View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2960_low_10 (Length: 350)
Name: NF2960_low_10
Description: NF2960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2960_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 26687277 - 26687608
Alignment:
| Q |
1 |
ggaaaccactagtttgaatcaagcatctgacaactcaacaagacaattctatcatcaaaccaaaaagtatgagatcatataatatcatacattcttttga |
100 |
Q |
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| T |
26687277 |
ggaaactactagtttgaatcaagcatctgaaaactcaacaagacaattctatcatcaaaccaaaaagtatgagatcatataatatcatacattcttttga |
26687376 |
T |
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| Q |
101 |
acaattgtttatgtaaatttttgtaatatatttttattaccttgaaagtaactttgatatggatattattttgaattaggatcttttttggttcctggaa |
200 |
Q |
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| T |
26687377 |
acaattgtttatgtaactttttgtaatatatttttattaccttgaaagtaactttgatatggatattattttgaattaggatctttgttggttcctggaa |
26687476 |
T |
|
| Q |
201 |
tattggaggcattgcaccacctcagaatttggtcattgaagattggcttgacacacaaaatgattctgcagatatttatgttttggggtaaaattttctc |
300 |
Q |
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|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26687477 |
tattggaggcattgcaccacctcataatttggacattgaagattggcttgacacacaaaatgattctgcagatatttatgttttggggtaaaattttctc |
26687576 |
T |
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| Q |
301 |
ttattactttacattatttgtaagaatcaact |
332 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
26687577 |
ttattactttacattatttgtaagaatcaact |
26687608 |
T |
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