View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2961_low_22 (Length: 247)

Name: NF2961_low_22
Description: NF2961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2961_low_22
NF2961_low_22
[»] chr2 (42 HSPs)
chr2 (27-132)||(14530278-14530384)
chr2 (27-132)||(12023988-12024093)
chr2 (27-132)||(8455385-8455491)
chr2 (27-132)||(10543658-10543764)
chr2 (27-102)||(11514396-11514471)
chr2 (27-132)||(24200694-24200800)
chr2 (38-132)||(17667973-17668068)
chr2 (27-102)||(21779359-21779434)
chr2 (27-102)||(23397726-23397801)
chr2 (27-102)||(25079818-25079893)
chr2 (161-216)||(42808528-42808583)
chr2 (27-102)||(9671140-9671216)
chr2 (38-132)||(17623535-17623630)
chr2 (27-102)||(17896219-17896294)
chr2 (45-102)||(5450263-5450320)
chr2 (27-100)||(22371017-22371090)
chr2 (27-103)||(19977813-19977889)
chr2 (27-95)||(25249844-25249912)
chr2 (27-94)||(17705455-17705522)
chr2 (27-74)||(27573581-27573628)
chr2 (42-132)||(40416940-40417031)
chr2 (27-132)||(7214494-7214600)
chr2 (33-102)||(39914406-39914475)
chr2 (30-102)||(44521473-44521544)
chr2 (27-102)||(14544023-14544098)
chr2 (39-102)||(44604826-44604889)
chr2 (31-101)||(24860087-24860157)
chr2 (56-132)||(19614981-19615058)
chr2 (164-216)||(26826982-26827039)
chr2 (28-132)||(32781357-32781461)
chr2 (43-131)||(33795261-33795350)
chr2 (161-214)||(44089183-44089236)
chr2 (30-102)||(99363-99434)
chr2 (27-95)||(5840988-5841056)
chr2 (58-132)||(10546153-10546229)
chr2 (30-102)||(17380336-17380407)
chr2 (27-67)||(39189556-39189596)
chr2 (30-82)||(44643486-44643537)
chr2 (27-70)||(27466262-27466305)
chr2 (43-102)||(29419989-29420048)
chr2 (31-62)||(39499354-39499385)
chr2 (44-102)||(34752762-34752820)
[»] chr5 (28 HSPs)
chr5 (27-132)||(38879541-38879647)
chr5 (27-102)||(1565391-1565466)
chr5 (27-132)||(4619175-4619281)
chr5 (27-132)||(41014279-41014384)
chr5 (27-100)||(43334162-43334235)
chr5 (27-102)||(35710273-35710348)
chr5 (27-102)||(37024654-37024729)
chr5 (27-132)||(24448850-24448956)
chr5 (27-132)||(8170053-8170157)
chr5 (27-102)||(23974741-23974815)
chr5 (27-132)||(27328712-27328818)
chr5 (27-96)||(22600414-22600483)
chr5 (30-102)||(39301087-39301158)
chr5 (27-102)||(22187245-22187320)
chr5 (27-82)||(22861786-22861841)
chr5 (43-102)||(28516534-28516593)
chr5 (30-82)||(39079886-39079937)
chr5 (32-102)||(12006430-12006500)
chr5 (27-102)||(31299592-31299667)
chr5 (27-76)||(2838738-2838788)
chr5 (30-100)||(10634248-10634317)
chr5 (27-77)||(19438709-19438759)
chr5 (56-102)||(32703413-32703459)
chr5 (50-110)||(1405170-1405231)
chr5 (27-123)||(30006285-30006382)
chr5 (164-197)||(34375172-34375205)
chr5 (164-197)||(35540634-35540667)
chr5 (30-102)||(209027-209098)
[»] chr8 (39 HSPs)
chr8 (27-132)||(7136598-7136704)
chr8 (25-102)||(20869596-20869673)
chr8 (27-102)||(12670348-12670423)
chr8 (27-102)||(30454195-30454270)
chr8 (27-132)||(28817695-28817801)
chr8 (27-132)||(36720756-36720862)
chr8 (27-132)||(39461065-39461171)
chr8 (27-132)||(29521754-29521860)
chr8 (27-132)||(44530109-44530215)
chr8 (27-110)||(20284164-20284248)
chr8 (27-110)||(21070793-21070877)
chr8 (30-102)||(28407379-28407451)
chr8 (27-102)||(2626479-2626554)
chr8 (31-102)||(17823540-17823611)
chr8 (27-94)||(24245411-24245478)
chr8 (31-132)||(6760786-6760888)
chr8 (27-132)||(13160662-13160767)
chr8 (43-132)||(22598133-22598223)
chr8 (27-132)||(35261639-35261745)
chr8 (31-102)||(18164859-18164930)
chr8 (27-132)||(8897833-8897939)
chr8 (19-95)||(25250474-25250550)
chr8 (46-102)||(35105902-35105958)
chr8 (30-102)||(44781606-44781677)
chr8 (27-132)||(45071225-45071330)
chr8 (49-102)||(31457155-31457208)
chr8 (161-216)||(37698567-37698620)
chr8 (27-120)||(11748259-11748353)
chr8 (30-95)||(42083806-42083870)
chr8 (163-216)||(18405319-18405374)
chr8 (161-216)||(27127153-27127213)
chr8 (31-95)||(31454152-31454216)
chr8 (27-102)||(26954092-26954167)
chr8 (36-102)||(12625858-12625924)
chr8 (164-221)||(30232764-30232820)
chr8 (164-216)||(44598941-44598998)
chr8 (161-197)||(10730432-10730468)
chr8 (43-99)||(11001053-11001109)
chr8 (30-102)||(30962873-30962944)
[»] chr7 (42 HSPs)
chr7 (27-132)||(46354154-46354260)
chr7 (28-132)||(11617657-11617762)
chr7 (18-110)||(42495926-42496019)
chr7 (27-129)||(2541091-2541195)
chr7 (27-95)||(47077960-47078028)
chr7 (27-102)||(48735220-48735296)
chr7 (27-102)||(21172107-21172182)
chr7 (27-102)||(32758221-32758296)
chr7 (28-102)||(10693171-10693245)
chr7 (17-95)||(35334921-35334999)
chr7 (27-132)||(42805484-42805590)
chr7 (27-132)||(43557432-43557538)
chr7 (27-102)||(7193045-7193120)
chr7 (32-102)||(19426989-19427059)
chr7 (27-132)||(42798629-42798735)
chr7 (27-132)||(47716419-47716525)
chr7 (27-100)||(14732924-14732997)
chr7 (29-102)||(27629596-27629669)
chr7 (30-102)||(48123584-48123655)
chr7 (27-102)||(5180257-5180332)
chr7 (27-102)||(7794606-7794681)
chr7 (27-102)||(18326994-18327069)
chr7 (41-102)||(33872009-33872070)
chr7 (27-95)||(1424017-1424085)
chr7 (30-102)||(12473267-12473339)
chr7 (26-82)||(40463836-40463892)
chr7 (30-132)||(28362214-28362316)
chr7 (43-132)||(16341254-16341344)
chr7 (27-93)||(22699079-22699145)
chr7 (30-93)||(13805066-13805128)
chr7 (27-100)||(34626309-34626382)
chr7 (27-95)||(28078238-28078306)
chr7 (31-75)||(29140487-29140531)
chr7 (27-95)||(42476833-42476901)
chr7 (44-110)||(6736867-6736934)
chr7 (32-82)||(19265781-19265830)
chr7 (43-102)||(29907393-29907454)
chr7 (49-95)||(42391205-42391251)
chr7 (30-75)||(3469306-3469350)
chr7 (42-102)||(7644931-7644991)
chr7 (62-102)||(31591207-31591247)
chr7 (161-193)||(45261872-45261904)
[»] chr3 (40 HSPs)
chr3 (27-132)||(8247758-8247864)
chr3 (27-132)||(29366791-29366897)
chr3 (27-132)||(40272881-40272987)
chr3 (27-132)||(46421106-46421212)
chr3 (27-102)||(10870051-10870126)
chr3 (27-132)||(13730673-13730779)
chr3 (27-102)||(52926310-52926385)
chr3 (27-102)||(5173820-5173896)
chr3 (27-95)||(7696992-7697060)
chr3 (27-102)||(1217072-1217147)
chr3 (27-132)||(13628861-13628968)
chr3 (27-132)||(16735423-16735528)
chr3 (30-102)||(35417902-35417973)
chr3 (27-102)||(9607185-9607260)
chr3 (30-132)||(26573113-26573215)
chr3 (34-101)||(26869696-26869763)
chr3 (27-132)||(4495733-4495839)
chr3 (27-132)||(12914104-12914210)
chr3 (27-95)||(22123022-22123090)
chr3 (30-129)||(34420716-34420815)
chr3 (161-216)||(9144810-9144865)
chr3 (27-102)||(39203498-39203573)
chr3 (27-132)||(22609749-22609853)
chr3 (25-75)||(25517300-25517350)
chr3 (30-102)||(45620929-45621000)
chr3 (161-216)||(50462708-50462768)
chr3 (27-123)||(12525392-12525486)
chr3 (27-132)||(6411891-6411996)
chr3 (56-132)||(516420-516497)
chr3 (164-216)||(29322821-29322878)
chr3 (30-102)||(45948938-45949012)
chr3 (43-100)||(53062036-53062093)
chr3 (56-132)||(54032628-54032705)
chr3 (47-102)||(30928247-30928302)
chr3 (30-132)||(53996635-53996737)
chr3 (27-102)||(21875002-21875070)
chr3 (30-94)||(25944455-25944518)
chr3 (165-216)||(31372465-31372521)
chr3 (215-247)||(45139525-45139557)
chr3 (164-200)||(55140549-55140585)
[»] chr4 (48 HSPs)
chr4 (27-102)||(20224944-20225019)
chr4 (27-102)||(48598923-48598998)
chr4 (27-132)||(5648219-5648324)
chr4 (27-132)||(6430695-6430800)
chr4 (28-132)||(16408672-16408777)
chr4 (25-132)||(21646922-21647030)
chr4 (27-102)||(5306763-5306838)
chr4 (27-102)||(17315398-17315473)
chr4 (27-132)||(16911522-16911628)
chr4 (27-102)||(10660364-10660439)
