602-15555664)
chr3 (228-278)||(17348806-17348856)
chr3 (1-45)||(3802132-3802176)
chr3 (202-273)||(11912382-11912453)
chr3 (1-38)||(10834813-10834850)
chr3 (202-238)||(15463868-15463904)
chr3 (1-45)||(54519759-54519803)
chr3 (202-237)||(14670017-14670052)
chr3 (202-237)||(14681541-14681576)
chr3 (1-38)||(16613693-16613730)
chr3 (1-38)||(18899636-18899673)
chr3 (1-38)||(22045523-22045560)
[»] chr2 (27 HSPs)
chr2 (202-278)||(10686299-10686375)
chr2 (202-278)||(19663610-19663686)
chr2 (202-278)||(20260207-20260283)
chr2 (202-278)||(9240624-9240700)
chr2 (202-278)||(37378986-37379062)
chr2 (202-278)||(6481734-6481810)
chr2 (202-278)||(6485201-6485277)
chr2 (202-278)||(21074560-21074636)
chr2 (204-278)||(10103351-10103425)
chr2 (204-278)||(12902661-12902735)
chr2 (204-278)||(24630102-24630176)
chr2 (204-278)||(24645101-24645175)
chr2 (204-278)||(24647044-24647118)
chr2 (204-278)||(24647877-24647951)
chr2 (204-278)||(30346712-30346786)
chr2 (204-268)||(27381048-27381112)
chr2 (204-268)||(27385018-27385082)
chr2 (202-278)||(31343867-31343943)
chr2 (204-278)||(27600321-27600395)
chr2 (204-264)||(41532497-41532557)
chr2 (1-45)||(20260419-20260463)
chr2 (1-45)||(6262086-6262130)
chr2 (1-45)||(10686162-10686206)
chr2 (1-45)||(19663364-19663408)
chr2 (1-38)||(9240836-9240873)
chr2 (202-238)||(9783984-9784020)
chr2 (1-44)||(21074380-21074423)
[»] chr1 (18 HSPs)
chr1 (202-278)||(32649017-32649093)
chr1 (202-278)||(16370875-16370951)
chr1 (202-278)||(20439205-20439281)
chr1 (202-278)||(29533837-29533913)
chr1 (202-278)||(22132151-22132227)
chr1 (202-278)||(33795983-33796059)
chr1 (204-278)||(1009212-1009286)
chr1 (204-278)||(1926850-1926924)
chr1 (204-278)||(16376870-16376944)
chr1 (202-268)||(20230192-20230258)
chr1 (204-278)||(20925864-20925938)
chr1 (202-278)||(41389717-41389793)
chr1 (204-278)||(52634218-52634292)
chr1 (202-278)||(39245223-39245297)
chr1 (202-278)||(39248778-39248852)
chr1 (202-238)||(41801331-41801367)
chr1 (1-38)||(13883094-13883131)
chr1 (2-38)||(28311769-28311805)
[»] scaffold1427 (1 HSPs)
scaffold1427 (202-278)||(150-226)
[»] scaffold0337 (1 HSPs)
scaffold0337 (202-273)||(10874-10945)
[»] scaffold0124 (2 HSPs)
scaffold0124 (202-278)||(37585-37661)
scaffold0124 (202-278)||(25620-25696)
[»] scaffold0080 (2 HSPs)
scaffold0080 (202-278)||(33887-33963)
scaffold0080 (202-232)||(28468-28498)
[»] scaffold0842 (1 HSPs)
scaffold0842 (202-278)||(5192-5268)
[»] scaffold0142 (1 HSPs)
scaffold0142 (202-278)||(8792-8868)
[»] scaffold1852 (1 HSPs)
scaffold1852 (202-278)||(873-949)
[»] scaffold0410 (1 HSPs)
scaffold0410 (202-268)||(14804-14870)
[»] scaffold0525 (1 HSPs)
scaffold0525 (202-278)||(5583-5659)
[»] scaffold0166 (1 HSPs)
scaffold0166 (202-278)||(11112-11188)
[»] scaffold0003 (1 HSPs)
scaffold0003 (202-278)||(70705-70781)
[»] scaffold0349 (1 HSPs)
scaffold0349 (204-278)||(11001-11075)
[»] scaffold0061 (1 HSPs)
scaffold0061 (204-278)||(68610-68684)
[»] scaffold0028 (1 HSPs)
scaffold0028 (204-278)||(60380-60454)
[»] scaffold0327 (1 HSPs)
scaffold0327 (202-278)||(18773-18849)
[»] scaffold0023 (1 HSPs)
scaffold0023 (202-278)||(11727-11803)
[»] scaffold0157 (1 HSPs)
scaffold0157 (204-278)||(34182-34256)
[»] scaffold0141 (1 HSPs)
scaffold0141 (204-264)||(15629-15689)
[»] scaffold0002 (1 HSPs)
scaffold0002 (210-278)||(115405-115473)
[»] scaffold0299 (1 HSPs)
scaffold0299 (210-278)||(5775-5844)
[»] scaffold1873 (2 HSPs)
scaffold1873 (219-278)||(641-700)
scaffold1873 (202-230)||(605-633)
[»] scaffold0486 (1 HSPs)
scaffold0486 (202-265)||(8540-8603)
[»] scaffold0372 (1 HSPs)
scaffold0372 (204-278)||(6375-6448)
[»] scaffold0599 (1 HSPs)
scaffold0599 (202-273)||(4076-4147)
[»] scaffold0575 (1 HSPs)
scaffold0575 (202-238)||(7013-7049)
[»] scaffold0013 (1 HSPs)
scaffold0013 (202-238)||(74384-74420)
[»] scaffold0293 (1 HSPs)
scaffold0293 (208-238)||(21390-21420)
[»] scaffold2170 (1 HSPs)
scaffold2170 (1-38)||(965-1002)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-38)||(4708-4745)
[»] scaffold0335 (2 HSPs)
scaffold0335 (1-38)||(20-57)
scaffold0335 (1-38)||(9099-9136)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-38)||(20849-20886)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-38)||(1476-1513)


