View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2956_low_4 (Length: 284)

Name: NF2956_low_4
Description: NF2956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2956_low_4
NF2956_low_4
[»] chr1 (10 HSPs)
chr1 (46-284)||(35063447-35063684)
chr1 (47-182)||(26529508-26529643)
chr1 (45-174)||(36573960-36574089)
chr1 (45-181)||(49917387-49917522)
chr1 (45-151)||(36575494-36575600)
chr1 (42-134)||(26531064-26531156)
chr1 (47-133)||(49919676-49919762)
chr1 (45-90)||(26530500-26530545)
chr1 (47-151)||(35062564-35062668)
chr1 (45-90)||(36574954-36574999)
[»] chr5 (5 HSPs)
chr5 (47-284)||(38921455-38921691)
chr5 (47-248)||(35968556-35968757)
chr5 (48-182)||(16727813-16727947)
chr5 (1-45)||(9887895-9887939)
chr5 (144-182)||(16306739-16306777)
[»] chr4 (11 HSPs)
chr4 (45-282)||(30829925-30830160)
chr4 (44-284)||(52190182-52190433)
chr4 (46-174)||(52189185-52189313)
chr4 (60-182)||(31409326-31409445)
chr4 (45-133)||(8480923-8481011)
chr4 (47-130)||(41774644-41774727)
chr4 (48-133)||(8479652-8479738)
chr4 (47-90)||(41780271-41780314)
chr4 (51-128)||(23545329-23545406)
chr4 (196-244)||(8479843-8479891)
chr4 (201-249)||(31409538-31409585)
[»] chr7 (9 HSPs)
chr7 (47-284)||(41739622-41739858)
chr7 (49-130)||(42537718-42537799)
chr7 (47-129)||(45291932-45292014)
chr7 (48-104)||(40601826-40601882)
chr7 (47-129)||(45296057-45296139)
chr7 (47-129)||(38516620-38516702)
chr7 (46-99)||(40600710-40600763)
chr7 (144-181)||(25272069-25272106)
chr7 (47-115)||(33061554-33061622)
[»] chr8 (11 HSPs)
chr8 (46-282)||(17864530-17864777)
chr8 (47-172)||(17863466-17863591)
chr8 (46-181)||(3870767-3870902)
chr8 (47-182)||(32565560-32565695)
chr8 (48-179)||(3872215-3872346)
chr8 (47-118)||(12887715-12887786)
chr8 (47-128)||(5005708-5005789)
chr8 (44-181)||(32564504-32564641)
chr8 (47-90)||(5014842-5014885)
chr8 (47-132)||(37241028-37241113)
chr8 (47-113)||(12888239-12888305)
[»] chr2 (10 HSPs)
chr2 (45-182)||(4753526-4753663)
chr2 (46-174)||(31622039-31622167)
chr2 (46-174)||(36669089-36669217)
chr2 (47-183)||(40894796-40894932)
chr2 (50-108)||(4755036-4755094)
chr2 (47-172)||(35298556-35298681)
chr2 (41-130)||(35306087-35306176)
chr2 (47-127)||(31620525-31620605)
chr2 (42-151)||(36666196-36666306)
chr2 (45-90)||(31621130-31621175)
[»] chr3 (12 HSPs)
chr3 (46-129)||(37464967-37465050)
chr3 (47-184)||(9099560-9099697)
chr3 (47-182)||(19801786-19801919)
chr3 (47-171)||(20997633-20997757)
chr3 (47-182)||(36163383-36163518)
chr3 (41-181)||(36164503-36164643)
chr3 (48-182)||(37463680-37463814)
chr3 (47-134)||(11137912-11137999)
chr3 (201-249)||(19801947-19801995)
chr3 (47-115)||(18939847-18939915)
chr3 (47-78)||(18912548-18912579)
chr3 (145-174)||(20884324-20884353)
[»] chr6 (8 HSPs)
chr6 (42-181)||(18192932-18193071)
chr6 (47-181)||(18191746-18191880)
chr6 (45-129)||(9448745-9448829)
chr6 (46-182)||(30758798-30758934)
chr6 (47-181)||(11020315-11020449)
chr6 (45-99)||(226119-226173)
chr6 (47-99)||(227233-227285)
chr6 (145-182)||(21396392-21396429)
[»] scaffold0115 (4 HSPs)
scaffold0115 (47-133)||(6055-6141)
scaffold0115 (47-133)||(13795-13881)
scaffold0115 (47-133)||(4336-4422)
scaffold0115 (47-133)||(12076-12162)


Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 46 - 284
Target Start/End: Complemental strand, 35063684 - 35063447
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  35063684 agagtaaaccctcatttgggtctctgaaagtgttgctcactatcaggcacatctctagatcaatgaaacgaaccaaaaactcccccaattattgtttcgt 35063585  T
Q  146 tagtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttctt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  35063584 tagtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgacaacaatcatgtttctgccttcatcttctt 35063485  T
Q  246 caatcttcttcaatgcccccaattcctttcatcttctcc 284  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  35063484 caatcttcttcaatgcccccaattcc-ttcatcttctcc 35063447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 26529508 - 26529643
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||  ||||| |||||||||||||||||||| ||||  |||||  |||    
T  26529508 gagtaaaccctcatttgggtccctgaaagtgtacctcgctatcagacacgtccctgaatcaagaaaacgaactaaaaactccctcaatgtttgttctgtt 26529607  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||||||||||||||||||||| |||||||    
T  26529608 agtcaaatgcatccaaaacgttaacttgatgttaac 26529643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 174
Target Start/End: Original strand, 36573960 - 36574089
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcg 144  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||  ||| |||||  ||||| |||||||||||||||||||| ||||   |||| ||    
T  36573960 aagagtaaacactcatttaggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgaactaaaaactccctcaatgtctgttccg 36574059  T
Q  145 ttagtcaaatgcatccaaaacgttaacttg 174  Q
    ||||||||||||||||||||||||||||||    
T  36574060 ttagtcaaatgcatccaaaacgttaacttg 36574089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 49917387 - 49917522
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcg 144  Q
    |||||||||| |||||||||||| |||||||| | ||||||||| || ||||||| | |||||||  || |||||||||||||||  | |  ||| |  |    
T  49917387 aagagtaaactctcatttgggtctctgaaagtatagctcgctat-agtcacatccttggatcaatttaatgaactaaaaactcccgtattgtttgatctg 49917485  T
Q  145 ttagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  49917486 ttagtcaaatgcatccaaaatgttaacttgatgttaa 49917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 36575600 - 36575494
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcg 144  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||| ||| ||| || ||||| ||||||||| ||||||| || ||||   |||| ||    
T  36575600 aagagtaaaccctcatttgagtccctgaaagtgtacctcgctatcagacacgtccttaaatcaagaaaacgaaccaaaaacttcctcaatgtctgttccg 36575501  T
Q  145 ttagtca 151  Q
    |||||||    
T  36575500 ttagtca 36575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 26531156 - 26531064
Alignment:
Q  42 tttaagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaat 134  Q
    |||| |||||||||||||||| |||||||||||||||  |||||||| || ||| |||||  ||||| ||||||||| |||||||||| ||||    
T  26531156 tttatgagtaaaccctcattttggtccctgaaagtgtacctcgctattagacacgtccctgaatcaagaaaacgaaccaaaaactccctcaat 26531064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 49919762 - 49919676
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    |||||||| ||||||||||||| |||||||||   |||||||||| ||| ||||| ||||||| ||||| || ||||||||||||||    
T  49919762 gagtaaactctcatttgggtccttgaaagtgtgcatcgctatcagtcacttccctggatcaatgaaacgcaccaaaaactcccccaa 49919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 26530500 - 26530545
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatca 90  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  26530500 aagagtaaaccttcatttgggtccctgaaagtgtacctcgctatca 26530545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 35062564 - 35062668
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||| |||||||||| ||| |||||    |||| |||||  |||||||||  |||||| |||| ||| |||||||||||||||  ||||| ||||    
T  35062564 gagtaaaccttcatttgggttcctaaaagttcacctcgttatcaaccacatccctgaatcaattaaactaaccaaaaactcccccaatgtttgttccgtt 35062663  T
Q  147 agtca 151  Q
    |||||    
T  35062664 agtca 35062668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 36574954 - 36574999
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatca 90  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||    
T  36574954 aagagtaaactttcatttgggtccctgaaagtgtacctcgctatca 36574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 47 - 284
Target Start/End: Original strand, 38921455 - 38921691
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||    
T  38921455 gagtaaaccctcatttgggtccctgaaagtgttgctcactatcaggcacatccctagatcaatgaaatgaaccaaaaactcccccaatgattgtttcgtt 38921554  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttcttc 246  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||    
T  38921555 agtcaaatgcatccaaaacgttaacttggtgttaactctgttatactcatagatgagggaccaaaatgacaacaatcatgtttctgccatcatcttcttc 38921654  T
Q  247 aatcttcttcaatgcccccaattcctttcatcttctcc 284  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  38921655 aatcttcttcaatgcccccaattcc-ttcatcttctcc 38921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 47 - 248
Target Start/End: Complemental strand, 35968757 - 35968556
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||||| | |||| ||||||||||||||| |||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||| |||    
T  35968757 gagtaaacccttaattggatccctgaaagtgttgttcgctatcaggcacattcatagatcaatgaaacgaaccaaaaactcccccaattattgttttgtt 35968658  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttcttc 246  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||  |||||||||||| ||| |||||||||||    
T  35968657 agtcaaatgcatccaaaacgttaacttggtgttaactttgttatactcatagatgagggaccaaaatgacaacaatcatgtttccgccatcatcttcttc 35968558  T
Q  247 aa 248  Q
    ||    
T  35968557 aa 35968556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 16727813 - 16727947
Alignment:
Q  48 agtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtta 147  Q
    |||||||||||||||||||| ||||||||||  ||||||||||| ||| | |||  ||||| ||||||||||||||||| || ||||   |||| |||||    