chr4 (27-102)||(10874509-10874584)
chr4 (27-102)||(14590797-14590872)
chr4 (27-82)||(23501753-23501808)
chr4 (27-102)||(47528628-47528703)
chr4 (27-132)||(30639340-30639445)
chr4 (27-95)||(11054253-11054321)
chr4 (27-102)||(37494811-37494886)
chr4 (30-102)||(487235-487306)
chr4 (27-95)||(5313101-5313169)
chr4 (42-132)||(19027823-19027914)
chr4 (27-102)||(30352691-30352766)
chr4 (32-102)||(42164248-42164317)
chr4 (161-216)||(49268746-49268805)
chr4 (30-102)||(54640439-54640510)
chr4 (27-78)||(20405053-20405104)
chr4 (43-102)||(43035224-43035283)
chr4 (56-102)||(25463111-25463157)
chr4 (30-102)||(32629368-32629436)
chr4 (40-102)||(40915802-40915864)
chr4 (50-132)||(41018863-41018945)
chr4 (28-102)||(54966983-54967056)
chr4 (164-216)||(28972531-28972588)
chr4 (161-216)||(1763369-1763429)
chr4 (27-91)||(13256508-13256572)
chr4 (40-100)||(44363234-44363294)
chr4 (161-200)||(6377622-6377661)
chr4 (27-62)||(18969701-18969736)
chr4 (161-200)||(28185587-28185626)
chr4 (31-102)||(30496420-30496491)
chr4 (27-102)||(54730209-54730284)
chr4 (27-78)||(55766590-55766641)
chr4 (32-102)||(8473720-8473790)
chr4 (47-132)||(17043463-17043549)
chr4 (48-102)||(39077894-39077948)
chr4 (30-95)||(12257700-12257764)
chr4 (33-102)||(49938690-49938759)
chr4 (124-168)||(28185042-28185086)
chr4 (45-101)||(32478886-32478942)
[»] chr1 (53 HSPs)
chr1 (27-102)||(34725196-34725271)
chr1 (27-132)||(18944626-18944732)
chr1 (27-132)||(30395797-30395903)
chr1 (27-132)||(32632626-32632731)
chr1 (27-132)||(46991787-46991893)
chr1 (27-95)||(22930174-22930242)
chr1 (27-95)||(47214494-47214562)
chr1 (27-102)||(14617021-14617096)
chr1 (31-132)||(18724614-18724715)
chr1 (27-101)||(20004193-20004267)
chr1 (27-132)||(46248022-46248128)
chr1 (27-102)||(9939443-9939519)
chr1 (29-132)||(19932824-19932925)
chr1 (27-95)||(34714606-34714674)
chr1 (27-82)||(18742081-18742136)
chr1 (31-102)||(20036208-20036278)
chr1 (27-102)||(38478380-38478455)
chr1 (27-82)||(40424725-40424780)
chr1 (30-123)||(22327086-22327179)
chr1 (27-132)||(23768389-23768495)
chr1 (27-132)||(41319875-41319981)
chr1 (27-130)||(8197026-8197130)
chr1 (27-102)||(10668203-10668283)
chr1 (27-95)||(25290146-25290214)
chr1 (27-95)||(45812642-45812710)
chr1 (161-216)||(4447794-4447849)
chr1 (27-102)||(27201630-27201705)
chr1 (27-102)||(45402078-45402152)
chr1 (30-100)||(2435889-2435958)
chr1 (30-100)||(2435995-2436064)
chr1 (44-132)||(25468332-25468421)
chr1 (27-95)||(27474264-27474332)
chr1 (27-82)||(19414422-19414477)
chr1 (31-102)||(33222971-33223042)
chr1 (40-102)||(6925096-6925158)
chr1 (30-100)||(6983911-6983980)
chr1 (22-80)||(12126957-12127015)
chr1 (31-80)||(4430148-4430197)
chr1 (179-216)||(48814129-48814166)
chr1 (30-95)||(50811926-50811990)
chr1 (30-102)||(52910204-52910275)
chr1 (31-102)||(11596501-11596571)
chr1 (30-132)||(17470415-17470517)
chr1 (43-102)||(35117868-35117927)
chr1 (30-75)||(15511278-15511322)
chr1 (179-216)||(20270593-20270630)
chr1 (30-110)||(35019217-35019297)
chr1 (30-98)||(44485213-44485280)
chr1 (161-216)||(5153667-5153726)
chr1 (27-95)||(18335395-18335463)
chr1 (30-102)||(25554822-25554893)
chr1 (215-247)||(35005202-35005234)
chr1 (30-102)||(50760326-50760397)
[»] chr6 (26 HSPs)
chr6 (31-132)||(12221986-12222088)
chr6 (27-95)||(1346924-1346992)
chr6 (27-102)||(1354855-1354930)
chr6 (27-132)||(8409203-8409309)
chr6 (27-95)||(3815184-3815252)
chr6 (19-102)||(14975180-14975263)
chr6 (21-102)||(24734587-24734668)
chr6 (35-102)||(2166512-2166579)
chr6 (35-102)||(2178145-2178212)
chr6 (27-132)||(29355926-29356033)
chr6 (28-133)||(13905047-13905152)
chr6 (27-110)||(12063427-12063511)
chr6 (27-102)||(9161083-9161158)
chr6 (27-102)||(15866137-15866212)
chr6 (21-130)||(20400621-20400731)
chr6 (27-132)||(1941815-1941921)
chr6 (36-102)||(6024202-6024268)
chr6 (161-200)||(2979117-2979156)
chr6 (30-132)||(7947441-7947543)
chr6 (161-200)||(21038323-21038362)
chr6 (27-82)||(33922948-33923003)
chr6 (37-95)||(8417442-8417500)
chr6 (31-77)||(19649292-19649338)
chr6 (131-168)||(2978549-2978586)
chr6 (32-93)||(14553477-14553537)
chr6 (21-81)||(23930247-23930307)
[»] scaffold0187 (4 HSPs)
scaffold0187 (27-102)||(10148-10223)
scaffold0187 (27-102)||(20476-20551)
scaffold0187 (27-82)||(8905-8960)
scaffold0187 (27-82)||(19233-19288)
[»] scaffold0168 (1 HSPs)
scaffold0168 (27-102)||(30539-30614)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-132)||(58937-59043)
[»] scaffold0258 (1 HSPs)
scaffold0258 (27-102)||(13123-13198)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-102)||(226506-226581)
[»] scaffold0223 (1 HSPs)
scaffold0223 (28-102)||(11093-11166)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-96)||(83826-83904)
[»] scaffold0254 (1 HSPs)
scaffold0254 (35-102)||(4125-4192)
[»] scaffold0057 (2 HSPs)
scaffold0057 (27-82)||(24887-24942)
scaffold0057 (30-102)||(46794-46866)
[»] scaffold1176 (1 HSPs)
scaffold1176 (29-102)||(1685-1758)
[»] scaffold0311 (1 HSPs)
scaffold0311 (30-82)||(10773-10825)
[»] scaffold0116 (1 HSPs)
scaffold0116 (41-102)||(8865-8926)
[»] scaffold0194 (1 HSPs)
scaffold0194 (27-95)||(24624-24692)
[»] scaffold0031 (1 HSPs)
scaffold0031 (35-102)||(43097-43164)
[»] scaffold0242 (1 HSPs)
scaffold0242 (164-216)||(4232-4289)
[»] scaffold0018 (1 HSPs)
scaffold0018 (29-62)||(73001-73034)


Alignment Details
Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 14530278 - 14530384
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||||||||    
T  14530278 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctac 14530377  T
Q  126 gtacaat 132  Q
    |||||||    
T  14530378 gtacaat 14530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12024093 - 12023988
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  12024093 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 12023995  T
Q  126 gtacaat 132  Q
    |||||||    
T  12023994 gtacaat 12023988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 8455491 - 8455385
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||  | |||||||||| |    
T  8455491 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgc 8455392  T
Q  126 gtacaat 132  Q
    |||||||    
T  8455391 gtacaat 8455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 10543658 - 10543764
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  10543658 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgc 10543757  T
Q  126 gtacaat 132  Q
    |||||||    
T  10543758 gtacaat 10543764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 11514396 - 11514471
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  11514396 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctctt 11514471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 24200800 - 24200694
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||  |||||||||||||||||| ||||||| |||||| ||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  24200800 taaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 24200701  T
Q  126 gtacaat 132  Q
    |||||||    
T  24200700 gtacaat 24200694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 17667973 - 17668068
Alignment:
Q  38 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| |||||||| | |||||| | |||||||||| ||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17668068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 21779434 - 21779359