Alignment Details
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 28372134 - 28372211
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgtc 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28372134 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgtc 28372211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 37600061 - 37600137
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37600061 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 37600137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 38146471 - 38146547
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146471 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 38146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 23113455 - 23113531
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23113455 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 23113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 33473984 - 33474060
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33473984 agttgataagttgtcttttattcatgaattgttaatggaatgtttgatgaataattattattatgaaatgatgatgt 33474060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 22335507 - 22335432
Alignment:
Q  203 gttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22335507 gttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaataatgatgt 22335432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 22339037 - 22338962
Alignment:
Q  203 gttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22339037 gttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaataatgatgt 22338962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 19510488 - 19510412
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19510488 agttgataggttgtcttttattcatgaattgctaatggaacgtttgatgaataattattattatgaaatgatgatgt 19510412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 41878704 - 41878780
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41878704 agttgataagttgtcttttatttatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 41878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 22120644 - 22120720
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  22120644 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaaatgatgatgt 22120720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 22108503 - 22108577
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  22108503 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattgatgatgt 22108577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 15238170 - 15238246
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||| | |||||||    
T  15238170 agttgataagttgtcttttattcatgaaatgataatgagatgtttgatgaataattattattatgaattaatgatgt 15238246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 24768615 - 24768691
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||||| | |||||||    
T  24768615 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattaatattatgaattaatgatgt 24768691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 20294538 - 20294464
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  20294538 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 20294464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 19474227 - 19474291
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  19474227 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaa 19474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20912305 - 20912381
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||| ||||||| | |||||||    
T  20912305 agttgataagttgtcttttattcatgaaatgataatgagatgtttgatgaataattattgttatgaattaatgatgt 20912381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 18354823 - 18354760
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattat 265  Q
    ||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  18354823 agttgataaattgtcttttattcatgaattgataatgagatgtttgatgaataattattattat 18354760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 40727451 - 40727517
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||| |||||||||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  40727451 agttgataagttatcttttattcatgaattgataaagagatgtttgatgaataattattattatgaa 40727517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 10751843 - 10751767
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||| ||| || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  10751843 agttgataagttgtcttttattcaagaaatgataatgagatggttgatgaataattattattatgaattaatgatgt 10751767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11219579 - 11219505
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| || ||||| ||| | |||||||    
T  11219579 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtactattacgaattaatgatgt 11219505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23113275 - 23113319
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  23113275 gtgtcgtttatattattatgagaagatgtttatgatattgattac 23113319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37599881 - 37599925
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  37599881 gtgtcgtttatattattatgagaagatgtttatgatattgattac 37599925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9775057 - 9775014
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgatta 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  9775057 gtgtcgtttatattattatgagaagatgtttatgatattgatta 9775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11224165 - 11224091
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||| |||||  ||||||||||||||| || ||||| ||| | |||||||    
T  11224165 ttgataagctgtcttttattcatgaattgataatgagatgtttgatgaataagtactattacgaattaatgatgt 11224091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11227987 - 11227913
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||| |||||  ||||||||||||||| || ||||| ||| | |||||||    
T  11227987 ttgataagctgtcttttattcatgaattgataatgagatgtttgatgaataagtactattacgaattaatgatgt 11227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22335754 - 22335710
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  22335754 gtgtcgtttataatattatgagaagatgtttatgatattgattac 22335710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22339284 - 22339240
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  22339284 gtgtcgtttataatattatgagaagatgtttatgatattgattac 22339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28371888 - 28371932
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  28371888 gtgtcgtttataatattatgagaagatgtttatgatattgattac 28371932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41878524 - 41878568
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||    
T  41878524 gtgtcgtttatattattatgagaagatgtttatgataatgattac 41878568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42959671 - 42959628
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgatta 44  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  42959671 gtgtcgtttatattattatgagaagatgtttatgatatttatta 42959628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11226181 - 11226107
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||| | |||  ||||||||||||||| || ||||| ||| | |||||||    
T  11226181 ttgataagctgtcttttattcatgaattgatcatgagatgtttgatgaataagtactattacgaattaatgatgt 11226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11229977 - 11229903
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||| | |||  ||||||||||||||| || ||||| ||| | |||||||    
T  11229977 ttgataagctgtcttttattcatgaattgatcatgagatgtttgatgaataagtactattacgaattaatgatgt 11229903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38146291 - 38146335
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  38146291 gtgtcgtttatattattatgtgaagatttttatgatattgattac 38146335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 36459574 - 36459503
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   |||||||||  |||||||||  ||| |||||||||||||||| ||||||| ||||    
T  36459574 agttgataagttgttccttattcatgttttgctaatgagatggttgatgaataattattgttatgaattgat 36459503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 77; Significance: 9e-36; HSPs: 3)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 3569 - 3645
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3569 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 1 - 61
Alignment:
Q  218 tttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1 tttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 61  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3389 - 3433
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  3389 gtgtcgtttatattattatgagaaaatgtttatgatattgattac 3433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 109627 - 109551
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109627 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 109551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 224195 - 224271
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  224195 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 223980 - 224017
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  223980 gtgtcgtttatatttttatgagaagatgtttatgatat 224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 8415029 - 8415105
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8415029 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 8415105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 8729662 - 8729738
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729662 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 8729738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 11774322 - 11774246
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11774322 agttgataagttgtcttttattcatgaattgttaatggaatgtttgatgaataattattattatgaaatgatgatgt 11774246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 363291 - 363218
Alignment:
Q  205 tgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  363291 tgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 363218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 27942738 - 27942814
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  27942738 agttaataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 27942814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 23427852 - 23427776
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||||||||    
T  23427852 agttgataagttgtcttttattcatgaattgataatgaaatgtttgatgaataattattattataaattgatgatgt 23427776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 21409926 - 21409850
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  21409926 agttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 21409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 21804418 - 21804342
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  21804418 agttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 21804342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 21829515 - 21829589
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  21829515 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 21829589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 21974238 - 21974312
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  21974238 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 21974312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 21978348 - 21978422
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  21978348 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 21978422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22110625 - 22110551
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  22110625 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 22110551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 43250226 - 43250152
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  43250226 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 43250152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 14399145 - 14399221
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||| ||| | |||||||    
T  14399145 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattacgaattaatgatgt 14399221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 44385888 - 44385947
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatt 263  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  44385888 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattatt 44385947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 18864159 - 18864219
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  18864159 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 18864219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 30941619 - 30941679
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||| ||||| |||||  ||||||||||||||| ||||||||    
T  30941619 ttgataagttgtcttttattcataaattgataatgagatgtttgatgaataagtattatta 30941679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 23913291 - 23913255
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23913291 agttgataagttgtcttttattcatgaattgataatg 23913255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 42560934 - 42561005
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    |||||| |||||||   ||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  42560934 agttgacaagttgttccttattcatgcattgctaatgagatggttgatgaataattattgttatgaattgat 42561005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20459332 - 20459295
