View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2961R-Insertion-5 (Length: 810)

Name: NF2961R-Insertion-5
Description: NF2961R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2961R-Insertion-5
NF2961R-Insertion-5
[»] chr4 (35 HSPs)
chr4 (9-281)||(46744704-46744966)
chr4 (334-743)||(46745019-46745422)
chr4 (514-584)||(39595927-39595997)
chr4 (677-715)||(19124640-19124678)
chr4 (660-717)||(11144666-11144723)
chr4 (507-584)||(19479467-19479544)
chr4 (527-583)||(16067912-16067968)
chr4 (507-559)||(23809943-23809995)
chr4 (507-583)||(24664982-24665058)
chr4 (507-571)||(51002281-51002345)
chr4 (662-726)||(51298699-51298763)
chr4 (507-559)||(56564998-56565050)
chr4 (513-572)||(3936627-3936686)
chr4 (677-715)||(7371566-7371604)
chr4 (537-583)||(19908716-19908762)
chr4 (507-581)||(35021460-35021534)
chr4 (506-568)||(35287513-35287575)
chr4 (677-715)||(40847085-40847123)
chr4 (674-715)||(6094192-6094233)
chr4 (506-559)||(19588147-19588200)
chr4 (670-715)||(20098766-20098811)
chr4 (507-584)||(22630350-22630427)
chr4 (666-715)||(24063215-24063264)
chr4 (506-583)||(32180823-32180900)
chr4 (507-564)||(36203230-36203287)
chr4 (511-568)||(40070974-40071031)
chr4 (506-583)||(41520947-41521024)
chr4 (507-568)||(42344624-42344685)
chr4 (507-568)||(43034348-43034409)
chr4 (506-559)||(43374287-43374340)
chr4 (508-557)||(45970724-45970773)
chr4 (507-572)||(51436608-51436673)
chr4 (660-705)||(54103308-54103353)
chr4 (510-583)||(54500566-54500639)
chr4 (507-568)||(54857621-54857682)
[»] chr5 (34 HSPs)
chr5 (513-583)||(1538799-1538869)
chr5 (509-584)||(5107235-5107310)
chr5 (652-717)||(12285595-12285660)
chr5 (507-568)||(40715955-40716016)
chr5 (507-583)||(37932324-37932400)
chr5 (677-715)||(5001560-5001598)
chr5 (677-715)||(31159434-31159472)
chr5 (510-583)||(8544980-8545053)
chr5 (507-584)||(11637562-11637639)
chr5 (681-718)||(32460013-32460050)
chr5 (507-568)||(42473888-42473949)
chr5 (507-559)||(18589882-18589934)
chr5 (507-567)||(19759923-19759983)
chr5 (507-571)||(28207126-28207190)
chr5 (511-583)||(36170053-36170125)
chr5 (507-583)||(37791154-37791230)
chr5 (651-715)||(39610333-39610397)
chr5 (512-583)||(16579365-16579436)
chr5 (513-572)||(43406680-43406739)
chr5 (518-568)||(5246162-5246212)
chr5 (505-559)||(13796322-13796376)
chr5 (677-715)||(19783653-19783691)
chr5 (510-584)||(27903110-27903184)
chr5 (505-571)||(35109392-35109458)
chr5 (677-715)||(35109405-35109443)
chr5 (511-573)||(37614428-37614490)
chr5 (507-572)||(6624770-6624835)
chr5 (510-583)||(13864341-13864414)
chr5 (507-556)||(19248473-19248522)
chr5 (507-568)||(21594392-21594453)
chr5 (507-568)||(21598509-21598570)
chr5 (528-573)||(25709748-25709793)
chr5 (507-568)||(30893927-30893988)
chr5 (506-559)||(42659570-42659623)
[»] chr2 (25 HSPs)
chr2 (515-567)||(6228636-6228688)
chr2 (507-572)||(42475112-42475177)
chr2 (507-571)||(20455885-20455949)
chr2 (507-583)||(33063980-33064056)
chr2 (510-568)||(9519720-9519778)
chr2 (507-572)||(37320519-37320584)
chr2 (507-568)||(40295464-40295525)
chr2 (507-567)||(7206119-7206179)
chr2 (510-573)||(7121761-7121824)
chr2 (507-570)||(13196694-13196757)
chr2 (508-559)||(19967413-19967464)
chr2 (508-559)||(38904056-38904107)
chr2 (507-558)||(44694682-44694733)
chr2 (507-557)||(32204538-32204588)
chr2 (506-568)||(44026601-44026663)
chr2 (506-559)||(1861824-1861877)
chr2 (507-572)||(2256965-2257030)
chr2 (507-559)||(16082126-16082179)
chr2 (507-568)||(22523018-22523079)
chr2 (507-556)||(22571883-22571932)
chr2 (511-568)||(22608525-22608582)
chr2 (507-560)||(24548111-24548164)
chr2 (507-572)||(27411086-27411151)
chr2 (505-574)||(35727429-35727498)
chr2 (677-714)||(42200693-42200730)
[»] chr1 (22 HSPs)
chr1 (507-583)||(1091173-1091249)
chr1 (507-581)||(3693789-3693863)
chr1 (507-574)||(49222810-49222877)
chr1 (513-571)||(15382822-15382880)
chr1 (506-583)||(16967185-16967262)
chr1 (507-559)||(32950776-32950828)
chr1 (507-559)||(48681948-48682000)
chr1 (507-559)||(52441526-52441578)
chr1 (513-584)||(12522109-12522180)
chr1 (507-581)||(9527991-9528065)
chr1 (506-568)||(26755609-26755671)
chr1 (506-572)||(37050922-37050988)
chr1 (507-581)||(37705119-37705193)
chr1 (678-712)||(46082531-46082565)
chr1 (507-584)||(3431324-3431401)
chr1 (510-559)||(23915525-23915574)
chr1 (506-583)||(26010215-26010292)
chr1 (507-572)||(30795695-30795760)
chr1 (677-706)||(32021301-32021330)
chr1 (507-568)||(34632163-34632224)
chr1 (511-572)||(35442853-35442914)
chr1 (507-560)||(36467039-36467092)
[»] chr8 (32 HSPs)
chr8 (504-583)||(14279562-14279641)
chr8 (507-572)||(10732777-10732842)
chr8 (507-568)||(13357447-13357508)
chr8 (507-583)||(27718885-27718961)
chr8 (507-574)||(12700997-12701064)
chr8 (507-584)||(574378-574455)
chr8 (510-559)||(1877677-1877726)
chr8 (507-560)||(17062353-17062406)
chr8 (507-560)||(17585952-17586005)
chr8 (507-584)||(28436537-28436614)
chr8 (511-559)||(24687777-24687825)
chr8 (507-583)||(37872178-37872254)
chr8 (507-583)||(44293569-44293645)
chr8 (508-583)||(28084277-28084351)
chr8 (506-553)||(40316849-40316896)
chr8 (508-574)||(10152451-10152517)
chr8 (507-557)||(13286125-13286175)
chr8 (677-715)||(17062357-17062395)
chr8 (677-715)||(17585963-17586001)
chr8 (510-572)||(20469313-20469375)
chr8 (511-572)||(1764956-1765017)
chr8 (506-559)||(3456836-3456889)
chr8 (507-584)||(11708980-11709057)
chr8 (674-715)||(13394166-13394207)
chr8 (507-559)||(15310316-15310369)
chr8 (507-559)||(15490685-15490738)
chr8 (506-583)||(19163527-19163604)
chr8 (507-584)||(21557427-21557504)
chr8 (542-583)||(27050772-27050813)
chr8 (507-572)||(29499765-29499830)
chr8 (507-559)||(34997452-34997505)
chr8 (507-572)||(39433404-39433469)
[»] chr7 (22 HSPs)
chr7 (506-559)||(34934295-34934348)
chr7 (507-583)||(35142140-35142216)
chr7 (505-559)||(39706612-39706666)
chr7 (505-583)||(45046206-45046284)
chr7 (511-583)||(1285060-1285132)
chr7 (660-715)||(48007548-48007603)
chr7 (507-557)||(8683064-8683114)
chr7 (510-572)||(8879749-8879811)
chr7 (506-568)||(9893086-9893148)
chr7 (513-583)||(21105603-21105673)
chr7 (510-572)||(24099237-24099299)
chr7 (537-583)||(34773255-34773301)
chr7 (661-715)||(38911304-38911358)
chr7 (510-572)||(40875039-40875101)
chr7 (677-715)||(45979118-45979156)
chr7 (510-559)||(5458086-5458135)
chr7 (507-568)||(10244721-10244782)
chr7 (507-552)||(26825419-26825464)
chr7 (507-568)||(29726794-29726855)
chr7 (677-714)||(44106634-44106671)
chr7 (506-559)||(45088869-45088922)
chr7 (677-714)||(45425459-45425496)
[»] chr6 (21 HSPs)
chr6 (507-559)||(13496110-13496162)
chr6 (510-572)||(1918460-1918522)
chr6 (506-568)||(8809299-8809361)
chr6 (652-706)||(28046171-28046225)
chr6 (507-572)||(9111041-9111106)
chr6 (507-583)||(2445293-2445369)
chr6 (507-567)||(9392675-9392735)
chr6 (507-583)||(9665304-9665380)
chr6 (670-726)||(14679119-14679175)
chr6 (507-559)||(29335590-29335642)
chr6 (507-583)||(32053782-32053858)
chr6 (512-571)||(4450261-4450320)
chr6 (512-559)||(12904332-12904379)
chr6 (508-559)||(28951394-28951445)
chr6 (677-715)||(7081672-7081710)
chr6 (513-559)||(23635729-23635775)
chr6 (510-568)||(32193865-32193923)
chr6 (507-572)||(655751-655816)
chr6 (511-568)||(8629702-8629759)
chr6 (507-568)||(29740476-29740537)
chr6 (510-559)||(33938694-33938743)
[»] chr3 (24 HSPs)
chr3 (511-574)||(42074101-42074164)
chr3 (537-583)||(10440708-10440754)
chr3 (507-572)||(28244106-28244171)
chr3 (507-564)||(33223862-33223919)
chr3 (507-568)||(53162192-53162253)
chr3 (507-559)||(6835161-6835213)
chr3 (666-714)||(7824813-7824861)
chr3 (507-571)||(21331420-21331484)
chr3 (507-583)||(22722396-22722472)
chr3 (507-583)||(33633309-33633385)
chr3 (508-559)||(5428451-5428502)
chr3 (536-583)||(28430556-28430603)
chr3 (652-706)||(14741808-14741862)
chr3 (507-581)||(24348381-24348455)
chr3 (507-557)||(31138411-31138461)
chr3 (506-583)||(5941285-5941362)
chr3 (670-715)||(22462317-22462362)
chr3 (506-559)||(26768394-26768447)
chr3 (677-718)||(39438507-39438548)
chr3 (681-726)||(43352708-43352753)
chr3 (510-559)||(43490432-43490481)
chr3 (507-572)||(44579630-44579695)
chr3 (508-573)||(45309144-45309209)
chr3 (526-559)||(46093129-46093162)
[»] scaffold0008 (1 HSPs)
scaffold0008 (511-559)||(122889-122937)
[»] scaffold0041 (1 HSPs)
scaffold0041 (510-572)||(91181-91243)
[»] scaffold0160 (1 HSPs)
scaffold0160 (507-568)||(22905-22966)
[»] scaffold0122 (1 HSPs)
scaffold0122 (510-583)||(14177-14250)


Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 9 - 281
Target Start/End: Original strand, 46744704 - 46744966
Alignment:
Q  9 cttactaatgcaaacaatattgtcattttaatggattaaactcttattgattagttgagtcaacaggttgtttatcatatattcacgtgcctacattccc 108  Q
    ||||||||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46744704 cttactaatgcaaacaatattgtcattttaat---------tcttattgatcagttgagtcaacaggttgtttatcatatattcacgtgcctacattccc 46744794  T
Q  109 gtgatgatttgctgtagaatcatactctatcttgataagtcatttcaattagacataaaacaaatcataggggaaaaaggtatttaaataatgnnnnnnn 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            
T  46744795 gtgatgatttgctgtagaatcatactctatcttgataagtcatttcaattagacataaaacaaatcataggggaaaaaggtatttaaat-attttttttt 46744893  T
Q  209 naaagatgttatttactcatttcagtacgtacttgtatgaattatgcgtgaaaaacaaggacttgtatgaatt 281  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46744894 taaagatgttatttactcatttcagtacgtacttgtatgaattatgcgtgaaaaacaaggacttgtatgaatt 46744966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 334 - 743
