View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2961-Insertion-5 (Length: 839)
Name: NF2961-Insertion-5
Description: NF2961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2961-Insertion-5 |
 | |
|
| [»] chr2 (7 HSPs) |
| |
|
| [»] chr6 (8 HSPs) |
| |
|
| [»] chr3 (14 HSPs) |
| |
|
| [»] chr7 (8 HSPs) |
| |
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| [»] chr1 (9 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 601; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 601; E-Value: 0
Query Start/End: Original strand, 7 - 839
Target Start/End: Original strand, 31073043 - 31073886
Alignment:
| Q |
7 |
attattatgtacgtagattaattattttttctacttctacacatagcaaaagatttttgactgatataaacttcatagatgttagtatatatagtattta |
106 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31073043 |
attattacgtacgtagattaattatttcttctacttctacacctagcaaaagatttttgactgatataaacttcatagatgttagtata----gtattta |
31073138 |
T |
|
| Q |
107 |
aagcatatatgaaaatgttcttaaggcttaattcaactgataatgtcgcaatagttatgcgggaaatttttcgttgttacttgagtttgtgtgaccctcg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31073139 |
aagcatatatgaaaatgttcttaaggcttaattcaactgataatatcgcaatagttatgcgggaaatttttcgttgttacttgagtttgtgtgaccctcg |
31073238 |
T |
|
| Q |
207 |
ttatcctgcatta-----------------gtaagaaacaaaatatgaatcttttatttactgcaactttagcataaacttgtaacgagtatcagtccaa |
289 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
31073239 |
ttatcctgcattattagataaacatgaatagtaagaaacaaaatatgaatcttttatttactgcaactttagcataaacttgtaacgagtatcagttcaa |
31073338 |
T |
|
| Q |
290 |
attttcttcaacttctaattataaaatactctaaaaccttgtgttacttgatcagagt--aaaaatttggatggtgaatagtgttttcaaagggttttcc |
387 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31073339 |
attttcttaaacttctaattataaaatactctaaaaccttgtgttacttgatcagagtctaaaaatttggatggtgaatagtgttttcaaagggttttcc |
31073438 |
T |
|
| Q |
388 |
tgttgcttttactgcgtataattctgcacgtacatttcctgcgaacatatacgcagataatgttaagaaataacagggctgaagaagaaaaataagcgca |
487 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
31073439 |
tgtt-----tactgcgtataattttgcacgtacatttcctgcaaacatatacgcagataatgttaggaaatataagggctgaagaagaaaaataagcgca |
31073533 |
T |
|
| Q |
488 |
atcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgt |
587 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| | | |
|
|
| T |
31073534 |
atcactacacaagaatgtaatgtgaaaacttcaaaatcagagaaaaaacaacgatcgttgtctaaaccgacaaccagagagttattactatgtgaatttt |
31073633 |
T |
|
| Q |
588 |
tttgcagtacatagatttctctcactctcacc-taatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaag |
686 |
Q |
| |
|
|||||| | |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31073634 |
tttgcaatgcatagacttctctcactctcaccctaatgccccagtataaccacaccctcacaaaacaaatatttaaactaagttagatataagtttaaaa |
31073733 |
T |
|
| Q |
687 |
tgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggatttctc |
786 |
Q |
| |
|
|| || |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
31073734 |
tgctactgactgttgcagttaaatatttaaagaacctaggttcaatatatagcattgatcttcccctcgcttcaccaaactaaccgatgtgggatttctc |
31073833 |
T |
|
| Q |
787 |
caataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31073834 |
caataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
31073886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 643 - 839
Target Start/End: Original strand, 4660117 - 4660310
Alignment:
| Q |
643 |
ctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcatt |
742 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||| || |||| | || | | ||| | |||||| |||||||||||||||| |||| |
|
|
| T |
4660117 |
ctcacaaaccaaatatttaaactaagtcagatataatcttaaagtgctactgaccggtgca-tcaaaaac--aaagaaactaggttcaatatatagcatt |
4660213 |
T |
|
| Q |
743 |
gatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||| |
|
|
| T |
4660214 |
ggtcttccccttgcttcaccaaactaagcgatgtgagatttctccaatagctaatatttttcaatctccttctttatttaagaaacttgacaatcaa |
4660310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 767
Target Start/End: Complemental strand, 20594922 - 20594608
Alignment:
| Q |
455 |
aaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaac |
554 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||||| |||||||||| ||| ||| ||||||||||||| ||||||||| || | |||||||||||| |
|
|
| T |
20594922 |
aaataaaagggctgaagaagaaaaataaacacaatcacaacacaagaatataacgtgaaaactccaaaatcaaagaaaaaactacaaccgttgtctaaac |
20594823 |
T |
|
| Q |
555 |
cgacagctagaga---gttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccacaccctcacaaa |
650 |
Q |
| |
|
|| || | || | |||||| ||||||||| ||| || ||||| |||||||| ||||| || ||| |||||| | |||||||| |||||||| |
|
|
| T |
20594822 |
cggcaaccaggaatttattattattatgtgaaaaaatttacaacacataaccttctctcattctcaccccaatcctccagtacaaccacactctcacaaa |
20594723 |
T |
|
| Q |
651 |
acaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttcc |
750 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| ||||||| |||| | || | |||| | |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
20594722 |
acaaatatttaaactatgtcagatataagcttagagtgttattgaccggtgcatctaaaaa--taaagaacctaggttcaatatatagtcttggtcttcc |
20594625 |
T |
|
| Q |
751 |
ccttgcttcaccaaact |
767 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
20594624 |
ccttgcttcaccaaact |
20594608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 726 - 839
Target Start/End: Original strand, 33301102 - 33301215
Alignment:
| Q |
726 |
gttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaaga |
825 |
Q |
| |
|
|||||||||||| | ||| |||||||||| |||||||| |||||| ||| || || ||||| |||| ||||||||||| |||||||| |||||| |||| |
|
|
| T |
33301102 |
gttcaatatatagccttggtcttccccttacttcaccacactaagtgatatgtgacttctcaaatagctaatatttttcaacctccttatttatttaaga |
33301201 |
T |
|
| Q |
826 |
aacttgacaatcaa |
839 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
33301202 |
aacttgacattcaa |
33301215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 495 - 548
Target Start/End: Original strand, 33300900 - 33300953
Alignment:
| Q |
495 |
cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgt |
548 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
33300900 |
cacaagaatataatgtggaaactccacaatcgaagaaaaaaccacgaccgttgt |
33300953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 552
Target Start/End: Original strand, 33300954 - 33301036
Alignment:
| Q |
470 |
agaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
552 |
Q |
| |
|
||||||||||||| | |||||| |||||||||| ||| ||| ||||| |||||||||| |||||| |||| |||||||||| |
|
|
| T |
33300954 |
agaagaaaaataaacacaatcacaacacaagaatataacgtgaaaactttaaaatcggaggaaaaactacgaccgttgtctaa |
33301036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 552
Target Start/End: Complemental strand, 7371873 - 7371830
Alignment:
| Q |
509 |
gtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
552 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
7371873 |
gtggaaactctaaaaccggagaaaaaaccacgatcattgtctaa |
7371830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 157; Significance: 5e-83; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 442 - 839
Target Start/End: Complemental strand, 32342397 - 32342001
Alignment:
| Q |
442 |
agataatgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacga |
541 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||| | ||||| ||||||||||| ||| |||||||||||||||| |||| ||||||||| | |
|
|
| T |
32342397 |
agataatgttaggaaataacatagctgaagaagaaaaataaacataatcactacacaagaatataacgtggaaactccaaaattggag-aaaaaccacta |
32342299 |
T |
|
| Q |
542 |
tcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccaca |
640 |
Q |
| |
|
|||||||||||||| ||| | | ||| ||||||||||||||| | |||| || ||||| | |||||||||||||| || ||||| |||| | ||||||| |
|
|
| T |
32342298 |
tcgttgtctaaaccaacaaccatagaattattactatgtgaatttttttacaacacataaacttctctcactctcacccgaatgccccagtacaaccaca |
32342199 |
T |
|
| Q |
641 |
ccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatca |
740 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | || | |||| | ||||||| || ||||||||||| | |
|
|
| T |
32342198 |
ctctcacaaaacaaatatttaaactaagtcagatataagcttaaagtgttactgaccggtgcatctaaaaa--caaagaacttatattcaatatatagcc |
32342101 |
T |
|
| Q |
741 |
ttgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattc-aagaaacttgacaatcaa |
839 |
Q |
| |
|
||| ||||||| ||||||||||||||||| |||||| || |||||||||| ||||||||||| ||||| |||||||||| |||||||||||||||||| |
|
|
| T |
32342100 |
ttggtcttccctttgcttcaccaaactaaccgatgtgagacgtctccaataattaatattttttaacctctttctttattcaaagaaacttgacaatcaa |
32342001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 448 - 839
Target Start/End: Original strand, 14766217 - 14766611
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
545 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| | |||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
14766217 |
tgttaggaaataacagggctgaagaagaaaaaataaacacaatcacaaacacaagaatataacgtggaaactccaaaatcggagaaaaaaccacgaccgt |
14766316 |
T |
|
| Q |
546 |
tgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
645 |
Q |
| |
|
|||||||||||||| | ||||| |||| | | ||||||| |||| || ||||||| ||||||||||| |||| ||||| ||| | | |||||| ||| |
|
|
| T |
14766317 |
tgtctaaaccgacaaccagagaattatcattttgtgaaaaattttacaacacatagacttctctcactcacacccaatgccccaatacagccacactctc |
14766416 |
T |
|
| Q |
646 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgat |
745 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| |||||||| || ||||| || | |||| | ||| || |||||||||||||||| | ||| | |
|
|
| T |
14766417 |
acaatgcaaatatttaaactaagtcagatacaagcttaaagtgctattgactagtgcatctaaaaa--caaaaaaactaggttcaatatatagccttggt |
14766514 |
T |
|
| Q |
746 |
cttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||| ||| || ||||||||||||||||| | |||||||| ||||||||| ||||||||||||||| |
|
|
| T |
14766515 |
cttctccttgcttcactaaactaagtgatgttggacataatcaccaataactaatattttctaacctccttgtttattcaacaaacttgacaatcaa |
14766611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 458 - 818
Target Start/End: Original strand, 21118247 - 21118614
Alignment:
| Q |
458 |
taacagggctgaagaagaaaaataag--cgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaacc |
555 |
Q |
| |
|
||||| ||||||||||||||||||| | |||||| ||||||||||| ||| |||||||||||||||||| |||||||||||| | ||||||||||| | |
|
|
| T |
21118247 |
taacaaggctgaagaagaaaaataaaaacacaatcactacacaagaatataacgtggaaactccaaaatcgaagaaaaaaccacaaccgttgtctaaatc |
21118346 |
T |
|
| Q |
556 |
gacagctagagagttattactatgtgaaatgttttgcagtacatag---atttctctcactctca-cctaatgctccaggataaccacaccctcacaaaa |
651 |
Q |
| |
|
|||| | | ||| |||||||||||||||| |||| || |||||| | |||| | ||||||| || ||||| |||| | | ||||| ||||||||| |
|
|
| T |
21118347 |
gacaaccaaagaattattactatgtgaaaatttttacaacacatagagtacttctttaactctcaccccaatgccccagtacacacacactctcacaaaa |
21118446 |
T |
|
| Q |
652 |
caaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccc |
751 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| || |||||| || | |||| | |||||| |||||||||||||||| | ||| ||||| |
|
|
| T |
21118447 |
ctaatatttaaactaagtcagatataagcttaaagtgctattgactggtgcatctaaaaa--caaagaaactaggttcaatatatagccttggccttcct |
21118544 |
T |
|
| Q |
752 |
cttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttcttta |
818 |
Q |
| |
|
|||||||||| |||||||| ||||||||| || ||||||||||||||||||| |||||||| |||| |
|
|
| T |
21118545 |
cttgcttcactaaactaagcgatgtgggacataatcaccaataactaatatttttttacctccttattta |
21118614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 636 - 839
Target Start/End: Original strand, 14763830 - 14764034
Alignment:
| Q |
636 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatata |
735 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||| ||| |||||||| || |||||| | | |||| | |||||| |||| ||||||| | |
|
|
| T |
14763830 |
ccacactctcacaaagcaaatatttaaactaagtcagatacaagcttaaagtgctactgactggtacatctaaaaac--aaagaaactagattcaataaa |
14763927 |
T |
|
| Q |
736 |
tatcattgatcttccccttgcttcaccaaactaagggatgtgggattt---ctccaataactaatattttttcacctccttctttattcaagaaacttga |
832 |
Q |
| |
|
|| | ||| ||||||||||||||||| |||||||| ||||||||| | | ||||||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
14763928 |
tagctttggtcttccccttgcttcactaaactaagcgatgtgggacataatcaccaataactaatattttctaacctccttctttattcaacaaacttga |
14764027 |
T |
|
| Q |
833 |
caatcaa |
839 |
Q |
| |
|
||||||| |
|
|
| T |
14764028 |
caatcaa |
14764034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 745 - 837
Target Start/End: Complemental strand, 20726779 - 20726687
Alignment:
| Q |
745 |
tcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatc |
837 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
20726779 |
tcttcctcttgcttcaccaaactaagcaatgtgggacatcttcaataactaatattttttaacctccttctttattcaagaaacttgacaatc |
20726687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 448 - 584
Target Start/End: Complemental strand, 20727755 - 20727624
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| |||||||||| ||||||||| |||||||| | ||||| |||||||||| |||||||||||||| |||||| ||||||||||||||| ||| |
|
|
| T |
20727755 |
tgttaggaaataacagagctgaagaaaaaaaataaac--aatcacaacacaagaatataatgtggaaactctaaaatcagagaaaaaaccacga---ttg |
20727661 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaaa |
584 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |
|
|
| T |
20727660 |
tctaaaccgacaatcagagaattattactatgtgaaa |
20727624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 637 - 770
Target Start/End: Original strand, 21118714 - 21118845
Alignment:
| Q |
637 |
cacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatat |
736 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||| |||||||| || |||||| || | |||| | |||||| ||||||||||||||| |
|
|
| T |
21118714 |
cacactctcacaaaactaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaactaggttcaatatat |
21118811 |
T |
|
| Q |
737 |
atcattgatcttccccttgcttcaccaaactaag |
770 |
Q |
| |
|
| | ||| ||||| |||||||||| |||||||| |
|
|
| T |
21118812 |
agccttggccttcctcttgcttcactaaactaag |
21118845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 584
Target Start/End: Original strand, 14763667 - 14763799
Alignment:
| Q |
454 |
gaaataacagggctgaagaagaaaaa-taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtcta |
551 |
Q |
| |
|
||||||||||||||||| |||||||| ||| | |||||| | ||||| ||| ||| |||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
14763667 |
gaaataacagggctgaaaaagaaaaaataaacacaatcacaaacacaaaaatataacatggaaactccaaaaccgaagaaaaaaccacgactgttgtcta |
14763766 |
T |
|
| Q |
552 |
aaccgacagctagagagttattactatgtgaaa |
584 |
Q |
| |
|
|||||||| | ||||| |||| ||||||||||| |
|
|
| T |
14763767 |
aaccgacaaccagagaattataactatgtgaaa |
14763799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 146; Significance: 2e-76; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 448 - 839
Target Start/End: Complemental strand, 3371720 - 3371325
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
3371720 |
tgttatgaaataatagggctgaagaagaaaaataatcgcaatcactacacaagaatataacgaggaaactccaaaaccggagaaaaaaccactatcgttg |
3371621 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaa-atgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctc |
645 |
Q |
| |
|
||| |||||||| | ||||| ||||||||||||||| | |||| | ||||||| |||| |||||| ||||| |||| |||||| |||||||| ||| |
|
|
| T |
3371620 |
tcttaaccgacaaccagagaattattactatgtgaattttttttaccacacatagacttctttcactcccacctcaatgtcccaggacaaccacactctc |
3371521 |
T |
|
| Q |
646 |
acaaaacaaatatttaaactaagtcagat----ataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcat |
741 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||||||||||| || ||||||||| | |||| | || ||||||||||| |||||||| | | |
|
|
| T |
3371520 |
acaaagcaaatatttaaattaagtcagatataaataagtttaaagttctattgactgatgcatctaaaaa--caaggaacctaggtttaatatatagcct |
3371423 |
T |
|
| Q |
742 |
tgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|| ||||||| |||||||||||||||||| ||| || || ||||| ||||||||||||||||| | ||| || ||||||||||||| ||||||||||| |