T  16727813 agtaaaccctcatttgggtcgctgaaagtgtacctcgctatcagccacgttcctgaatcaagaaaacgaactaaaaacttcctcaatgtctgttccgtta 16727912  T
Q  148 gtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||||||||||| |||||||| |||||||    
T  16727913 gtcaaatgcatccaaaacattaacttgatgttaac 16727947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9887939 - 9887895
Alignment:
Q  1 ttaattgatatggtttaaagatctttagtgcaattcttttattta 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9887939 ttaattgatatggtttaaagatctttagtgcaattcttttattta 9887895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 16306777 - 16306739
Alignment:
Q  144 gttagtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  16306777 gttagtcaaatgcatctaaaacgttaacttggagttaac 16306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 45 - 282
Target Start/End: Original strand, 30829925 - 30830160
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcg 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  30829925 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaatgaaacgaaccaaaaactcccccaatgattgtttcg 30830024  T
Q  145 ttagtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttct 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||| |    
T  30830025 ttagtcaaatgcatccaaaacgttaacttggtgttaactctgttatactcatagatgagggaccaaaatga-cacaatcatgtttctgccatcatctttt 30830123  T
Q  245 tcaatcttcttcaatgcccccaattcctttcatcttct 282  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  30830124 tcaatcttcttcaatgccctcaattcc-ttcatcttct 30830160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 44 - 284
Target Start/End: Complemental strand, 52190433 - 52190182
Alignment:
Q  44 taagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttc 143  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||| || |||| | ||||||| |||||||| |||||||||||||||   |||||     
T  52190433 taagagtaaaccctcatttgggtccctgaaagtgcatctcgctatcagccagatccatggatcaattaaacgaaccaaaaactcccccaatgtctgtttt 52190334  T
Q  144 gttagtcaaatgcatccaaaacgttaacttggtgttaa------------ctccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttct 231  Q
    ||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  52190333 gttagtcaaatgcatccaaaacgttaacttggtgttaaatgtgctgatgtgtccgttatactcatagacgagggaccaaaatgacaacaatcatgtttct 52190234  T
Q  232 gccttcatcttcttcaatcttcttcaatgcccccaattcctttcatcttctcc 284  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  52190233 gccttcatcttcttcaatcttcttcaatgccctcaattcc-ttcatcttctcc 52190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 52189185 - 52189313
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| ||||||| |||| ||  |||||||| | ||||   |||| |||    
T  52189185 agagtaaaccctcatttgggtccctgaaagtgcacctcgctatcagccacatccctggatcaattaaacaaatcaaaaactcgctcaatgtatgttccgt 52189284  T
Q  146 tagtcaaatgcatccaaaacgttaacttg 174  Q
    |||||||||||||||||||||||||||||    
T  52189285 tagtcaaatgcatccaaaacgttaacttg 52189313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 31409326 - 31409445
Alignment:
Q  60 tttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgttagtcaaatgcatc 159  Q
    ||||||||||||||||||   ||||||||||  ||| ||| | ||||||  |||||||| |||||||||| ||  |   ||| |||||||||||||||||    
T  31409326 tttgggtccctgaaagtgcacctcgctatcaaccacgtccttggatcaaataaacgaaccaaaaactccctcatct---gttccgttagtcaaatgcatc 31409422  T
Q  160 caaaacgttaacttggtgttaac 182  Q
    |||||||||||||||||||||||    
T  31409423 caaaacgttaacttggtgttaac 31409445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 8481011 - 8480923
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    |||| ||||| |||||||| ||||||||||||||  ||||||||||| ||| ||||| ||||||| ||||| || ||||||||||||||    
T  8481011 aagaataaactctcatttgagtccctgaaagtgtatctcgctatcagtcacgtccctggatcaatgaaacgcaccaaaaactcccccaa 8480923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 41774644 - 41774727
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccc 130  Q
    |||||||| |||||||||||||||||||||||  ||||||||||  ||| |||||  ||||| |||||| |  |||||||||||    
T  41774644 gagtaaactctcatttgggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgcaaaaaaaactcccc 41774727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 8479652 - 8479738
Alignment:
Q  48 agtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaa-ctcccccaa 133  Q
    |||||| ||||||||||||||||||||||||  || |||||||| ||| | ||| |||||||| |||| || ||||| |||||||||    
T  8479652 agtaaatcctcatttgggtccctgaaagtgtatcttgctatcagccacgttcctggatcaatacaacgcaccaaaaacctcccccaa 8479738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 41780314 - 41780271
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatca 90  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||    