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||  ||||||| ||| ||||||    
T  21779434 taaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctctt 21779359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 23397726 - 23397801
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  23397726 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 23397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 25079893 - 25079818
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || | |||||||||||||    
T  25079893 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctctt 25079818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 42808528 - 42808583
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42808528 tggcccatttctatattcgggcctctcgggcccgggccggcccatttgacacctct 42808583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9671140 - 9671216
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||||||||| ||||||| || |||| |||||||||||| |||||||||||| ||||||    
T  9671140 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctctt 9671216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 17623535 - 17623630
Alignment:
Q  38 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||||||||||||| ||||| | ||| |||||||||||||||  |||| ||||||||||||| | |||||| | |||||||||| ||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17623630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 17896219 - 17896294
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||||||||||| ||||||| | |||||||||||| ||||  |||| |||||||||||||    
T  17896219 taaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctctt 17896294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 5450263 - 5450320
Alignment:
Q  45 taaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctctt 5450320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 22371017 - 22371090
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||  ||||||||||| ||||    
T  22371017 taaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc 22371090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 19977889 - 19977813
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctcttt 103  Q
    ||||||||||| ||||||| |||||||| ||||||| | |||||||||||||||||  | ||||||||| |||||||    
T  19977889 taaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttt 19977813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 25249912 - 25249844
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||    
T  25249912 taaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaaca 25249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 17705455 - 17705522
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 94  Q
    ||||||||| |||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||    
T  17705455 taaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaac 17705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 27573581 - 27573628
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtca 74  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 27573628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 40417031 - 40416940
Alignment:
Q  42 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||||||||| |||||||| | ||| ||||||  |||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaat 40416940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 7214494 - 7214600
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||| ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||  || ||||||||  ||||| | |||||  | |||||||||| |    
T  7214494 taactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgc 7214593  T
Q  126 gtacaat 132  Q
    |||||||    
T  7214594 gtacaat 7214600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 39914475 - 39914406
Alignment:
Q  33 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| |||||||||||||| ||||||| ||| ||||||||||| |||  | ||||||||||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctctt 39914406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 44521544 - 44521473
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||| |||||||||||||||| ||| ||||||||||||| ||||| ||| ||||||||| |||||    
T  44521544 ccttggcggaac-ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctctt 44521473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 14544023 - 14544098
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||| || ||| ||  | ||||||||| ||||||    
T  14544023 taaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctctt 14544098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 44604826 - 44604889
Alignment:
Q  39 aactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctctt 44604889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 24860157 - 24860087
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 101  Q
    |||||||||||||||||| ||||| ||||||| ||| ||||| ||||||| |   ||||||||||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctct 24860087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 19614981 - 19615058
Alignment:
Q  56 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||| |||||||||||||||||||  |||| |||||| |||||| |||||||| | ||||||| || ||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaat 19615058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 26827039 - 26826982
Alignment:
Q  164 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 216  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  26827039 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 26826982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 32781461 - 32781357
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 126  Q
    ||||||||||||| |||||||||||||   |||| |||||||||||||| |||||  ||  |||||||||||||| | |||||| | ||||||| || ||    
T  32781461 aaccttggcgcaa-tggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcg 32781363  T
Q  127 tacaat 132  Q
    ||||||    
T  32781362 tacaat 32781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 33795261 - 33795350
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaa 131  Q
    |||||||||||| ||| |||  ||||||||||||||||||  ||| ||||||||||||||   |||||| | |||||||||| |||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 44089183 - 44089236
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacct 214  Q
    |||||||||| |||||| |||||||||||| ||||||| | |||||||||||||    
T  44089183 tggcccatttatatagtcgggcctctcggggccgggccaggccatttgacacct 44089236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 99434 - 99363
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  |||| |||||| ||||||    
T  99434 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 99363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 5840988 - 5841056
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||||| |||| || |||||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  5840988 taaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaaca 5841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 10546153 - 10546229
Alignment:
Q  58 atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tat-aaaaagcggggtaaggctacgtacaat 132  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||| ||| ||||| | |||||||||| ||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaat 10546229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 17380407 - 17380336