|
|
| T |
3371422 |
tggtcttccctttgcttcaccaaactaagcgatatgagacttctctaataactaatattttttaaactctttttttattcaagaaatttgacaatcaa |
3371325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 448 - 769
Target Start/End: Original strand, 17730878 - 17731199
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgtt |
546 |
Q |
| |
|
||||| |||||||||||| |||||||| ||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
17730878 |
tgttaggaaataacagggttgaagaagcaaaataaacacaatcacaacacaagaatataacgtggaaactccaaaaccggaggaaaaaaccacgaccgtt |
17730977 |
T |
|
| Q |
547 |
gtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccct |
644 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||| |||| | ||||||| |||||||||||||| || ||||| |||| | | ||||| | |
|
|
| T |
17730978 |
gtctaaaccgacaaccagagaattattactatgtgaaattttttagaacacatagacttctctcactctcacccccaatgc-ccagtacactcacactgt |
17731076 |
T |
|
| Q |
645 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
744 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| || |||||| || | ||| | ||||||| |||||||||||||||| | ||| |
|
|
| T |
17731077 |
cacaaagaaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaacaa--taaagaaactaggttcaatatatagccttgg |
17731174 |
T |
|
| Q |
745 |
tcttccccttgcttcaccaaactaa |
769 |
Q |
| |
|
|||||||||||||||| ||||||| |
|
|
| T |
17731175 |
ccttccccttgcttcactaaactaa |
17731199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 448 - 769
Target Start/End: Original strand, 19032109 - 19032430
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgtt |
546 |
Q |
| |
|
||||| |||||||||||| |||||||| ||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
19032109 |
tgttaggaaataacagggttgaagaagcaaaataaacacaatcacaacacaagaatataacgtggaaactccaaaaccggaggaaaaaaccacgaccgtt |
19032208 |
T |
|
| Q |
547 |
gtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccct |
644 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||| |||| | ||||||| |||||||||||||| || ||||| |||| | | ||||| | |
|
|
| T |
19032209 |
gtctaaaccgacaaccagagaattattactatgtgaaattttttagaacacatagacttctctcactctcacccccaatgc-ccagtacactcacactgt |
19032307 |
T |
|
| Q |
645 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
744 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| || |||||| || | ||| | ||||||| |||||||||||||||| | ||| |
|
|
| T |
19032308 |
cacaaagaaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaacaa--taaagaaactaggttcaatatatagccttgg |
19032405 |
T |
|
| Q |
745 |
tcttccccttgcttcaccaaactaa |
769 |
Q |
| |
|
|||||||||||||||| ||||||| |
|
|
| T |
19032406 |
ccttccccttgcttcactaaactaa |
19032430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 454 - 839
Target Start/End: Complemental strand, 1027101 - 1026720
Alignment:
| Q |
454 |
gaaataacagggctgaagaagaaaaa-taagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
552 |
Q |
| |
|
|||||||||||| ||||||||||||| ||| | |||||| || ||| |||| ||| ||| ||||||||||| | ||||||||||||||| || ||||||| |
|
|
| T |
1027101 |
gaaataacagggttgaagaagaaaaaataaacacaatcactatacaggaatataacgtgtaaactccaaaaccagagaaaaaaccacgaccgctgtctaa |
1027002 |
T |
|
| Q |
553 |
accgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaa |
651 |
Q |
| |
|
||||||| | |||||||||||| || || ||| |||| || ||||| | |||| ||||| |||| ||||| |||| | |||||||| |||| ||| |
|
|
| T |
1027001 |
accgacaaccagagagttattagtacgtaaaaaattttacaacacataaacttctgtcacttgcaccccaatgccccagtacaaccacactctcagaaag |
1026902 |
T |
|
| Q |
652 |
caaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccc |
751 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||| ||| || |||||| || | |||| | |||||||||| |||| ||||||| | ||| | ||||| |
|
|
| T |
1026901 |
aaaatatttaaacaaagacagatataagcttatagtactattgactggtgcatctaaaaac--aaagaacctacgttcgatatatagccttggtattccc |
1026804 |
T |
|
| Q |
752 |
cttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
1026803 |
cttgcttcactaaactaaga-atgtgagacttctccaataactaatattttttcacctc---ctttattcaagaaactagacaatcaa |
1026720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 636 - 839
Target Start/End: Original strand, 38183107 - 38183311
Alignment:
| Q |
636 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatata |
735 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||| |||||||| || |||||| || | |||| | |||||| |||| ||||||||| |
|
|
| T |
38183107 |
ccacactctcacaaagcaaatatttaacctaagtcagatataagcttaaagtgctactgactggtgcatctaaaaac--aaagaaactagattcaatata |
38183204 |
T |
|
| Q |
736 |
tatcattgatcttccccttgcttcaccaaactaagggatgtgggattt---ctccaataactaatattttttcacctccttctttattcaagaaacttga |
832 |
Q |
| |
|
|| | ||| ||||| ||||||||||| |||||||| ||||||| || | | ||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
38183205 |
tagccttggtcttcaccttgcttcactaaactaagcgatgtggaatatagtcaccaataactaatattttctaacctccttctttattcaagaaacttga |
38183304 |
T |
|
| Q |
833 |
caatcaa |
839 |
Q |
| |
|
||||||| |
|
|
| T |
38183305 |
caatcaa |
38183311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 464 - 683
Target Start/End: Complemental strand, 3372592 - 3372372
Alignment:
| Q |
464 |
ggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagcta |
563 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||| ||| ||| ||| ||| | ||||||| ||| |||||||||||||||||||||||||||| | |
|
|
| T |
3372592 |
ggctgaagaagaaaaataagcacaaccattacacaaaaatataacgtgtaaattttaaaatcg-agagaaaaccacgatcgttgtctaaaccgacaatca |
3372494 |
T |
|
| Q |
564 |
gagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca--cctaatgctccaggataaccacaccctcacaaaacaaatattta |
661 |
Q |
| |
|
|||| ||||||||||||||||| |||| | | ||| | |||||||||||| | || ||||| ||| | |||||||| | |||||| |||||||||| |
|
|
| T |
3372493 |
gagaattattactatgtgaaattttttataacatataaacttctctcactcttatccccaatgccgcagtacaaccacactcacacaaagcaaatattta |
3372394 |
T |
|
| Q |
662 |
aactaagtcagatataagttta |
683 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
3372393 |
aactaagtcagatatatgttta |
3372372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 448 - 582
Target Start/End: Complemental strand, 43979526 - 43979392
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||| | |||| | ||||||||||| ||| ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
43979526 |
tgttaggaaataacatggctgaagaagaaaaataaacacaataactacacaagaatataacgtggaaactccaaaactggagaaaaaaccacgaccgtta |
43979427 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtga |
582 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||||| |
|
|
| T |
43979426 |
tctaaaccgacaaccagagaattattactatgtga |
43979392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 496 - 619
Target Start/End: Complemental strand, 40195792 - 40195669
Alignment:
| Q |
496 |
acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagt |
595 |
Q |
| |
|
|||||||| ||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||| |||| || |
|
|
| T |
40195792 |
acaagaatataacgtggaaattccaaaaccagagaaaaaaccacgatcgttgtctaaaccgacaaccagagaattattactatgtaaaattttttacaac |
40195693 |
T |
|
| Q |
596 |
acatagatttctctcactctcacc |
619 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
40195692 |
gcatagatttctctcactctcacc |
40195669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 644 - 839
Target Start/End: Complemental strand, 49582716 - 49582525
Alignment:
| Q |
644 |
tcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggt-tcaatatatatcatt |
742 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| |||||| || ||||| ||| | |||| | ||||||| ||||| | |||| || |||| |
|
|
| T |
49582716 |
tcacaaagcaaatatttaaactaagttagatataagtt-aaagtgctactgactaatgcatctaaaaac--aaagaacttaggtctttatatctaacatt |
49582620 |
T |
|
| Q |
743 |
gatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
| |||||||||||||||| || ||||| |||||| ||||||| ||||| ||| |||||||| ||||||||||||||| ||||| ||||||||||| |
|
|
| T |
49582619 |
ggtcttccccttgcttcatcacactaaatgatgtgagatttcttcaatagctattattttttaacctccttctttatttaagaa--ttgacaatcaa |
49582525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 3372336 - 3372286