Target Start/End: Original strand, 46745019 - 46745422
Alignment:
Q  334 gttgttttgtgttgctttccgtactgaaaatcattttaagaaacaaatcaattatnnnnnnnnnttattttttggatgagttattcaaaatttatcagan 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||     
T  46745019 gttgttttgtgttgctttccgtactgaaaatcattttaagaaacaaatcaattataaaaaaa--ttattttttggatgagttattcaaaatttatcagat 46745116  T
Q  434 nnnnnnnnnnnnnnnnagaaacaaaattttaataaatagaattttaaaatgtatactaattagttgagctgacgtcctcgtgagcttatctcaattgata 533  Q
                    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  46745117 ttttttttta------agaaacaaaattttaataaatagaattttaaaatgtatactaactagttgagctgacgtcctcgtgagcttatctcagttgata 46745210  T
Q  534 taaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccatnnnnnnnnnnnnnnttgagctgacacannnnnnnncataaggagttgag 633  Q
    |  |||| | |||||||||||||||||||||| |||||||||| |||||||              |||||||||||||        ||||||||||||||    
T  46745211 tggacaatgtataatatatgcaaggtacgaggatcgaactctggccaccattaaaaaaaaaatagttgagctgacacattttttttcataaggagttgag 46745310  T
Q  634 ctaacatac--nnnnnnnaagtgttcgaggttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaagtttgcggagacttgag 731  Q
    |||||||||         | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  46745311 ctaacatactttttttttaggtgttcgaggttcaaactccaaacattgcatatattatgcattgtttttatcaaccgagttaagtttgcggagacttgag 46745410  T
Q  732 ttgacacactta 743  Q
    ||||||||||||    
T  46745411 ttgacacactta 46745422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 514 - 584
Target Start/End: Complemental strand, 39595997 - 39595927
Alignment:
Q  514 tgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||||  ||||||| ||||| |||||||||    
T  39595997 tgagcttagctcaattgatataaataatacataatatatgcaaggtctgaggttcaaactccgaccaccat 39595927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 19124640 - 19124678
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19124640 ttgcatatattatgtattgtctttatcaactgagttaag 19124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 717
Target Start/End: Original strand, 11144666 - 11144723
Alignment:
Q  660 ggttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaagtt 717  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||||| ||| ||||||    
T  11144666 ggttcaaaccccagaccttgcatatattatgcattgtctttatcaactgaggtaagtt 11144723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 19479544 - 19479467
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||| ||||||||| |||| || |||| ||||| |||||||||||||||||| || ||||| ||| | |||||||||    
T  19479544 gtccttgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccat 19479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 527 - 583
Target Start/End: Complemental strand, 16067968 - 16067912
Alignment:
Q  527 attgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||| |||||  ||||| ||||||||||| |||||||||||||| ||||||||    
T  16067968 attgatatgaacaatacataaaatatgcaaggtccgaggttcgaactccgaccacca 16067912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 23809943 - 23809995
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||| |||  |||||||||||||||||||||||    
T  23809943 gtcctcgtgagcttagctcagttggtatggacaaagcataatatatgcaaggt 23809995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 24665058 - 24664982
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||| |||  | || |||||||||||||||||| || ||||||||| | ||||||||    
T  24665058 gtcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccacca 24664982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 51002281 - 51002345
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    ||||||||||||||| |||| ||| |||| |||| |||||| |||||||||||  ||||||||||    
T  51002281 gtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtttgaggttcgaa 51002345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 662 - 726
Target Start/End: Original strand, 51298699 - 51298763
Alignment:
Q  662 ttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaagtttgcggagac 726  Q
    ||||||| || ||| ||||||||||||| ||||||| |||||||| ||||||||||  |||||||    
T  51298699 ttcaaaccccgaaccttgcatatattatatattgtccttatcaactgagttaagttcacggagac 51298763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 56565050 - 56564998
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| ||||||||||||  |||| |||||| |||||||||||    
T  56565050 gtcctcgtgagcttagctcaattgatatggacaatgcataaaatatgcaaggt 56564998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 572
Target Start/End: Original strand, 3936627 - 3936686
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||| |||| ||| ||| ||||| |||||||||||||||||| || |||||||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaac 3936686  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 7371566 - 7371604
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  7371566 ttgcatatattatgtattgtccttatcaactgagttaag 7371604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 583
Target Start/End: Original strand, 19908716 - 19908762
Alignment:
Q  537 acaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||| |||||||||||||||||| |||||||||||| | ||||||||    
T  19908716 acaatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 19908762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 581
Target Start/End: Complemental strand, 35021534 - 35021460
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccac 581  Q
    ||||||||||||||| |||| |||||||  ||||  ||||| ||||||||||| || ||||||||| | ||||||    
T  35021534 gtcctcgtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggttcgaaccccgaccac 35021460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 35287575 - 35287513
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||| |||| ||| ||| ||||| |||||| ||||||||||| || |||||    
T  35287575 cgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttc 35287513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 40847085 - 40847123
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  40847085 ttgcatatattatgtattgtctctatcaactgagttaag 40847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 6094192 - 6094233
Alignment:
Q  674 acattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||| ||||||||||||||||| | ||||||||||||||||    
T  6094192 acattacatatattatgtattgtttctatcaaccgagttaag 6094233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Original strand, 19588147 - 19588200
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||||| |||||||| |||  |||| |||||| |||||||||||    
T  19588147 cgtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggt 19588200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 20098766 - 20098811
Alignment:
Q  670 ccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||    
T  20098766 ccaaacattgcatatattatgtattgtctctgccaactgagttaag 20098811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 22630427 - 22630350
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||| |||||||| ||| ||   |||| ||||||||||||||||||  ||||||| ||| | |||||||||    
T  22630427 gtcctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccat 22630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 715
Target Start/End: Original strand, 24063215 - 24063264
Alignment:
Q  666 aactccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||  |||||||||||||| ||||||| ||||||| ||||||||    
T  24063215 aactccaaatcttgcatatattatgcattgtctctatcaactgagttaag 24063264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 583
Target Start/End: Original strand, 32180823 - 32180900
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||||||| |||| ||| |||| |||| |||||| |||||||| ||  | ||||||||| | ||||||||    
T  32180823 cgtcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaaagtctggggttcgaaccccgaccacca 32180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 564
Target Start/End: Original strand, 36203230 - 36203287
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgag 564  Q
    ||||||||||||||| |||| ||||||   |||| |||||||||||||||||| ||||    
T  36203230 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccgag 36203287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 568
Target Start/End: Complemental strand, 40071031 - 40070974
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||| |||| ||| ||| ||||| |||||||||||||||||| ||| ||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttc 40070974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 583
Target Start/End: Original strand, 41520947 - 41521024
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||| | |||||| |||| ||| || | |||| |||||||||||||||||| | |||||| ||||| ||||||||    
T  41520947 cgtcctcataagcttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaactccgaccacca 41521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 42344685 - 42344624
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||| |||| |||||||| ||  ||||| | |||||||||||||||| ||||||||    
T  42344685 gtcctcgtgaccttaactcaattggtaggaacaatgtataatatatgcaaggtccgaggttc 42344624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 43034409 - 43034348
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||| |||  |||| ||||||||||||||||||  |||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttc 43034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 43374340 - 43374287