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| |||  |||||||| ||||||| | |||||||||||||||||  || |||||||||||||||    
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctctt 17380336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 39189596 - 39189556
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctga 67  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  39189596 taaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 44643486 - 44643537
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||| |||||    
T  44643486 ccttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttca 44643537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 27466305 - 27466262
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaag 70  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||    
T  27466305 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 29420048 - 29419989
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||  || ||||||||||||| |||||  ||||||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctctt 29419989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 62
Target Start/End: Complemental strand, 39499385 - 39499354
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtg 62  Q
    ||||||||||||||||||||||||||||||||    
T  39499385 cttggcgcaactggtaaagttgttatcatgtg 39499354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 34752820 - 34752762
Alignment:
Q  44 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||| ||||||||||||| |||||||||||||  ||||  | ||||||||||||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagttctggaaacaacctctt 34752762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 38879541 - 38879647
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  38879541 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 38879640  T
Q  126 gtacaat 132  Q
    |||||||    
T  38879641 gtacaat 38879647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 1565391 - 1565466
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  1565391 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 1565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 4619281 - 4619175
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | |||||| | |||||| | |||||||||| |    
T  4619281 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgc 4619182  T
Q  126 gtacaat 132  Q
    |||||||    
T  4619181 gtacaat 4619175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 41014279 - 41014384
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  41014279 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 41014377  T
Q  126 gtacaat 132  Q
    |||||||    
T  41014378 gtacaat 41014384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 43334162 - 43334235
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||    
T  43334162 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 43334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 35710273 - 35710348
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  35710273 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 35710348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 37024729 - 37024654
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  37024729 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 37024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 24448850 - 24448956
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||| || | ||||||   |||||||||| |    
T  24448850 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgc 24448949  T
Q  126 gtacaat 132  Q
    |||||||    
T  24448950 gtacaat 24448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 8170157 - 8170053
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacg 126  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||| ||| |  ||| | |||||||||| ||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcct-tttgtgtaaaacagggtaaggctgcg 8170059  T
Q  127 tacaat 132  Q
    ||||||    
T  8170058 tacaat 8170053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 23974741 - 23974815
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  23974741 taaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctctt 23974815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27328712 - 27328818
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  27328712 taaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 27328811  T
Q  126 gtacaat 132  Q
    |||||||    
T  27328812 gtacaat 27328818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 22600414 - 22600483
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 96  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||||||    
T  22600414 taaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaa 22600483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 39301087 - 39301158
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||||||||||  || ||| |||||||||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctctt 39301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 22187245 - 22187320
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||| ||||||||||| ||||||||||| |||| || |||||||||||| |||| |  ||||||||||| ||||||    
T  22187245 taactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctctt 22187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 22861841 - 22861786
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||| |||||| |||||||||| ||||||| |||||||||||||| ||||    
T  22861841 taaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattca 22861786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 28516593 - 28516534
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctctt 28516534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 39079937 - 39079886
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||| |||||||||||| ||||||| | |||||||||||||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttca 39079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 12006500 - 12006430
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac-gggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| | |||||||| ||||||| |||||||||||| ||||||| |  ||||||||||||||||    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttca-agtctggaaacaacctctt 12006430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 31299592 - 31299667
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| |||||||||||||||||| ||||||| || | |||||||  |||||  |||| |||||| ||||||    
T  31299592 taaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctctt 31299667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 2838738 - 2838788
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctg-aaaggtcacg 76  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||||||    
T  2838738 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacg 2838788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 10634317 - 10634248
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||| |||||||  |||| |||||||||||    
T  10634317 ccttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctc 10634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 19438709 - 19438759
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 77  Q
    |||||||||||||||||||||||||||| |||| || || |||| ||||||    
T  19438709 taaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcacgg 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 32703413 - 32703459