Alignment:
| Q |
789 |
ataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3372336 |
ataactaatattttttaacctccttctttattcaagaaacttgacaatcaa |
3372286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 782 - 836
Target Start/End: Complemental strand, 44081255 - 44081201
Alignment:
| Q |
782 |
ttctccaataactaatattttttcacctccttctttattcaagaaacttgacaat |
836 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
44081255 |
ttctccaagaactaatatttttttacctccttctttattcaagaaccttgacaat |
44081201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 619
Target Start/End: Original strand, 21344529 - 21344682
Alignment:
| Q |
467 |
tgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaac-cacgatcgttgtctaaaccgacagctaga |
565 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| ||| ||| |||||| ||||| |||||||| ||||| | ||||||||||| ||| | ||| |
|
|
| T |
21344529 |
tgaagaagaaaaataagcacaatcacaacacaagaatataacgtgaaaactctaaaatgaaggaaaaaacacacgaccattgtctaaaccaacaaccaga |
21344628 |
T |
|
| Q |
566 |
gagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacc |
619 |
Q |
| |
|
| |||||| |||||||||| |||| || ||||| | ||||||| |||||||| |
|
|
| T |
21344629 |
taattattagtatgtgaaatcttttacaacacataaacttctctctctctcacc |
21344682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 719 - 804
Target Start/End: Original strand, 21344764 - 21344853
Alignment:
| Q |
719 |
aacctaggttcaatatatat----cattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatatttttt |
804 |
Q |
| |
|
||||||||||||||||||| ||||| |||||| |||| |||||||||||||| ||||| || ||||| |||| |||||||||||| |
|
|
| T |
21344764 |
aacctaggttcaatatatagatagcattggtcttcctcttgattcaccaaactaagcaatgtgagacttctctaatagctaatatttttt |
21344853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 790 - 839
Target Start/End: Original strand, 16869899 - 16869947
Alignment:
| Q |
790 |
taactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
16869899 |
taactaatattttta-acccccttctttattcaagaaacttaacaatcaa |
16869947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 139; Significance: 3e-72; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 448 - 836
Target Start/End: Complemental strand, 41341346 - 41340957
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||| | |||||| |||||||||| ||| |||||||||||||| | ||| |||||||| || ||||| |
|
|
| T |
41341346 |
tgttaggaaataatagggctgaagaagaaaaataaacacaatcacaacacaagaatataacatggaaactccaaaaccagaggaaaaaccatgaccgttg |
41341247 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctcac |
647 |
Q |
| |
|
|||||||||||| | | ||| |||||||||||||||| | || || ||||||| |||||| | ||||||| ||||| |||| | | |||||| ||||| |
|
|
| T |
41341246 |
tctaaaccgacaaccaaagaattattactatgtgaaaattgttacaacacatagacttctctaattctcacccaatgccccagtacacccacactctcac |
41341147 |
T |
|
| Q |
648 |
aaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatct |
747 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |||||||| || |||||| || | |||| | |||||| ||||||| |||||||| | ||| ||| |
|
|
| T |
41341146 |
aaagcaaacatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaactaggtttaatatataactttggtct |
41341049 |
T |
|
| Q |
748 |
tccccttgcttcaccaaactaagggatgtgggattt---ctccaataactaatattttttcacctccttctttattcaagaaacttgacaat |
836 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| | | ||||||||||||||||| | |||||||||||||||||||||| |||||||| |
|
|
| T |
41341048 |
tccccttgcttcactaaactaagcgatgtgggacataaccaccaataactaatattttataacctccttctttattcaagaaatttgacaat |
41340957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 494 - 839
Target Start/End: Original strand, 35429765 - 35430111
Alignment:
| Q |
494 |
acacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgca |
593 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| ||| ||||||||||| |||| |||||||||||| | ||||| |||||||||| ||||| | || || |
|
|
| T |
35429765 |
acacaagaatataacgtggaaactccaaaactagaggaaaaaccacgaccgttatctaaaccgacaaccagagaattattactatttgaaaattattaca |
35429864 |
T |
|
| Q |
594 |
gtacatagatttctctcactctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagt |
693 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| | | |||||| |||||||| |||||||||||||||||||||||||||| |||||||| || | |
|
|
| T |
35429865 |
acacatagacttctctaactctcacccaatgccccagtacacccacactctcacaaagcaaatatttaaactaagtcagatataagcttaaagtgctact |
35429964 |
T |
|
| Q |
694 |
gactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtggga---tttctccaat |
790 |
Q |
| |
|
||||| || |||| | |||||| |||||||||||||||| ||| ||||||||||||||||| ||| |||| ||||| ||| || ||||| |
|
|
| T |
35429965 |
gactggtgcttctaaaaa--caaagaaactaggttcaatatatagtcttggtcttccccttgcttcactaaaataagcgatgtcggacataatcaccaat |
35430062 |
T |
|
| Q |
791 |
aactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
35430063 |
aactaatattttctaacctccttctttattcaagaaacttgacaatcaa |
35430111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 448 - 839
Target Start/End: Original strand, 7400279 - 7400672
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgtt |
546 |
Q |
| |
|
||||| ||||||| ||||| |||||||||||| ||| |||||| ||| |||||| |||||||||||||| |||| ||||||||||||| || | || |
|
|
| T |
7400279 |
tgttaggaaataaaagggccgaagaagaaaaaataaatacaatcacaacataagaatataatgtggaaactctaaaacgggagaaaaaaccatgaccatt |
7400378 |
T |
|
| Q |
547 |
gtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctca-ctctcacct-aatgctccaggataaccacaccct |
644 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||| ||||| | |||| || ||||| || |||||| | ||||||||| ||||| ||| | || ||||| || |
|
|
| T |
7400379 |
gtctaaaccgacaactaaaga-ttattactaggtgaatttttttacaatacatggacttctcttaactctcacctcaatgccccaatacaatcacactct |
7400477 |
T |
|
| Q |
645 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
744 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||| | || | |||| | ||||||||||||||||||||||| ||| |
|
|
| T |
7400478 |
cacaaaacaaatatttaaactaagtcagatataagcttaaagtgctactgaccggtgcatctaaaaa--caaagaacctaggttcaatatatagtcttgg |
7400575 |
T |
|
| Q |
745 |
tcttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||||| ||| |||||||| ||||| ||| || ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
7400576 |
tcttccccttgctccactaaactaagcgatgtcggacataatcaccaataactaata-tttttaacctctttctttattcaagaaacttgacaatcaa |
7400672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 537 - 839
Target Start/End: Original strand, 30921521 - 30921819
Alignment:
| Q |
537 |
cacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacc-taatgctccaggataa |
635 |
Q |
| |
|
||||| |||||| |||||||||| | ||||| ||||||||||||||||| |||| || ||||||| |||||||||||||||| ||||| | || | || |
|
|
| T |
30921521 |
cacgaccgttgtttaaaccgacaacaagagaattattactatgtgaaattttttccaacacatagacttctctcactctcaccctaatgacctagtacaa |
30921620 |
T |
|
| Q |
636 |
ccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatata |
735 |
Q |
| |
|
|||| | |||||||| ||| |||||||||||| | |||||||||||||||||| || || || |||| |||| | |||||||||| || ||||||| |
|
|
| T |
30921621 |
ccacgctctcacaaagcaattatttaaactaacttagatataagtttaaagtgctaatg--tg-tgtatctaaaaaac-aaagaacctacgtccaatata |
30921716 |
T |
|
| Q |
736 |
tatcattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaa |
835 |
Q |
| |
|
|| ||||| ||||||| ||| || |||| |||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30921717 |
taacattggtcttccctttgttttaccacactaagtgatgtgggacttctccaatatctaatgttttta-acctccttctttattcaagaaacttgacaa |
30921815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 531 - 839
Target Start/End: Original strand, 35428219 - 35428529
Alignment:
| Q |
531 |
aaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccag |
630 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||| |||||||||||||||| | || || ||||||| |||||| ||||| ||| ||| | | || |
|
|
| T |
35428219 |
aaaaaccacgaccgttgtctaaaccgacaaccagagaattattactatgtgaaaattgttacaacacatagacttctctaactctgacccaataccctag |
35428318 |
T |
|
| Q |
631 |
gataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaa---cctaggt |