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  20459332 gtgttgtttatattattatgagaagatgtttatgatat 20459295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 21328592 - 21328527
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatga 267  Q
    ||||||||||||||   ||||||||| ||||||||||  ||| ||| |||||||||||| ||||||    
T  21328592 agttgataagttgttccttattcatgtattgctaatgagatgcttgttgaataattattgttatga 21328527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 14420813 - 14420737
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14420813 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 14420737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 15166276 - 15166200
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15166276 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 15166200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18871323 - 18871247
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871323 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 18871247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 10897949 - 10898025
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10897949 agttgataagttgtcttttattcatgaattgctaatggaatgttttatgaataattattattatgaaatgatgatgt 10898025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 41283671 - 41283595
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41283671 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaaaaattattattatgaaatgatgatgt 41283595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 146526 - 146450
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146526 agttgataagttgtcttctactcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 146450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 834098 - 834174
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  834098 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 834174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 1199278 - 1199354
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1199278 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 1199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 16005030 - 16004954
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16005030 agttgataagttgtcttttattcatgaattgctaatggaatgttcgatgaataactattattatgaaatgatgatgt 16004954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18606364 - 18606285
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattatta---ttatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  18606364 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattattatgaaatgatgatgt 18606285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 838186 - 838262
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  838186 agttgataagttgtcttttattcatgaattgctaataaaatgtttgatgaataattattattatgaattgatgatgt 838262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 1203366 - 1203442
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  1203366 agttgataagttgtcttttattcatgaattgctaataaaatgtttgatgaataattattattatgaattgatgatgt 1203442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 11660308 - 11660232
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  11660308 agttggtaagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaaattatgatgt 11660232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 13891656 - 13891580
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  13891656 agttgataagttgtcttttattcatgaattgctaatgagatgtttgatgaataattattattatgaattgatgatgt 13891580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 16110028 - 16110104
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  16110028 agttgataagttatcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 16110104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 10607373 - 10607449
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  10607373 agttgataagttgtcttttagtcatgaattgataatgagatgtttgatgaataattattattatgaaatgatgatgt 10607449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 16582447 - 16582371
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  16582447 agttgataagttgtctttttttcatgaattgataatgagatgtttgatgaataattattattatgaaatgatgatgt 16582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 11302333 - 11302267
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  11302333 agttgataagttgtcttttattcatgtaatgctaatggaatgtttgatgaataattattattatgaa 11302267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 7520268 - 7520345
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaat-aattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||||||||||||||    
T  7520268 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataaattattattatgaaatgatgatgt 7520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 13892039 - 13891963
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  13892039 agttgataagttgtcttttttgcatgaattgctaatgagatgtttgatgaataattattattatgaattgatgatgt 13891963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 39721221 - 39721145
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  39721221 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 39721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 15083249 - 15083175
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  15083249 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 15083175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 9752560 - 9752636
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||| ||||||||||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  9752560 agttgataagttgccttttattcatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 9752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 9752644 - 9752720
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||| ||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  9752644 agttgataagttgtcttttatccatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 9752720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 39268366 - 39268442
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||| ||||||||||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  39268366 agttgataagttgccttttattcatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 39268442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 31749 - 31675
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  31749 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 31675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 72426 - 72500
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  72426 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 72500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 76535 - 76609
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  76535 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 76609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 12706177 - 12706251
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12706177 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 12713564 - 12713490
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12713564 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12713490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 12717311 - 12717237
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12717311 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12717237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 12722222 - 12722148
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12722222 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12722148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 16908564 - 16908638
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  16908564 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 16908638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 18278018 - 18277944
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  18278018 ttgataagttgtcttttattgatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 18277944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 18281982 - 18281908
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  18281982 ttgataagttgtcttttattgatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 18281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 2531384 - 2531460
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||| ||||||||||||||||||||| | |||||||    
T  2531384 agttgataagttgtcttttattcatgaattgataaagagatgttttatgaataattattattatgaattaatgatgt 2531460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18424261 - 18424185
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  18424261 agttgataagttgtcttttattcatgaaatgataatgagatggttgatgaataattattattatgaattaatgatgt 18424185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 26291182 - 26291116
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    ||||||||||||||||||||||||||||||  |||||  |||||||| |||||||||||||||||||    
T  26291182 agttgataagttgtcttttattcatgaattaataatgagatgtttgacgaataattattattatgaa 26291116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 2833534 - 2833610
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  |||||  ||||||||||||||||||||| | |||||||    
T  2833534 agttgataagttgtcttttattcatgaaatgataatgagatgttcaatgaataattattattatgaattaatgatgt 2833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 45171555 - 45171615
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  45171555 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 45171615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 146706 - 146662
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  146706 gtgtcgtttatattattatgagaagatgtttatgatattgattac 146662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10897769 - 10897813
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10897769 gtgtcgtttatattattatgagaagatgtttatgatattgattac 10897813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18871503 - 18871459
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  18871503 gtgtcgtttatattattatgagaagatgtttatgatattgattac 18871459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23666414 - 23666457
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgatta 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  23666414 gtgtcgtttatattattatgagaagatgtttatgatattgatta 23666457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29795369 - 29795325
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  29795369 gtgtcgtttatattattatgagaagatgtttataatattgattac 29795325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29799188 - 29799144
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  29799188 gtgtcgtttatattattatgagaagatgtttataatattgattac 29799144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 15213074 - 15213003
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   ||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  15213074 agttgataagttgttccttattcatgtattgctaatgagatggttgatgaataattattgttatgaattgat 15213003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 1860074 - 1860119
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttg 247  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||    
T  1860074 agttgataagttgtcttttattcatgaattgataatgagatgtttg 1860119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11660523 - 11660486
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  11660523 gtgtcgtttatattattatgagaagatgtttatgatat 11660486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 13919465 - 13919501
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13919465 agttgataagttgtcttttattcatgaattgataatg 13919501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 25928424 - 25928460
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    |||||||||||||| ||||||||||||||||||||||    
T  25928424 agttgataagttgttttttattcatgaattgctaatg 25928460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 18606543 - 18606508
Alignment:
Q  2 tgtcgtttatattattatgaaaagatgtttatgata 37  Q
    |||||||||||||||||||| |||||||||||||||    
T  18606543 tgtcgtttatattattatgagaagatgtttatgata 18606508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 20486768 - 20486733
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaat 237  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20486768 agttgataagttgtcttttattcatgaattgataat 20486733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6373456 - 6373493
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  6373456 gtgttgtttatattattatgagaagatgtttatgatat 6373493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13254965 - 13254928
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  13254965 gtgttgtttatattattatgagaagatgtttatgatat 13254928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14565294 - 14565257
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  14565294 gtgtcatttatattattatgagaagatgtttatgatat 14565257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 9752728 - 9752764
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    |||||||||||| |||||||||||||||||| |||||    
T  9752728 agttgataagttatcttttattcatgaattgataatg 9752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 39268450 - 39268486
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  39268450 agttgataagttgtcttctattcatgagttgctaatg 39268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 4475821 - 4475745
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4475821 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 4475745  T