Alignment:
Q  56 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  32703413 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 32703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 1405170 - 1405231
Alignment:
Q  50 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    ||||| ||||||| ||  |||||||||||||||  |||||||||||||||||| ||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaa 1405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 30006285 - 30006382
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 123  Q
    |||| |||||||||||| |||| ||||| ||||||| |||||||||||  | ||||  ||| | |||||||||||| |||||| | | ||||||||||    
T  30006285 taacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaacaacctcttatataaacaacagggtaaggct 30006382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 34375172 - 34375205
Alignment:
Q  164 cccatttctatagttgggcctctcgggcccgggc 197  Q
    |||||||||||||| |||||||||||||||||||    
T  34375172 cccatttctatagtcgggcctctcgggcccgggc 34375205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 35540634 - 35540667
Alignment:
Q  164 cccatttctatagttgggcctctcgggcccgggc 197  Q
    |||||||||||||| |||||||||||||||||||    
T  35540634 cccatttctatagtcgggcctctcgggcccgggc 35540667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 209098 - 209027
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| | |||||||||||| ||||||| || |||||||||  |||||  |||||| |||||||||||    
T  209098 ccttggcgcagc-ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctctt 209027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7136704 - 7136598
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  7136704 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgc 7136605  T
Q  126 gtacaat 132  Q
    |||||||    
T  7136604 gtacaat 7136598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 20869673 - 20869596
Alignment:
Q  25 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20869673 gataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20869596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 12670423 - 12670348
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  12670423 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 12670348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 30454270 - 30454195
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30454270 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30454195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 28817801 - 28817695
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  28817801 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 28817702  T
Q  126 gtacaat 132  Q
    |||||||    
T  28817701 gtacaat 28817695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 36720756 - 36720862
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  36720756 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 36720855  T
Q  126 gtacaat 132  Q
    |||||||    
T  36720856 gtacaat 36720862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 39461171 - 39461065
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  39461171 taaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 39461072  T
Q  126 gtacaat 132  Q
    |||||||    
T  39461071 gtacaat 39461065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 29521860 - 29521754
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||||||||| |||||||||| || |||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  29521860 taaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgc 29521761  T
Q  126 gtacaat 132  Q
    |||||||    
T  29521760 gtacaat 29521754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 44530109 - 44530215
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||| | ||||||| ||  |||||||||||||||  || ||||||||||||||| | |||||| | |||||||||| |    
T  44530109 taaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgc 44530208  T
Q  126 gtacaat 132  Q
    |||||||    
T  44530209 gtacaat 44530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 20284248 - 20284164
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  20284248 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 21070877 - 21070793
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  21070877 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 21070793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 28407379 - 28407451
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 28407451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 2626479 - 2626554
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  2626479 taaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 2626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 17823540 - 17823611
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 17823611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 24245411 - 24245478
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 94  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  24245411 taaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 6760786 - 6760888
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 129  Q
    |||||||||||||||||||||||| |||| || ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |||||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtac 6760885  T
Q  130 aat 132  Q
    |||    
T  6760886 aat 6760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 13160662 - 13160767
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||  |||| |||||| |||||| | |||||| | |||||||||| |    
T  13160662 taacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-cagggtaaggctgc 13160760  T
Q  126 gtacaat 132  Q
    |||||||    
T  13160761 gtacaat 13160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 22598133 - 22598223
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    |||||||||||| |||  || ||||||||||||||||||| ||||||||||||||||||| | |||||| | ||||||||||| |||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaat 22598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 35261639 - 35261745
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||   ||||||||||  ||||| | |||||| | |||||||| | |    
T  35261639 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgc 35261738  T
Q  126 gtacaat 132  Q
    |||||||    
T  35261739 gtacaat 35261745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 18164930 - 18164859
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  18164930 cttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 18164859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 8897939 - 8897833
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||| |||| ||||||||||||||||| ||||||| | | ||||||||||||| |  |||||||||||||| ||| | ||||||   ||||||||||||    
T  8897939 taaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 8897840  T
Q  126 gtacaat 132  Q
    |||||||    
T  8897839 gtacaat 8897833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 25250474 - 25250550
Alignment:
Q  19 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||||||  |||||  |||||||||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaaca 25250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 35105902 - 35105958
Alignment:
Q  46 aaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctctt 35105958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 44781677 - 44781606