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||||| |||| |||||||  |||| |||||| |||||||||||    
T  43374340 cgtcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggt 43374287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 557
Target Start/End: Complemental strand, 45970773 - 45970724
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaag 557  Q
    |||||||||||||| |||| ||| || |||||| ||||||||||||||||    
T  45970773 tcctcgtgagcttaactcagttggtagaaacaatgcataatatatgcaag 45970724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 51436673 - 51436608
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||| |||| |||| ||||||  ||||| |||||||||||||||||| ||  ||||||||    
T  51436673 gtcctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggttcggagttcgaac 51436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 705
Target Start/End: Original strand, 54103308 - 54103353
Alignment:
Q  660 ggttcaaactccaaacattgcatatattatgtattgtctttatcaa 705  Q
    |||||||||| |||||||||||||||||||  ||||| ||||||||    
T  54103308 ggttcaaacttcaaacattgcatatattatacattgtttttatcaa 54103353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 583
Target Start/End: Original strand, 54500566 - 54500639
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||| |||| ||| || | |||| |||||||||||| ||||| || ||||| ||| ||||||||||    
T  54500566 ctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaacactgaccacca 54500639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 54857682 - 54857621
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||  ||| ||||||||| |||||| ||||||||||| || |||||    
T  54857682 gtcctcgtgagcttagctcggttggtataaacaatgcataaaatatgcaaggtccggggttc 54857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 583
Target Start/End: Complemental strand, 1538869 - 1538799
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||| ||| | ||||||||    
T  1538869 gtgagcttaactcaattggtataaacaacgcataatatatgcaaggtccgaggttcaaacgccgaccacca 1538799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 509 - 584
Target Start/End: Complemental strand, 5107310 - 5107235
Alignment:
Q  509 cctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||||| |||| ||| ||| || || |||||||||||||||||| |||||||||||| | |||||||||    
T  5107310 cctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccaccat 5107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 717
Target Start/End: Original strand, 12285595 - 12285660
Alignment:
Q  652 gtgttcgaggttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaagtt 717  Q
    |||||||  |||| || ||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  12285595 gtgttcggagttcgaattccaaaccttgcatatattatatattgtctttatcaactgagttaagtt 12285660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 40716016 - 40715955
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| ||||||||||||  |||| |||||||||||||||||| || |||||    
T  40716016 gtcctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttc 40715955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 37932324 - 37932400
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||| |||  |||| |||||||||||||||||| || ||||||||| ||| ||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccctggccacca 37932400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 5001598 - 5001560
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  5001598 ttgcatatattatgtattgtccttatcaaccgagttaag 5001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 31159472 - 31159434
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31159472 ttgcatatattatgtattgtctttatcaactgagttaag 31159434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 583
Target Start/End: Complemental strand, 8545053 - 8544980
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||| |||| ||||||   |||| |||||||||||||||||| ||  |||||||||| ||||||||    
T  8545053 ctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcgaactccgaccacca 8544980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 11637639 - 11637562
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||||||| |||| ||| |||  |||| |||||| ||||||||||| || ||||||||| | |||||||||    
T  11637639 gtcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgaccaccat 11637562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 718
Target Start/End: Complemental strand, 32460050 - 32460013
Alignment:
Q  681 atatattatgtattgtctttatcaaccgagttaagttt 718  Q
    |||||||||||||||||||||||||| |||||||||||    
T  32460050 atatattatgtattgtctttatcaactgagttaagttt 32460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 42473888 - 42473949
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| ||||||||||   ||||| |||||||||||||||||| || |||||    
T  42473888 gtcctcgtgagcttagctcaattgattggaacaatgcataatatatgcaaggtccggggttc 42473949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 18589934 - 18589882
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||| ||| ||||| ||||||||||||||||||    
T  18589934 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggt 18589882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 567
Target Start/End: Original strand, 19759923 - 19759983
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggtt 567  Q
    ||||||||||||||| |||||||| ||   |||| |||||||||||||||||| |||||||    
T  19759923 gtcctcgtgagcttagctcaattggtaggtacaatgcataatatatgcaaggtccgaggtt 19759983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 28207126 - 28207190
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    ||||||||||||||| |||| ||| |||  |||| |||||| ||||||||||| |||||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccgaggttcgaa 28207190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 511 - 583
Target Start/End: Original strand, 36170053 - 36170125
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||| |||||||| ||  || || |||||||||||| ||| || ||||||| ||||||||||||||    
T  36170053 tcgtgagcttaactcaattgctaggaataatgcataatatatgtaagatatgaggttcaaactctgaccacca 36170125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 37791230 - 37791154
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||| |||||||||  ||| ||| || |||||| |||||||||||||||||| |||||||| ||||| | ||||||    
T  37791230 gtccttgtgagcttagttcagttggtagaaacaacgcataatatatgcaaggttcgaggttcaaactccggccacca 37791154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 651 - 715
Target Start/End: Original strand, 39610333 - 39610397
Alignment:
Q  651 agtgttcgaggttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||| ||||||||  ||||||||||||||||||||||||| ||||||  ||||||| ||| ||||    
T  39610333 agtgatcgaggtttgaactccaaacattgcatatattatgcattgtccatatcaactgagctaag 39610397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 583
Target Start/End: Complemental strand, 16579436 - 16579365
Alignment:
Q  512 cgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||| |||| |||| ||| ||| ||||| |||||||||||||||||| || ||||| ||| ||||||||||    
T  16579436 cgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggtccgtggttcaaaccctgaccacca 16579365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 572
Target Start/End: Original strand, 43406680 - 43406739
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||| || |||||| |||||    
T  43406680 gtgagcttatcacaattgataggaacaacgcataatatatgcaaagtccgaggtacgaac 43406739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 568
Target Start/End: Complemental strand, 5246212 - 5246162
Alignment:
Q  518 cttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||| |||||||| |||| |||| |||||||||||||||||| ||||||||    
T  5246212 cttaactcaattggtatagacaatgcataatatatgcaaggttcgaggttc 5246162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 13796322 - 13796376
Alignment:
Q  505 acgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| |||||||||||| |||| | ||||| ||||| ||||||||||||||||||    
T  13796322 acgttctcgtgagcttaactcagtcgatatgaacaatgcataatatatgcaaggt 13796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 19783653 - 19783691
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  19783653 ttgcatatattatgtattgtctttatcaactaagttaag 19783691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 584
Target Start/End: Original strand, 27903110 - 27903184
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    |||||||| |||  ||| ||| ||| ||||| |||||||||||||||||| || ||||| ||||| |||||||||    
T  27903110 ctcgtgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttcaaactccgaccaccat 27903184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 35109392 - 35109458
Alignment:
Q  505 acgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    |||||| |||||||||| |||| ||| || | ||||  ||||||||||||||||| |||||||||||    
T  35109392 acgtccacgtgagcttaactcagttggtaaagacaatacataatatatgcaaggtccgaggttcgaa 35109458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 35109443 - 35109405
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  35109443 ttgcatatattatgtattgtctttaccaactgagttaag 35109405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 37614490 - 37614428
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaact 573  Q
    ||||||||||| |||| ||| || | |||| |||||||||||||||||| |||||||| ||||    
T  37614490 tcgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaact 37614428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 6624770 - 6624835