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Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 12941247 - 12941171
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12941247 agttgataagttgtcttttattcatgaattgctgatggaatgtttgatgaataattattattatgaaatgatgatgt 12941171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 23955395 - 23955319
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23955395 agttgataagttgtcttttattcatgaattgttaatggaatgtttgatgaataattattattatgaaatgatgatgt 23955319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 27222858 - 27222782
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  27222858 agttgataagttgtcttttattcatgaattgctaatggaatgttcgatgaataactattattatgaaatgatgatgt 27222782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 28290947 - 28291023
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28290947 agttgataagttgtcttttattcataaattgctaattgaatgtttgatgaataattattattatgaaatgatgatgt 28291023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 22075443 - 22075519
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  22075443 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 22075519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 14470906 - 14470831
Alignment:
Q  203 gttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  14470906 gttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 14470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 23988327 - 23988253
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| | |||||||    
T  23988327 ttgataagttgtcttttattaatgaattgataatgaaatgtttgatgaataattattattatgaattaatgatgt 23988253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 27416580 - 27416656
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  27416580 agttgataggttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 27416656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 31479515 - 31479591
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||| | |||||||    
T  31479515 agttgataagttgtcttttattcatgaaatgataatgagatgtttgatgaataattattattatgaattaatgatgt 31479591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 8242436 - 8242362
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  8242436 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 8242362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11565425 - 11565351
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  11565425 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 11565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 11716995 - 11717069
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  11716995 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 11717069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 12620388 - 12620462
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12620388 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12620462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 23400703 - 23400627
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||| || | |||||||    
T  23400703 agttgataagttgtcctttattcatgaattgataatgagatgtttgatgaataattattattataaagtaatgatgt 23400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 23538007 - 23537931
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||  |||||| ||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  23538007 agttgataagttgtcccttattcgtgaattgttaatgagatgtttgatgaataattattattatgaattgatgatgt 23537931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 27555558 - 27555490
Alignment:
Q  210 agttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  27555558 agttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 27555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 16758739 - 16758665
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| || ||  |||||||||||||||||||||||||||| | |||||||    
T  16758739 ttgataagttgtcttttattaatgaattgatagtgagatgtttgatgaataattattattatgaattaatgatgt 16758665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22861779 - 22861705
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||| |||||||| | |||||||    
T  22861779 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattatgattatgaattaatgatgt 22861705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22947691 - 22947617
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  22947691 ttgataagttgtcttttattagtgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 22947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22951647 - 22951573
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  22951647 ttgataagttgtcttttattagtgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 22951573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 23870135 - 23870061
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  23870135 ttgataagttgtcttttattagtgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 23870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 23874091 - 23874017
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  23874091 ttgataagttgtcttttattagtgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 23874017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 23393665 - 23393605
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  23393665 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 23393605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 23413573 - 23413513
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  23413573 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 23413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4476002 - 4475958
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  4476002 gtgtcgtttatattattatgagaagatgtttatgatattgattac 4475958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 12941426 - 12941383
Alignment:
Q  2 tgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12941426 tgtcgtttatattattatgagaagatgtttatgatattgattac 12941383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 19869211 - 19869160
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataa 255  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  19869211 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataa 19869160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 34297825 - 34297896
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   ||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  34297825 agttgataagttgttccttattcatgtattgctaatgagatggttgatgaataattattgttatgaattgat 34297896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 23537923 - 23537887
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23537923 agttgctaagttgtcttttattcatgaattgctaatg 23537887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 25737918 - 25737842
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||  ||||||||| ||||||||||  ||| ||| |||||||||| | ||||||| |||| ||||    
T  25737918 agttgataagttgtcccttattcatgtattgctaatgagatgcttgctgaataattactgttatgaattgataatgt 25737842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 1254185 - 1254114
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   ||||||||| |||| |||||  ||| |||||||||||||||| ||||||| ||||    
T  1254185 agttgataagttgttccttattcatgtattgttaatgagatggttgatgaataattattgttatgaattgat 1254114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 16622861 - 16622797
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    ||||||||||||  |||||||||||||| || |||||  ||||||||||||| ||||| ||||||||    
T  16622861 agttgataagtt--cttttattcatgaaatgataatgagatgtttgatgaatgattatcattatgaa 16622797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23351676 - 23351639
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  23351676 gtgtcgtttatattattataagaagatgtttatgatat 23351639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25621448 - 25621485
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  25621448 gtgttgtttatattattatgagaagatgtttatgatat 25621485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 221346 - 221306
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattga 41  Q
    ||||||||||||||||||||| |||||||||| ||| ||||    
T  221346 gtgtcgtttatattattatgagaagatgtttaagatgttga 221306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 2076312 - 2076276
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    |||||||||||||| |||||||||||||||| |||||    
T  2076312 agttgataagttgttttttattcatgaattgataatg 2076276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 15533245 - 15533169
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533245 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 15533169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18211630 - 18211554
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211630 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 18211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 24048437 - 24048513
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24048437 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaaatgatgatgt 24048513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 28384877 - 28384801
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28384877 agttgataagttgtcttttattcatgaattgctaatggaatgtttgaggaataattattattatgaaatgatgatgt 28384801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 36036978 - 36036902
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36036978 agttgataagttgtcttttattcatgaattgctaatggaatgtttcatgaataattattattatgaaatgatgatgt 36036902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 30145809 - 30145733
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  30145809 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 30145733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 24048521 - 24048597
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  24048521 agttgctaagttgtcttttattcatgaattgttaatgaaatgtttgatgaataattattattatgaaatgatgatgt 24048597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 49549145 - 49549212
Alignment:
Q  211 gttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49549145 gttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 49549212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 17052498 - 17052574
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  17052498 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattgatgatgt 17052574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20158500 - 20158576
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  20158500 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 20158576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20163951 - 20164027
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  20163951 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 20164027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 22634979 - 22635055
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  22634979 agttgataagttgtcttttattcatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 22635055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 13818457 - 13818533
