View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2961_low_15 (Length: 298)

Name: NF2961_low_15
Description: NF2961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2961_low_15
NF2961_low_15
[»] chr8 (42 HSPs)
chr8 (1-256)||(34789858-34790113)
chr8 (1-261)||(11290031-11290291)
chr8 (1-256)||(5973103-5973356)
chr8 (1-214)||(7944518-7944731)
chr8 (1-181)||(15167411-15167588)
chr8 (1-199)||(41677169-41677367)
chr8 (1-102)||(30883335-30883436)
chr8 (1-102)||(45475823-45475924)
chr8 (1-105)||(8646209-8646312)
chr8 (5-117)||(39332405-39332517)
chr8 (1-105)||(41879184-41879288)
chr8 (5-177)||(34048705-34048878)
chr8 (4-102)||(2952220-2952318)
chr8 (1-102)||(13534683-13534783)
chr8 (1-102)||(13624223-13624323)
chr8 (1-102)||(23606625-23606726)
chr8 (1-102)||(42600788-42600889)
chr8 (5-105)||(5860744-5860844)
chr8 (1-116)||(15078750-15078865)
chr8 (5-120)||(14509983-14510097)
chr8 (5-102)||(23798261-23798358)
chr8 (29-117)||(5942687-5942775)
chr8 (2-102)||(8102918-8103018)
chr8 (4-102)||(10917397-10917495)
chr8 (5-87)||(30674403-30674485)
chr8 (6-117)||(25561496-25561605)
chr8 (1-102)||(37430154-37430255)
chr8 (13-117)||(5721550-5721654)
chr8 (5-47)||(9108554-9108596)
chr8 (131-181)||(25561631-25561681)
chr8 (1-98)||(3048513-3048610)
chr8 (134-181)||(15078688-15078735)
chr8 (1-44)||(38009148-38009191)
chr8 (9-87)||(23941095-23941173)
chr8 (5-47)||(34868177-34868219)
chr8 (135-199)||(8646109-8646174)
chr8 (135-180)||(10917344-10917389)
chr8 (135-178)||(8102845-8102888)
chr8 (135-180)||(23606734-23606779)
chr8 (135-180)||(23798366-23798411)
chr8 (135-180)||(42600735-42600780)
chr8 (69-105)||(38009203-38009239)
[»] chr3 (42 HSPs)
chr3 (5-261)||(49392941-49393195)
chr3 (1-261)||(8420176-8420436)
chr3 (5-98)||(25855435-25855527)
chr3 (5-207)||(789841-790042)
chr3 (1-181)||(26279471-26279652)
chr3 (1-102)||(8073334-8073435)
chr3 (1-102)||(21582780-21582881)
chr3 (1-102)||(37168376-37168477)
chr3 (1-102)||(54619199-54619300)
chr3 (1-105)||(27078565-27078669)
chr3 (1-105)||(27084362-27084466)
chr3 (1-105)||(53506880-53506984)
chr3 (1-201)||(54574823-54575023)
chr3 (1-102)||(3953892-3953993)
chr3 (1-181)||(28689357-28689535)
chr3 (1-102)||(34290632-34290733)
chr3 (5-89)||(32319155-32319239)
chr3 (1-102)||(38681089-38681190)
chr3 (4-99)||(54407157-54407252)
chr3 (12-102)||(44708486-44708576)
chr3 (1-102)||(36716021-36716122)
chr3 (1-102)||(42098810-42098911)
chr3 (1-102)||(43207234-43207334)
chr3 (13-102)||(47467693-47467782)
chr3 (1-102)||(18372488-18372593)
chr3 (11-102)||(50939239-50939330)
chr3 (1-99)||(9878683-9878781)
chr3 (1-62)||(42453453-42453514)
chr3 (1-102)||(53149310-53149411)
chr3 (1-101)||(52374666-52374766)
chr3 (1-102)||(36605974-36606075)
chr3 (1-62)||(23641314-23641375)
chr3 (135-181)||(29598039-29598085)
chr3 (135-180)||(44708433-44708478)
chr3 (135-199)||(52374570-52374635)
chr3 (135-209)||(36179629-36179704)
chr3 (138-181)||(42453343-42453386)
chr3 (137-180)||(50939340-50939383)
chr3 (4-62)||(50258622-50258680)
chr3 (135-180)||(43207342-43207387)
chr3 (135-180)||(53506989-53507034)
chr3 (135-180)||(54407262-54407307)
[»] chr5 (51 HSPs)
chr5 (1-117)||(36868869-36868985)
chr5 (1-252)||(10407314-10407568)
chr5 (1-120)||(33037768-33037887)
chr5 (1-181)||(34425831-34426010)
chr5 (5-117)||(2412079-2412191)
chr5 (5-117)||(14318382-14318494)
chr5 (1-105)||(38869356-38869460)
chr5 (1-181)||(40794320-40794497)
chr5 (1-102)||(2024635-2024736)
chr5 (1-105)||(22986551-22986655)
chr5 (6-117)||(22648734-22648845)
chr5 (5-102)||(26718946-26719043)
chr5 (5-102)||(26988690-26988787)
chr5 (1-102)||(34756359-34756460)
chr5 (1-117)||(11242311-11242427)
chr5 (1-101)||(28822335-28822435)
chr5 (2-117)||(2530892-2531006)
chr5 (1-102)||(27079017-27079118)
chr5 (1-105)||(36187872-36187976)
chr5 (11-102)||(9364297-9364388)
chr5 (11-102)||(16198797-16198888)
chr5 (1-102)||(1366519-1366620)
chr5 (1-98)||(2274900-2274997)
chr5 (1-102)||(16592067-16592168)
chr5 (1-102)||(23284055-23284156)
chr5 (1-102)||(30854335-30854436)
chr5 (1-102)||(31194605-31194705)
chr5 (13-102)||(15480094-15480183)
chr5 (14-102)||(19523205-19523293)
chr5 (11-95)||(40389539-40389623)
chr5 (5-84)||(7338023-7338102)
chr5 (1-47)||(606215-606261)
chr5 (131-181)||(15639574-15639624)
chr5 (12-102)||(16799331-16799421)
chr5 (12-102)||(24395745-24395835)
chr5 (5-117)||(10543665-10543776)
chr5 (1-102)||(31881427-31881527)
chr5 (5-102)||(41911614-41911711)
chr5 (11-102)||(7670930-7671022)
chr5 (18-102)||(27924088-27924172)
chr5 (4-47)||(27530544-27530587)
chr5 (1-44)||(35080763-35080806)
chr5 (9-49)||(22875001-22875041)
chr5 (136-202)||(7079538-7079605)
chr5 (137-180)||(27924035-27924078)
chr5 (1-95)||(17344969-17345063)
chr5 (135-199)||(2024766-2024831)
chr5 (135-180)||(7670877-7670922)
chr5 (135-180)||(16198896-16198941)
chr5 (135-180)||(28822444-28822489)
chr5 (135-180)||(38869465-38869510)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-262)||(39929-40191)
scaffold0022 (4-262)||(137989-138251)
[»] chr7 (43 HSPs)
chr7 (1-181)||(27237418-27237597)
chr7 (51-262)||(17800266-17800477)
chr7 (1-102)||(2611257-2611358)
chr7 (5-102)||(9021799-9021896)
chr7 (5-117)||(6765680-6765792)
chr7 (6-102)||(36902924-36903020)
chr7 (3-181)||(7398379-7398556)
chr7 (1-102)||(29077226-29077327)
chr7 (1-105)||(18776761-18776865)
chr7 (4-102)||(48983842-48983940)
chr7 (1-102)||(8171534-8171635)
chr7 (1-181)||(23859001-23859180)
chr7 (4-102)||(20091279-20091377)
chr7 (1-115)||(36891571-36891685)
chr7 (12-117)||(20153192-20153297)
chr7 (1-94)||(38971267-38971359)
chr7 (11-105)||(10329415-10329509)
chr7 (5-91)||(21763586-21763672)
chr7 (4-102)||(38414874-38414972)
chr7 (1-102)||(10955490-10955591)
chr7 (13-102)||(12596294-12596383)
chr7 (9-102)||(24525688-24525781)
chr7 (1-117)||(12419490-12419606)
chr7 (4-96)||(23744808-23744900)
chr7 (1-84)||(26254017-26254100)
chr7 (3-117)||(12981317-12981431)
chr7 (1-102)||(8239693-8239794)
chr7 (19-102)||(9014782-9014858)
chr7 (1-102)||(19692100-19692201)
chr7 (1-181)||(23020479-23020656)
chr7 (29-102)||(23551094-23551167)
chr7 (1-178)||(18201069-18201244)
chr7 (1-102)||(47984964-47985066)
chr7 (5-61)||(9014177-9014233)
chr7 (131-205)||(26917806-26917881)
chr7 (5-84)||(33162338-33162417)
chr7 (4-102)||(28749716-28749813)
chr7 (135-180)||(20091385-20091430)
chr7 (68-102)||(25010439-25010473)
chr7 (135-180)||(23551175-23551220)
chr7 (135-180)||(25010386-25010431)
chr7 (135-180)||(38414980-38415025)
chr7 (135-180)||(48983948-48983993)
[»] chr1 (46 HSPs)
chr1 (1-120)||(45758493-45758612)
chr1 (1-104)||(38853537-38853640)
chr1 (1-207)||(5533223-5533431)
chr1 (5-178)||(38547035-38547207)
chr1 (1-181)||(39134717-39134897)
chr1 (5-120)||(43235767-43235884)
chr1 (1-102)||(5316697-5316798)
chr1 (1-102)||(23185444-23185545)
chr1 (1-102)||(44655758-44655859)
chr1 (5-181)||(26803888-26804059)
chr1 (11-102)||(27559654-27559745)
chr1 (1-105)||(33170773-33170877)
chr1 (1-102)||(5027566-5027667)
chr1 (9-102)||(9173026-9173119)
chr1 (9-102)||(9181008-9181101)
chr1 (1-102)||(14146317-14146418)
chr1 (1-102)||(41697132-41697233)
chr1 (1-102)||(50881447-50881548)
chr1 (11-102)||(17168973-17169064)
chr1 (1-102)||(10925948-10926050)
chr1 (1-102)||(3406435-3406536)
chr1 (1-102)||(3440284-3440385)
chr1 (5-102)||(4971617-4971714)
chr1 (13-98)||(6771812-6771897)
chr1 (13-102)||(16140072-16140161)
chr1 (12-101)||(40501796-40501885)
chr1 (6-98)||(1366878-1366970)
chr1 (1-84)||(6889646-6889729)
chr1 (1-84)||(6891492-6891575)
chr1 (1-98)||(21740932-21741029)
chr1 (1-102)||(50146313-50146414)
chr1 (5-117)||(6221680-6221791)
chr1 (11-102)||(19955734-19955825)
chr1 (1-102)||(51607434-51607536)
chr1 (1-94)||(35392295-35392387)
chr1 (1-47)||(17322618-17322664)
chr1 (135-180)||(1366982-1367027)
chr1 (135-180)||(9173127-9173172)
chr1 (135-180)||(13913586-13913631)
chr1 (4-47)||(22865459-22865502)
chr1 (1-47)||(27906724-27906770)
chr1 (135-180)||(9181109-9181154)
chr1 (135-180)||(19955681-19955726)
chr1 (135-180)||(27559601-27559646)
chr1 (135-180)||(44895616-44895661)
chr1 (136-180)||(17168920-17168964)
[»] chr2 (38 HSPs)
chr2 (1-119)||(16096996-16097114)
chr2 (1-181)||(38400725-38400904)
chr2 (5-181)||(11912757-11912933)
chr2 (1-102)||(6965012-6965113)
chr2 (1-102)||(12337444-12337545)
chr2 (1-102)||(21665696-21665797)
chr2 (1-102)||(28425706-28425807)
chr2 (1-102)||(29939858-29939959)
chr2 (1-117)||(24035541-24035657)
chr2 (1-105)||(8907075-8907179)
chr2 (1-102)||(9046034-9046136)
chr2 (1-102)||(3155222-3155323)
chr2 (1-102)||(4505899-4506000)
chr2 (5-102)||(10762565-10762662)
chr2 (5-181)||(16227368-16227543)
chr2 (9-102)||(24410442-24410535)
chr2 (4-117)||(12134039-12134152)
chr2 (5-86)||(42029166-42029247)
chr2 (1-102)||(26716133-26716235)
chr2 (1-91)||(34693991-34694081)
chr2 (1-91)||(34716403-34716493)
chr2 (4-179)||(13800543-13800718)
chr2 (38-181)||(37182597-37182739)
chr2 (1-81)||(40636164-40636244)
chr2 (11-102)||(27506746-27506837)
chr2 (1-102)||(7162789-7162890)
chr2 (1-116)||(7742129-7742245)
chr2 (5-61)||(11952588-11952643)
chr2 (1-45)||(22727453-22727497)
chr2 (13-102)||(3953011-3953100)
chr2 (33-120)||(22727530-22727617)
chr2 (140-181)||(10252334-10252375)
chr2 (5-89)||(10252431-10252518)
chr2 (135-180)||(27506845-27506890)
chr2 (135-181)||(29694311-29694357)
chr2 (1-81)||(5952713-5952791)
chr2 (135-180)||(8327618-8327663)
chr2 (1-34)||(44914899-44914932)
[»] chr4 (64 HSPs)
chr4 (1-117)||(52468282-52468398)
chr4 (1-180)||(36118453-36118630)
chr4 (1-181)||(39329387-39329566)
chr4 (1-102)||(54780788-54780889)
chr4 (1-105)||(32128592-32128696)
chr4 (1-102)||(2790736-2790837)
chr4 (1-102)||(10978911-10979012)
chr4 (1-102)||(43455526-43455627)
chr4 (1-102)||(47128998-47129099)
chr4 (7-181)||(36178606-36178778)
chr4 (1-102)||(16845032-16845134)
chr4 (5-102)||(38209590-38209687)
chr4 (1-117)||(27112026-27112142)
chr4 (1-105)||(48209248-48209352)
chr4 (11-102)||(34027590-34027681)
chr4 (16-102)||(5128852-5128938)
chr4 (1-99)||(36362866-36362964)
chr4 (12-102)||(37777229-37777319)
chr4 (4-86)||(39655252-39655334)
chr4 (18-181)||(40217163-40217327)
chr4 (1-98)||(10041995-10042092)
chr4 (1-102)||(24396945-24397046)
chr4 (1-102)||(32915396-32915497)
chr4 (1-102)||(34768569-34768670)
chr4 (5-102)||(35779325-35779421)
chr4 (1-181)||(15735029-15735202)
chr4 (135-230)||(30507200-30507296)
chr4 (13-101)||(37514671-37514759)
chr4 (1-98)||(51691910-51692009)
chr4 (1-84)||(16922324-16922407)
chr4 (29-181)||(4167914-4168066)
chr4 (13-118)||(37744916-37745022)
chr4 (4-102)||(54083240-54083338)
chr4 (13-102)||(1105543-1105632)
chr4 (9-102)||(2135324-2135417)
chr4 (14-99)||(13460221-13460306)
chr4 (1-46)||(30507117-30507162)
chr4 (1-102)||(35465118-35465218)
chr4 (1-102)||(19498515-19498614)
chr4 (135-264)||(22077034-22077164)
chr4 (5-47)||(24614019-24614061)
chr4 (135-181)||(37746849-37746895)
chr4 (29-102)||(40089527-40089600)
chr4 (1-81)||(17679432-17679512)
chr4 (11-82)||(10428202-10428273)
chr4 (1-47)||(9578659-9578705)
chr4 (135-180)||(16844979-16845024)
chr4 (131-176)||(29425297-29425342)
chr4 (135-180)||(35465065-35465110)
chr4 (135-180)||(38352359-38352404)
chr4 (9-101)||(45656187-45656279)
chr4 (4-95)||(16882393-16882484)
chr4 (133-180)||(16882497-16882544)
chr4 (133-180)||(37777325-37777372)
chr4 (131-181)||(2135442-2135492)
chr4 (68-102)||(24969448-24969482)
chr4 (1-47)||(55255323-55255369)
chr4 (135-180)||(19498462-19498507)
chr4 (11-59)||(23508515-23508564)
chr4 (135-180)||(32128542-32128587)
chr4 (135-180)||(34027537-34027582)
chr4 (135-180)||(40089474-40089519)
chr4 (1-84)||(51964737-51964823)
chr4 (136-180)||(54083347-54083391)
[»] scaffold1590 (1 HSPs)
scaffold1590 (2-101)||(255-354)
[»] chr6 (24 HSPs)
chr6 (12-181)||(20611721-20611889)
chr6 (3-117)||(21183673-21183787)
chr6 (1-102)||(13727395-13727496)
chr6 (1-102)||(20711716-20711817)
chr6 (1-102)||(21479503-21479604)
chr6 (1-102)||(21280554-21280655)
chr6 (1-102)||(27788684-27788785)
chr6 (1-102)||(33774126-33774227)
chr6 (1-117)||(2477580-2477696)
chr6 (5-102)||(1155849-1155946)
chr6 (8-117)||(6159432-6159541)
chr6 (1-102)||(19737688-19737789)
chr6 (13-102)||(24711007-24711096)
chr6 (11-102)||(28075792-28075883)
chr6 (11-101)||(17353964-17354054)
chr6 (1-102)||(34397866-34397967)
chr6 (5-90)||(30121783-30121868)
chr6 (29-165)||(4036895-4037030)
chr6 (13-102)||(30832532-30832621)
chr6 (11-105)||(235230-235326)
chr6 (135-180)||(19987117-19987162)
chr6 (1-84)||(27314174-27314258)
chr6 (72-108)||(27994772-27994808)
chr6 (135-180)||(27788793-27788838)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-102)||(106544-106645)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-102)||(206489-206586)
[»] scaffold0182 (1 HSPs)
scaffold0182 (5-117)||(23993-24105)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-181)||(230855-231034)
[»] scaffold0097 (1 HSPs)
scaffold0097 (9-117)||(38916-39024)
[»] scaffold1320 (2 HSPs)
scaffold1320 (1-116)||(1346-1461)
scaffold1320 (134-181)||(1284-1331)
[»] scaffold0018 (1 HSPs)
scaffold0018 (10-115)||(173515-173620)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-102)||(1349-1450)
[»] scaffold0003 (1 HSPs)
scaffold0003 (31-90)||(351360-351419)
[»] scaffold0227 (2 HSPs)
scaffold0227 (71-117)||(16018-16064)
scaffold0227 (12-47)||(16126-16161)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-63)||(183105-183155)