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| |||  ||  |||| |||||||||||||||||| || |||||||||    
T  6624770 gtcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaac 6624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 583
Target Start/End: Original strand, 13864341 - 13864414
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||| |||| ||| ||| |||||  ||||||||||||||||| || ||||| ||| | ||||||||    
T  13864341 ctcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccacca 13864414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 556
Target Start/End: Original strand, 19248473 - 19248522
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaa 556  Q
    ||||||||||||||| |||| ||| |||| |||| |||||||||||||||    
T  19248473 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaa 19248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 21594453 - 21594392
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||  ||||||  |||||||||  ||||||||||||||||| | ||||||    
T  21594453 gtcctcgtgagcttaattcaatttgtataaacaatacataatatatgcaaggtccaaggttc 21594392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 21598570 - 21598509
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||  ||||||  |||||||||  ||||||||||||||||| | ||||||    
T  21598570 gtcctcgtgagcttaattcaatttgtataaacaatacataatatatgcaaggtccaaggttc 21598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 528 - 573
Target Start/End: Original strand, 25709748 - 25709793
Alignment:
Q  528 ttgatataaacaaagcataatatatgcaaggtacgaggttcgaact 573  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||    
T  25709748 ttgataaaaacaatgcataatatatgcaaggtccgaggtttgaact 25709793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 30893927 - 30893988
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||  || | |||| ||||||||||||||||||| |||||||    
T  30893927 gtcctcgtgagcttaactcagtttgtaaagacaatgcataatatatgcaaggtatgaggttc 30893988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Original strand, 42659570 - 42659623
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| ||||||| ||| ||||||||||||||| || |||||||||||| |||||    
T  42659570 cgtcttcgtgagtttagctcaattgatataaataatgcataatatatgtaaggt 42659623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 567
Target Start/End: Original strand, 6228636 - 6228688
Alignment:
Q  515 gagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggtt 567  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  6228636 gagcttagctcaattgatataaacaatgcataatatatgcaaggtatgaggtt 6228688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 42475177 - 42475112
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| ||| ||||||||| |||||| |||||||||||  |||||||||||    
T  42475177 gtcctcgtgagcttaactcagttggtataaacaatgcataaaatatgcaaggtctgaggttcgaac 42475112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 20455885 - 20455949
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    ||||||||||||||| |||||||| |||  |||| |||||||||||||||||| || ||||||||    
T  20455885 gtcctcgtgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaa 20455949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 33063980 - 33064056
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| |||||||  |||| |||||||||||||||||| ||  |||||||||| | ||||||    
T  33063980 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaactccggccacca 33064056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 9519778 - 9519720
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||| ||||||||||||  |||| |||||||||||||||||| ||| ||||    
T  9519778 ctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggttcgaagttc 9519720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 37320584 - 37320519
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||| |||||||||| |||| ||| || | |||| |||||||||||||||||| ||||||||||||    
T  37320584 gtccacgtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttcgaac 37320519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 40295525 - 40295464
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||| |||| |||||||||||| ||||| ||||||| |||||||| | ||||||||    
T  40295525 gtcctcgtgaacttaactcaattgatatgaacaatgcataatgtatgcaagattcgaggttc 40295464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 567
Target Start/End: Original strand, 7206119 - 7206179
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggtt 567  Q
    ||||||||||||||| |||| ||| || | |||| |||||||||||||||||| |||||||    
T  7206119 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtt 7206179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 573
Target Start/End: Complemental strand, 7121824 - 7121761
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaact 573  Q
    |||||||| ||| |||||||||||||||||| |||||| |||| ||| || |||||||| ||||    
T  7121824 ctcgtgagtttaactcaattgatataaacaatgcataaaatatacaaagttcgaggttcaaact 7121761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 570
Target Start/End: Original strand, 13196694 - 13196757
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcga 570  Q
    |||||||||| |||| |||| ||| ||| ||||| |||||||||||||||||| || |||||||    
T  13196694 gtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggttcggggttcga 13196757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 19967413 - 19967464
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||| |||| ||||||| ||||| ||||||||| ||||||||    
T  19967413 tcctcgtgagcttagctcagttgatatgaacaatgcataatatgtgcaaggt 19967464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 38904056 - 38904107
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||| ||| ||||||| | |||| ||||||||||||||||||    
T  38904056 tcctcgtgagcttagctcgattgatagatacaatgcataatatatgcaaggt 38904107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 558
Target Start/End: Original strand, 44694682 - 44694733
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaagg 558  Q
    |||||||||| |||| |||| |||||||| |||| |||||||||||||||||    
T  44694682 gtcctcgtgaacttaactcagttgatatagacaatgcataatatatgcaagg 44694733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 32204538 - 32204588
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaag 557  Q
    ||||||||||||||| ||||||||  || ||||| ||||||||||||||||    
T  32204538 gtcctcgtgagcttagctcaattggcatgaacaatgcataatatatgcaag 32204588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 44026601 - 44026663
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||| |||||||| |||  |||| |||||||||||| ||||| || |||||    
T  44026601 cgtcctcgtgagcttaactcaattggtatggacaacgcataatatatgtaaggttcggggttc 44026663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 1861877 - 1861824
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||||| ||||  ||||||  |||| ||||||||||||||||||    
T  1861877 cgtcctcgtgagcttagctcagctgatatggacaatgcataatatatgcaaggt 1861824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 2256965 - 2257030
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| ||| |||  |||| ||||||||||||||||||  | |||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctggggttcgaac 2257030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 16082126 - 16082179
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaa-gcataatatatgcaaggt 559  Q
    ||||||||||| ||| ||||||||||| | ||||| ||||||||||||||||||    
T  16082126 gtcctcgtgagtttaactcaattgataaagacaaatgcataatatatgcaaggt 16082179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 22523079 - 22523018
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||| |||  ||||  ||||||||||||||||| ||||||||    
T  22523079 gtcctcgtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttc 22523018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 556
Target Start/End: Complemental strand, 22571932 - 22571883
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaa 556  Q
    |||||||||| |||| |||| |||||||| |||| |||||||||||||||    
T  22571932 gtcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaa 22571883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 568
Target Start/End: Original strand, 22608525 - 22608582
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||| |||| ||| || | |||| ||||||||||||||||||| |||||||    
T  22608525 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttc 22608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 560
Target Start/End: Original strand, 24548111 - 24548164
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggta 560  Q
    ||||||||||| ||| |||||||| |||| |||| |||||||||||| ||||||    
T  24548111 gtcctcgtgagtttaactcaattggtatagacaatgcataatatatgtaaggta 24548164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 27411086 - 27411151
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| |||||||  ||   |||||||||||||||||| || |||||||||    
T  27411086 gtcctcgtgagcttagctcagttgatatggaccttgcataatatatgcaaggtccggggttcgaac 27411151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 574
Target Start/End: Original strand, 35727429 - 35727498
Alignment:
Q  505 acgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactc 574  Q
    |||||| |||||||||| |||| ||| ||  ||||| ||||||||||||||||||  | |||||||||||    
T  35727429 acgtccccgtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtttggggttcgaactc 35727498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 714