727 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||| || | |||| | |||||| |||||| |
|
|
| T |
35428319 |
tacacccacaacctcacaaaacaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaattactaggt |
35428416 |
T |
|
| Q |
728 |
tcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaag |
824 |
Q |
| |
|
|||||||||| | ||| ||||||| ||||||||| ||| |||| ||| ||||| || ||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
35428417 |
tcaatatatagccttggtcttcccattgcttcactaaaataagcgatttgggacataatcaccaataactaatattttctaacctccttctttattca-- |
35428514 |
T |
|
| Q |
825 |
aaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
35428515 |
aaacttgacaatcaa |
35428529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 644 - 839
Target Start/End: Complemental strand, 18009307 - 18009114
Alignment:
| Q |
644 |
tcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattg |
743 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||| || |||||| || | ||||| | || ||| |||||| ||||||||| | ||| |
|
|
| T |
18009307 |
tcacaaagaaaatatttaaactaagtcaaatataagtttaaagtgctactgactggtgcatttaaaaac--aacgaatctaggtccaatatataaccttg |
18009210 |
T |
|
| Q |
744 |
atcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||| || ||| ||||||| |||||| || ||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
18009209 |
atctttccgttgtttcaccacactaagcgacttgggacttctccaatagctaatattttttaacctccttctttatttaagaaacttgacaatcaa |
18009114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 13661760 - 13661633
Alignment:
| Q |
715 |
aaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggattt---ctccaataactaatattttttcacctcc |
811 |
Q |
| |
|
|||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||| ||||||| | | | | ||||||||||||||||| |||||| |
|
|
| T |
13661760 |
aaagaaccaaagttcaatatataacattggtcttccccttgcttcactaaactaagcgatgtggaacataatcactaataactaatattttttaacctcc |
13661661 |
T |
|
| Q |
812 |
ttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
13661660 |
ttctttattcaagaaacttgacaatcaa |
13661633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 7659014 - 7658889
Alignment:
| Q |
715 |
aaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctcc-tt |
813 |
Q |
| |
|
|||||||||| ||||||||||| ||||| ||||| |||||| ||||| |||||| ||||| ||| ||||||||||||||||||||||| |||||| || |
|
|
| T |
7659014 |
aaagaacctaaattcaatatatagcattggtcttcgtcttgctccaccacactaagcgatgtaggacttctccaataactaatattttttaacctccttt |
7658915 |
T |
|
| Q |
814 |
ctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
| ||||| || ||||||||||||||| |
|
|
| T |
7658914 |
ccttatttaaaaaacttgacaatcaa |
7658889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 584
Target Start/End: Complemental strand, 18009382 - 18009313
Alignment:
| Q |
517 |
tccaaaatcggagaaaaaaccacgatcgttg--tctaaaccgacagctagagagttattactatgtgaaa |
584 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| |||||||||||| | ||| | |||||||||||||||| |
|
|
| T |
18009382 |
tccaaaattggagaaaaaaccacgagcgttgtctctaaaccgacaaccagataattattactatgtgaaa |
18009313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 2e-70; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 448 - 839
Target Start/End: Original strand, 5448673 - 5449067
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattac-acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
545 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| ||| | |||||| | |||||||| ||||||||||||||||||| || ||||||||||| || ||| |
|
|
| T |
5448673 |
tgttaggaaataacagggttgaagaagaaaaaataaacacaatcacaaatacaagaatataatgtggaaactccaaaaccgtagaaaaaaccatgaccgt |
5448772 |
T |
|
| Q |
546 |
tgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
645 |
Q |
| |
|
|||||||||||||| | ||||| |||| |||||||||||| |||| || ||||||| |||| ||||||||||| ||||| |||| | | |||||| ||| |
|
|
| T |
5448773 |
tgtctaaaccgacaaccagagaattatcactatgtgaaattttttacaacacatagacttctatcactctcacccaatgccccagtacacccacactctc |
5448872 |
T |
|
| Q |
646 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgat |
745 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||||| || |||||| || | |||| | |||||| |||||||||||||||| ||||| | |
|
|
| T |
5448873 |
acaaagaaaatatttaaactaagttagatataagcttaaagtgctactgactggtgcatctaaaaa--caaagaaactaggttcaatatatagcattggt |
5448970 |
T |
|
| Q |
746 |
cttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || |||||| |||||||||| | || ||||| ||||||||||||||||||||||||| |
|
|
| T |
5448971 |
attccccttgcttcactaaactaagcgatgtggaacataatcaccaatagctaatattttctaacatccttttttattcaagaaacttgacaatcaa |
5449067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 448 - 839
Target Start/End: Original strand, 5439663 - 5440057
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaa-taagcgcaatcattac-acaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgt |
545 |
Q |
| |
|
||||| |||||||||||| ||||||||||||| ||| | |||||| | |||||||| ||| ||||||||||||||| || ||||||||||| || ||| |
|
|
| T |
5439663 |
tgttaggaaataacagggttgaagaagaaaaaataaacacaatcacaaatacaagaatataacgtggaaactccaaaaccgtagaaaaaaccatgaccgt |
5439762 |
T |
|
| Q |
546 |
tgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctc |
645 |
Q |
| |
|
|||||||||||||| | ||||| |||| |||||||||||| |||| || ||||||| |||| ||||||||||| ||||| |||| | | |||||| ||| |
|
|
| T |
5439763 |
tgtctaaaccgacaaccagagaattatcactatgtgaaattttttacaacacatagacttctatcactctcacccaatgccccagtacatccacactctc |
5439862 |
T |
|
| Q |
646 |
acaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgat |
745 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||| |||||||| || |||||| || | |||| | ||| || |||||||||||||||| ||||| | |
|
|
| T |
5439863 |
acaaagaaaatatttaaactgagttagatataagcttaaagtgctactgactggtgcatctaaaaa--caaataaactaggttcaatatatagcattggt |
5439960 |
T |
|
| Q |
746 |
cttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || |||||| |||||||||| | || ||||| ||||||||||||||||||||||||| |
|
|
| T |
5439961 |
attccccttgcttcactaaactaagcgatgtggaacataatcaccaatagctaatattttctaacatccttttttattcaagaaacttgacaatcaa |
5440057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 454 - 839
Target Start/End: Original strand, 15589605 - 15589992
Alignment:
| Q |
454 |
gaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaa |
553 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||||||| ||||||||| ||| |||||||||||||| || ||||||| ||| || |||| |||||| |
|
|
| T |
15589605 |
gaaataacatggctaaagaagaaaaataagcacaatcattgcacaagaatataacttggaaactccaaaaccgaagaaaaacccatgaccgttttctaaa |
15589704 |
T |
|
| Q |
554 |
ccgacagctagagagttattactatgtgaaatgttttgcagtacata--gatttctctcactctcac-ctaatgctccaggataaccacaccctcacaaa |
650 |
Q |
| |
|
|||||| | ||||| || |||||||||||||| |||| || ||| | || ||||||||||||||| | ||| | |||| | ||||| || | |||| |
|
|
| T |
15589705 |
ccgacaaccagagaattgttactatgtgaaattttttacataacacatggaattctctcactctcacgccaattccccagtacaaccatactgacccaaa |
15589804 |
T |
|
| Q |
651 |
acaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttcc |
750 |
Q |
| |
|
|||||||| || |||||| ||||||||| |||| ||| || |||| || | |||||| ||||||||||| ||||||||||| | ||| |||||| |
|
|
| T |
15589805 |
gcaaatattgaacctaagtaagatataagcttaatgtgctactgacctgtgcatctaaatac--aaagaacctagattcaatatatagccttggtcttcc |
15589902 |
T |
|
| Q |
751 |
ccttgcttcaccaaactaagggatgtgggatttctcc-aataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||||||||||| || ||| || |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
15589903 |
ccttgcttcaccaaactaagtgacgtgtgacttctcccaataactaatattttttaacctccttctttattcaagaaatttgacaatcaa |
15589992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 838
Target Start/End: Original strand, 15588584 - 15588856
Alignment:
| Q |
563 |
agagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatattta |
661 |
Q |
| |
|
||||| ||||||||||| |||| |||| || ||||||| |||||||||||| ||| ||||| |||| | ||||| || ||||||||||||||||||| |
|
|
| T |
15588584 |
agagaattattactatg--aaattttttacaacacatagacttctctcactcttaccccaatgccccagtacaaccaaactctcacaaaacaaatattta |
15588681 |
T |
|
| Q |
662 |
aactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcac |
761 |
Q |
| |
|
|||||||||| ||||||| |||| ||| || |||| | || | |||| | ||||||| || |||||||||| | ||| |||||| |||||||||| |
|
|
| T |
15588682 |
aactaagtcaaatataagcttaacgtgctactgacaggtgcatctaaaaac--aaagaacgtaccatcaatatatagccttggtcttcctcttgcttcac |
15588779 |
T |
|
| Q |
762 |
caaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatca |
838 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
15588780 |
caaactaagtgatgtgggacttctccaataactaatattttgtaacctccttctttattcaagaaacttgacaatca |
15588856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 448 - 698
Target Start/End: Original strand, 5447676 - 5447932
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaa---taagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatc |
543 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| | |||||| | ||||||||| |||||||||||||| |||| |||||||||||| || | | |
|
|
| T |
5447676 |
tgttaggaaataacagggctgaagaagaaaaaaaataaacacaatcacaaacacaagaatataatgtggaaactctaaaaccggagaaaaaactactacc |
5447775 |
T |
|
| Q |
544 |
gttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct--aatgctccaggataaccacac |
641 |
Q |
| |
|
||||||||||||||| | ||||| |||| |||||||||| | |||| || ||||||| |||||||||||||||| || || |||| | | |||||| |
|
|
| T |
5447776 |
attgtctaaaccgacaaccagagaattatcactatgtgaatttttttacaacacatagacttctctcactctcaccccaaacgccccagtacacccacac |
5447875 |
T |
|
| Q |
642 |
cctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
698 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| |
|
|
| T |
5447876 |
tctcacaaaacaaatatttaaactaagttatatataagcttaaagtgctattgactg |
5447932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 698
Target Start/End: Original strand, 5438750 - 5438922
Alignment:
| Q |
528 |
agaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacct--aatgc |
625 |
Q |
| |
|
||||||||| || | | ||||||||||||||| | ||||| |||| ||||| |||| | |||| || ||||||| |||||||||||||||| || || |
|
|
| T |
5438750 |
agaaaaaactactaccattgtctaaaccgacaaccagagaattatcactatctgaatttttttacaacacatagacttctctcactctcaccccaaacgc |
5438849 |
T |
|
| Q |
626 |
tccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
698 |
Q |
| |
|
|||| | | |||||| ||||||||||||||||||||||||||| | ||||||| |||||||| || |||||| |
|
|
| T |
5438850 |
cccagtacacccacactctcacaaaacaaatatttaaactaagttatatataagcttaaagtgctattgactg |
5438922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Complemental strand, 25078455 - 25078408
Alignment:
| Q |
505 |
taatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
552 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
25078455 |
taatgtggaaactccaaagcaggagaaaaaaccacgatagttgtctaa |
25078408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 445 - 515
Target Start/End: Original strand, 15588508 - 15588578
Alignment:
| Q |
445 |
taatgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaa |
515 |
Q |
| |
|
|||||||| ||||||| |||||| || |||||||||||| |||||| |||||||||| ||| ||||||| |
|
|
| T |
15588508 |
taatgttaggaaataagagggctaaaatagaaaaataagcacaatcacaacacaagaatataacgtggaaa |
15588578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 123; Significance: 1e-62; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 448 - 839
Target Start/End: Complemental strand, 52022435 - 52022041
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||| |||||| ||||||| || ||| ||||||||||||||| || || |||||||| || | ||| |
|
|
| T |
52022435 |
tgttaggaaataatagggttgaagaagaaaaataagcacaatcacaacacaaggatataacgtggaaactccaaaaccgaag-aaaaaccatgaccattg |
52022337 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctc--ca-ggataaccacaccc |
643 |
Q |
| |
|
|||||||||||| | ||| | |||||| |||||||||| |||| || ||||||| |||||||||||||| || ||||| | || | | |||||||| | |
|
|
| T |
52022336 |
tctaaaccgacaaccagaaaattattattatgtgaaatcttttacaacacatagacttctctcactctcatcccaatgcccggcacgcacaaccacactc |
52022237 |
T |
|
| Q |
644 |
tcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattg |
743 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||| || |||||| || | |||| | |||||| |||||||||||||||| | ||| |
|
|
| T |
52022236 |
tcacaaaacaaatatttaaactaagtcagatatgagcttaaagtgctaatgactggtgcatctaaaaa--caaagaaactaggttcaatatatagccttg |
52022139 |
T |
|
| Q |
744 |
atcttccccttgcttcaccaaactaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||| || ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
52022138 |
gtcttccccttacttcactaaactaagcaatgtgggacataatcaccaataactaata-tttttaacctccttccttattcaagaaacttgacaatcaa |
52022041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 448 - 698
Target Start/End: Complemental strand, 6138503 - 6138253
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| | |||||| |||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
6138503 |
tgttaggaaataacagggctgaagaagaaaaatatacacaatcacaacacaagaatataacgtggaaactccaaaactagagaaaaaaccacgaccgttg |
6138404 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaatgctccaggataaccacaccctcac |
647 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||||||| | || || ||||||| |||||| ||||||||| ||||| ||| | | |||||| ||||| |
|
|
| T |
6138403 |
tctaaaccgacaaccagagaattattactatgtgaaaattgttacaccacatagacttctctaactctcacccaatgccccaatacacccacactctcac |
6138304 |
T |
|
| Q |
648 |
aaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactg |
698 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
6138303 |
aaagcaaatatttaaactaagtcagatataagcttaaagtgctactgactg |
6138253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 494 - 839
Target Start/End: Complemental strand, 6140078 - 6139732
Alignment:
| Q |
494 |
acacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgca |
593 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||| ||||||||| ||||| | |||||||| ||||| ||| ||| |||||||||||||||| | || || |
|
|
| T |
6140078 |
acacaagaatataacgtgaaaactccaaaatcagagaaaaaattacgattgctgtctaaatcgacaactaaagaattattactatgtgaaaattgttaca |
6139979 |
T |
|
| Q |
594 |
gtacatagatttctctcactctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagt |
693 |
Q |
| |
|
|||||||| |||||| |||||||||||||| |||| | | |||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| | |
|
|
| T |
6139978 |
atacatagacttctctaactctcacctaatgtcccagtacacccacactctcacaaagcaaatatttaaactaagttagatataagcttaaagtgttatt |
6139879 |
T |
|
| Q |
694 |
gactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtggga---tttctccaat |
790 |
Q |
| |
|
||| | || | |||| | |||||| ||| |||||||||||| | ||| ||||||||||||||||| |||||||| | ||||| | || |||| |
|
|
| T |
6139878 |
gaccggtgcatctaaaaa--caaagaaactatgttcaatatatagccttggtcttccccttgcttcactaaactaagcggtgtggaacataatcatcaat |
6139781 |
T |
|
| Q |
791 |
aactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||| |||| | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
6139780 |
aactaattttttctaacctccttctttattcaaaaaacttgacaatcaa |
6139732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 570 - 839
Target Start/End: Original strand, 2595238 - 2595504
Alignment:
| Q |
570 |
tattactatgtgaaatgttttgcagtacatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaag |
668 |
Q |
| |
|
|||||||||||||| | |||| || ||||||| |||| |||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||||| |
|
|
| T |
2595238 |
tattactatgtgaatttttttacaacacatagacttctatcactctcaccttaatgctccaatacaaccacattcttacaaaacaaatatttaaactaag |
2595337 |
T |
|
| Q |
669 |
tcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaacta |
768 |
Q |
| |
|
||| ||||||| | |||| || |||| || | |||| | |||||||||| || |||||||| | | |||||||||| |||||||| |||| |
|
|
| T |
2595338 |
tcacatataagctcaaagcactactgacg--tgcatctaaaaac--aaagaacctaagtctaatatatagtctaggtcttccccttacttcaccacacta |
2595433 |
T |
|
| Q |
769 |
agggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|| ||||| ||| | |||||||| |||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
2595434 |
agtgatgtaggactcctccaatagctaatactttttaacctccttctttatataagaaacttgacaatcaa |