Alignment Details
Target: chr8 (Bit Score: 146; Significance: 6e-77; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 34789858 - 34790113
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34789858 tttaaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatg 34789957  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    ||||||||||||||||||||          ||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||    
T  34789958 agaaatatcaaaccaccatc-ctaaaaaaacacccacctaacaccaaaagtaagatgacccaattctaatatgcctaaaattagacaacataaaaggaaa 34790056  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataatttt 256  Q
    ||||||||||| ||| |||||| |||||||||| ||||| || ||| ||||||||||    
T  34790057 gtgaaaacctaaggagtagtggggcagtacttagtactactattgggctataatttt 34790113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11290291 - 11290031
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  11290291 tttaaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatg 11290192  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    || ||  |||||||||||||          ||  ||||||| |||||||| || | ||||||||||||||||||||||||| || ||||| |||||||||    
T  11290191 agcaacctcaaaccaccatc-ccaacaaaacatccacctaataccaaaagcaacaggacccaattctaataggcctaaaacaagacaacagaaaaggaaa 11290093  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataattttatttt 261  Q
    ||| |||| | ||||  |||||   |||||||| || || |||| |||||||||||| ||||    
T  11290092 gtggaaacgtggggagaagtgggatagtacttagtagtactactcgactataattttttttt 11290031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 5973103 - 5973356
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||| || ||||||||| ||||||||||| |    
T  5973103 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacg 5973202  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    || ||  ||||||||||||           || | ||||||||||||||| || |||| ||||||||||||| |||||||| || ||||| ||||| |||    
T  5973203 aggaacctcaaaccaccat---aaaaaaaacattgacctaacaccaaaagcaagatgatccaattctaatagacctaaaacaagacaacagaaaagaaaa 5973299  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataatttt 256  Q
    ||| ||||||  |||||||||| | ||||||||||| || |||||  ||||||||||    
T  5973300 gtggaaacctgaggaatagtggggtagtacttaataatactactgagctataatttt 5973356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 7944518 - 7944731
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  7944518 tttaaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatg 7944617  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    || ||  |||||||||||||          ||| |||||||||||||||| || | ||| ||||| ||||||||||||||| || ||| | |||||||||    
T  7944618 aggaacctcaaaccaccatc-ccaaaaaaacacccacctaacaccaaaagcaagaggacacaattttaataggcctaaaacaagacaatagaaaaggaaa 7944716  T
Q  200 gtgaaaacctaggga 214  Q
    ||| |||||| ||||    
T  7944717 gtggaaacctgggga 7944731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 15167411 - 15167588
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||   | |||||||| ||||||||||||| ||||||||||    
T  15167411 tttaaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatg 15167510  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| |            || ||||||||||||||||||| | |||||||||||||||||||||||||    
T  15167511 aggaacctcaaaccaccct---tccaaaaaaacccacctaacaccaaaagtaagaggacccaattctaataggcctaaaac 15167588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 41677169 - 41677367
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||   ||||||||||||   | || | |||||||||||||||||| ||||||||    
T  41677169 tttaaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacat 41677268  T
Q  100 gagaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaa 198  Q
    ||| ||  |||||||||| ||          ||| |||||||||||||||| || | ||||| ||||||||||||||||||| || |||||||| |||||    
T  41677269 gaggaacctcaaaccaccctc--caaaaaaacacccacctaacaccaaaagcaagaggacccgattctaataggcctaaaacaagacaacataagaggaa 41677366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30883436 - 30883335
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  30883436 tttaaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 30883337  T
Q  101 ag 102  Q
    ||    
T  30883336 ag 30883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45475924 - 45475823
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  45475924 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatg 45475825  T
Q  101 ag 102  Q
    ||    
T  45475824 ag 45475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8646312 - 8646209
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||||||||   | ||| |||| |||||||||||||||||||||||     
T  8646312 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatg-catacacgcaaatgtgaaaatcactaccgtatacata 8646214  T
Q  101 agaaa 105  Q
    |||||    
T  8646213 agaaa 8646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 39332405 - 39332517
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||| | ||| ||||||||||||||| | ||| |||||| |  || || |||||||||||||||||||||||||||||||| |    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  105 atatcaaaccacc 117  Q
    |  ||||||||||    
T  39332505 acctcaaaccacc 39332517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41879288 - 41879184
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| |   ||||||||||  || || |||||||||||||| ||||||| |||||||    
T  41879288 tttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatg 41879189  T
Q  101 agaaa 105  Q
    |||||    
T  41879188 agaaa 41879184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 34048705 - 34048878
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgt-tg-tgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| | || | ||||||||| ||||||||||||| |||||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T
Q  103 aaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggccta 177  Q
     |   ||| |||||| ||          ||||||||||||||||||||||||||| | | |||||||||||||||    
T  34048805 gatcctcataccaccctc-caaaaaaaacactcacctaacaccaaaagtaaaatggctcgattctaataggccta 34048878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 2952220 - 2952318
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 2952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13534683 - 13534783
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  13534683 tttaaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 13534781  T
Q  101 ag 102  Q
    ||    
T  13534782 ag 13534783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13624223 - 13624323
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  13624223 tttaaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 13624321  T
Q  101 ag 102  Q
    ||    
T  13624322 ag 13624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23606625 - 23606726
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||| ||||| |||||||||||||||    
T  23606625 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatg 23606724  T
Q  101 ag 102  Q
    ||    
T  23606725 ag 23606726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42600889 - 42600788
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| | ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || ||||||||||||||||| |||||||||||||||    
T  42600889 tttaaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatg 42600790  T
Q  101 ag 102  Q
    ||    
T  42600789 ag 42600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 5860744 - 5860844
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| ||||||||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T
Q  105 a 105  Q
    |    
T  5860844 a 5860844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15078865 - 15078750
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||| |||||||||||||||  |||||||||||||||| || | |  ||||||||| | | |||||||| ||||||||||||| ||||||||||    
T  15078865 tttaaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatg 15078766  T
Q  101 agaaatatcaaaccac 116  Q
    || ||  |||||||||    
T  15078765 aggaacctcaaaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 14509983 - 14510097
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtg-aaaatcactaccgtatacatgaga 103  Q
    |||||||||||||| |||||||| |||||||||| ||||| || | |||||||||| |  || |||||||| ||| |||||||||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatatacg--gtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  104 aatatcaaaccaccatc 120  Q
    ||  |||||||||||||    
T  14510081 aacctcaaaccaccatc 14510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 23798261 - 23798358
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 23798358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 5942775 - 5942687
Alignment:
Q  29 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 117  Q
    |||||||||||||||||||   ||||||||| ||  || ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  5942775 ttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 5942687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 8103018 - 8102918
Alignment:
Q  2 ttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||| || |||||| ||||||||| ||||||||||||||||||| | |  |||||||||  || |||| |||||||||||||| ||||||||||||||    
T  8103018 ttaaaataataatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatga 8102919  T
Q  102 g 102  Q
    |    
T  8102918 g 8102918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 10917495 - 10917397
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||| ||||||||||    
T  10917495 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 30674403 - 30674485
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcac 87  Q
    ||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||   | ||| ||||||||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 25561496 - 25561605
Alignment:
Q  6 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaa 105  Q
    ||||| ||||||||||||||||||||| |||||||||||||| | | ||||||||||  |   ||||||| |||||||||||| ||||||||||||| ||    
T  25561496 aagaataatgttctatttaaatctttt-aaagataaatacaaggtgccgtatatatg-cgataacccaaatgtgaaaatcactgccgtatacatgaggaa 25561593  T
Q  106 tatcaaaccacc 117  Q
      ||||||||||    
T  25561594 cctcaaaccacc 25561605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37430154 - 37430255
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||| | |||| ||||| |||||||||||||||    
T  37430154 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatg 37430253  T
Q  101 ag 102  Q
    ||    
T  37430254 ag 37430255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 5721654 - 5721550
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaa 112  Q
    ||||||||||||| | ||||||||||||||||||| | | | ||||||    || |||||||| ||||||||||||||||||||| |||| ||  |||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  113 ccacc 117  Q
    |||||    
T  5721554 ccacc 5721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 9108596 - 9108554
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaa 9108554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 25561631 - 25561681
Alignment:
Q  131 cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||||||| || | |||||||||||||||||||||||||    
T  25561631 cactcacctaacaccaaaagcaagaggacccaattctaataggcctaaaac 25561681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3048513 - 3048610
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    ||||||||| |||| | ||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | || ||||||| |||||||||||||    
T  3048513 tttaaaagagcaatatactatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtataca 3048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 15078735 - 15078688
Alignment:
Q  134 tcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||    
T  15078735 tcacctaacaccaaaagtaagaggacccaattctaacaggcctaaaac 15078688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38009148 - 38009191
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaata 44  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  38009148 tttaaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 23941095 - 23941173
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcac 87  Q
    ||||||||| ||||||||| ||||||||||||||||||| | ||| |||||| |   | ||||||||| ||||||||||    
T  23941095 aacaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcac 23941173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 34868177 - 34868219
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  34868177 aaagaataatgttctatttaaattttttaaaagataaatacaa 34868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 8646174 - 8646109
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    |||||||||||||||| || |||||| ||||| |||||||||||||| || |||||||| ||||||    
T  8646174 cacctaacaccaaaagcaagatgacctaattcgaataggcctaaaacaagacaacataagaggaaa 8646109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 10917389 - 10917344
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  10917389 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 10917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 8102888 - 8102845
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaa 178  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  8102888 cacctaacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 23606734 - 23606779
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  23606734 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 23606779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 23798366 - 23798411
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  23798366 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 23798411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 42600780 - 42600735
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  42600780 cacctaacaccaaaagcaagaagacctaattctaataggcctaaaa 42600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 38009203 - 38009239
Alignment:
Q  69 acccaaaggtgaaaatcactaccgtatacatgagaaa 105  Q
    |||||||||||||||| |||||| |||||||||||||    
T  38009203 acccaaaggtgaaaattactaccatatacatgagaaa 38009239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 49393195 - 49392941
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||| |    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag-a 49393098  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtga 203  Q
    |  ||||| |||||||           |||||||||||||||||||||| | |||| |||||||||||||||||||| || ||||  |||||||| |||     
T  49393097 acctcaaatcaccatcccaaaaaaat-actcacctaacaccaaaagtaagaggacctaattctaataggcctaaaacaagacaacggaaaaggaatgtgg 49392999  T
Q  204 aaacctagggaatagtggagcagtacttaatactaatactggactataattttatttt 261  Q
    |||||| ||||  ||||| |||||||||| || || |||||| |||||||||| ||||    
T  49392998 aaacctggggaggagtggggcagtacttagtagtactactgggctataattttttttt 49392941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8420436 - 8420176
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| | | |||||||||||||| |||||||| |||||||||||| ||||||| | |    
T  8420436 tttaaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacg 8420337  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    || ||  ||||||||||||           ||| |||||||||||||||| || |  |||||||||||||| ||||||||  || ||||| |||||||||    
T  8420336 aggaacctcaaaccaccat-tccaaaaaaacacccacctaacaccaaaagcaagagaacccaattctaatatgcctaaaataagacaacagaaaaggaaa 8420238  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataattttatttt 261  Q
    ||| |||||| | || |||||| | |||||||| || |  || ||| |||||||||| ||||    
T  8420237 gtggaaacctggagagtagtggggtagtacttagtagtcctattgggctataattttttttt 8420176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25855527 - 25855435
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtataca 25855435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 790042 - 789841
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    |||||||||| |||||||||||| |||||||  |||||||||| | ||| |||||||||||| ||||||||||| |||||||| ||| |||||||||| |    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtga 203  Q
    |  ||||||||||| |          |||||| ||||||| |||||||| | ||||||||||||| ||||||||||| || ||||  ||||||||||||     
T  789942 acctcaaaccaccaac-ccaaaaaaacactcatctaacacaaaaagtaagaggacccaattctaa-aggcctaaaacaagacaaccgaaaaggaaagtgg 789845  T
Q  204 aaac 207  Q
    ||||    
T  789844 aaac 789841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 26279652 - 26279471
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcact--accgtataca 98  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||   | ||||||||| |||||||||||  ||  ||||||    
T  26279652 tttaaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattataca 26279553  T
Q  99 tgagaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||| ||  |||||||||| ||          ||| |||||||||||||||| || ||||||||||| |||||||||||||||    
T  26279552 tgaggaacctcaaaccaccctc-ccaaaaaaacacccacctaacaccaaaagcaacatgacccaattttaataggcctaaaac 26279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8073334 - 8073435
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||||| |||||||| |||||||||||||||    
T  8073334 tttaaaagagtaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatg 8073433  T
Q  101 ag 102  Q
    ||    
T  8073434 ag 8073435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21582881 - 21582780
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  21582881 tttaaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 21582782  T
Q  101 ag 102  Q
    ||    
T  21582781 ag 21582780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37168477 - 37168376
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||| ||  |||||||||||||||| |||||||||||||||    
T  37168477 tttaaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatg 37168378  T
Q  101 ag 102  Q
    ||    
T  37168377 ag 37168376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54619199 - 54619300
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  54619199 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 54619298  T
Q  101 ag 102  Q
    ||    
T  54619299 ag 54619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27078565 - 27078669
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||||| |||||||||| |||||||||||||||    
T  27078565 tttaaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatg 27078664  T
Q  101 agaaa 105  Q
    |||||    
T  27078665 agaaa 27078669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27084362 - 27084466
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||||| |||||||||| |||||||||||||||    
T  27084362 tttaaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatg 27084461  T
Q  101 agaaa 105  Q
    |||||    
T  27084462 agaaa 27084466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 53506880 - 53506984
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| |||||||||||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  53506880 tttaaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 53506979  T
Q  101 agaaa 105  Q
    |||||    
T  53506980 agaaa 53506984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 54574823 - 54575023
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| |   ||||||||||  || |||||||| || |||||||||||| ||||||||    
T  54574823 tttaaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatg 54574922  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac-tagcaacataaaaggaaa 199  Q
    || ||  ||||||| || ||          ||| ||||||||| ||||||||| ||||| ||||||||||| |||||||||  | ||||| |||||||||    
T  54574923 aggaacctcaaaccgccctc-ccaaaaaaacacccacctaacaacaaaagtaagatgactcaattctaatatgcctaaaacaaaacaacaaaaaaggaaa 54575021  T
Q  200 gt 201  Q
    ||    
T  54575022 gt 54575023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3953892 - 3953993
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |  ||||||||||||    
T  3953892 tttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatg 3953991  T
Q  101 ag 102  Q
    ||    
T  3953992 ag 3953993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 28689357 - 28689535
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| || |||||||||||||||| ||  ||||||||||||||| | | ||||||||||   |  | |||||||||||||||||| |||||||||||    
T  28689357 tttaaaaaaagaatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatg 28689456  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||| |||||| ||| ||          ||| |||||||||||||||| || |||| ||||||||||||||| ||||||    
