View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2958_low_12 (Length: 245)
Name: NF2958_low_12
Description: NF2958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2958_low_12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 37405893 - 37406132
Alignment:
| Q |
6 |
agtggagtagcaaaggcaccctgcagaggttgttgttgctttctatgtaatatttgtaattcatctttggaacatgggaaatcaagggaaaactgcctgg |
105 |
Q |
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| T |
37405893 |
agtggagaaacaaaagcaccctgcagaggttgttgttgctttctatgtaatatttgtaattcagctttggaacatgggaaatcaagggaaaactgcctgg |
37405992 |
T |
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| Q |
106 |
ttggttccgtgnnnnnnntcggaagcaaattgttcaaacttgacaattcaaataaaaatggaaattttcttggttggtcatcatcaccatctccttcaat |
205 |
Q |
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| T |
37405993 |
ttggttcggtgaaaaaaatcggaagcaaattgttcaaacttgacaattcaaataaaaatggaaattttcttggttggtcatcatcaccatctccttcaat |
37406092 |
T |
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| Q |
206 |
tgcattcccctcatcttttccaagaagatataacaagcgt |
245 |
Q |
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| T |
37406093 |
tgcatttccctcatcttttccaagaagatataacaagcgt |
37406132 |
T |
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