Target Start/End: Complemental strand, 42200730 - 42200693
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaa 714  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  42200730 ttgcatatattatgtattgtctttaccaactgagttaa 42200693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 1091173 - 1091249
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||| |||||||||| || ||||| ||||||||||||||    
T  1091173 gtcctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaaggttcggggttcaaactctgaccacca 1091249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 507 - 581
Target Start/End: Complemental strand, 3693863 - 3693789
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccac 581  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||| |||||  ||||||| ||| | ||||||    
T  3693863 gtcctcgtgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttcaaaccccgaccac 3693789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 574
Target Start/End: Original strand, 49222810 - 49222877
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactc 574  Q
    ||||||||||||||| |||||||||||  ||||| ||| |||||||||||||| || ||||| |||||    
T  49222810 gtcctcgtgagcttaactcaattgataggaacaatgcacaatatatgcaaggtccggggttcaaactc 49222877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 15382880 - 15382822
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    ||||||||| |||| ||||||| ||||| | |||||||||||||||| |||||||||||    
T  15382880 gtgagcttaactcagttgatatgaacaatgtataatatatgcaaggtccgaggttcgaa 15382822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 583
Target Start/End: Complemental strand, 16967262 - 16967185
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||| ||||||||||| || | |||||||  |||| |||||||||||||||||| |||||||| ||||| | ||||||    
T  16967262 cgtcttcgtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaactccggccacca 16967185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 32950828 - 32950776
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| |||||||||| |||| ||| ||||||||| ||||||||||||||||||    
T  32950828 gtccacgtgagcttaactcagttggtataaacaatgcataatatatgcaaggt 32950776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 48682000 - 48681948
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||| ||| ||||| ||||||||||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 48681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 52441578 - 52441526
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||||||||||||||    
T  52441578 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 584
Target Start/End: Complemental strand, 12522180 - 12522109
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||| |||||||| ||| ||||| ||||||||||| ||||||  ||||||| ||| | |||||||||    
T  12522180 gtgagcttagctcaattggtatgaacaacgcataatatatacaaggtctgaggttcaaaccccgaccaccat 12522109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 581
Target Start/End: Original strand, 9527991 - 9528065
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccac 581  Q
    ||||||||||||||| || ||||||| | |||||  ||||| ||||||||||| |||||||| ||| | ||||||    
T  9527991 gtcctcgtgagcttagctaaattgatttgaacaatacataaaatatgcaaggttcgaggttcaaaccccgaccac 9528065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 26755609 - 26755671
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||| |||| |||||||  |||| |||| ||||||||||||| || |||||    
T  26755609 cgtcctcgtgagcttagctcagttgatatggacaatgcattatatatgcaaggtccggggttc 26755671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 572
Target Start/End: Original strand, 37050922 - 37050988
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||| |||||||||| |||||||| ||| || || |||||| ||||||||||| || |||||||||    
T  37050922 cgtccacgtgagcttaactcaattggtatgaataatgcataaaatatgcaaggtccggggttcgaac 37050988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 581
Target Start/End: Original strand, 37705119 - 37705193
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccac 581  Q
    |||||||||| |||| ||||| || |||  |||| ||||||||||||||| ||  ||||||||||| ||||||||    
T  37705119 gtcctcgtgaacttaactcaactggtatggacaatgcataatatatgcaatgtttgaggttcgaaccctgaccac 37705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 678 - 712
Target Start/End: Original strand, 46082531 - 46082565
Alignment:
Q  678 tgcatatattatgtattgtctttatcaaccgagtt 712  Q
    |||||||||||| ||||||||||||||||||||||    
T  46082531 tgcatatattatatattgtctttatcaaccgagtt 46082565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 3431324 - 3431401
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||| ||| |||| ||| ||  || || ||||||||||||||| ||||||||||| ||| | |||||||||    
T  3431324 gtcctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccaccat 3431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 23915574 - 23915525
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||| ||||||| ||||||| ||||| |||||||||||| |||||    
T  23915574 ctcgtgagcatatctcagttgatatgaacaatgcataatatatggaaggt 23915525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 583
Target Start/End: Original strand, 26010215 - 26010292
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||| ||| |||||||||||   |||| | |||||| ||||||||| || ||||| ||| ||||||||||    
T  26010215 cgtcctcgtgagtttagctcaattgatagtgacaatgtataatacatgcaaggttcggggttcaaaccctgaccacca 26010292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 30795695 - 30795760
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||| |||| |||| ||| ||  ||||| |||||||||||||||||| | ||||||||||    
T  30795695 gtcctcgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccaaggttcgaac 30795760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 706
Target Start/End: Complemental strand, 32021330 - 32021301
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaac 706  Q
    ||||||||||||||||||||||||||||||    
T  32021330 ttgcatatattatgtattgtctttatcaac 32021301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 34632163 - 34632224
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||| |||| |||| | |||||||||||||| | ||||||||    
T  34632163 gtcctcgtgagcttagctcagttggtatagacaatgtataatatatgcaagatccgaggttc 34632224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 572
Target Start/End: Original strand, 35442853 - 35442914
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||| | |||| ||| ||| ||||| ||||||||||| |||||| ||||||||||||    
T  35442853 tcgtgagctaaactcagttggtatgaacaatgcataatatattcaaggtccgaggttcgaac 35442914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 560
Target Start/End: Complemental strand, 36467092 - 36467039
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggta 560  Q
    ||||| |||||||||  |||||||||||  |||| |||||||||||||||||||    
T  36467092 gtccttgtgagcttaattcaattgatatggacaatgcataatatatgcaaggta 36467039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 583
Target Start/End: Complemental strand, 14279641 - 14279562
Alignment:
Q  504 gacgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||| |||||| ||| |||| ||| |||| |||| |||||| ||||||||||| || ||||||||||||||||||||    
T  14279641 gacgtccacgtgagtttaactcagttggtatagacaatgcataaaatatgcaaggttcggggttcgaactctgaccacca 14279562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 10732842 - 10732777
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||| | ||||||||||    
T  10732842 gtcctcgtgagcttaactcaattggtatgaacaatgcataatatatacaaggttcaaggttcgaac 10732777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 568
Target Start/End: Complemental strand, 13357508 - 13357447
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||| |||  |||| |||||||||||||||||||||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttc 13357447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 27718961 - 27718885
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| |||||||  |||| |||||||||||||||||| ||  |||| ||||| ||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 574
Target Start/End: Complemental strand, 12701064 - 12700997
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactc 574  Q
    ||||| ||||||||| |||||||| ||  ||||| ||||||||||||||| || ||||||||||||||    
T  12701064 gtcctagtgagcttagctcaattggtaataacaatgcataatatatgcaaagtccgaggttcgaactc 12700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 574378 - 574455
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||| ||||||||| |||| |||||||| |||| |||||||||||| ||||| ||  |||||||||  |||||||||    
T  574378 gtccttgtgagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaacttcgaccaccat 574455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 1877726 - 1877677
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  1877726 ctcgtgagcttaactcagttgatatagacaatgcataatatatgcaaggt 1877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 560
Target Start/End: Complemental strand, 17062406 - 17062353
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggta 560  Q
    ||||||||||||||| |||| |||||||| ||||  ||||||||||||||||||    
T  17062406 gtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggta 17062353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 560
Target Start/End: Original strand, 17585952 - 17586005
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggta 560  Q
    ||||||||||||||| |||| |||||||| ||||  ||||||||||||||||||    