T  28689457 agaaatctcaaactaccctc--ccaaaaaacacccacctaacaccaaaagcaagatgatccaattctaataggcttaaaac 28689535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34290632 - 34290733
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| ||||||||||| |||    
T  34290632 tttaaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatg 34290731  T
Q  101 ag 102  Q
    ||    
T  34290732 ag 34290733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 32319155 - 32319239
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcacta 89  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||  || ||||||||||||||||| ||||    
T  32319155 aaagaataatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattacta 32319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38681089 - 38681190
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||| ||||  || || ||| |||||||||| |||||||||||||||    
T  38681089 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatg 38681188  T
Q  101 ag 102  Q
    ||    
T  38681189 ag 38681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 54407157 - 54407252
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| ||||||||||||||    
T  54407157 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 44708576 - 44708486
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||| || |||||||||||||||| || | | |||||||||   || ||||||||||||||||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgag 44708486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36716021 - 36716122
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||  || ||||||||| ||    
T  36716021 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtg 36716120  T
Q  101 ag 102  Q
    ||    
T  36716121 ag 36716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42098911 - 42098810
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  || || |||||||||| |||||||||||||||    
T  42098911 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatg 42098812  T
Q  101 ag 102  Q
    ||    
T  42098811 ag 42098810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43207234 - 43207334
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||  ||||||||||||| |||||||||||||||    
T  43207234 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatg 43207332  T
Q  101 ag 102  Q
    ||    
T  43207333 ag 43207334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 47467782 - 47467693
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||||| |||||||||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgag 47467693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18372593 - 18372488
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat----gttgtgcacccaaaggtgaaaatcactaccgtata 96  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||    |  || ||| || |||||||||| |||||||||||    
T  18372593 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtata 18372494  T
Q  97 catgag 102  Q
    ||||||    
T  18372493 catgag 18372488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 50939239 - 50939330
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||| | || ||||||||||| ||||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9878683 - 9878781
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||| |||| ||||||||| || |||||||||||||||| || | |  |||||||||  || ||||||||||||||||| |||| |||||||||    
T  9878683 tttaaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacat 9878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42453514 - 42453453
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 62  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| | ||| ||||||||    
T  42453514 tttaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 42453453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 53149310 - 53149411
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || || | ||||| |||||||||||||||    
T  53149310 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatg 53149409  T
Q  101 ag 102  Q
    ||    
T  53149410 ag 53149411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 52374766 - 52374666
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||   | |||||||||| | |||||||| |||   | || | ||||| ||||||||||||||||||||||    
T  52374766 tttaaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatg 52374667  T
Q  101 a 101  Q
    |    
T  52374666 a 52374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36606075 - 36605974
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaa-gataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||| ||| |||||||||||||| || |||||||| ||||||||||| | | ||||||||||  || |||||| || ||||||| ||||||||||||||    
T  36606075 tttaatagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacat 36605977  T
Q  100 gag 102  Q
    |||    
T  36605976 gag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23641314 - 23641375
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 62  Q
    |||||||||||||  ||||||||| || ||||||||||||||||||| | ||||||||||||    
T  23641314 tttaaaagaacaacattctatttatattttttaaaagataaatacaatgtgtcgtatatatg 23641375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 29598085 - 29598039
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||| || |||||| ||||||||||||||||||||    
T  29598085 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaac 29598039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 44708478 - 44708433
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  44708478 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 44708433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 52374635 - 52374570
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||| || ||||| |||||||||    
T  52374635 cacctaacaccaaaagcaagaggactcaattctaataggcctaaaacaagacaacagaaaaggaaa 52374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 36179629 - 36179704
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtgaaaacct 209  Q
    ||||| |||||||||| || | || |||||||||||||||| ||||| || |||||||||||||||| | ||||||    
T  36179629 cacctgacaccaaaagcaagaggatccaattctaataggccgaaaacaagacaacataaaaggaaagcggaaacct 36179704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 42453386 - 42453343
Alignment:
Q  138 ctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||| | ||| |||||||||||||||||||||    
T  42453386 ctaacaccaaaagtaagaggactcaattctaataggcctaaaac 42453343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 50939340 - 50939383
Alignment:
Q  137 cctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||| |||| |||| |||||||||||||||||||    
T  50939340 cctaacaccaaaagcaaaaggacctaattctaataggcctaaaa 50939383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 50258622 - 50258680
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 62  Q
    |||||| | |||||||||||| || |||||||| |||||||||| | ||||||||||||    
T  50258622 aaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatg 50258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 43207342 - 43207387
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  43207342 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 43207387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 53506989 - 53507034
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  53506989 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 53507034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 54407262 - 54407307
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  54407262 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 54407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36868869 - 36868985
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  36868869 tttaaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatg 36868968  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||| ||||||||||    
T  36868969 aggaatctcaaaccacc 36868985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 10407568 - 10407314
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| | |||||| ||||||||| || | ||| |||||||| |||||||||| ||||    
T  10407568 tttaaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatg 10407469  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaa---agtaaaatgacccaattctaataggcctaaaactag-caacataaaagg 196  Q
    || ||| || ||||||||||          || ||| |||||||||||   || || | ||||||||||||||||||||||||| || ||||| ||||||    
T  10407468 aggaatctccaaccaccatc-ccaaaaaaacattcatctaacaccaaaaggagcaagaggacccaattctaataggcctaaaacaagacaacagaaaagg 10407370  T
Q  197 aaagtgaaaacctagggaatagtggagcagtacttaatactaatactggactataa 252  Q
    |||||| ||||||  | | |||||| |||||||||| || || |||||||||||||    
T  10407369 aaagtggaaacctgagaagtagtggggcagtacttagtagtactactggactataa 10407314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33037887 - 33037768
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    ||||||||||||||| |||||||||||||||| || |||||||||||||    
T  33037887 tttaaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatg 33037788  T
Q  101 agaaatatcaaaccaccatc 120  Q
    || ||  |||||||||||||    
T  33037787 aggaacctcaaaccaccatc 33037768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 34426010 - 34425831
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| | | |||||||||||  | |||| |||| | ||||||| |||||||||||||    
T  34426010 tttaaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatg 34425911  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| ||          |||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  34425910 aggaacctcaaaccaccctc-ccaaaaaaacactcacctaacaccaaaagcaagaggactcaattctaataggcctaaaac 34425831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 2412191 - 2412079
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||   |||| ||||| |||||||||||||| ||||||||||| |    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  105 atatcaaaccacc 117  Q
    |  ||||||||||    
T  2412091 acctcaaaccacc 2412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 14318382 - 14318494
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||  | || |||||  ||||||||||||||||||||||||| |    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  105 atatcaaaccacc 117  Q
    |  ||||||||||    
T  14318482 acctcaaaccacc 14318494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38869356 - 38869460
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||    
T  38869356 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 38869455  T
Q  101 agaaa 105  Q
    |||||    
T  38869456 agaaa 38869460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 40794320 - 40794497
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||| | |||| |||| |  | |||| ||||||||||||||||||||||||||||    
T  40794320 tttaaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatg 40794419  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||  |||||||||| |           ||   |||||||||||||||||| | ||||||||||||||| |||||||||    
T  40794420 agaaacctcaaaccaccctaaaaaaaacatca---acctaacaccaaaagtaagaggacccaattctaataagcctaaaac 40794497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2024635 - 2024736
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| | | |||||||||||  | ||||||||| |||||||||||||| ||||||||    
T  2024635 tttaaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatg 2024734  T
Q  101 ag 102  Q
    ||    
T  2024735 ag 2024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22986551 - 22986655
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||| | || |||||||||| |||||||||| ||||||||||||  || |||||| |||||||||| |||||||||||||||    
T  22986551 tttaaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatg 22986650  T
Q  101 agaaa 105  Q
    |||||    
T  22986651 agaaa 22986655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 22648734 - 22648845
Alignment:
Q  6 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaa 105  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |  || |||||||||| ||||||||| ||||| || |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaa 22648833  T
Q  106 tatcaaaccacc 117  Q
      ||||||||||    
T  22648834 cctcaaaccacc 22648845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 26718946 - 26719043
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||   | ||| ||||||||||||||||||||| |||||||||    
T  26718946 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 26988690 - 26988787
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||   | ||| ||||||||||||||||||||| |||||||||    
T  26988690 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34756359 - 34756460
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  34756359 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 34756458  T
Q  101 ag 102  Q
    ||    
T  34756459 ag 34756460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11242311 - 11242427
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||  |  ||||||||||  | || |||||| || ||||||||||||||||||||    
T  11242311 tttaaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatg 11242410  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||  ||||||||||    
T  11242411 aggaacctcaaaccacc 11242427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28822335 - 28822435
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  28822335 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 28822434  T
Q  101 a 101  Q
    |    
T  28822435 a 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 2530892 - 2531006
Alignment:
Q  2 ttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||| | |||||||||||   || || |||||||||||||||||||| ||||||||||    
T  2530892 ttaaaagaa-aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatga 2530990  T
Q  102 gaaatatcaaaccacc 117  Q
    | ||  ||||||||||    
T  2530991 ggaacctcaaaccacc 2531006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27079118 - 27079017
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||||||||||| ||||| |||||||||    
T  27079118 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatg 27079019  T
Q  101 ag 102  Q
    ||    
T  27079018 ag 27079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36187872 - 36187976
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || |||||||| |||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  36187872 tttaaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 36187971  T
Q  101 agaaa 105  Q
    |||||    
T  36187972 agaaa 36187976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 9364388 - 9364297
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9364297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 16198797 - 16198888
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||   | ||||||||||||||||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 16198888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1366519 - 1366620
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||   || |||||||||   | |||| ||| |||||||||||||||||||| |||    
T  1366519 tttaaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatg 1366618  T
Q  101 ag 102  Q
    ||    
T  1366619 ag 1366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2274997 - 2274900
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||||| |||||||||| |||||||||||||    
T  2274997 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtataca 2274900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16592067 - 16592168
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || || |||||||||||||||  | ||||||||||||  || |||||| |||||||||| ||||||||||| |||    
T  16592067 tttaaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatg 16592166  T
Q  101 ag 102  Q
    ||    
T  16592167 ag 16592168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23284055 - 23284156
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||   ||||||||| | ||||||||||||  || ||||||||| ||||||| |||||||||||||||    
T  23284055 tttaaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatg 23284154  T
Q  101 ag 102  Q
    ||    
T  23284155 ag 23284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30854436 - 30854335
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || |||||||||| |||| ||||||||||    
T  30854436 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatg 30854337  T
Q  101 ag 102  Q
    ||    
T  30854336 ag 30854335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31194605 - 31194705
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  ||||| |||||||||| |||||||||||||||    
T  31194605 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatg 31194703  T
Q  101 ag 102  Q
    ||    
T  31194704 ag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 15480094 - 15480183
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || |||||||||||||||||||   ||||||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgag 15480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 19523293 - 19523205
Alignment:
Q  14 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| ||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 19523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 40389539 - 40389623
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 95  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || || |||||||||||||| ||||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtat 40389623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7338102 - 7338023
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| ||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 606261 - 606215
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  606261 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaa 606215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 15639624 - 15639574
Alignment:
Q  131 cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  15639624 cactcacctaacaccaaaagtaagaggacccaattctaataggcctaaaac 15639574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 16799331 - 16799421
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||| || |||||||| ||||||| || | | ||||||||||  || ||||||||||||||||| | |||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 16799421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 24395835 - 24395745
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| ||||||||||||||||||| | || ||||||||    | || ||||||||||||||||| |||||||| |||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgag 24395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10543776 - 10543665
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    |||||| ||||||| | |||||| |||||||||||||||| || | |  |||||||||   | || ||||||||||||||||||||||||||||| || |    
T  10543776 aaagaataatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-agga 10543678  T
Q  105 atatcaaaccacc 117  Q
    || ||||||||||    
T  10543677 atctcaaaccacc 10543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 31881427 - 31881527
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||  | | ||||||||||  |  || ||| || ||||||| |||||||||||||||    
T  31881427 tttaaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatg 31881525  T
Q  101 ag 102  Q
    ||    
T  31881526 ag 31881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 41911614 - 41911711
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| | |||| | |||||||||| |||||||| | |||||||||| |  || |||||||| || |||||||||| |||||| |||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgag 41911711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 7671022 - 7670930
Alignment:
Q  11 caatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||| |||||||||||| || | | ||||||| |   || ||||||||||||||||| |||||||||||||||||    
T  7671022 caatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 27924172 - 27924088
Alignment:
Q  18 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||| ||||| |||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 27530587 - 27530544
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaa 27530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35080763 - 35080806
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaata 44  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  35080763 tttaaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 22875041 - 22875001