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||| ||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  13818457 agttgataagttgtcttttatccatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 13818533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20161176 - 20161252
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  20161176 agttgataagttgtcttttattcaagaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 20161252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 4562828 - 4562902
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  4562828 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 4562902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 5758510 - 5758584
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  5758510 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 5758584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 9555093 - 9555019
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  9555093 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 9555019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 14759046 - 14759120
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  14759046 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 14759120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 14955814 - 14955888
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  14955814 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 14955888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 33740860 - 33740786
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  33740860 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 33740786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 12422969 - 12422908
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatt 263  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  12422969 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattatt 12422908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 13813885 - 13813961
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||| ||||| ||||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  13813885 agttgataagttgccttttgttcatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 13813961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 13818373 - 13818449
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||  |||||||||||||||  |||||  |||||||||||||||||||||||||||| |||||||||    
T  13818373 agttgataagttgcattttattcatgaatttataatgagatgtttgatgaataattattattatgaattgatgatgt 13818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 15223572 - 15223496
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  15223572 agttgataagttgtcttttattcatgaaatgataatgagatggttgatgaataattattattatgaattaatgatgt 15223496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 23997018 - 23997094
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||| |||||||||||||||||| |||||  |||||||||||||||| ||||||||||| | |||||||    
T  23997018 agttgataagttctcttttattcatgaattgataatgagatgtttgatgaataatcattattatgaattaatgatgt 23997094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 12486295 - 12486221
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| | |||  |||||||||||||||||||||||||||| | |||||||    
T  12486295 ttgataagttgtcttttattaatgaattgatgatgagatgtttgatgaataattattattatgaattaatgatgt 12486221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 25688466 - 25688392
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  25688466 ttgataagttgtcttttattagtgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 25688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 17807078 - 17807017
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattat 265  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  17807078 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattat 17807017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 38106972 - 38106897
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||| |||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||| | |||||||    
T  38106972 agttgataaattgtctttcattcatgagttgctaatg-aatgtttgatgaagaattattattatgaattaatgatgt 38106897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15533425 - 15533381
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  15533425 gtgtcgtttatattattatgagaagatgtttatgatattgattac 15533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36037158 - 36037114
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  36037158 gtgtcgtttatattattatgagaagatgtttatgatattgattac 36037114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18211831 - 18211787
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  18211831 gtgtcgtctatattattatgagaagatgtttatgatattgattac 18211787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49548955 - 49548999
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||    
T  49548955 gtgtcgtttatattattatgagaagatgtttatgataatgattac 49548999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 40906385 - 40906323
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||| ||||||||||| ||||||| | ||||||||| ||||||| ||||| |||||||||||    
T  40906385 agttgttaagttgtcttctattcataagttgctaatgaaatgttttatgaagaattattatta 40906323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24048222 - 24048259
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24048222 gtgtcgtttatattattatgagaagatgtttatgatat 24048259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 22635063 - 22635099
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22635063 agttgataagttgtcttttattcatgaattgataatg 22635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 30145982 - 30145947
Alignment:
Q  9 tatattattatgaaaagatgtttatgatattgatta 44  Q
    ||||||||||||| ||||||||||||||||||||||    
T  30145982 tatattattatgagaagatgtttatgatattgatta 30145947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 38106860 - 38106798
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||| ||||||||||| |||| |||| |||||||||  |||||| ||||| |||||||||||    
T  38106860 agttgttaagttgtcttctatttatgagttgctaatgagatgttttatgaagaattattatta 38106798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 13813969 - 13814014
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttg 247  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||    
T  13813969 agttgataagttgtcttctattcatgagttgctaatgagatgtttg 13814014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 13818541 - 13818586
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttg 247  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||    
T  13818541 agttgataagttgtcttctattcatgagttgctaatgagatgtttg 13818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 17142523 - 17142491
Alignment:
Q  6 gtttatattattatgaaaagatgtttatgatat 38  Q
    |||||||||||||||| ||||||||||||||||    
T  17142523 gtttatattattatgagaagatgtttatgatat 17142491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 14764848 - 14764924
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764848 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 14764924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 23372596 - 23372672
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372596 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 23372672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 51299559 - 51299483
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51299559 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 51299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 41160 - 41084
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41160 agttgataagttgtcttttattcatgaattgctaatggaatgtttgaggaataattattattatgaaatgatgatgt 41084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 3801996 - 3801920
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3801996 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 3801920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 9532284 - 9532208
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9532284 agttgataagttgtcttttattcatgaattgttaatggaatgtttgatgaataattattattatgaaatgatgatgt 9532208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 54519623 - 54519547
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54519623 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 54519547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 10834994 - 10835070
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  10834994 agttgataagttgtcttttattcatgaatttctaatgaaatgtttgatgaataattattattatgaaatgatgatgt 10835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 13435844 - 13435768
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  13435844 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 13435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 29545991 - 29546067
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29545991 agttgataagttgtcttttagtcatgaattgctaatggaaggtttgatgaataattattattatgaaatgatgatgt 29546067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18899479 - 18899400
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaat---ggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  18899479 agttgataagttgtcttttattcatgaattgctaataatggaatgtttgatgaataattattattatgaaatgatgatgt 18899400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20249902 - 20249978
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  20249902 agttgataagttgtcttttattcatgaattgctaatggaatattcgatgaataactattattatgaaatgatgatgt 20249978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 12853416 - 12853492
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  12853416 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattgatgatgt 12853492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 8928920 - 8928996
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||| |||||||||    
T  8928920 agttgataagttgtcttttattcatggactgctaatgagatgtttgatgaataattattattatgaattgatgatgt 8928996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 11301718 - 11301794
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  11301718 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 11301794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 16795529 - 16795453
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||||||||    
T  16795529 agttgataagttgtcttttattcatgaattgataatgagacgtttgatgaataattattattatgaattgatgatgt 16795453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 5219873 - 5219797
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| | |||||||    
T  5219873 agttgataagttgtcttttattcatgaattgataatgagacgtttgatgaataattattattatgaattaatgatgt 5219797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 16326094 - 16326158
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataat-tattattat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16326094 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaattatatattattat 16326158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 19774224 - 19774148