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||  ||||||||||||||||||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctctt 44781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 45071225 - 45071330
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||  ||||||||||||||| |||||||  || |||||||||||||||  | ||||||||| |||||| | |||||| | |||||||||| |    
T  45071225 taaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 45071323  T
Q  126 gtacaat 132  Q
    |||||||    
T  45071324 gtacaat 45071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 31457155 - 31457208
Alignment:
Q  49 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctctt 31457208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 37698567 - 37698620
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||    
T  37698567 tggcccatttctatagtcgggcctc--ggggccgggccggcccatttgacacctct 37698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 11748259 - 11748353
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc-tttataaaaagcggggtaag 120  Q
    |||| |||| ||||||||| || ||||| ||||||| |||||| ||||||||||||  || |||||||| |||| ||| |||||||| |||||||    
T  11748259 taactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaag 11748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 42083870 - 42083806
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||| |||||| ||||| ||| ||| |||||||||||||||||||  |||||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 42083806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 18405319 - 18405374
Alignment:
Q  163 gcccatttctatagttgggcctctcgggcccgggccggc--ccatttgacacctct 216  Q
    ||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  18405319 gcccatttctatagtcgggcctctcgggcctgagccggcggccatttgacacctct 18405374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 27127153 - 27127213
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||| |||||||||||||     |||||| ||||||||||||||||||    
T  27127153 tggcccatttctatagtcgggcctctcgggcttgggccgggctggcccatttgacacctct 27127213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 31454152 - 31454216
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||||||| |||| ||||||| |||||||| |||||||||||  |||||| ||||| |||||    
T  31454152 cttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcacatgttcatgtcctgaaaaca 31454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 26954092 - 26954167
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||| |||||| || ||||||||||||| |||||||  |  |||||||||||||||  ||||||||||| ||||||    
T  26954092 taactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctctt 26954167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 12625858 - 12625924
Alignment:
Q  36 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||| || |||| ||   |||||||||| |||  ||||||||||||||||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctctt 12625924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 30232764 - 30232820
Alignment:
Q  164 cccatttctatagttgggcctctcgggcccgggccggcccatttgacacctctgcata 221  Q
    ||||||| | ||||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  30232764 cccatttatgtagttgggcctctcgagcc-gggccagcccatttgacacctctacata 30232820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 44598998 - 44598941
Alignment:
Q  164 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 216  Q
    |||||||||||||| |||||||||||| ||     |||||||||||||||||||||||    
T  44598998 cccatttctatagtcgggcctctcgggtccgggctgggccggcccatttgacacctct 44598941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 10730432 - 10730468
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggc 197  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10730432 tggcccatttctatagtcgggcctctcggacccgggc 10730468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 11001109 - 11001053
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct 99  Q
    |||||||||||| |||||||  ||||||||| |||||||| || ||| |||||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacct 11001053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 30962944 - 30962873
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| || ||||||||| |||||||  ||||||||||||  ||||  ||||||||||| ||||||    
T  30962944 ccttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctctt 30962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 46354154 - 46354260
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  46354154 taaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 46354253  T
Q  126 gtacaat 132  Q
    |||||||    
T  46354254 gtacaat 46354260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 11617762 - 11617657
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 126  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||| | |||||| | ||||||| || ||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcg 11617663  T
Q  127 tacaat 132  Q
    ||||||    
T  11617662 tacaat 11617657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 42496019 - 42495926
Alignment:
Q  18 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    |||||| | |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  42496019 catgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 2541195 - 2541091
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 124  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||     
T  2541195 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 2541096  T
Q  125 cgtac 129  Q
    |||||    
T  2541095 cgtac 2541091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 47078028 - 47077960
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47078028 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47077960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 48735296 - 48735220
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcc-tggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  48735296 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctctt 48735220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 21172182 - 21172107
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  21172182 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 21172107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 32758221 - 32758296
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  32758221 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 32758296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 10693245 - 10693171
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10693171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 35334999 - 35334921
Alignment:
Q  17 tcatgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||  |||||||||||    
T  35334999 tcatgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca 35334921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 42805484 - 42805590
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  42805484 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 42805583  T
Q  126 gtacaat 132  Q
    |||||||    
T  42805584 gtacaat 42805590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 43557432 - 43557538
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  43557432 taaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 43557531  T
Q  126 gtacaat 132  Q
    |||||||    
T  43557532 gtacaat 43557538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 7193045 - 7193120