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaag 49  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  22875041 aacaatattctatttaaattttttaaaagataaatacaaag 22875001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 7079605 - 7079538
Alignment:
Q  136 acctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtg 202  Q
    |||||||| |||||| || |||||| |||||||||||| ||||||| || ||||| ||||||||||||    
T  7079605 acctaacatcaaaagcaagatgacctaattctaataggtctaaaacaagacaacaaaaaaggaaagtg 7079538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 27924078 - 27924035
Alignment:
Q  137 cctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||| |||| |||| |||||||||||||||||||    
T  27924078 cctaacaccaaaagcaaaaggacctaattctaataggcctaaaa 27924035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17345063 - 17344969
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 95  Q
    ||||||| ||||||||||||||||||| ||||| |  ||||||||||   ||| | ||||||  || ||||||||| | ||||| ||||||||||    
T  17345063 tttaaaataacaatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 2024766 - 2024831
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    |||||||||||||||| || | ||| ||||||||||| ||||||||| || |||||||| ||||||    
T  2024766 cacctaacaccaaaagcaagaggactcaattctaatatgcctaaaacaagacaacataagaggaaa 2024831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 7670922 - 7670877
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  7670922 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 7670877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 16198896 - 16198941
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  16198896 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 16198941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 28822444 - 28822489
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  28822444 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 28822489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 38869465 - 38869510
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  38869465 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 38869510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 262
Target Start/End: Complemental strand, 40191 - 39929
Alignment:
Q  4 aaaagaacaatgttctatttaaatctttt--aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||| | | ||||| |||||||| ||||| |||||||||||||| | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  102 gaaatatcaaaccaccatcnnnnnnnnnn-cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    | ||  |||||||||| ||           ||  |||||||||| ||||| || | ||||||||||||||||||||||||| || ||||| |||| ||||    
T  40091 gcaacctcaaaccaccgtcccaaaaaaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcctaaaacaagacaacagaaaaagaaa 39992  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataattttattttt 262  Q
    ||| |||||| ||||||||||||| |||||||| || || || | |||||||||||| |||||    
T  39991 gtggaaacctggggaatagtggagtagtacttagtagtactaatagactataatttttttttt 39929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 262
Target Start/End: Complemental strand, 138251 - 137989
Alignment:
Q  4 aaaagaacaatgttctatttaaatctttt--aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||| | | ||||| |||||||| ||||| |||||||||||||| | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  102 gaaatatcaaaccaccatcnnnnnnnnnn-cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaa 199  Q
    | ||  |||||||||| ||           ||  |||||||||| ||||| || | ||||||||||||||||||||||||| || ||||| |||| ||||    
T  138151 gcaacctcaaaccaccgtcccaaaaaaaaacatccacctaacacaaaaagcaagaggacccaattctaataggcctaaaacaagacaacagaaaaagaaa 138052  T
Q  200 gtgaaaacctagggaatagtggagcagtacttaatactaatactggactataattttattttt 262  Q
    ||| |||||| ||||||||||||| |||||||| || || || | |||||||||||| |||||    
T  138051 gtggaaacctggggaatagtggagtagtacttagtagtactaatagactataatttttttttt 137989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 27237418 - 27237597
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||  || | | ||||||||||||||||| ||||||||||    
T  27237418 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatg 27237517  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| ||          |||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  27237518 aggaacctcaaaccaccctc-ccaaaaaaacactcacctaacaccataagcaagatgacccaattctaataggcctaaaac 27237597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 51 - 262
Target Start/End: Original strand, 17800266 - 17800477
Alignment:
Q  51 gtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaag 150  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||| |||||||||||||          ||  ||||||||||||||||    
T  17800266 gtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccaccatcccaagaaaa-catccacctaacaccaaaag 17800364  T
Q  151 taaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtgaaaacctagggaatagtggagcagtacttaatactaatactggacta 249  Q
     || | ||||||||||||||||||||||||| || ||||| |||||||||||| |||||| |||| ||||||   ||||||||||| || ||||   |||    
T  17800365 caagaggacccaattctaataggcctaaaacaagacaacagaaaaggaaagtggaaacctggggagtagtgggatagtacttaatagtactacttatcta 17800464  T
Q  250 taattttattttt 262  Q
    ||||||| |||||    
T  17800465 taatttttttttt 17800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2611257 - 2611358
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||  || ||| ||| |||||||||||| || |||||||||    
T  2611257 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatg 2611356  T
Q  101 ag 102  Q
    ||    
T  2611357 ag 2611358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 9021799 - 9021896
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||| | |||||||||| ||||||||||||||||||| | | ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 6765680 - 6765792
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |  || || |||||||||||||||||||||||||| | ||| |    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagta 6765779  T
Q  105 atatcaaaccacc 117  Q
    |  ||||||||||    
T  6765780 acctcaaaccacc 6765792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 36902924 - 36903020
Alignment:
Q  6 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||||||||| |||||| ||||||||||||   |||||||||||||||| |||| |||||||||||||| ||| |||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgag 36903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 7398556 - 7398379
Alignment:
Q  3 taaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| | | | |||||||||  | |||| ||||||||||||||||||| ||||||||||    
T  7398556 taaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgag 7398457  T
Q  103 aaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
     ||  |||||||||| ||          ||  ||| |||||||||||| || | |||||||||||||||||||||||||    
T  7398456 gaacctcaaaccaccctc-ccaaaaaaacatccacgtaacaccaaaagcaagaggacccaattctaataggcctaaaac 7398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29077327 - 29077226
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| | |||||||||| |||||||||||||||    
T  29077327 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatg 29077228  T
Q  101 ag 102  Q
    ||    
T  29077227 ag 29077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18776761 - 18776865
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| | |||||||| |||||||||||||||    
T  18776761 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatg 18776860  T
Q  101 agaaa 105  Q
    |||||    
T  18776861 agaaa 18776865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 48983842 - 48983940
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  48983842 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8171534 - 8171635
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| || ||||||| |||||||||||||||    
T  8171534 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatg 8171633  T
Q  101 ag 102  Q
    ||    
T  8171634 ag 8171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 23859180 - 23859001
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||| |   ||||||||||   | ||||||||| ||||||| |||||||||||||||    
T  23859180 tttaagagaataatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatg 23859081  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || |   |||||||||| ||          ||| |||||||||||||| | || | |||||||||||||||||||||||||    
T  23859080 aggatcctcaaaccaccctc-ccaaaaaaacacccacctaacaccaaatgcaagaggacccaattctaataggcctaaaac 23859001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 20091279 - 20091377
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  20091279 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36891685 - 36891571
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||| ||||||||||||| || ||||||| ||| ||||||| | || ||||||||   || || ||||||||||||||||||||||||||||||    
T  36891685 tttaaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatg 36891586  T
Q  101 agaaatatcaaacca 115  Q
    || ||  ||||||||    
T  36891585 aggaacctcaaacca 36891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 20153297 - 20153192
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaa 111  Q
    |||||| ||||||||| ||||||||||||||||||||| || |||||||||   |  |||||||| ||||||||||| |||||||||||||  || ||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaa 20153198  T
Q  112 accacc 117  Q
    ||||||    
T  20153197 accacc 20153192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38971359 - 38971267
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgta 94  Q
    ||||||||| |||| || ||||||||| ||||||||||||||||||| | |||||||||||||| | |||| ||| ||||||||||||||||||    
T  38971359 tttaaaagatcaatattttatttaaat-ttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgta 38971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 10329415 - 10329509
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaa 105  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  |   |||||||||||||||| ||||||||||||||||||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaa 10329509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 91  Q
    |||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||   | |||| ||| |||||||||||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 38414874 - 38414972
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| ||| |||||||||  || |||||||||||||||| || | | ||||||||||| || ||||||||||||||||| ||||| |||||||||||    
T  38414874 aaaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgag 38414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10955591 - 10955490
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || |||||||||||||||| || | | ||||||||||  || ||| || |||||||||| |||||||||||||||    
T  10955591 tttaaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatg 10955492  T
Q  101 ag 102  Q
    ||    
T  10955491 ag 10955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 12596294 - 12596383
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || |||| |||||||||||||| | | ||||||||||| || |||||| |||||||||| |||||||||| ||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgag 12596383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 24525688 - 24525781
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || |||||||||||||||| || | | ||| ||||||  || |||||||| |||||||| |||||||||||||||||    
T  24525688 aacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 24525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12419490 - 12419606
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |   | ||||| |||  | || |||||| ||||||||||||  | |||||||    
T  12419490 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatg 12419589  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||  ||||||||||    
T  12419590 aggaacctcaaaccacc 12419606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 96  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| | | || |||||||  || |||| |||| | |||||||||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26254100 - 26254017
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||| |||||||    
T  26254100 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 12981431 - 12981317
Alignment:
Q  3 taaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |   | |||||| |  || ||| ||||||||||||||||||| ||||| |||||    
T  12981431 taaaagaagaatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgag 12981332  T
Q  103 aaatatcaaaccacc 117  Q
     ||  ||||||||||    
T  12981331 gaacctcaaaccacc 12981317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8239794 - 8239693
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||  ||||||||||||| || |||||||| ||||||| || | | ||||||||||| || |||||||| |||||||| | ||||||||| |||    
T  8239794 tttaaaagagtaatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatg 8239695  T
Q  101 ag 102  Q
    ||    
T  8239694 ag 8239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 9014782 - 9014858
Alignment:
Q  19 tatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||| || |||||||||||||||| | |||||||||||       ||||||||||||||||||||||||||||||||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgag 9014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19692201 - 19692100
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | | ||||||||  || |||| |||||||||||| |||  ||||||||||    
T  19692201 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatg 19692102  T
Q  101 ag 102  Q
    ||    
T  19692101 ag 19692100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 23020479 - 23020656
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||| |||  ||||| || |||||||||||||||| || | || |||||||||     ||| |||||||||||||||||||||||||||||    
T  23020479 tttaaaagaacaacgtttcatttagattttttaaaagataaatataaggtgttgtatatatgcaca-cactcaaaggtgaaaatcactaccgtatacatg 23020577  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  ||||| || | ||          |||  |||||||||||||||||| ||||||||||||||||||| |||||||    
T  23020578 aggaacttcaaatcatcctctcaaaaaa--cacctacctaacaccaaaagtaatatgacccaattctaataggtctaaaac 23020656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 23551094 - 23551167
Alignment:
Q  29 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || | ||||||||||||  || || |||||||||||||| |||||||||||||||||    
T  23551094 ttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 23551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 18201244 - 18201069
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||||||   | | ||||||||| || |||| || ||||||||||  |||| || |||||    
T  18201244 tttaaacgaacaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatg 18201145  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaa 178  Q
    || ||  |||||||||| ||          |||||||||||||| ||||| || | |||||||||||||||| |||||    
T  18201144 aggaacctcaaaccaccctc--ctaaaaaacactcacctaacacaaaaagcaagacgacccaattctaatagacctaa 18201069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 47984964 - 47985066
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||| | |||||||||||||| || |||| |||||| ||||| || | | ||||||||||  || ||||||||||||||||| || |||||||||||    
T  47984964 tttaaaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacat 47985063  T
Q  100 gag 102  Q
    |||    
T  47985064 gag 47985066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat 61  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | || ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 26917806 - 26917881
Alignment:
Q  131 cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtgaaa 205  Q
    |||||||||||||||||||| || | ||||||||||||||| ||||||||| || ||||| || |||||| |||||    
T  26917806 cactcacctaacaccaaaagcaagaagacccaattctaataagcctaaaacaagacaacagaagaggaaaatgaaa 26917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 33162338 - 33162417
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||| ||||| |||||||| || ||||||||||||||||||| | | ||||||||||  || |||| ||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 28749813 - 28749716
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||| ||||||||| || ||| ||||||||||||||| | | ||||||||||  || ||| || | |||||||| |||||||||||||||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 20091385 - 20091430
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||    
T  20091385 cacctaacaccaaaagtaagaggacctaattctaataggcctaaaa 20091430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 25010473 - 25010439
Alignment:
Q  68 cacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||||||| |||||||||||||||||    
T  25010473 cacccaaaggtgaaaatgactaccgtatacatgag 25010439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 23551175 - 23551220
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  23551175 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 23551220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 25010431 - 25010386
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  25010431 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 25010386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 38414980 - 38415025
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  38414980 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 38415025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 48983948 - 48983993
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    ||||||||||||||||||| | |||  |||||||||||||||||||    
T  48983948 cacctaacaccaaaagtaagaggacttaattctaataggcctaaaa 48983993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45758612 - 45758493
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| | || ||||||||||| | || ||||||||||||||||||||||||||||||    
T  45758612 tttaaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatg 45758513  T
Q  101 agaaatatcaaaccaccatc 120  Q
    || ||  |||||||||||||    
T  45758512 aggaacctcaaaccaccatc 45758493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38853640 - 38853537
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||| | ||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  38853640 tttaaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatg 38853541  T
Q  101 agaa 104  Q
    ||||    
T  38853540 agaa 38853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 5533431 - 5533223
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    |||||||||||||| |||||||||||| |||| |||||||||| |||| | | |||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  5533431 tttaaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacat 5533332  T
Q  100 gagaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaa 198  Q
    ||| ||  |||||||||||||          | | ||||||||| |||||| || | || ||||||||||||||| |||||| || ||||  |||| |||    
T  5533331 gaggaaactcaaaccaccatcccaaaaaaaactcccacctaacatcaaaagcaagaggatccaattctaataggcgtaaaacaagacaacggaaaaagaa 5533232  T
Q  199 agtgaaaac 207  Q
    |||||||||    
T  5533231 agtgaaaac 5533223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 38547035 - 38547207
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | | ||||||||||| || |||||||| ||||||||||||| | |||||||||| |    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaa 178  Q
    |  |||||||||| ||          ||| |||||||||| |||||||| | |||| |||||||||||||||||    
T  38547135 acctcaaaccaccctc-ccaaaaaaacacccacctaacactaaaagtaagaggaccaaattctaataggcctaa 38547207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 39134717 - 39134897
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| | |  |||||||||   | ||||||||||||| ||||||||| ||||||||    
T  39134717 tttaaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacat 39134816  T
Q  100 gagaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    ||| ||  |||||||||| ||          ||| |||||||||||||||| || | |||||||||||||||||| ||||||    
T  39134817 gaggaacctcaaaccaccctc-ccaaaaaaacacccacctaacaccaaaagcaagaggacccaattctaataggcttaaaac 39134897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 43235767 - 43235884
Alignment:
Q  5 aaagaacaatgttctatttaaatctttta--aaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||||||| ||||   ||||||||||||||   |||||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  43235767 aaagaaaaatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgag 43235866  T
Q  103 aaatatcaaaccaccatc 120  Q
     ||  |||||||||||||    
T  43235867 gaacctcaaaccaccatc 43235884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5316798 - 5316697
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  5316798 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 5316699  T