T  41780314 gagtaaaccctcatttgggtctctgaaagtgtacctcgctatca 41780271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 23545406 - 23545329
Alignment:
Q  51 aaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcc 128  Q
    ||||||||||||| |||| |||||||||  || |||||||| ||| || ||  ||||| ||||||||| |||||||||    
T  23545406 aaaccctcatttgagtccttgaaagtgtaccttgctatcagacacgtctctgaatcaagaaaacgaaccaaaaactcc 23545329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 8479843 - 8479891
Alignment:
Q  196 tagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttct 244  Q
    |||||||||||||||||||| |  ||| ||||| |||||||||||||||    
T  8479843 tagacgagggaccaaaatgatcagaattatgttcctgccttcatcttct 8479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 31409538 - 31409585
Alignment:
Q  201 gagggaccaaaatgaccgcaatcatgtttctgccttcatcttcttcaat 249  Q
    |||||| |||||||||| |||| ||||| ||||||||||||||||||||    
T  31409538 gagggatcaaaatgaccacaattatgtt-ctgccttcatcttcttcaat 31409585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 47 - 284
Target Start/End: Original strand, 41739622 - 41739858
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  41739622 gagtaaaccctcatttgggttcctgaaagtattgctcgctatcaggcacatccctagatcaatgaaacgaaccaaaaactcccccaatgattgtttcgtt 41739721  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaactccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgccttcatcttcttc 246  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||  |||||||||||||||| ||||||| |||    
T  41739722 agtcaaatgcatccaaaacgttaacttggtgttaactctgttatactcatagatgagggatcaaaatgacaacaatcatgtttctgccatcatctttttc 41739821  T
Q  247 aatcttcttcaatgcccccaattcctttcatcttctcc 284  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  41739822 aatcttcttcaatgcccccaattcc-ttcatcttctcc 41739858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 42537718 - 42537799
Alignment:
Q  49 gtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccc 130  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||||||||    
T  42537718 gtaaaccctcagttgggtccctgaaagtgttgctcgctatcaggtacatccctgaatcaatgaaacgaaccaaaaactcccc 42537799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 45292014 - 45291932
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccc 129  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||  || ||||| ||||||||||    
T  45292014 gagtaaaccctcatttgggtccctgaaagtgtacctcgctatcaggcacatccctgaatcaaggaatcgaaccaaaaactccc 45291932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 40601882 - 40601826
Alignment:
Q  48 agtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctaga 104  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40601882 agtaaaccctcatttgggtccctgaaagtgtgcctcgctatcaggcacatccctaga 40601826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 45296139 - 45296057
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccc 129  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||| | ||||||  || ||||| ||||||||||    
T  45296139 gagtaaaccctcatttgggtccctaaaagtgtacctcgctatcaggcacatccatggatcaaggaatcgaaccaaaaactccc 45296057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 38516620 - 38516702
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccc 129  Q
    ||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||  || | ||| ||||||||||    
T  38516620 gagtaaaccctcatttgggtccctgaaagtgtacatcgctatcagacacatccctggatcaaggaatccaaccaaaaactccc 38516702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 40600710 - 40600763
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatcc 99  Q
    ||||||||||||||||||||||||||||| |||  ||| |||||||||||||||    
T  40600710 agagtaaaccctcatttgggtccctgaaaatgtgcctctctatcaggcacatcc 40600763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 25272106 - 25272069
Alignment:
Q  144 gttagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  25272106 gttagtcaaatgcattcaaaacgttaacttagtgttaa 25272069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 33061554 - 33061622
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacg 115  Q
    ||||||| ||| |||||||||  |||||||||  |||||| |||||||||||||| || ||| ||||||    
T  33061554 gagtaaatccttatttgggtctttgaaagtgtgcctcgctgtcaggcacatccctggaacaagaaaacg 33061622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 46 - 282
Target Start/End: Complemental strand, 17864777 - 17864530
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    ||||||||||||||||||| ||| ||||||||   ||||||||||| ||||||||  ||||||  |||||||| || ||||||| ||||   | ||| ||    
T  17864777 agagtaaaccctcatttggttccttgaaagtgcatctcgctatcagccacatccccggatcaaataaacgaaccaagaactccctcaatgtctattttgt 17864678  T