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  7193045 taaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctctt 7193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 19427059 - 19426989
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 19426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 42798629 - 42798735
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||  ||||| | |||||| |  ||||||||| |    
T  42798629 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgc 42798728  T
Q  126 gtacaat 132  Q
    |||||||    
T  42798729 gtacaat 42798735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 47716419 - 47716525
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||| ||||||| |||||||||  |||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  47716419 taaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 47716518  T
Q  126 gtacaat 132  Q
    |||||||    
T  47716519 gtacaat 47716525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 14732997 - 14732924
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||  ||||||||||| ||||    
T  14732997 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctc 14732924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 27629596 - 27629669
Alignment:
Q  29 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||| |||| || | |||||||||||||||||  ||||||||||| ||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 27629669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 48123655 - 48123584
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctctt 48123584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 5180332 - 5180257
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  | ||||||||| ||||||    
T  5180332 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctctt 5180257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 7794681 - 7794606
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  7794681 taaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 18326994 - 18327069
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||| ||||||| ||||||    
T  18326994 taaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctctt 18327069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 33872070 - 33872009
Alignment:
Q  41 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 33872009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 1424085 - 1424017
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||| ||||||||||||||||||||||| | ||||| ||| |||||||||| |||| ||||||||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaaca 1424017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 12473267 - 12473339
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||| ||||||  ||||||||||| |||||||  ||||| ||||||||||||    
T  12473267 ccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctctt 12473339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 40463836 - 40463892
Alignment:
Q  26 ataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||    
T  40463836 ataaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttca 40463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 28362316 - 28362214
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 128  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||  |||| |||||  |||||| | |||||| |  ||||||||| ||||    
T  28362316 ccttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgta 28362218  T
Q  129 caat 132  Q
    ||||    
T  28362217 caat 28362214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 16341254 - 16341344
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    |||||||||||||||||||   ||||||||||||||||||  | || |||||| |||||| | |||||| | |||||||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaat 16341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 22699145 - 22699079
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 93  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||| | |||||||  |||||||||    
T  22699145 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaa 22699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 13805066 - 13805128
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 93  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||  |||||||||    
T  13805066 ccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 34626382 - 34626309
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||| ||| | ||||  ||||||||||| ||||    
T  34626382 taaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctc 34626309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 28078306 - 28078238
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||| |||||||||| || |||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  28078306 taaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 29140531 - 29140487
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 75  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  29140531 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcac 29140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 42476833 - 42476901
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||||||||| ||||  | |||||||||    
T  42476833 taacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaaca 42476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 6736867 - 6736934
Alignment:
Q  44 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaa 6736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 19265781 - 19265830
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||| |||||||||||| ||| ||| |||||||||||||||||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttca 19265830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 29907393 - 29907454
Alignment:
Q  43 ggtaaagttgtt--atcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||  |||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 29907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 42391251 - 42391205
Alignment:
Q  49 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||| ||||||| |||||||||||||||||||  |||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 42391205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 3469350 - 3469306
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 75  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||    
T  3469350 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcac 3469306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 7644931 - 7644991
Alignment:
Q  42 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| ||||| | | ||| |||||||||||||||||||  ||||||||||| ||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 7644991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 31591247 - 31591207
Alignment:
Q  62 ggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  31591247 ggctgaaaggtcacgagttcaagtcctggaaacaacctctt 31591207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 45261872 - 45261904
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggccc 193  Q
    ||||||||||||||||| |||||||||||||||    
T  45261872 tggcccatttctatagtcgggcctctcgggccc 45261904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 8247864 - 8247758
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||| | |    
T  8247864 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgc 8247765  T
Q  126 gtacaat 132  Q
    |||||||    