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||| | |||||||    
T  19774224 agttgataagttgtcttttattcatgaaatgataatgagatgtttgatgaataattattattatgaattaatgatgt 19774148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 7108262 - 7108188
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  7108262 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 7108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 7112197 - 7112123
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  7112197 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 7112123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11068637 - 11068563
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  11068637 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 11068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 11167148 - 11167222
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  11167148 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 11167222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 15616201 - 15616127
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  15616201 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 15616127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22320153 - 22320079
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  22320153 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 22320079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 22335208 - 22335134
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  22335208 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 22335134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 28948485 - 28948411
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  28948485 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 28948411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 55021400 - 55021326
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  55021400 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 55021326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 30064410 - 30064334
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||  |||||  |||||||| ||||||||||||||||||| | |||||||    
T  30064410 agttgataagttgtcttttattcatgaattaataatgagatgtttgacgaataattattattatgaattaatgatgt 30064334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 4108844 - 4108918
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  || ||||||||||||||||||||||||| | |||||||    
T  4108844 ttgataagttgtcttttattaatgaattgataatgagatatttgatgaataattattattatgaattaatgatgt 4108918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 4112693 - 4112767
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  || ||||||||||||||||||||||||| | |||||||    
T  4112693 ttgataagttgtcttttattaatgaattgataatgagatatttgatgaataattattattatgaattaatgatgt 4112767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 11853732 - 11853666
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||||||||||||| |||||| |||||  ||||||||||||||| ||||||||||||    
T  11853732 agttgataagttgtcttttattcacgaattgataatgagatgtttgatgaataagtattattatgaa 11853666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 12337275 - 12337206
Alignment:
Q  210 agttgtcttttattcatgaattgctaatgga-atgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||||    
T  12337275 agttgtcttttattcatgaattgataattgagatgtttgatgaataagtattattatgaattgatgatgt 12337206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 38312910 - 38312985
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaat-ggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  38312910 agtttataagttgtcttttattcatgaa-tgctaatgggaatgttcgatgaat-attattattatgaaatgatgatgt 38312985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 12304200 - 12304136
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataat-tattattat 265  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||    
T  12304200 agttgataagttgtattttattcatgaattgctgatggaatgtttgatgaattatatattattat 12304136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 14664451 - 14664375
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||  ||||||| | |||||||    
T  14664451 agttgataagttgtcttctattcatgaattgataatgagatgtttgatgaataattatatttatgaattaatgatgt 14664375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 14667615 - 14667539
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||  ||||||| | |||||||    
T  14667615 agttgataagttgtcttctattcatgaattgataatgagatgtttgatgaataattatatttatgaattaatgatgt 14667539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 14497971 - 14497898
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||| | |||||||    
T  14497971 ttgataagttgtcttttattaatgaattgataatgagatg-ttgatgaataattattattatgaattaatgatgt 14497898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 18933409 - 18933475
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||| |||||||||||||||  |||||  |||||||| |||||||||||||||||||    
T  18933409 agttgataagttgtattttattcatgaattaataatgagatgtttgacgaataattattattatgaa 18933475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 15963518 - 15963461
Alignment:
Q  207 ataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  15963518 ataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 15963461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 15967442 - 15967385
Alignment:
Q  207 ataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  15967442 ataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 15967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 15971366 - 15971309
Alignment:
Q  207 ataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  15971366 ataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 15971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9532464 - 9532420
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  9532464 gtgtcgtttatattattatgagaagatgtttatgatattgattac 9532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12304380 - 12304336
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  12304380 gtgtcgtttatattattatgagaagatgtttatgatattgattac 12304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14764668 - 14764712
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  14764668 gtgtcgtttatattattatgagaagatgtttatgatattgattac 14764712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 15564877 - 15564801
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||  |||||||| | ||||||| ||||||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  15564877 agttgatgtgttgtcttctgttcatgagttgctaatgaaatgttttatgaagaattattattatgaattgatgatgt 15564801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 16751954 - 16752030
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||| |||||||||||| || || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  16751954 agttgataagttatcttttattcatcaaatgataatgagatggttgatgaataattattattatgaattaatgatgt 16752030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23372416 - 23372460
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  23372416 gtgtcgtttatattattatgagaagatgtttatgatattgattac 23372460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29545790 - 29545834
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29545790 gtgtcgtttatattattatgagaagatgtttatgatattgattac 29545834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51299739 - 51299695
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  51299739 gtgtcgtttatattattatgagaagatgtttatgatattgattac 51299695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 15555664 - 15555602
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||| ||||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||    
T  15555664 agttgttaagttgtcttatattcatgagttgctaatgagatgtttgatgaagaattattatta 15555602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 17348806 - 17348856
Alignment:
Q  228 aattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  17348806 aattgataatgagatgtttgatgaataattattattatgaaatgatgatgt 17348856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3802176 - 3802132
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||| |||||||||| |||||||||||||||||||||||    
T  3802176 gtgtcgtttacattattatgagaagatgtttatgatattgattac 3802132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 11912453 - 11912382
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   ||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  11912453 agttgataagttgttccttattcatgtattgctaatgagatggttgatgaataattattgttatgaattgat 11912382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10834813 - 10834850
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  10834813 gtgtcgtttatattattatgagaagatgtttatgatat 10834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 15463904 - 15463868
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15463904 agttgataagttgtcttttattcatgaattgataatg 15463868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54519803 - 54519759
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||    
T  54519803 gtgttgtttatattattatgagaagatgtttatgataatgattac 54519759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 14670052 - 14670017
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaat 237  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14670052 agttgataagttgtcttttattcatgaattgataat 14670017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 14681576 - 14681541
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaat 237  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14681576 agttgataagttgtcttttattcatgaattgataat 14681541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16613730 - 16613693
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  16613730 gtgttgtttatattattatgagaagatgtttatgatat 16613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18899673 - 18899636
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  18899673 gtgttgtttatattattatgagaagatgtttatgatat 18899636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22045523 - 22045560
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  22045523 gtgttgtttatattattatgagaagatgtttatgatat 22045560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 10686299 - 10686375
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686299 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 10686375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 19663610 - 19663686
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663610 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 19663686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 20260283 - 20260207
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260283 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 20260207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 9240700 - 9240624