Q  146 tagtcaaatgcatccaaaacgttaacttggtgttaact------------ccgttatactcatagacgagggaccaaaatgaccgcaatcatgtttctgc 233  Q
    |||||||||||||||||||| ||||||||||||||| |            || |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  17864677 tagtcaaatgcatccaaaacattaacttggtgttaattgtgttgatgtgtccattatactcatagactagggaccaaaatgacagcaatcatgtttctgc 17864578  T
Q  234 cttcatcttcttcaatcttcttcaatgcccccaattcctttcatcttct 282  Q
    |||||||||||||||||||||||||||  | ||||||| ||||||||||    
T  17864577 cttcatcttcttcaatcttcttcaatgttctcaattcc-ttcatcttct 17864530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 17863466 - 17863591
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||||||||||||||||   ||||||||||| ||||||| | ||||||| |||  ||| ||||||||| |||||   |||| |||     
T  17863466 gagtaaaccctcatttgggtccctgaaagtgcacctcgctatcagccacatccttggatcaattaaataaaccaaaaactcctccaatgtatgttccgtc 17863565  T
Q  147 agtcaaatgcatccaaaacgttaact 172  Q
    ||||||||||||||||||||||||||    
T  17863566 agtcaaatgcatccaaaacgttaact 17863591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 3870767 - 3870902
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    |||||||||||||| |||||||||||||| ||    |||||||||| ||| ||||||||||||| || ||||  |||||||||||||||  ||||| |||    
T  3870767 agagtaaaccctcacttgggtccctgaaaatgcatttcgctatcagccacgtccctagatcaattaagcgaatcaaaaactcccccaatagttgttccgt 3870866  T
Q  146 tagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    ||||||| | | ||||||||||||| || |||||||    
T  3870867 tagtcaatttcgtccaaaacgttaagttcgtgttaa 3870902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 32565695 - 32565560
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||| ||| |||||||||||||||  ||||||||||| |   ||||| |||||||  || |||  |||||||||||||||    |||  |||    
T  32565695 gagtaaaccctcgtttaggtccctgaaagtgtccctcgctatcagaccagtccctcgatcaatttaatgaatcaaaaactcccccaatgtacgttatgtt 32565596  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||||||||||||||||||||| |||||||    
T  32565595 agtcaaatgcatccaaaacgttaacttgatgttaac 32565560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 3872346 - 3872215
Alignment:
Q  48 agtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtta 147  Q
    ||||||||||| ||||||||||||||||||   ||||||||||| ||| |||||  |||||| |||||||| |||||||| | ||||  || || |||||    
T  3872346 agtaaaccctcgtttgggtccctgaaagtgcacctcgctatcagccacgtccctgtatcaattaaacgaaccaaaaactctctcaatggttattccgtta 3872247  T
Q  148 gtcaaatgcatccaaaacgttaacttggtgtt 179  Q
    ||||| | | ||||||||||||| ||| ||||    
T  3872246 gtcaatttcgtccaaaacgttaagttgttgtt 3872215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 12887786 - 12887715
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaac 118  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||| || |||||| |||||| ||| |||||    
T  12887786 gagtaaaccctcatttgggtccctgaaagtgtacctcgcgatcagacatatccctggatcaagaaatcgaac 12887715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 5005708 - 5005789
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcc 128  Q
    ||||||||||||||||||||||||||||||||  ||||||||||  ||| |||||  ||||| |||||| |  |||||||||    
T  5005708 gagtaaaccctcatttgggtccctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgcaaaaaaaactcc 5005789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 32564504 - 32564641
Alignment:
Q  44 taagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttc 143  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||||||| |   ||||| |||||| | ||   | ||||||||||| ||||  | ||| |    
T  32564504 taagaataaaccctcatttgggtccttgaaagtgtccctcgctatcagaccagtccctcgatcaacataaattattaaaaactccctcaatgttagttcc 32564603  T
Q  144 gttagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
     | |||||| |  |||||||||||||||||||||||||    
T  32564604 atcagtcaatttaatccaaaacgttaacttggtgttaa 32564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 5014885 - 5014842
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatca 90  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  5014885 gagtaaaccctcatttgggtccctgaaagtgtacctcgctatca 5014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 37241028 - 37241113
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccccca 132  Q
    ||||||| |||| ||||||| |||||||||||  ||||||||||| ||| | | | ||||||| ||||| || |||||||||||||    
T  37241028 gagtaaatcctcgtttgggttcctgaaagtgtatctcgctatcagtcacgttcttggatcaatgaaacgcaccaaaaactccccca 37241113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 12888305 - 12888239
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaa 113  Q
    ||||||| ||||||||| |||||||||| |||  ||||||||||| ||| |||| ||||||| ||||    