T  17585952 gtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggta 17586005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 584
Target Start/End: Complemental strand, 28436614 - 28436537
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||| ||||||||| |||||||||||| ||||| |||||||||||| || || | | |||| ||||| |||||||||    
T  28436614 gtcctagtgagcttagctcaattgatatcaacaatgcataatatatgtaaagtccaaagttcaaactccgaccaccat 28436537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 511 - 559
Target Start/End: Original strand, 24687777 - 24687825
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| |||||| |||||||||||||||||| |||||||||||| |||||    
T  24687777 tcgtaagcttagctcaattgatataaacaatgcataatatatgtaaggt 24687825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 37872178 - 37872254
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||| ||||||||| |||||||| |||| ||||  ||||| |||||||||||  | ||||||||||| ||||||||    
T  37872178 gtccttgtgagcttagctcaattgctatagacaatacataaaatatgcaaggtttggggttcgaactccgaccacca 37872254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 44293569 - 44293645
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||| |||| |||| |||||||||||| ||| |  | ||||||||| ||||||||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgtaagatctggggttcgaaccctgaccacca 44293645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 583
Target Start/End: Original strand, 28084277 - 28084351
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||||| |||| |||||| | |||| | |||||||||||||||| ||| |||| ||||| ||||||||    
T  28084277 tcctcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggttcgatgttcaaactc-gaccacca 28084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Original strand, 40316849 - 40316896
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatg 553  Q
    ||||||||||||||||||||| ||||||| || || ||||||||||||    
T  40316849 cgtcctcgtgagcttatctcagttgatatgaataatgcataatatatg 40316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 508 - 574
Target Start/End: Original strand, 10152451 - 10152517
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactc 574  Q
    |||||||||||||| |||| ||| |||| |||| | |||| |||||||||||  |||||||||||||    
T  10152451 tcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaaggtttgaggttcgaactc 10152517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 13286125 - 13286175
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaag 557  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||||||||||||    
T  13286125 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 13286175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 17062357 - 17062395
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  17062357 ttgcatatattatgtattgtctatatcaactgagttaag 17062395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 17586001 - 17585963
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  17586001 ttgcatatattatgtattgtctatatcaactgagttaag 17585963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 572
Target Start/End: Complemental strand, 20469375 - 20469313
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||  ||| ||| ||||||||| |||||||||||||||||| ||  ||||||||    
T  20469375 ctcgtgagcttagatcagttggtataaacaatgcataatatatgcaaggttcggagttcgaac 20469313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 572
Target Start/End: Complemental strand, 1765017 - 1764956
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||| |||| ||||||| ||||| |||||| ||||||||| | || |||||||||    
T  1765017 tcgtgagcttaactcagttgatatgaacaacgcataaaatatgcaagatccggggttcgaac 1764956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 3456889 - 3456836
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| |||||| |||| |||||||||||| ||||| |||||||||||| |||||    
T  3456889 cgtcatcgtgaacttaactcaattgatatgaacaatgcataatatatgtaaggt 3456836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 11708980 - 11709057
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||||||| |||| ||| ||   |||| |||||||||||||||||| ||| |||| ||| | |||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccaccat 11709057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 715
Target Start/End: Original strand, 13394166 - 13394207
Alignment:
Q  674 acattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||||||| ||||||| || |||||||||||||    
T  13394166 acattgcatatattatgcattgtctataccaaccgagttaag 13394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 15310316 - 15310369
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcat-aatatatgcaaggt 559  Q
    ||||||||||||||| |||| |||||||| |||| |||| ||||||||||||||    
T  15310316 gtcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 15310369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 15490685 - 15490738
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcat-aatatatgcaaggt 559  Q
    ||||||||||||||| |||| |||||||| |||| |||| ||||||||||||||    
T  15490685 gtcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 15490738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 583
Target Start/End: Complemental strand, 19163604 - 19163527
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||||||| |||| ||| |||  |||| ||||||| |||||||||| || ||||| ||| | ||||||||    
T  19163604 cgtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccacca 19163527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 21557427 - 21557504
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccaccat 584  Q
    ||||||||||||||| |||| ||  |||  |||| |||||||||||| ||||| |||||||||||  | |||||||||    
T  21557427 gtcctcgtgagcttaactcagttagtatggacaatgcataatatatgtaaggtccgaggttcgaatcccgaccaccat 21557504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 27050772 - 27050813
Alignment:
Q  542 gcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||| |||||||||||| ||||||||||| ||||||||||    
T  27050772 gcataaaatatgcaaggtatgaggttcgaaccctgaccacca 27050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 29499765 - 29499830
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||||||| |||  |||| |||||| ||||||||||| |  |||||||||    
T  29499765 gtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaaggtccagggttcgaac 29499830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 34997452 - 34997505
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcat-aatatatgcaaggt 559  Q
    ||||||||||||||| |||| |||||||| |||| |||| ||||||||||||||    
T  34997452 gtcctcgtgagcttagctcagttgatatagacaatgcataaatatatgcaaggt 34997505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 39433404 - 39433469
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| ||||||| |||||  ||||| |||||||||||  | |||||||||    
T  39433404 gtcctcgtgagcttagctcagttgatatgaacaatacataaaatatgcaaggtctggggttcgaac 39433469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000005; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 34934348 - 34934295
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  34934348 cgtcttcgtgagcttaactcaattggtataaacaatgcataatatatgcaaggt 34934295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 35142216 - 35142140
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| |||||||  |||| ||||||||||||||| ||  ||||||||||| | ||||||||    
T  35142216 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccacca 35142140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 39706612 - 39706666
Alignment:
Q  505 acgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||| ||| |||||||| |||||||||  |||||||||||||||||    
T  39706612 acgtcctcgtgagattaactcaattggtataaacaatacataatatatgcaaggt 39706666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 583
Target Start/End: Complemental strand, 45046284 - 45046206
Alignment:
Q  505 acgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||||||||| || |||| |||||||  |||   ||||||||||||||||| || ||||| ||||||||||||||    
T  45046284 acgtcctcgtgagcatagctcagttgatatggacagtacataatatatgcaaggtccggggttcaaactctgaccacca 45046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 511 - 583
Target Start/End: Complemental strand, 1285132 - 1285060
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||| ||| |||| ||||||  ||||| |||||||||||||||| | || ||||||| ||||||||||||    
T  1285132 tcgtgagtttaactcagttgataggaacaatgcataatatatgcaagatccggggttcgagctctgaccacca 1285060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 715
Target Start/End: Original strand, 48007548 - 48007603
Alignment:
Q  660 ggttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||||||| || |||||||||||||| |||||| ||| |||| ||||||||    
T  48007548 ggttcaaactccagaccttgcatatattatgcattgtcattaccaactgagttaag 48007603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 8683064 - 8683114
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaag 557  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||||||||||||    
T  8683064 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 8683114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 572
Target Start/End: Complemental strand, 8879811 - 8879749
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||||| |||| ||| |||| |||| |||||||||||||||||| || | |||||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatatatgcaaggttcgggattcgaac 8879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 9893148 - 9893086