2595504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 514 - 688
Target Start/End: Original strand, 43635633 - 43635798
Alignment:
| Q |
514 |
aactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcact |
613 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||||||||| |||| || ||||| |||||||||| |
|
|
| T |
43635633 |
aactccaaaatctgagaaaaattcacgactgttgtctaaac-------tagagaattattactatgtgaaattttttacaacgtatagacttctctcact |
43635725 |
T |
|
| Q |
614 |
ctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtg |
688 |
Q |
| |
|
|||||||||||| ||| | |||||||| |||||||| ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
43635726 |
ctcacctaatgccccaatacaaccacactctcacaaatcaaatattt--atcaagtcagatataagtttaaagtg |
43635798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 454 - 584
Target Start/End: Original strand, 3742465 - 3742596
Alignment:
| Q |
454 |
gaaataacagggctgaagaag-aaaaataagcgcaatcatta-cacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtcta |
551 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||| | ||||||||| ||| ||| |||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
3742465 |
gaaataacagggctgaagaaggaaaaataaacacaatcacaaacacaagaatataacgtgaaaactcaaaaatcagagaaaaaaccacgaccgttgtcta |
3742564 |
T |
|
| Q |
552 |
aaccgacagctagagagttattactatgtgaaa |
584 |
Q |
| |
|
|||| ||| | | ||| |||||||||||||||| |
|
|
| T |
3742565 |
aacc-acaaccaaagaattattactatgtgaaa |
3742596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 634 - 701
Target Start/End: Complemental strand, 43835077 - 43835010
Alignment:
| Q |
634 |
aaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatg |
701 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||| |
|
|
| T |
43835077 |
aaccacactatcacaaaacaaatatttaaaccaagtcagatgtaagtttaaagtgctactgactgatg |
43835010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 786 - 839
Target Start/End: Complemental strand, 6138179 - 6138126
Alignment:
| Q |
786 |
ccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||| |||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
6138179 |
ccaataactaattttttctaacctccttctttattcaagaaacttgacaatcaa |
6138126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 453 - 691
Target Start/End: Complemental strand, 5397631 - 5397404
Alignment:
| Q |
453 |
agaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaa |
552 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||| |||||||||| ||| || |||||||||| | |||||||||||||| |||| |
|
|
| T |
5397631 |
agaaataacaaagctgaagaagaaaaataagcaaaatcacaacacaagaatataaagtaagaactccaaaactgaagaaaaaaccacgaccgtt------ |
5397538 |
T |
|
| Q |
553 |
accgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcac--ctaatgctccaggataaccacaccctcacaaa |
650 |
Q |
| |
|
||| ||||||| |||||| |||||| | |||| || ||||||| ||||||||||||||| | |||| || | |||||||| |||||||| |
|
|
| T |
5397537 |
----acaactagagaattatta---tgtgaatttttttacaacacatagacttctctcactctcacgcccaatgtcccggtgcaaccacactctcacaaa |
5397445 |
T |
|
| Q |
651 |
acaaatatttaaactaagtcagatataagtttaaagtgtta |
691 |
Q |
| |
|
| ||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
5397444 |
ataaatatttaaattaagttagatataagcttaaagtgtta |
5397404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 448 - 688
Target Start/End: Original strand, 7284417 - 7284658
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttg |
547 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||| |||||||||| ||| ||||||||| |||||| |||||||||| || |||||||| |
|
|
| T |
7284417 |
tgttaagaaataacagagctgaagaagaaaaataagcataatcataacacaagaatataacgtggaaacttcaaaattggagaaaaaatcatgatcgttg |
7284516 |
T |
|
| Q |
548 |
tctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctca-cctaatgctccaggataaccacaccctca |
646 |
Q |
| |
|
|||||||||||| | | ||| |||||||||||| | | |||| || ||||||| |||||||| ||||| || ||||| ||| | | | ||| |||| |
|
|
| T |
7284517 |
tctaaaccgacaaccaaagaattattactatgtaattttttttacaacacatagacttctctcattctcaccccaatgccccactacagcatcactctca |
7284616 |
T |
|
| Q |
647 |
caaaacaaatatttaaactaagtcagatataagtttaaagtg |
688 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7284617 |
caaaacaaatatttaaactaagtcagatataagtttaaagtg |
7284658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 569 - 839
Target Start/End: Original strand, 392240 - 392514
Alignment:
| Q |
569 |
ttattactatgtgaaatgttttgcagtacatagatttctctcactctcac---ctaatgctccaggataaccacaccctcacaaaacaaatatttaaact |
665 |
Q |
| |
|
|||| |||||||||||| |||| || ||||||| ||||||| | ||||| | ||||| ||| | |||||||| |||||||| |||||||||||||| |
|
|
| T |
392240 |
ttatcactatgtgaaattttttacaacacatagaattctctctcactcacaacccaatgccccaatacaaccacactctcacaaagcaaatatttaaact |
392339 |
T |
|
| Q |
666 |
aagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaa |
765 |
Q |
| |
|
|||||||||||||| |||||||| || | ||||||||| |||| | |||||| ||| |||||||||||| | ||| ||||||||||||||||| ||| |
|
|
| T |
392340 |
aagtcagatataagcttaaagtgctactaactgatgtatctaaaaa--caaagaaactacgttcaatatatagccttggtcttccccttgcttcactaaa |
392437 |
T |
|
| Q |
766 |
ctaagggatgtggga---tttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||| ||||||||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
392438 |
ctaagcgatgtgggacataatcaccaataactaatattttctaacctccttctttattcaagaaacttgacaatcaa |
392514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 509 - 839
Target Start/End: Original strand, 7277926 - 7278255
Alignment:
| Q |
509 |
gtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctc |
608 |
Q |
| |
|
||||||||| |||| ||| |||||||||||| ||||||||||||||||| | ||| | | ||||||||| || | |||| || ||||||| ||||| |
|
|
| T |
7277926 |
gtggaaactttaaaactggataaaaaaccacgaccgttgtctaaaccgacaaccagaaaatgattactatgggattttttttacaacacatagacttctc |
7278025 |
T |
|
| Q |
609 |
tcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagtta |
707 |
Q |
| |
|
||||||||||| |||||||||| | || || || |||||||| |||||||||||||||||||||||||||| |||||||| || |||||| || | || |
|
|
| T |
7278026 |
tcactctcaccccaatgctccagtacaatcatactctcacaaagcaaatatttaaactaagtcagatataagcttaaagtgctactgactggtgcatcta |
7278125 |
T |
|
| Q |
708 |
aatatttaaagaacctaggttcaatatata-tcattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttca |
806 |
Q |
| |
|
| | ||||||||||||| ||||||||| ||| || || |||| ||||||||||| |||||| ||||| ||| || ||||||| | |||||||||| | |
|
|
| T |
7278126 |
caaa--caaagaacctaggtccaatatatagtca-tggtcctcccattgcttcaccacactaagcgatgtaggacttttccaatagcaaatattttttaa |
7278222 |
T |
|
| Q |
807 |
cctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| |
|
|
| T |
7278223 |
cctccttatttatttaagaaacttgacaatcaa |
7278255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 467 - 668
Target Start/End: Complemental strand, 3581699 - 3581496
Alignment:
| Q |
467 |
tgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcggag-aaaaaaccacgatcgttgtctaaaccgacagctaga |
565 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||||||| || |||||| |||||| |||| |||||||||||||||| ||||||||||||| | | | |
|
|
| T |
3581699 |
tgaagaagaaaaataagcacaatctcaacacaataatgtaacgtagaaacttcaaaattggagaaaaaaaccacgatcgtcgtctaaaccgacaaccaaa |
3581600 |
T |
|
| Q |
566 |
gagttattactatgtgaaatgttttgcagtacatagatttctctcactc-tcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaac |
664 |
Q |
| |
|
|| || ||| |||||||| |||| || ||||||| || |||||||| | || ||||| || | |||||||| |||||||| |||||||||||| |
|
|
| T |
3581599 |
gaattgttattatgtgaagatttttacaacacatagacttatctcactcaccccccaatgccccgatacaaccacactctcacaaagaaaatatttaaac |
3581500 |
T |
|
| Q |
665 |
taag |
668 |
Q |
| |
|
|||| |
|
|
| T |
3581499 |
taag |
3581496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 750 - 839
Target Start/End: Complemental strand, 3581425 - 3581336
Alignment:
| Q |
750 |
cccttgcttcaccaaactaagggatgtgggatttctccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||| |||| |||| | ||||| || |||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
3581425 |
cccttgcttaaccacactatgaaatgtgagacttctcccatagctaatattttttaacctccttctttatttaagaaacttgacaatcaa |