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9240700 agttgataagttgtcttctattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 9240624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 37379062 - 37378986
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37379062 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaaaaattattattatgaaatgatgatgt 37378986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 6481810 - 6481734
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6481810 agttgataggttgtcttttattcatgaattgctaatggaacgtttgatgaataattattattatgaaatgatgatgt 6481734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 6485277 - 6485201
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6485277 agttgataggttgtcttttattcatgaattgctaatggaacgtttgatgaataattattattatgaaatgatgatgt 6485201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 21074560 - 21074636
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  21074560 agttgataagttgtcttttattcatgaattgctaaaaaaatgtttgatgaataattattattatgaaatgatgatgt 21074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 10103351 - 10103425
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  10103351 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 10103425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 12902661 - 12902735
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  12902661 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 12902735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 24630102 - 24630176
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  24630102 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 24630176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 24645175 - 24645101
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  24645175 ttgataagttgtcttttattaatgaattggtaatgagatgtttgatgaataattattattatgaattaatgatgt 24645101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 24647118 - 24647044
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  24647118 ttgataagttgtcttttattaatgaattggtaatgagatgtttgatgaataattattattatgaattaatgatgt 24647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 24647951 - 24647877
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  24647951 ttgataagttgtcttttattaatgaattggtaatgagatgtttgatgaataattattattatgaattaatgatgt 24647877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 30346712 - 30346786
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  30346712 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 30346786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 27381048 - 27381112
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  27381048 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaa 27381112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 27385018 - 27385082
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||    
T  27385018 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaa 27385082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 31343943 - 31343867
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||| |||||||||||||||||||| ||| |  |||||||||||||||||||||||||||| | |||||||    
T  31343943 agttgataagctgtcttttattcatgaattgataaagagatgtttgatgaataattattattatgaattaatgatgt 31343867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 27600395 - 27600321
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||| ||||||| | |||||||    
T  27600395 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattgttatgaattaatgatgt 27600321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 41532497 - 41532557
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  41532497 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 41532557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20260463 - 20260419
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20260463 gtgtcgtttatattattatgagaagatgtttatgatattgattac 20260419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6262086 - 6262130
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  6262086 gtgtcgtttataatattatgagaagatgtttatgatattgattac 6262130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10686162 - 10686206
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  10686162 gtgtcgtttatattattatgagaagatatttatgatattgattac 10686206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19663364 - 19663408
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgattac 45  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  19663364 gtgtcgtttataatattatgagaagatgtttatgatattgattac 19663408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9240873 - 9240836
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9240873 gtgtcgtttatattattatgagaagatgtttatgatat 9240836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 9784020 - 9783984
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9784020 agttgataagttgtcttttattcatgaattgataatg 9783984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21074380 - 21074423
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatattgatta 44  Q
    ||||| ||||||||||||||| || |||||||||||||||||||    
T  21074380 gtgtcatttatattattatgagaatatgtttatgatattgatta 21074423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 32649093 - 32649017
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32649093 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 32649017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 16370951 - 16370875
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16370951 agttgataagttgtcttttattcatgaattgctaatggaatgttcgatgaataactattattatgaaatgatgatgt 16370875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 20439205 - 20439281
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20439205 agttgataagttgtcttttattcatgtattgctaatggaatgtttgatgaataattattattatggaatgatgatgt 20439281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 29533913 - 29533837
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  29533913 agttgataagttgtcttttattcatgaattgctaatgaaatgtttgatgaataattattattatgaattgatgatgt 29533837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 22132151 - 22132227
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  22132151 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaattgatgatgt 22132227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 33796059 - 33795983
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  33796059 agttgataagttgtcttttattcatgaattgataatgatatgtttgatgaataattattattatgaattaatgatgt 33795983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 1009286 - 1009212
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  1009286 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 1009212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 1926850 - 1926924
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  1926850 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 1926924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 16376870 - 16376944
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  16376870 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 16376944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 20230192 - 20230258
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    ||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||    
T  20230192 agttgataagttgtcttttattcatgaattaataatgagatgtttgatgaataattattattatgaa 20230258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 20925864 - 20925938
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  20925864 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 20925938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 41389717 - 41389793
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||| ||||||||||||| || |||||  ||| |||||||||||||||||||||||| | |||||||    
T  41389717 agttgataagttgttttttattcatgaaatgataatgagatggttgatgaataattattattatgaattaatgatgt 41389793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 52634292 - 52634218
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||| | ||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  52634292 ttgataagttattttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 52634218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 39245223 - 39245297
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||  |||||||||||||| || |||||  |||||||||||||||||||||||||||| | |||||||    
T  39245223 agttgataagtt--cttttattcatgaaatgataatgagatgtttgatgaataattattattatgaattaatgatgt 39245297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 39248778 - 39248852
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||  |||||||||||||| || |||||  |||||||||||||||||||||||||||| | |||||||    
T  39248778 agttgataagtt--cttttattcatgaaatgataatgagatgtttgatgaataattattattatgaattaatgatgt 39248852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 41801331 - 41801367
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41801331 agttgataagttgtcttttattcatgaattgataatg 41801367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13883094 - 13883131
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  13883094 gtgttgtttatattattatgagaagatgtttatgatat 13883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 28311805 - 28311769
Alignment:
Q  2 tgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28311805 tgtcctttatattattatgataagatgtttatgatat 28311769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 226 - 150
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  226 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgtaatgatgatgt 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 10874 - 10945
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10874 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 10945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 37585 - 37661
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37585 agttgatacgttgtcttttattcatgtattgctaatggaatgtttgatgaataattattattatgaattgatgatgt 37661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 25620 - 25696
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  25620 agttgataagttgtcttttattcatgaattgataatgtgatgtttgatgaataattattattatgaattgatgatgt 25696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 33963 - 33887
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  33963 agttgataagttgtcttttattcatgaattgctaatgagatgtttgatgaataattattattatgaattgatgatgt 33887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 28498 - 28468
Alignment:
Q  202 agttgataagttgtcttttattcatgaattg 232  Q
    |||||||||||||||||||||||||||||||    
T  28498 agttgataagttgtcttttattcatgaattg 28468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 5268 - 5192
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  5268 agttgataagttgtctattattcatgaaatgctaatggaatgtttgatgaataattattatgatgaattgatgatgt 5192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 8792 - 8868
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||    
T  8792 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattataaaatgatgatgt 8868  T