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||| ||||||||||||||||||||||  ||||  ||||| ||||||||||| ||| ||||    
T  9893148 cgtcctggtgagcttatctcaattgatatggacaatacataaaatatgcaaggttcgaagttc 9893086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 583
Target Start/End: Original strand, 21105603 - 21105673
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||| |||| ||| |||  | || |||||||||||||||||| |||||||||||| | ||||||||    
T  21105603 gtgagcttagctcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaaccccgaccacca 21105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 572
Target Start/End: Complemental strand, 24099299 - 24099237
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||| || | |||||||||||||||||| |||||||||||| ||||| || |||| ||||    
T  24099299 ctcgtgaactaagctcaattgatataaacaatgcataatatatgtaaggttcggggtttgaac 24099237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 583
Target Start/End: Original strand, 34773255 - 34773301
Alignment:
Q  537 acaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||    
T  34773255 acaatgcataatatatgcaaggtatgaggtttaaactctgaccacca 34773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 661 - 715
Target Start/End: Complemental strand, 38911358 - 38911304
Alignment:
Q  661 gttcaaactccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||| |||| ||||| |||||||||||||  ||||||||||||||| ||||||||    
T  38911358 gttcgaacttcaaaccttgcatatattatacattgtctttatcaactgagttaag 38911304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 572
Target Start/End: Original strand, 40875039 - 40875101
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||||| |||  |||| |||||||| ||||||||||||||| || || |||||||||    
T  40875039 ctcgtgagcttaactcggttgacataaacaatgcataatatatgcaatgtccggggttcgaac 40875101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Complemental strand, 45979156 - 45979118
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  45979156 ttgcatatattatgtattgtctttatcaaatgagttaag 45979118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 5458135 - 5458086
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||| |||| ||||||  ||||| ||||||||||||||||||    
T  5458135 ctcgtgagcttagctcagttgataagaacaatgcataatatatgcaaggt 5458086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 10244721 - 10244782
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| ||| |||  |||| |||||||||||||||||| || |||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 10244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 26825464 - 26825419
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatat 552  Q
    ||||||||||||||| ||||||||||||  |||| |||||||||||    
T  26825464 gtcctcgtgagcttacctcaattgatatggacaatgcataatatat 26825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 29726794 - 29726855
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||| |||| || ||||| | |||||||||||||||| || |||||    
T  29726794 gtcctcgtgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggttc 29726855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 714
Target Start/End: Complemental strand, 44106671 - 44106634
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaa 714  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  44106671 ttgcatatattatgtattgtctctatcaactgagttaa 44106634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Original strand, 45088869 - 45088922
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||| || |||||| |||||||| ||| ||||| ||||||||||||||||||    
T  45088869 cgtccttgtaagcttaactcaattggtatgaacaatgcataatatatgcaaggt 45088922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 714
Target Start/End: Complemental strand, 45425496 - 45425459
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaa 714  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  45425496 ttgcatatattatgcattgtctttatcaactgagttaa 45425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 13496110 - 13496162
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  13496110 gtcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggt 13496162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 572
Target Start/End: Complemental strand, 1918522 - 1918460
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||| ||| |||| ||| |||| |||| |||||||||||||||||| ||||||||||||    
T  1918522 ctcgtgagtttaactcagttggtatagacaatgcataatatatgcaaggtccgaggttcgaac 1918460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 8809299 - 8809361
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||| |||  |||||||||| |||||| |||||||||||||||| | ||||||||    
T  8809299 cgtcctcgtgagtttagttcaattgataaaaacaatgcataatatatgcaagatccgaggttc 8809361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 706
Target Start/End: Original strand, 28046171 - 28046225
Alignment:
Q  652 gtgttcgaggttcaaactccaaacattgcatatattatgtattgtctttatcaac 706  Q
    ||||||| |||||||||  ||||| |||||||||||||| |||||||||||||||    
T  28046171 gtgttcggggttcaaacctcaaaccttgcatatattatgcattgtctttatcaac 28046225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 9111041 - 9111106
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||||||||  ||| ||| ||| ||||| |||||||||||||||||| || |||||||||    
T  9111041 gtcctcgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaac 9111106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 2445293 - 2445369
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||| |||||| |||| ||||||| ||||| ||||||||||| |||| | || ||||||||| | ||||||||    
T  2445293 gtcctcgtaagcttaactcagttgatatgaacaatgcataatatatacaagattcggggttcgaaccccgaccacca 2445369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 567
Target Start/End: Complemental strand, 9392735 - 9392675
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggtt 567  Q
    ||||||||||||||| |||| ||| ||| || || |||||||||||||||||| |||||||    
T  9392735 gtcctcgtgagcttagctcagttgttatgaaaaatgcataatatatgcaaggtccgaggtt 9392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 9665304 - 9665380
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||| ||| |||||||| ||| |||||   |||||||||| ||||| || ||||||||||| ||||||||    
T  9665304 gtcctcgtgagtttaactcaattggtatgaacaatatataatatatgtaaggtccggggttcgaactccgaccacca 9665380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 670 - 726
Target Start/End: Complemental strand, 14679175 - 14679119
Alignment:
Q  670 ccaaacattgcatatattatgtattgtctttatcaaccgagttaagtttgcggagac 726  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||||||  |||||||    
T  14679175 ccaaaccttgcatatattatgcattgtccttaccaaccgagttaagttcacggagac 14679119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Complemental strand, 29335642 - 29335590
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  29335642 gtcctcgtgagcttaactcagttagtataaacaatgcataatatatgcaaggt 29335590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 32053782 - 32053858
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||| |||  |||| |||||||||||||||||| || ||||| ||||| | ||||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacca 32053858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 571
Target Start/End: Original strand, 4450261 - 4450320
Alignment:
Q  512 cgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    |||||||||| |||| |||||| | |||| |||||||||||||||||| || ||||||||    
T  4450261 cgtgagcttagctcagttgataaagacaatgcataatatatgcaaggtccggggttcgaa 4450320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 559
Target Start/End: Complemental strand, 12904379 - 12904332
Alignment:
Q  512 cgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  12904379 cgtgagcttacctcagttgatatgaacaatgcataatatatgcaaggt 12904332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Original strand, 28951394 - 28951445
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||| |||| ||| ||| ||||| ||||||||||||||||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggt 28951445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 715
Target Start/End: Original strand, 7081672 - 7081710
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  7081672 ttgcatatattatgtattgtctttatcaactgagctaag 7081710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 559
Target Start/End: Complemental strand, 23635775 - 23635729
Alignment:
Q  513 gtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||| |||||||| |||| |||||||||||| |||||    
T  23635775 gtgagcttatctcagttgatatatacaatgcataatatatgtaaggt 23635729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 32193923 - 32193865
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||| ||| |||| ||| ||  ||||| |||||||||||||||||||||||||||    
T  32193923 ctcgtgagtttagctcagttggtaagaacaatgcataatatatgcaaggtacgaggttc 32193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 655816 - 655751
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||| ||||||||| |||| ||| |||  |||| |||||||||||||||||| || |||||||||    
T  655816 gtccttgtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaac 655751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 568
Target Start/End: Complemental strand, 8629759 - 8629702
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||| |||||||| |||  |||| |||||||||||||||||| || |||||    
T  8629759 tcgtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttc 8629702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 29740476 - 29740537