Q  101 ag 102  Q
    ||    
T  5316698 ag 5316697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23185545 - 23185444
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  23185545 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatg 23185446  T
Q  101 ag 102  Q
    ||    
T  23185445 ag 23185444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44655859 - 44655758
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  44655859 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatg 44655760  T
Q  101 ag 102  Q
    ||    
T  44655759 ag 44655758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 26804059 - 26803888
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||| | ||||||||| |||||||||||||||||||   ||||||||||||   | |||   |||||||||||||||||||||||||||||||    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |  |||||||||| ||          |||||||||||||||||||| || || || ||||||||||||| |||||||    
T  26803962 acctcaaaccaccctc--ccaaaaaacactcacctaacaccaaaagcaagataactcaattctaataggactaaaac 26803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 27559745 - 27559654
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33170877 - 33170773
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||| ||||||||| ||||||||| ||||||||  ||||||||| | || |||||||||  || |||| || |||||||||||||||||||||||||    
T  33170877 tttaaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatg 33170778  T
Q  101 agaaa 105  Q
    |||||    
T  33170777 agaaa 33170773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5027667 - 5027566
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| |||| |||    
T  5027667 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatg 5027568  T
Q  101 ag 102  Q
    ||    
T  5027567 ag 5027566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 9173026 - 9173119
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  9173026 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9173119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 9181008 - 9181101
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  9181008 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9181101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14146418 - 14146317
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| || ||||||| |||||||||||||||    
T  14146418 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatg 14146319  T
Q  101 ag 102  Q
    ||    
T  14146318 ag 14146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41697132 - 41697233
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || |||||||||||||||||||||  |||||||||||  || || ||| | |||||||| |||||||||||||||    
T  41697132 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatg 41697231  T
Q  101 ag 102  Q
    ||    
T  41697232 ag 41697233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50881548 - 50881447
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || || | | |||||||||| ||||| |||||||||    
T  50881548 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatg 50881449  T
Q  101 ag 102  Q
    ||    
T  50881448 ag 50881447  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 17169064 - 17168973
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | || |||||||||  || ||||||||||||||||| |||||| ||||||||||    
T  17169064 caatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10925948 - 10926050
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    |||||||||||||| |||||||||| | |||| |||| |||||||||| | | ||||||||||   |||| |||||| ||||||||||||||||||||||    
T  10925948 tttaaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacat 10926047  T
Q  100 gag 102  Q
    |||    
T  10926048 gag 10926050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3406536 - 3406435
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| |  |||||||||| |||||||||||||||    
T  3406536 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatg 3406437  T
Q  101 ag 102  Q
    ||    
T  3406436 ag 3406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3440284 - 3440385
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| |  |||||||||| |||||||||||||||    
T  3440284 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatg 3440383  T
Q  101 ag 102  Q
    ||    
T  3440384 ag 3440385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 4971617 - 4971714
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||||| || ||||||||||||||||||| |   ||||||||||  || |||||| | |||||||| |||||||||||||||||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgag 4971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 6771897 - 6771812
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtataca 6771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 16140161 - 16140072
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || ||||||||||||||||||| | || |||||||||  || |||| | |||||||||| |||||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 16140072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 40501796 - 40501885
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||| |||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||| ||||| ||||||||||||||||    
T  40501796 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 1366878 - 1366970
Alignment:
Q  6 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    |||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||| ||||||| |||||||||||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtataca 1366970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6889729 - 6889646
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||  || || ||| ||||||||||    
T  6889729 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6891575 - 6891492
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||  || || ||| ||||||||||    
T  6891575 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6891492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21740932 - 21741029
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    ||||||||| |||||||||||||  || ||||||||||||||||||| | | ||||||||||   | |||||| |||||||||| |||||| ||||||    
T  21740932 tttaaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 50146414 - 50146313
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||  |||| |||||||||| ||| | | ||| |||||||  |  |||||||||| ||||||| |||| ||||||||    
T  50146414 tttaaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatg 50146315  T
Q  101 ag 102  Q
    ||    
T  50146314 ag 50146313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 6221791 - 6221680
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | | |||||||| |  || || | ||| |||||||||| || |||||| ||||| |    
T  6221791 aaagaacaatgttctatttaaat-ttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  105 atatcaaaccacc 117  Q
    |  ||||||||||    
T  6221692 acctcaaaccacc 6221680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 19955825 - 19955734
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 19955734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 51607434 - 51607536
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtc-gtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||| || |||||| |||||| || |||||||||||||||| || | | | |||||||||  || |||||||| |||||||| ||||||||||||||    
T  51607434 tttaaaaaaaaaatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacat 51607533  T
Q  100 gag 102  Q
    |||    
T  51607534 gag 51607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 35392387 - 35392295
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgta 94  Q
    |||||||||| |||||| ||||||||| ||||||  ||||||||||| | | ||||||||||  ||  | ||||||||||||||||||||||||    
T  35392387 tttaaaagaataatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17322618 - 17322664
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||    
T  17322618 tttaaaagaacaatgttctatttatatttttttaaagataaatacaa 17322664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 1366982 - 1367027
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  1366982 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 1367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 9173127 - 9173172
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||    
T  9173127 cacctaacaccaaaagtaagaggacctaattctaataggcctaaaa 9173172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 13913586 - 13913631
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  13913586 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 13913631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 22865459 - 22865502
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaa 22865502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27906724 - 27906770
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||||    
T  27906724 tttaaaagagcaatgttccatttatattttttaaaagataaatacaa 27906770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 9181109 - 9181154
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  9181109 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 9181154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 19955726 - 19955681
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  19955726 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 19955681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 27559646 - 27559601
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||    
T  27559646 cacctaacaccataagtaagaggacctaattctaataggcctaaaa 27559601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 44895661 - 44895616
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  44895661 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 44895616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 17168964 - 17168920
Alignment:
Q  136 acctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    ||||||||||||||| || | |||| |||||||||||||||||||    
T  17168964 acctaacaccaaaagcaagaagacctaattctaataggcctaaaa 17168920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16097114 - 16096996
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||| ||| ||||||||||||||||| |||||| ||||||||    
T  16097114 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatg 16097015  T
Q  101 agaaatatcaaaccaccat 119  Q
    || ||  ||||||||||||    
T  16097014 aggaacctcaaaccaccat 16096996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 38400904 - 38400725
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||   | ||  |||||||||||||||||||||||||||||    
T  38400904 tttataagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatg 38400805  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| ||          ||| |||||||||||||||| || ||||||| |||||||||||||||||||    
T  38400804 aggaacctcaaaccaccctc-ttaaaaaaacacccacctaacaccaaaagcaagatgaccctattctaataggcctaaaac 38400725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 11912757 - 11912933
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    ||||||||||||||||||||||| |   |||| |||||||||||| | ||||||||||   | || |||||| |||||||||||||||||||||| || |    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |  |||||||||| ||          |||||||||||||||||||  || |||||||||||||||||||||||||||    
T  11912857 acctcaaaccaccctcccaaaaaaaacactcacctaacaccaaaatcaagatgacccaattctaataggcctaaaac 11912933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6965113 - 6965012
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  6965113 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 6965014  T
Q  101 ag 102  Q
    ||    
T  6965013 ag 6965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12337444 - 12337545
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||| || |||||| |||||||||| |||||||||||||||    
T  12337444 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatg 12337543  T
Q  101 ag 102  Q
    ||    
T  12337544 ag 12337545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21665696 - 21665797
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||  | || | ||| ||||||||||||||||||||||||    
T  21665696 tttaaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatg 21665795  T
Q  101 ag 102  Q
    ||    
T  21665796 ag 21665797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28425706 - 28425807
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||  || |||||||| ||||||||||||||| |||| |||    
T  28425706 tttaaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatg 28425805  T
Q  101 ag 102  Q
    ||    
T  28425806 ag 28425807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29939858 - 29939959
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||| ||||||||||||| | ||||||||||||  || ||||||||||||||||| |||||||||||||||    
T  29939858 tttaaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 29939957  T
Q  101 ag 102  Q
    ||    
T  29939958 ag 29939959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24035541 - 24035657
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||| |||   | |||| |||||||||||||||||||| |||||||    
T  24035541 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatg 24035640  T
Q  101 agaaatatcaaaccacc 117  Q
    || |||  |||||||||    
T  24035641 aggaatcgcaaaccacc 24035657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8907075 - 8907179
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||| ||| ||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  8907075 tttaaaagagtaatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatg 8907174  T
Q  101 agaaa 105  Q
    |||||    
T  8907175 agaaa 8907179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9046136 - 9046034
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    |||||||||||||||||||||||| || |||| |||||||||||| || | | ||||||||||  || ||||||||||||||||| ||||||||||||||    
T  9046136 tttaaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 9046037  T
Q  100 gag 102  Q
    |||    
T  9046036 gag 9046034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3155323 - 3155222
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||    
T  3155323 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatg 3155224  T
Q  101 ag 102  Q
    ||    
T  3155223 ag 3155222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4506000 - 4505899
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  4506000 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatg 4505901  T
Q  101 ag 102  Q
    ||    
T  4505900 ag 4505899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 10762565 - 10762662
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||||| || |||||||||||||||| || | |  |||||||||| || ||||||||||||||||| |||||||||||||||||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 10762662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 16227368 - 16227543
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||  | |||| | || |||||||||||||  ||||||| || |    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  105 atatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |  |||||||||| ||          ||| ||||||||||||||||||| ||||| |||||||||||| | ||||||    
T  16227468 acctcaaaccaccctc-ccaaaaaaccacccacctaacaccaaaagtaagatgactcaattctaatagacataaaac 16227543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 24410535 - 24410442
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  24410535 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 24410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 12134039 - 12134152
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 103  Q
    |||||||||||||||||||||||   |||||||||||||||||| |   ||||||||||   | |||||||| ||||||||||||||||||||||| ||     
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  104 aatatcaaaccacc 117  Q
    ||  ||||||||||    
T  12134139 aacctcaaaccacc 12134152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 42029247 - 42029166
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatca 86  Q
    ||||||||||||||||||||||| |||||||||||||||| || | ||| |||| ||||||| |||| ||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26716235 - 26716133
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| || | | | ||||||||  || ||||||||||||||||| ||||||||||||||    
T  26716235 tttaaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 26716136  T
Q  100 gag 102  Q
    |||    
T  26716135 gag 26716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34694081 - 34693991
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 91  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| ||||||    
T  34694081 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34716493 - 34716403
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 91  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| ||||||    
T  34716493 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 13800543 - 13800718
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcaccc-aaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||||||||||| |||||||||||||||| || | | ||||||||||   | ||||| ||||||||||||||||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  103 aaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaa 179  Q
     ||  ||||| |||| ||          ||| |||||||||||||||| || | || ||||||||||||||||||||    
T  13800643 gaacctcaaatcaccttc-ccaaaaaaacacacacctaacaccaaaagcaagaagatccaattctaataggcctaaa 13800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 37182739 - 37182597
Alignment:
Q  38 ataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatcnnnnnnnnnncactcac 137  Q
    |||||||||| | ||||||||||||   | |||||||| |||||||||||||||||||||||||| ||  ||||| |||| ||          ||| |||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccctc-ccaaaaaaacacccac 37182641  T
Q  138 ctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||| |||||| || |||||||||||||||||||||||||||    
T  37182640 ctaacagcaaaagcaagatgacccaattctaataggcctaaaac 37182597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40636244 - 40636164
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaa 81  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| |||||||    
T  40636244 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 27506746 - 27506837
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || ||||||||||| ||||| ||||| |||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7162890 - 7162789
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  || || |||||||||| ||||||||||| |||    
T  7162890 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatg 7162791  T
Q  101 ag 102  Q
    ||    
T  7162790 ag 7162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7742129 - 7742245
Alignment:
Q  1 tttaaaagaacaatgttctattta-aatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||| | ||| ||||||||   | || |||||||||||||  |||| ||||| |||    
T  7742129 tttaaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcat 7742228  T
Q  100 gagaaatatcaaaccac 116  Q
    ||| ||  |||||||||    
T  7742229 gaggaacctcaaaccac 7742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat 61  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22727453 - 22727497
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatac 45  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  22727453 tttaaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 3953100 - 3953011
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || ||||||||||||||||||| | | |||||| |||  || |||||| |||||||||| | |||||||| ||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgag 3953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 22727530 - 22727617
Alignment:
Q  33 aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatc 120  Q
    ||||||||||||| | | | ||||||||||  || |||||||| ||||||||||||||| ||||||||| ||   |||||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaaccaccatc 22727617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 10252375 - 10252334
Alignment:
Q  140 aacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  10252375 aacaccaaaagcaagatgacccaattctaataggcctaaaac 10252334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 10252518 - 10252431
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaag---cgtcgtatatatgttgtgcacccaaaggtgaaaatcacta 89  Q
    |||||| ||||||| |||||||| ||||||||||||||||||| |   ||||||||||||  |   |||||||||||||||| |||||    
T  10252518 aaagaaaaatgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccacta 10252431  T