T  12888305 gagtaaatcctcatttgagtccctgaaattgtacctcgctatcagacacgtcccaagatcaagaaaa 12888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 4753526 - 4753663
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcg 144  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |   ||||| ||||||| ||| |||  |||||||||| ||||   ||||| |    
T  4753526 aagagtaaaccctcgtttgggtccctgaaagtgtctctcgctatcagaccagtccctggatcaattaaatgaatcaaaaactccctcaatgtatgttttg 4753625  T
Q  145 ttagtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4753626 ttagtcaaatgcatccaaaacgttaacttggtgttaac 4753663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 31622167 - 31622039
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    |||||||||||| ||||||||||||||||||||  |||| |||||  ||| |||||  ||||| ||||| |||||||||||||| ||||  ||||| |||    
T  31622167 agagtaaacccttatttgggtccctgaaagtgtacctcgttatcaaccacgtccctgaatcaagaaaacaaactaaaaactccctcaatgtttgttccgt 31622068  T
Q  146 tagtcaaatgcatccaaaacgttaacttg 174  Q
    | |||||||||||||||||||||||||||    
T  31622067 ttgtcaaatgcatccaaaacgttaacttg 31622039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 36669217 - 36669089
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    |||||||||||| |||||| ||| ||||||||   ||||||||||| ||| |||||  ||||| ||||| |||||||||||||| ||||   ||||  ||    
T  36669217 agagtaaaccctaatttggatccatgaaagtgcacctcgctatcagccacgtccctgaatcaagaaaacaaactaaaaactccctcaatgtctgttctgt 36669118  T
Q  146 tagtcaaatgcatccaaaacgttaacttg 174  Q
    |||||||||||||||||||||||||||||    
T  36669117 tagtcaaatgcatccaaaacgttaacttg 36669089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 40894932 - 40894796
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||| ||||| |||||||  |||||||||||| || ||||| ||||||| ||||||||||||||||||||||||   | || ||||    
T  40894932 gagtaaaccctcatttggatccctaaaagtgtacctcgctatcaggtacgtccctggatcaatgaaacgaactaaaaactcccccaatgtcttttccgtt 40894833  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaact 183  Q
    |||||    | ||||||||||||||| || |||||||    
T  40894832 agtcattcacgtccaaaacgttaactgggcgttaact 40894796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 4755094 - 4755036
Alignment:
Q  50 taaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaa 108  Q
    |||||||||||||||||| ||||||||||  ||||||||||| ||| ||||||||||||    
T  4755094 taaaccctcatttgggtctctgaaagtgtccctcgctatcagacacgtccctagatcaa 4755036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 35298556 - 35298681
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||||| |||||||||||  ||||||||||  ||| |||||  ||||| |||||| |  ||||||||||| ||    | |||||||    
T  35298556 gagtaaaccctcatttgggttcctgaaagtgtacctcgctatcaaccacgtccctgaatcaagaaaacgcaaaaaaaactccccgaaagtctctttcgtt 35298655  T
Q  147 agtcaaatgcatccaaaacgttaact 172  Q
    |||||    |||||||||||||||||    
T  35298656 agtcattcccatccaaaacgttaact 35298681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 35306176 - 35306087
Alignment:
Q  41 atttaagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccc 130  Q
    |||| ||||||||||||||||| |||||||||||||||  ||||||||||  ||  |||||  ||||| ||||||||  |||||||||||    
T  35306176 attttagagtaaaccctcatttaggtccctgaaagtgtacctcgctatcaaacatgtccctgaatcaagaaaacgaaaaaaaaactcccc 35306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 31620525 - 31620605
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactc 127  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||  || ||| |  ||||| ||||||||| ||||||||    
T  31620525 gagtaaaccctcatttgagtccctgaaagtgtacctcgctatcagatacgtccttgaatcaagaaaacgaaccaaaaactc 31620605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 36666196 - 36666306
Alignment:
Q  42 tttaagagtaaaccctcatttgggtc-cctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgt 140  Q
    |||||||||||||||| ||||||||| | |||||||||  ||||| || || |||||  ||  ||||| ||||||||||||||||| || ||||   |||    
T  36666196 tttaagagtaaacccttatttgggtcacttgaaagtgtacctcgcaattagacacatttctgaatcaagaaaacgaactaaaaacttcctcaatgtctgt 36666295  T
Q  141 ttcgttagtca 151  Q
    | |||||||||    
T  36666296 tccgttagtca 36666306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 31621175 - 31621130
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatca 90  Q
    ||||||||||| |||||||||||||| |||||||  ||||||||||    
T  31621175 aagagtaaaccttcatttgggtccctaaaagtgtacctcgctatca 31621130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 37465050 - 37464967
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccc 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||    
T  37465050 agagtaaaccctaatttgggtccctgaaagtgttgctcgctatcaggtacatccctagatcaatgaaacaaaccaaaaactccc 37464967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 9099560 - 9099697