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| |||||||| |||  |||| |||||||||| ||||||| || |||||    
T  29740476 gtcctcgtgagcttagctcaattggtatggacaatgcataatatacgcaaggtccggggttc 29740537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 33938743 - 33938694
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||| |||| ||| ||| ||||| ||||||||||||||||||    
T  33938743 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 33938694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000008; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 511 - 574
Target Start/End: Original strand, 42074101 - 42074164
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactc 574  Q
    ||||||||||| ||||| || ||| ||||| ||||||||||||||||||  |||||||||||||    
T  42074101 tcgtgagcttaactcaactggtatgaacaatgcataatatatgcaaggtctgaggttcgaactc 42074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 583
Target Start/End: Original strand, 10440708 - 10440754
Alignment:
Q  537 acaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||    
T  10440708 acaatgcataatatatgcaaggtacgaggttcgaattccgaccacca 10440754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 572
Target Start/End: Complemental strand, 28244171 - 28244106
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| ||| ||| ||||| |||||| ||||||||||| || |||||||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaac 28244106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 564
Target Start/End: Original strand, 33223862 - 33223919
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgag 564  Q
    ||||||||||||||| |||| ||| || |||||| |||||||||||||||||| ||||    
T  33223862 gtcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggttcgag 33223919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 53162192 - 53162253
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    ||||||||||||||| ||||||||||||  |||| |||||| |||||||||||  |||||||    
T  53162192 gtcctcgtgagcttagctcaattgatatggacaatgcataaaatatgcaaggtttgaggttc 53162253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 6835161 - 6835213
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| |||||||| || ||||||| ||||||||||| |||||    
T  6835161 gtcctcgtgagcttaactcaattggtaaaaacaaaacataatatatgtaaggt 6835213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 666 - 714
Target Start/End: Complemental strand, 7824861 - 7824813
Alignment:
Q  666 aactccaaacattgcatatattatgtattgtctttatcaaccgagttaa 714  Q
    ||||||| || |||||||||||||||||||||| ||||||| |||||||    
T  7824861 aactccagaccttgcatatattatgtattgtctatatcaactgagttaa 7824813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 21331484 - 21331420
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaa 571  Q
    ||||||||||||||| |||| ||| |||  |||| |||||||||||||||||| || ||||||||    
T  21331484 gtcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttcgaa 21331420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Original strand, 22722396 - 22722472
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||  ||| ||||| |||||| ||||||||||| |||||||| ||| | ||||||||    
T  22722396 gtcctcgtgagcttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccacca 22722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 33633385 - 33633309
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||||||||||||| |||| ||  |||| |||| |||||||||||| ||| | ||  |||||||||||||||||||    
T  33633385 gtcctcgtgagcttaactcagttagtatagacaatgcataatatatgtaagatccggagttcgaactctgaccacca 33633309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 559
Target Start/End: Complemental strand, 5428502 - 5428451
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||    
T  5428502 tccttgtgagtttagctcaattgataaaaacaatgcataatatatgcaaggt 5428451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 583
Target Start/End: Complemental strand, 28430603 - 28430556
Alignment:
Q  536 aacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    ||||| ||||||||||||||||||  ||||||| ||||||||||||||    
T  28430603 aacaatgcataatatatgcaaggtctgaggttcaaactctgaccacca 28430556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 652 - 706
Target Start/End: Complemental strand, 14741862 - 14741808
Alignment:
Q  652 gtgttcgaggttcaaactccaaacattgcatatattatgtattgtctttatcaac 706  Q
    |||| |||||||| |||||||||| |||||||||||||| |||||| ||| ||||    
T  14741862 gtgtccgaggttcgaactccaaaccttgcatatattatgcattgtccttaccaac 14741808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 581
Target Start/End: Original strand, 24348381 - 24348455
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccac 581  Q
    ||||| ||||||||||||| ||| | |  ||||| ||||||||||||||||||  ||||||| ||||| ||||||    
T  24348381 gtccttgtgagcttatctcgattaacaggaacaatgcataatatatgcaaggtcagaggttcaaactccgaccac 24348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 31138411 - 31138461
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaag 557  Q
    |||||||| ||||||||||| |||||| | |||| ||||||||||||||||    
T  31138411 gtcctcgtaagcttatctcagttgatagagacaatgcataatatatgcaag 31138461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 583
Target Start/End: Complemental strand, 5941362 - 5941285
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||| ||||||||||| |||| ||| ||| ||||| |||||||||||||| ||| ||   ||||||| ||||||||||    
T  5941362 cgtcttcgtgagcttaactcagttggtatgaacaatgcataatatatgcatggttcggaattcgaaccctgaccacca 5941285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 22462362 - 22462317
Alignment:
Q  670 ccaaacattgcatatattatgtattgtctttatcaaccgagttaag 715  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  22462362 ccaaacattacatatattatgcattgtccttatcaactgagttaag 22462317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 559
Target Start/End: Original strand, 26768394 - 26768447
Alignment:
Q  506 cgtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||||||||||||  || |||| |||| |||||| |||||||||||    
T  26768394 cgtcctcgtgagcttatctcagctggtatagacaatgcataaaatatgcaaggt 26768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 718
Target Start/End: Complemental strand, 39438548 - 39438507
Alignment:
Q  677 ttgcatatattatgtattgtctttatcaaccgagttaagttt 718  Q
    |||||||||||||| ||||||||||||||| || ||||||||    
T  39438548 ttgcatatattatgcattgtctttatcaacagaattaagttt 39438507  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 726
Target Start/End: Complemental strand, 43352753 - 43352708
Alignment:
Q  681 atatattatgtattgtctttatcaaccgagttaagtttgcggagac 726  Q
    ||||| |||||||| ||||||||||||||||||||||  |||||||    
T  43352753 atataatatgtattatctttatcaaccgagttaagttcacggagac 43352708  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 559
Target Start/End: Complemental strand, 43490481 - 43490432
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    |||||||||||| |||| ||| ||| ||||| ||||||||||||||||||    
T  43490481 ctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 43490432  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 572
Target Start/End: Original strand, 44579630 - 44579695
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    ||||||||||||||| |||| ||| |||  |||| |||||| ||||||||||| || |||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaac 44579695  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 573
Target Start/End: Complemental strand, 45309209 - 45309144
Alignment:
Q  508 tcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaact 573  Q
    |||||||||||||| |||| ||| |||||||||   ||||||||| ||||||  ||||||||||||    
T  45309209 tcctcgtgagcttaactcagttggtataaacaatttataatatatacaaggtttgaggttcgaact 45309144  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 559
Target Start/End: Original strand, 46093129 - 46093162
Alignment:
Q  526 aattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||||||| ||||||||||||||||||    
T  46093129 aattgatataaacaatgcataatatatgcaaggt 46093162  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 511 - 559
Target Start/End: Original strand, 122889 - 122937
Alignment:
Q  511 tcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggt 559  Q
    ||||||||||| |||||||| ||| ||||| ||||||||||||||||||    
T  122889 tcgtgagcttaactcaattggtatgaacaatgcataatatatgcaaggt 122937  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 572
Target Start/End: Complemental strand, 91243 - 91181
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaac 572  Q
    |||||||||||| |||  |||| |||||||| ||||||||||||||| || || |||||||||    
T  91243 ctcgtgagcttaactcggttgacataaacaatgcataatatatgcaatgtccggggttcgaac 91181  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 22905 - 22966
Alignment:
Q  507 gtcctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttc 568  Q
    |||||||||||||||  | | ||||||| ||||| |||||| ||||||||||| ||||||||    
T  22905 gtcctcgtgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttc 22966  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 583
Target Start/End: Complemental strand, 14250 - 14177
Alignment:
Q  510 ctcgtgagcttatctcaattgatataaacaaagcataatatatgcaaggtacgaggttcgaactctgaccacca 583  Q
    |||||||| ||| |||| ||| ||| ||||| ||||||||||||||||||| | ||||| ||| | ||||||||    
T  14250 ctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccacca 14177  T

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