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Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 27506845 - 27506890
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  27506845 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 27506890  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 29694357 - 29694311
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||| || | ||||||||||||||||| |||||||    
T  29694357 cacctaacaccaaaagcaagaggacccaattctaataggtctaaaac 29694311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5952713 - 5952791
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaa 81  Q
    ||||||||| ||||||| ||||||  | ||||||||||||||||||| | | ||||||||||  || |||||| |||||||    
T  5952713 tttaaaagagcaatgttatattta--ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 8327663 - 8327618
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  8327663 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 8327618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44914899 - 44914932
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaa 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  44914899 tttaaaagaacaatgttctatttaaattttttaa 44914932  T

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Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52468398 - 52468282
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||| | || ||||||||||||||||||||||||| ||||    
T  52468398 tttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatg 52468299  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||  ||||||||||    
T  52468298 aggaacctcaaaccacc 52468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 36118453 - 36118630
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||||  | ||||||||  |||||||||||||||||||||||    
T  36118453 tttaaatgaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatg 36118552  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    || ||  || |||||||  |          ||  |||||||||||||||| || ||||||||||||||||||||||||||    
T  36118553 agtaacctctaaccacc--cttcaaaaaaacatccacctaacaccaaaagcaagatgacccaattctaataggcctaaaa 36118630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 39329387 - 39329566
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| | || ||||||||||  | ||||||||| ||||||||  ||||||||||| |    
T  39329387 tttaaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacagg 39329486  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || || ||||||||||| ||          ||| ||| |||||||||||| || | |||| ||||||||||||||||||||    
T  39329487 aggaacatcaaaccaccctc-ccaaaaaaacacccacataacaccaaaagcaagaagaccaaattctaataggcctaaaac 39329566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 54780889 - 54780788
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  54780889 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 54780790  T
Q  101 ag 102  Q
    ||    
T  54780789 ag 54780788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32128696 - 32128592
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| ||||||||||||||     
T  32128696 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacata 32128597  T
Q  101 agaaa 105  Q
    |||||    
T  32128596 agaaa 32128592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2790736 - 2790837
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  2790736 tttaaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 2790835  T
Q  101 ag 102  Q
    ||    
T  2790836 ag 2790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10979012 - 10978911
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| | |||||||| |||||||||||||||    
T  10979012 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatg 10978913  T
Q  101 ag 102  Q
    ||    
T  10978912 ag 10978911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43455526 - 43455627
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  43455526 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 43455625  T
Q  101 ag 102  Q
    ||    
T  43455626 ag 43455627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47129099 - 47128998
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  47129099 tttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatg 47129000  T
Q  101 ag 102  Q
    ||    
T  47128999 ag 47128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 36178778 - 36178606
Alignment:
Q  7 agaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaat 106  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||||||||||   | |||||||| ||||||||||||||| |||||||||  |||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaat 36178679  T
Q  107 atcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
      ||||||||| ||          |||||||||||||||||||| || | ||||| |||||||| ||||||||||    
T  36178678 -ccaaaccaccctc-ccaaaaaaacactcacctaacaccaaaagcaagaggacccgattctaatgggcctaaaac 36178606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16845134 - 16845032
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| || | ||||||||||||| || ||||||| ||||||||| ||||||||||||||    
T  16845134 tttaaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacat 16845035  T
Q  100 gag 102  Q
    |||    
T  16845034 gag 16845032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 38209590 - 38209687
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 38209687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27112142 - 27112026
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||| | | | ||||||||   | |||| ||| ||||||||||||||||||||||||    
T  27112142 tttaaacgaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatg 27112043  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||  ||||||||||    
T  27112042 aggaacctcaaaccacc 27112026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 48209352 - 48209248
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| | ||||| || |||||||||||||||    
T  48209352 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatg 48209253  T
Q  101 agaaa 105  Q
    |||||    
T  48209252 agaaa 48209248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 34027681 - 34027590
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| ||||| |||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgag 34027590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5128852 - 5128938
Alignment:
Q  16 ttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||| || ||||||||||||||||||| | | ||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgag 5128938  T