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||||||||| |||||||  |||||||||| ||||||||||  |||||| |||||||| ||||||||   ||||  | ||| ||||    
T  9099560 gagtaaaccctcatttgggtcccttaaagtgtacctcgctatcaagcacatccctgaatcaatgaaacgaaccaaaaactctttcaatgttggttccgtt 9099659  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaactc 184  Q
    ||||||||   |||||||||||||||| ||||||||||    
T  9099660 agtcaaataagtccaaaacgttaacttagtgttaactc 9099697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 19801786 - 19801919
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||  |||||||||||||||  |||||||||||  || ||| ||||||||| |||||||| |||||||||||||  | ||| || |||    
T  19801786 gagtaaaccctcattccggtccctgaaagtgtacctcgctatcagctacgtccttagatcaattaaacgaaccaaaaactccccca--ttttgatttgtt 19801883  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    ||||||||  ||||||||||||||||| ||||||||    
T  19801884 agtcaaatttatccaaaacgttaactttgtgttaac 19801919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 20997633 - 20997757
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    |||||||||||||||||||||||||||| |||  |||||||||| |||||||||  |||||||||||| ||| |||||||||  ||||  | ||||||||    
T  20997633 gagtaaaccctcatttgggtccctgaaaatgtacctcgctatcaagcacatcccaggatcaataaaacaaaccaaaaactccttcaatgttggtttcgtt 20997732  T
Q  147 agtcaaatgcatccaaaacgttaac 171  Q
    ||||||||   ||||||||||||||    
T  20997733 agtcaaataagtccaaaacgttaac 20997757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 36163383 - 36163518
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||| |||||||| |||||||||||||  ||||||||||| |  ||||||  ||||||  || |||  |||||||||||||||    |||  |||    
T  36163383 gagtaaaccttcatttggatccctgaaagtgtccctcgctatcagaccaatccctcaatcaatttaatgaatcaaaaactcccccaatgtacgttatgtt 36163482  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    ||||||||||||||||||||||||||||||||||||    
T  36163483 agtcaaatgcatccaaaacgttaacttggtgttaac 36163518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 36164643 - 36164503
Alignment:
Q  41 atttaagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgt 140  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |   ||||| |||||| | ||   | ||||||||| | ||||  | ||    
T  36164643 atttaagagtaaaccctcatttgggtccctgaaagtgtccctcgctatcagaccagtccctcgatcaacagaaattattaaaaactctctcaatgttagt 36164544  T
Q  141 ttcgttagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    | |||||||||| |  |||||||||||||||||||||||||    
T  36164543 tccgttagtcaatttaatccaaaacgttaacttggtgttaa 36164503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 37463680 - 37463814
Alignment:
Q  48 agtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtta 147  Q
    |||||||||||  |||||| |||||||||||| |||||||||| |||| ||||| ||||||| |||||| | ||||||||  | |||   | || | |||    
T  37463680 agtaaaccctcgcttgggttcctgaaagtgtttctcgctatcaagcacgtccctggatcaatgaaacgatccaaaaactcatctaatgtctcttccatta 37463779  T
Q  148 gtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    ||||  | | |||||||||||||||||||||||||    
T  37463780 gtcatttacgtccaaaacgttaacttggtgttaac 37463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 11137912 - 11137999
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaat 134  Q
    |||||||||||||||||| || || ||| |||  ||||||||||| ||||||||| |||||  ||||||||| |||||||||| ||||    
T  11137912 gagtaaaccctcatttggttctctaaaaatgtacctcgctatcagacacatccctggatcatgaaaacgaaccaaaaactccctcaat 11137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 19801947 - 19801995
Alignment:
Q  201 gagggaccaaaatgaccgcaatcatgtttctgccttcatcttcttcaat 249  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  19801947 gagggaccaaaatgaccacaattatgtttctgccttcaacttcttcaat 19801995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 18939915 - 18939847
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacg 115  Q
    ||||||||||||||||||||||||||||||||   |||||||||  ||| ||||||  |||| ||||||    
T  18939915 gagtaaaccctcatttgggtccctgaaagtgtacttcgctatcaaccacgtccctaagtcaagaaaacg 18939847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 18912548 - 18912579
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgt 78  Q
    ||||||||||||||||||||||||||||||||    
T  18912548 gagtaaaccctcatttgggtccctgaaagtgt 18912579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 20884324 - 20884353
Alignment:
Q  145 ttagtcaaatgcatccaaaacgttaacttg 174  Q
    ||||||||||||||||||||||||||||||    
T  20884324 ttagtcaaatgcatccaaaacgttaacttg 20884353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 18193071 - 18192932
Alignment:
Q  42 tttaagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtt 141  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||   ||||| |||||| | ||   | ||||||||||| ||||  | |||    
T  18193071 tttaagagtaaaccctcatttgggtccctgaaagtgtccctcgctatcaggccagtccctcgatcaacataaattattaaaaactccctcaatgttagtt 18192972  T
Q  142 tcgttagtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
      ||||||||| |  |||||||||||||||||||||||||    
T  18192971 ctgttagtcaatttaatccaaaacgttaacttggtgttaa 18192932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 18191746 - 18191880
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||||||||||||||||||||||||||  | ||||||||| |   |||||  ||||||  || |||  |||||||||||||||   ||||  |||    
T  18191746 gagtaaaccctcatttgggtccctgaaagtgtcccacgctatcagaccagtccctcaatcaatttaatgaatcaaaaactcccccaatgtatgttatgtt 18191845  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    |||||||||||||||||||||||||||||| ||||    
T  18191846 agtcaaatgcatccaaaacgttaacttggtattaa 18191880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 9448829 - 9448745
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactccc 129  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||  || ||||| ||||||||||    
T  9448829 aagagtaaaccctcatttgggtccctgaaagtgtacctcgctatcagacacatccctggatcaaggaatcgaaccaaaaactccc 9448745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 30758934 - 30758798
Alignment:
Q  46 agagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgt 145  Q
    ||||||||||||||||||||||| |||||||||  |||||| |||  | | ||  | ||||||||||  |||  |||||||||| ||||   ||||| ||    
T  30758934 agagtaaaccctcatttgggtccttgaaagtgtccctcgctgtcacacccgtcatttgatcaataaattgaatcaaaaactccctcaatgtatgttttgt 30758835  T
Q  146 tagtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30758834 tagtcaaatgcatccaaaacattaacttggtgttaac 30758798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 11020449 - 11020315
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaattattgtttcgtt 146  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |  |||||| |||||| | ||   | ||||||||||| ||||  | ||| | ||    
T  11020449 gagtaaaccctcatttgggtccctgaaagtgtccctcgctatcagaccaatccctcgatcaacagaaattattaaaaactccctcaatgttagttccatt 11020350  T
Q  147 agtcaaatgcatccaaaacgttaacttggtgttaa 181  Q
    |||||| |  |||||||| ||||||||||||||||    
T  11020349 agtcaatttaatccaaaatgttaacttggtgttaa 11020315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 226119 - 226173
Alignment:
Q  45 aagagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatcc 99  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  226119 aagagtaaaccctcatttgggtccttgaaagtgtgcctcgctatcaggcacatcc 226173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 227285 - 227233
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatcc 99  Q
    ||||||||||||||||||||| ||||||||||  ||| |||| ||||||||||    
T  227285 gagtaaaccctcatttgggtctctgaaagtgtgtctcactattaggcacatcc 227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 21396392 - 21396429
Alignment:
Q  145 ttagtcaaatgcatccaaaacgttaacttggtgttaac 182  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  21396392 ttagtcaaatacatccaaaacgctaacttggtgttaac 21396429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 6141 - 6055
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||| | | ||||||||| ||| ||||| || ||||||||||||||    
T  6141 gagtaaaccctcatttgagtccctgaaagtgtacctcgctatcagccccgtccctagattaatgaaacgcaccaaaaactcccccaa 6055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 13881 - 13795
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||| | | ||||||||| ||| ||||| || ||||||||||||||    
T  13881 gagtaaaccctcatttgagtccctgaaagtgtacctcgctatcagccccgtccctagattaatgaaacgcaccaaaaactcccccaa 13795  T

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Target: scaffold0115; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 4336 - 4422
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    |||||||||||| ||||| ||||| |||||||   |||||||||| ||| ||||||||||||| ||||| || ||||||||||||||    
T  4336 gagtaaaccctcgtttggatccctaaaagtgtatatcgctatcagccacgtccctagatcaatgaaacgcaccaaaaactcccccaa 4422  T

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Target: scaffold0115; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 12076 - 12162
Alignment:
Q  47 gagtaaaccctcatttgggtccctgaaagtgttgctcgctatcaggcacatccctagatcaataaaacgaactaaaaactcccccaa 133  Q
    |||||||||||| ||||| ||||| |||||||   |||||||||| ||| ||||||||||||| ||||| || ||||||||||||||    
T  12076 gagtaaaccctcgtttggatccctaaaagtgtatatcgctatcagccacgtccctagatcaatgaaacgcaccaaaaactcccccaa 12162  T

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