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Target: scaffold1852 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 873 - 949
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  873 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 949  T

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Target: scaffold0410 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 14870 - 14804
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaa 268  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  14870 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattattattatgaa 14804  T

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Target: scaffold0525 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 5583 - 5659
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||| | |||||||    
T  5583 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattgttattatgaattaatgatgt 5659  T

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Target: scaffold0166 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 11112 - 11188
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||||| | |||||||    
T  11112 agttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattaatattatgaattaatgatgt 11188  T

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Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 70781 - 70705
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  70781 agttgataggttgtcttttattcatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 70705  T

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Target: scaffold0349 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 11075 - 11001
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  11075 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 11001  T

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Target: scaffold0061 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 68610 - 68684
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  68610 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 68684  T

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Target: scaffold0028 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 60380 - 60454
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||| | |||||||    
T  60380 ttgataagttgtcttttattaatgaattgataatgagatgtttgatgaataattattattatgaattaatgatgt 60454  T

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Target: scaffold0327 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 18849 - 18773
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||| ||||||| || |||||||||    
T  18849 agttgataagttgtcatttattcatgaattgataatgagatgtttgatgaataattgttattataaattgatgatgt 18773  T

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Target: scaffold0023 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 11803 - 11727
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||| |||||||||||| ||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||    
T  11803 agttgatatgttgtcttttatacatgaattgataatgagatgtttgatgaataagtattattatgaattgatgatgt 11727  T

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Target: scaffold0157 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 34182 - 34256
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| | |||  |||||||||||||||||||||||||||| | |||||||    
T  34182 ttgataagttgtcttttattaatgaattgatgatgagatgtttgatgaataattattattatgaattaatgatgt 34256  T

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Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 15629 - 15689
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattatta 264  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  15629 ttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtattatta 15689  T

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Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 115405 - 115473
Alignment:
Q  210 agttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| |||| ||||||| |||||||||    
T  115405 agttgtcttttattcatgaattgataatgagatgtttgatgaataagtatttttatgaattgatgatgt 115473  T

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Target: scaffold0299 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 5844 - 5775
Alignment:
Q  210 agttgtcttttattcatgaattgctaatgga-atgtttgatgaataattattattatgaaatgatgatgt 278  Q
    ||||||||||||||||||||||| |||| || | ||||||||||||| |||||||||||| |||||||||    
T  5844 agttgtcttttattcatgaattgataattgagacgtttgatgaataagtattattatgaattgatgatgt 5775  T

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Target: scaffold1873 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 700 - 641
Alignment:
Q  219 ttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||| ||||||||| |||||  |||||||||||||||||||||||||||| |||||||||    
T  700 ttatccatgaattgataatgagatgtttgatgaataattattattatgaattgatgatgt 641  T

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Target: scaffold1873; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 633 - 605
Alignment:
Q  202 agttgataagttgtcttttattcatgaat 230  Q
    |||||||||||||||||||||||||||||    
T  633 agttgataagttgtcttttattcatgaat 605  T

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Target: scaffold0486 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 8603 - 8540
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattat 265  Q
    |||| ||||||||||||||||||||||| || |||||  ||||||||||||| |||||||||||    
T  8603 agttaataagttgtcttttattcatgaaatgataatgagatgtttgatgaatgattattattat 8540  T

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Target: scaffold0372 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 6375 - 6448
Alignment:
Q  204 ttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgatgatgt 278  Q
    |||||||||||||||||||| |||||||| |||||  ||| ||||||||||| |||||||||||| | |||||||    
T  6375 ttgataagttgtcttttattaatgaattgataatgagatg-ttgatgaataactattattatgaattaatgatgt 6448  T

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Target: scaffold0599 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 4147 - 4076
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatggaatgtttgatgaataattattattatgaaatgat 273  Q
    ||||||||||||||   ||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  4147 agttgataagttgttccttattcatgtattgctaatgagatggttgatgaataattattgttatgaattgat 4076  T

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Target: scaffold0575 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 7013 - 7049
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7013 agttgataagttgtcttttattcatgaattgataatg 7049  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 74384 - 74420
Alignment:
Q  202 agttgataagttgtcttttattcatgaattgctaatg 238  Q
    ||||||||||||||||||||||||||| |||||||||    
T  74384 agttgataagttgtcttttattcatgagttgctaatg 74420  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Original strand, 21390 - 21420
Alignment:
Q  208 taagttgtcttttattcatgaattgctaatg 238  Q
    |||||||||||||||||||||||||||||||    
T  21390 taagttgtcttttattcatgaattgctaatg 21420  T

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Target: scaffold2170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2170
Description:

Target: scaffold2170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1002 - 965
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  1002 gtgttgtttatattattatgagaagatgtttatgatat 965  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4708 - 4745
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  4708 gtgttgtttatattattatgagaagatgtttatgatat 4745  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 57 - 20
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  57 gtgttgtttatattattatgagaagatgtttatgatat 20  T

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Target: scaffold0335; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9136 - 9099
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  9136 gtgttgtttatattattatgagaagatgtttatgatat 9099  T

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Target: scaffold0216 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20886 - 20849
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  20886 gtgtcgtttatattattatgagaaaatgtttatgatat 20849  T

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Target: scaffold0089 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1513 - 1476
Alignment:
Q  1 gtgtcgtttatattattatgaaaagatgtttatgatat 38  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  1513 gtgttgtttatattattatgagaagatgtttatgatat 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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