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Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36362866 - 36362964
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||   | |||||||| ||| ||||||||||| |||||||    
T  36362866 tttaaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 37777229 - 37777319
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 37777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 39655252 - 39655334
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatca 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   || |||||||  || |||||||||||||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 40217327 - 40217163
Alignment:
Q  18 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 117  Q
    |||||||||| |||||||||||||||| || | ||||||||||||   | || |||||| ||||||||| || | |||||||||| ||  ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacc 40217228  T
Q  118 at-cnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
     | |           ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40217227 cttccaaaaaaatatactcacctaacaccaaaagcaaaatgacccaattctaataggcctaaaac 40217163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10041995 - 10042092
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 98  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| | | ||||| |||||  | |||| ||| ||||||||||||||||||||||    
T  10041995 tttaaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtataca 10042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24397046 - 24396945
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||| || ||||||||| |||||||||||||||| || | |  ||||||||||  | ||| |||||||||||||||||| ||||||||||    
T  24397046 tttaaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatg 24396947  T
Q  101 ag 102  Q
    ||    
T  24396946 ag 24396945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32915497 - 32915396
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| | |||||||||||||    
T  32915497 tttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatg 32915398  T
Q  101 ag 102  Q
    ||    
T  32915397 ag 32915396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34768569 - 34768670
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||||| |||||||||| | |||||||||||||    
T  34768569 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatg 34768668  T
Q  101 ag 102  Q
    ||    
T  34768669 ag 34768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 35779325 - 35779421
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||| | || ||||||||||||||||||| | ||||||||||||  || ||||||||||||||||| | |||||||||||||||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 35779421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 15735202 - 15735029
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||| |||||| |||||||||||||| |||||||||||||||||||  |||||||||||     | |||| |||  ||||||||| |||||||||||||    
T  15735202 tttaagagaacagtgttctatttaaattttttaaaagataaatacaagacgtcgtatata-----tacaccaaaaaatgaaaatcattaccgtatacatg 15735108  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| ||          ||  |||||||||||||||| || | ||||||||||||| |||||||||||    
T  15735107 aggaacttcaaaccaccctc--caaaaaaacatccacctaacaccaaaagcaagaagacccaattctaacaggcctaaaac 15735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 30507200 - 30507296
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtgaaaacctagggaatagtggagcagtact 230  Q
    |||||||||||||||| || | ||| ||||||| ||||||||||||| || |||||||||||||||||| |||||| |||| ||||| || ||||||    
T  30507200 cacctaacaccaaaagcaagaggactcaattcttataggcctaaaacaagacaacataaaaggaaagtggaaacctggggagtagtgaagtagtact 30507296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || |||||||||| ||||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 51691910 - 51692009
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacc--caaaggtgaaaatcactaccgtataca 98  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||| | | ||||||||||  || ||||   ||| ||||||||||||||| ||||||    
T  51691910 tttaaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatataca 51692009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16922324 - 16922407
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || |||||||||||||||| |||| ||||||||||||  ||   |||||||||||||||    
T  16922324 tttaaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaat 16922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 4167914 - 4168066
Alignment:
Q  29 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatcnnnnnnnn 128  Q
    ||||||||||||||||||| | | ||||||||||   | |||||||||||||||||||||||| |||||||||| ||  ||||| |||| ||            
T  4167914 ttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcaccttcctagaaaa 4168013  T
Q  129 nncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
      |||||||||||||||||||  || |||||   ||| |||||||||||||||    
T  4168014 aacactcacctaacaccaaaaccaagatgactatattttaataggcctaaaac 4168066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 37744916 - 37745022
Alignment:
Q  13 atgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaa 111  Q
    ||||||||||||||| |||| |||||||||||| || | |||| |||||||   | || ||||||||||||||||||||||||||| |||| ||  ||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  112 accacca 118  Q
    |||||||    
T  37745016 accacca 37745022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 54083240 - 54083338
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||| | ||||| |||||||||||||||||    
T  54083240 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 1105632 - 1105543
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||| | |||||||||| |||||| ||||||||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 2135324 - 2135417
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||| ||||||||||||||||||| | ||||||||||||   | || |||||||| || ||||||| |||||| |||||    
T  2135324 aacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgag 2135417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 13460306 - 13460221
Alignment:
Q  14 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 99  Q
    ||||||||||| || ||||||||||||||||||| | ||||||||||||  ||  ||||| | |||||||| ||||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacat 13460221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30507117 - 30507162
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaataca 46  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  30507117 tttaaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35465218 - 35465118
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||| |||||| || ||||| |||||||||| ||||   ||||||||||  || |||| ||| |||||||| |||||||||||||||    
T  35465218 tttaaaagaacaatgttatatttatattttttacaagataaata-aaaggtgcgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatg 35465120  T
Q  101 ag 102  Q
    ||    
T  35465119 ag 35465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19498614 - 19498515
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||  ||||||  || || |||||||||||||| ||||| |||||||||    
T  19498614 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatg 19498517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 264
Target Start/End: Complemental strand, 22077164 - 22077034
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaactag-caacataaaaggaaagtgaaaacctagggaatagtggagcagtacttaa 233  Q
    |||||||||||||||| |  | ||| ||||||||||||| ||||||| || ||||| ||||| |||||| |||||| |||| |||||| | |||| |||     
T  22077164 cacctaacaccaaaagcatgaggactcaattctaataggtctaaaaccagacaacagaaaagaaaagtggaaaccttgggagtagtggggtagtatttag 22077065  T
Q  234 tactaatactggactataattttatttttta 264  Q
    ||  | |||||| |||||||||| |||||||    
T  22077064 tagcactactgggctataattttttttttta 22077034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 24614061 - 24614019
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaa 24614019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 37746849 - 37746895
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||| || |||||||||||||||||||||||||||    
T  37746849 cacctaacaccaaaagcaagatgacccaattctaataggcctaaaac 37746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 40089600 - 40089527
Alignment:
Q  29 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  40089600 ttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 40089527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17679512 - 17679432
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaa 81  Q
    ||||||||| |||| ||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||    
T  17679512 tttaaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 10428202 - 10428273
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaa 82  Q
    |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| ||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9578659 - 9578705
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||    
T  9578659 tttaaaagagcaatgttctatttatattttttaaaagataaatacaa 9578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 16845024 - 16844979
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  16845024 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 16844979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 29425297 - 29425342
Alignment:
Q  131 cactcacctaacaccaaaagtaaaatgacccaattctaataggcct 176  Q
    |||||||||||||| |||||||| || |||||||||||||||||||    
T  29425297 cactcacctaacacaaaaagtaagataacccaattctaataggcct 29425342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 35465110 - 35465065
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  35465110 cacctaacaccaaaagcaacatgacctaattctaataggcctaaaa 35465065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 38352359 - 38352404
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  38352359 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 38352404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 45656279 - 45656187
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    ||||||||| ||||||||| ||||||||||||||| ||| | ||| ||||||||   |  | ||||| ||||||||||| | |||||||||||    
T  45656279 aacaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatga 45656187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 16882393 - 16882484
Alignment:
Q  4 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 95  Q
    |||| |||||||||||||||| |  |||||||||||||||| || | | ||| |||||   || |||| |||||||||||| ||||||||||    
T  16882393 aaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 16882497 - 16882544
Alignment:
Q  133 ctcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||||| || | |||| |||||||||||||||||||    
T  16882497 ctcacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 16882544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 37777325 - 37777372
Alignment:
Q  133 ctcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||| ||||||||||||| || |||||| |||||||||||||||||||    
T  37777325 ctcaactaacaccaaaagcaagatgacctaattctaataggcctaaaa 37777372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 2135442 - 2135492
Alignment:
Q  131 cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||| ||||||||||||||| || | ||||||||||||||| |||||||||    
T  2135442 cactgacctaacaccaaaagcaagaggacccaattctaataagcctaaaac 2135492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 24969482 - 24969448
Alignment:
Q  68 cacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||||||||||||||| |||||||||||||||||    
T  24969482 cacccaaaggtgaaaatgactaccgtatacatgag 24969448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55255369 - 55255323
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 47  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||||    
T  55255369 tttaaaagagcaatgttccatttatattttttaaaagataaatacaa 55255323  T