3581336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 97; Significance: 3e-47; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 448 - 755
Target Start/End: Complemental strand, 14509036 - 14508729
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgta--atgtggaaactccaaaatcggagaaaaaaccacgatcgt |
545 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| || | ||||||||||||||| | |||||||||| | | ||| |
|
|
| T |
14509036 |
tgttaggaaataacagggctgaagaagaaaaataaacacaatcacaacacaagaatatataacgtggaaactccaaaaccagagaaaaaacg-caaccgt |
14508938 |
T |
|
| Q |
546 |
tgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctcactctcacctaat-gctccaggataaccacaccct |
644 |
Q |
| |
|
|||||||||||||| | | ||| ||||||||||||||| | |||| || ||||||| |||||||||||||||| || || | || | |||||||| || |
|
|
| T |
14508937 |
tgtctaaaccgacaaccaaagaattattactatgtgaatttttttacaacacatagacttctctcactctcaccccatggccctagtacaaccacactct |
14508838 |
T |
|
| Q |
645 |
cacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcattga |
744 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||| |||||||| || |||||| | | |||| | | |||||||||||||||||||||| | ||| |
|
|
| T |
14508837 |
cacaaagcaaatatttaaactaggtcagatataagcttaaagtgctactgactggtacatctaaaaact--aagaacctaggttcaatatatagccttgg |
14508740 |
T |
|
| Q |
745 |
tcttccccttg |
755 |
Q |
| |
|
||||||||||| |
|
|
| T |
14508739 |
tcttccccttg |
14508729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 598 - 839
Target Start/End: Complemental strand, 31322734 - 31322493
Alignment:
| Q |
598 |
atagatttctctcactctcacct--aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtga |
695 |
Q |
| |
|
||||| || ||||||||||||| ||||| |||| | |||||| | | |||||| ||||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
31322734 |
atagacttttctcactctcaccccaaatgccccagcacaaccactctcccacaaagaaaatatttaaactaagtcagatataagcttaaagtgccattga |
31322635 |
T |
|
| Q |
696 |
ctgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggatttctccaataacta |
795 |
Q |
| |
|
|| || | |||| | ||||||||||||| ||||||||| | ||| |||||| ||| |||||||| |||||| ||||| || |||||||||| ||| |
|
|
| T |
31322634 |
atggtgcatctaaaaac--aaagaacctaggtccaatatataaccttggtcttcctcttacttcaccacactaagtaatgtgagacttctccaatatcta |
31322537 |
T |
|
| Q |
796 |
atattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||||||||||||| |
|
|
| T |
31322536 |
atatttttaaacctccttctttaattaagaaacttgacaatcaa |
31322493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 596 - 839
Target Start/End: Original strand, 41848305 - 41848548
Alignment:
| Q |
596 |
acatagatttctctcactctcacct-aatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtg |
694 |
Q |
| |
|
||||||| |||||||||||| || |||| ||||| | |||||||| ||| |||||||||||||||||||| ||||||||||| | ||| || || || |
|
|
| T |
41848305 |
acatagacttctctcactctagccccaatgttccagtacaaccacactttcataaaacaaatatttaaactaaatcagatataagctaaaaatgctactg |
41848404 |
T |
|
| Q |
695 |
actgatgtagttaaatatttaaagaacctaggttcaatatatatcattgatctt-ccccttgcttcaccaaactaagggatgtgggatttctccaataac |
793 |
Q |
| |
|
||||||| | |||| | |||||||| | || |||||||| ||||| | || ||||||||||||||| |||||| | ||| | |||||||||| | |
|
|
| T |
41848405 |
actgatgcatctaaaaac--aaagaaccaaagtcgaatatatagcattggtttttccccttgcttcaccacactaagcggtgtttaacttctccaatagc |
41848502 |
T |
|
| Q |
794 |
taatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| |||||||| |
|
|
| T |
41848503 |
taatattttttaacctccttctttatttaagaaacttaacaatcaa |
41848548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 513 - 735
Target Start/End: Original strand, 10549908 - 10550115
Alignment:
| Q |
513 |
aaactccaaaatcggagaaaaaa-ccacgatcgttgtctaaaccgacagctagagagttattactatgtgaaatgttttgcagtacatagatttctctca |
611 |
Q |
| |
|
||||| |||||||| |||||||| |||||| ||||||||| ||||||| ||||||| ||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
10549908 |
aaacttcaaaatcgaagaaaaaaaccacgaccgttgtctataccgacaactagagaattattactatgtgaaatttttt---------agacttctctca |
10549998 |
T |
|
| Q |
612 |
ctctcacctaatgctccaggataaccacaccctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaata |
711 |
Q |
| |
|
| || |||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| || |||||| || | |||| | |
|
|
| T |
10549999 |
c-----ccaaatgctccagtacaaccacactctcacaaaacaaatatttaaactgagtcagatataaacttaaagtgctactgactggtgcatctaaaaa |
10550093 |
T |
|
| Q |
712 |
tttaaagaacctaggttcaatata |
735 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10550094 |
--caaagaacctaggttcaatata |
10550115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 643 - 839
Target Start/End: Complemental strand, 31327314 - 31327119
Alignment:
| Q |
643 |
ctcacaaaacaaatatttaaactaagtcagatataagtttaaagtgttagtgactgatgtagttaaatatttaaagaacctaggttcaatatatatcatt |
742 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||| |||||||| || | |||| |||| |||| || | |||||||||||| |||||||| |||| |
|
|
| T |
31327314 |
ctcataaaataaatatttaaattaagtcagatataaacttaaagtgctacttactggtgtatataaaaat--agagaacctaggttgaatatatagcatt |
31327217 |
T |
|
| Q |
743 |
gatcttccccttgcttcaccaaactaagggatgtgggatttctccaataactaatatt-ttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
| |||| || ||||||||||| |||||| ||| |||| |||||||||| ||||||| |||| | |||||| |||||| |||||| ||||||||||| |
|
|
| T |
31327216 |
ggtctttcctttgcttcaccacactaagcaatgcgggacttctccaataggtaatatttttttaatctccttttttatttaagaaatttgacaatcaa |
31327119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 715 - 839
Target Start/End: Original strand, 45676696 - 45676822
Alignment:
| Q |
715 |
aaagaacctaggttcaatatatatcattgatcttccccttgcttcaccaaactaagggatgtgggattt---ctccaataactaatattttttcacctcc |
811 |
Q |
| |
|
||||||||||||||||||||||| || ||| |||||||||||| |||||||| ||||| ||| | | |||||| ||||||||||| |||||| |
|
|
| T |
45676696 |
aaagaacctaggttcaatatatagtcttagcctttcccttgcttcactaaactaagcgatgtaggacataatcaccaatagctaatattttta-acctcc |
45676794 |
T |
|
| Q |
812 |
ttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
45676795 |
ttctttattcaagaaacttgacaatcaa |
45676822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 447 - 558
Target Start/End: Original strand, 45676539 - 45676653
Alignment:
| Q |
447 |
atgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaatgtaatgtggaaactccaaaatcg---gagaaaaaaccacgatc |
543 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||| | |||| || |||||||||| ||| ||||||| | ||||| | || |||||||||||| | |
|
|
| T |
45676539 |
atgttaggaaataacagggttgaagaagaaaaataaacacaattataacacaagaatataacgtggaaaatttaaaattggaagaaaaaaaaccacgacc |
45676638 |
T |
|
| Q |
544 |
gttgtctaaaccgac |
558 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
45676639 |
gttgtctaaaccgac |
45676653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 786 - 839
Target Start/End: Original strand, 10550139 - 10550192
Alignment:
| Q |
786 |
ccaataactaatattttttcacctccttctttattcaagaaacttgacaatcaa |
839 |
Q |
| |
|
|||||||||||| |||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
10550139 |
ccaataactaatgttttttaacctcattctttattcaagaaacttgacaatcaa |
10550192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 462 - 554
Target Start/End: Complemental strand, 31322915 - 31322818
Alignment:
| Q |
462 |
agggctgaagaagaaaaataagcgcaatcattacacaa------gaatgtaatgtggaaactccaaaatcggagaaaaaaccacgatcgttgtctaaac |
554 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| |||| ||| |||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
31322915 |
agggctgaagaagaaaaataagcacaatcacaacacaaaaacaagaatataacgtggaaactccaaaatcggaga-aaaaccacgactgttgtctaaac |
31322818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 8445751 - 8445696
Alignment:
| Q |
448 |
tgttaagaaataacagggctgaagaagaaaaataagcgcaatcattacacaagaat |
503 |
Q |
| |
|
||||| |||| |||||||||| ||||||||||||| | |||||| ||||||||||| |
|
|
| T |
8445751 |
tgttaggaaacaacagggctgcagaagaaaaataaacacaatcactacacaagaat |
8445696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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