View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2961_low_14 (Length: 304)
Name: NF2961_low_14
Description: NF2961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2961_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 41735549 - 41735275
Alignment:
| Q |
18 |
aaggggatgataacaggtttttgagtgaggtttatttggtttgaagttgaagtggtgacgatggttgtgggggtgaaggaaagaagagaaggagagagtt |
117 |
Q |
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| T |
41735549 |
aaggggatgataacaggtttttgagtgaggtttatttggtttgaagttgaagtggtgacggtggttgtgggggtgaaggaaagaagagaaggagagagtt |
41735450 |
T |
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| Q |
118 |
gaattgagttggagttggaattggaggagtgcctccatttttccatgtatcgttcgtatcctctctctgttttcaactgcatttcttctatcgtacttgg |
217 |
Q |
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| T |
41735449 |
gaattgagttggagttggaattggaggagtgcctccatttttccatgtatcgttcgtatcctctctctgttttcaactgcatttcttctatcgtacttgg |
41735350 |
T |
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| Q |
218 |
ttttatttggcgctagagatagataatagatatattgtaccgtttaactctctgcgtttttagttacggtgcctatg |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
41735349 |
ttttatttggcgctagagatagataatagatatattgtaccgtttaa--ctctgcgtttttagttacggtgcctatg |
41735275 |
T |
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