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Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 19498507 - 19498462
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  19498507 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 19498462  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  11 caatgttctattta-aatcttttaaaagataaatacaaagcgtcgtatat 59  Q
    |||||||||||||| ||| ||||||||||||||||||| | |||||||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 32128587 - 32128542
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  32128587 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 32128542  T

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Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 34027582 - 34027537
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  34027582 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 34027537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 40089519 - 40089474
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  40089519 cacctaacaccaaaagcaagaggacctaattctaataggcctaaaa 40089474  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 51964823 - 51964737
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt---aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || ||||   ||||||||||||||| | | ||||||||||   | |||||| ||||||||||    
T  51964823 tttaaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 54083347 - 54083391
Alignment:
Q  136 acctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    ||||||||||||||| || | |||| |||||||||||||||||||    
T  54083347 acctaacaccaaaagcaagaggacctaattctaataggcctaaaa 54083391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 255 - 354
Alignment:
Q  2 ttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||  || |||||||| |||||||||||||||||||||||||    
T  255 ttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

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Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 20611889 - 20611721
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaa 111  Q
    ||||||||| |||||| ||||||| ||||||||||| | |||||||||||      || |||||||||||||||||||||||||||||||| ||  ||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  112 accaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||| ||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20611789 actaccctcccaaaaaaa-cactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 20611721  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 21183673 - 21183787
Alignment:
Q  3 taaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| || ||| |||||||||||| |||||||||||||||||||||   ||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  21183673 taaaataaaaatattctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgag 21183772  T
Q  103 aaatatcaaaccacc 117  Q
     ||  ||||||||||    
T  21183773 gaacctcaaaccacc 21183787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13727395 - 13727496
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  13727395 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 13727494  T
Q  101 ag 102  Q
    ||    
T  13727495 ag 13727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20711716 - 20711817
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  20711716 tttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 20711815  T
Q  101 ag 102  Q
    ||    
T  20711816 ag 20711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21479604 - 21479503
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||    
T  21479604 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatg 21479505  T
Q  101 ag 102  Q
    ||    
T  21479504 ag 21479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21280655 - 21280554
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||| ||||| |||||||||||||||    
T  21280655 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatg 21280556  T
Q  101 ag 102  Q
    ||    
T  21280555 ag 21280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27788684 - 27788785
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||| ||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||    
T  27788684 tttaaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 27788783  T
Q  101 ag 102  Q
    ||    
T  27788784 ag 27788785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33774227 - 33774126
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||||| |||||||| |||||||||||||||    
T  33774227 tttaaaagagtaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatg 33774128  T
Q  101 ag 102  Q
    ||    
T  33774127 ag 33774126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2477580 - 2477696
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||| | | | ||||||||   | |||| ||| ||||||||||||||||||||||||    
T  2477580 tttaaacgaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatg 2477679  T
Q  101 agaaatatcaaaccacc 117  Q
    || ||  ||||||||||    
T  2477680 aggaacctcaaaccacc 2477696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 1155849 - 1155946
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||  || || ||| |||||||||| |||||||||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 6159541 - 6159432
Alignment:
Q  8 gaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaata 107  Q
    ||||||||||||||||| || ||||||||||||||||||| | ||||||||||||  || ||  |||||||| |||||||||||||||| || || ||      
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T
Q  108 tcaaaccacc 117  Q
    ||||||||||    
T  6159441 tcaaaccacc 6159432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19737688 - 19737789
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||    
T  19737688 tttaaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatg 19737787  T
Q  101 ag 102  Q
    ||    
T  19737788 ag 19737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 24711007 - 24711096
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||| || ||| || |||||||||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgag 24711096  T

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Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 28075883 - 28075792
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||   | ||||||||||||||||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 28075792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 17354054 - 17353964
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 101  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||||||| |||||||| |||| |||||||||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34397967 - 34397866
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||||| ||||| |||| |||| |||||    
T  34397967 tttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatg 34397868  T
Q  101 ag 102  Q
    ||    
T  34397867 ag 34397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactac 90  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| | ||| ||||||||   | || ||||||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 4037030 - 4036895
Alignment:
Q  29 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccaccatcnnnnnnnn 128  Q
    |||||| |||||||||||| | | ||||||||| | || ||||||||||| || |||||||||||||| ||||| ||  |||||||||| ||            
T  4037030 ttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccctc-caaaaaa 4036932  T
Q  129 nncactcacctaacaccaaaagtaaaatgacccaatt 165  Q
      |||||||||||||||||||| || |||||||||||    
T  4036931 aacactcacctaacaccaaaagcaagatgacccaatt 4036895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 30832532 - 30832621
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||||||||| || |||||||| ||||||||||   | ||||||||||| || |||||| || ||||||| |||||||||| ||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgag 30832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 235230 - 235326
Alignment:
Q  11 caatgttctatttaaatcttttaaaagataaatacaaagcgtcg--tatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaa 105  Q
    ||||| |||||||| || |||||||||||||||| || | | ||  |||||||   || ||||||||| ||||||| ||||||||||||||||||||    
T  235230 caatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaa 235326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 19987162 - 19987117
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||||||||||||||||||    
T  19987162 cacctaacaccaaaagcaagatgacctaattctaataggcctaaaa 19987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27314174 - 27314258
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 84  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||| | | ||||||||||  || ||| || ||||||||||    
T  27314174 tttaaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 27994808 - 27994772
Alignment:
Q  72 caaaggtgaaaatcactaccgtatacatgagaaatat 108  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27994808 caaaggtgaaaatcactaccgtatacatgaggaatat 27994772  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 27788793 - 27788838
Alignment:
Q  135 cacctaacaccaaaagtaaaatgacccaattctaataggcctaaaa 180  Q
    |||||||||||||||| || |||||| |||| ||||||||||||||    
T  27788793 cacctaacaccaaaagcaagatgacctaattttaataggcctaaaa 27788838  T

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Target: scaffold0039 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 106645 - 106544
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||    
T  106645 tttaaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatg 106546  T
Q  101 ag 102  Q
    ||    
T  106545 ag 106544  T

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Target: scaffold0012 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 206489 - 206586
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 102  Q
    |||||| |||||||||||||||| || |||||||||||||||| | ||||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  206489 aaagaagaatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgag 206586  T

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Target: scaffold0182 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 23993 - 24105
Alignment:
Q  5 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 104  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||  || |||||||| |||||||||| |||||||| ||| || |    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  105 atatcaaaccacc 117  Q
    || ||||||||||    
T  24093 atctcaaaccacc 24105  T

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Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 230855 - 231034
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||  || | || |||||||||   |  ||||||||||||||||||||||| ||||||||    
T  230855 tttaaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatg 230954  T
Q  101 agaaatatcaaaccaccatcnnnnnnnnnncactcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    || ||  |||||||||| ||          ||| |||||||||||||||| || | ||||| |||||||||||||||||||    
T  230955 aggaacttcaaaccaccctc-ccaaaaaaccacccacctaacaccaaaagcaagaggacccgattctaataggcctaaaac 231034  T

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Target: scaffold0097 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 39024 - 38916
Alignment:
Q  9 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatat 108  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||   | ||| |||| |||||||||||||||||||| ||||| ||  |    
T  39024 aacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacct 38925  T
Q  109 caaaccacc 117  Q
    |||||||||    
T  38924 caaaccacc 38916  T

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Target: scaffold1320 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1461 - 1346
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    |||||||||| |||||||||||||||  |||||||||||||||| || | |  ||||||||| | | |||||||| ||||||||||||| ||||||||||    
T  1461 tttaaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatg 1362  T
Q  101 agaaatatcaaaccac 116  Q
    || ||  |||||||||    
T  1361 aggaacctcaaaccac 1346  T

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Target: scaffold1320; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 1331 - 1284
Alignment:
Q  134 tcacctaacaccaaaagtaaaatgacccaattctaataggcctaaaac 181  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||    
T  1331 tcacctaacaccaaaagtaagaggacccaattctaacaggcctaaaac 1284  T

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Target: scaffold0018 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 173515 - 173620
Alignment:
Q  10 acaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaaatatc 109  Q
    |||||||||||||||||| ||||||||||||||||||| |   ||||||||||   | ||||||||||| |||||||||||||||||| |||| ||  ||    
T  173515 acaatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T
Q  110 aaacca 115  Q
    ||||||    
T  173615 aaacca 173620  T

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Target: scaffold0070 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 1450 - 1349
Alignment:
Q  1 tttaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatg 100  Q
    ||||||||| || ||||||||||| || |||||||||||||||||||   | ||||||||||  || |||||| || ||||||| |||||||||||||||    
T  1450 tttaaaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatg 1351  T
Q  101 ag 102  Q
    ||    
T  1350 ag 1349  T

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Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 351360 - 351419
Alignment:
Q  31 ttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactac 90  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctac 351419  T

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Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 16064 - 16018
Alignment:
Q  71 ccaaaggtgaaaatcactaccgtatacatgagaaatatcaaaccacc 117  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  16064 ccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccacc 16018  T

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Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 16161 - 16126
Alignment:
Q  12 aatgttctatttaaatcttttaaaagataaatacaa 47  Q
    |||||||||||||||| |||||||||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaa 16126  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 183155 - 183105
Alignment:
Q  13 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgt 63  Q
    |||||||||||| || |||||||||||||||||||||  ||||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgt 183105  T

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