T  8247764 gtacaat 8247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 29366897 - 29366791
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  29366897 taaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 29366798  T
Q  126 gtacaat 132  Q
    |||||||    
T  29366797 gtacaat 29366791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 40272987 - 40272881
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  40272987 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 40272888  T
Q  126 gtacaat 132  Q
    |||||||    
T  40272887 gtacaat 40272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 46421212 - 46421106
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  46421212 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 46421113  T
Q  126 gtacaat 132  Q
    |||||||    
T  46421112 gtacaat 46421106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 10870126 - 10870051
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10870126 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10870051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 13730779 - 13730673
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  13730779 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 13730680  T
Q  126 gtacaat 132  Q
    |||||||    
T  13730679 gtacaat 13730673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 52926385 - 52926310
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  52926385 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 52926310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 5173896 - 5173820
Alignment:
Q  27 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5173896 taaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 5173820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 7697060 - 7696992
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||||||||||    
T  7697060 taaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaaca 7696992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 1217072 - 1217147
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  1217072 taaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctctt 1217147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 13628968 - 13628861
Alignment:
Q  27 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 124  Q
    |||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  13628968 taaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 13628869  T
Q  125 cgtacaat 132  Q
    ||||||||    
T  13628868 cgtacaat 13628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 16735423 - 16735528
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||  |||| |||||| |||||| || ||||| | |||||||||| |    
T  16735423 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaa-cagggtaaggctgc 16735521  T
Q  126 gtacaat 132  Q
    |||||||    
T  16735522 gtacaat 16735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 35417902 - 35417973
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||||||||| ||||||    
T  35417902 ccttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctctt 35417973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9607185 - 9607260
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||  ||||||  ||||||||||| ||||||    
T  9607185 taaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctctt 9607260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 26573113 - 26573215
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 128  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||| || | |||||| | |||||||||| ||||    
T  26573113 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgta 26573211  T
Q  129 caat 132  Q
    ||||    
T  26573212 caat 26573215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 26869696 - 26869763
Alignment:
Q  34 ggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 101  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct 26869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 4495839 - 4495733
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||| ||| | ||| || | |||||| | |||||||||| |    
T  4495839 taaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgc 4495740  T
Q  126 gtacaat 132  Q
    |||||||    
T  4495739 gtacaat 4495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12914210 - 12914104
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| | ||||| | ||||||||||  |||||  ||||||||||| |||||| | |||||| | |||||||||  |    
T  12914210 taaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggc 12914111  T
Q  126 gtacaat 132  Q
    |||||||    
T  12914110 gtacaat 12914104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 22123090 - 22123022
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||||| ||||||||  |||||||||||    
T  22123090 taaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22123022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 34420815 - 34420716
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 128  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| ||||    
T  34420815 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 34420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 9144865 - 9144810
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  9144865 tggcccatttctataggcaggcctctcgggctcgggccggcccatttgacacctct 9144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 39203498 - 39203573
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||||  |||| |||||| ||||||    
T  39203498 taaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctctt 39203573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 22609749 - 22609853
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  22609749 taaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 22609846  T
Q  126 gtacaat 132  Q
    |||||||    
T  22609847 gtacaat 22609853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 25517350 - 25517300
Alignment:
Q  25 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 75  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25517350 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 45621000 - 45620929
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  | ||||||||| ||||||    
T  45621000 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctctt 45620929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 50462768 - 50462708
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  50462768 tggcccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 50462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 12525392 - 12525486
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 123  Q
    ||||||||||||||||||||||||||   |||| || |||||||||||| |||||   ||||||||||| |||||| | |||||| | ||||||||||    
T  12525392 taaccttggcgcaactggtaaagttg---tcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 6411996 - 6411891
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||| ||||||||||||||||||| ||||||  |||| |||||| |||||||  || || ||||| |||||| | |||||| | |||||||||| |    
T  6411996 taaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6411898  T
Q  126 gtacaat 132  Q
    |||||||    
T  6411897 gtacaat 6411891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 516420 - 516497
Alignment:
Q  56 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| || |||||    
T  516420 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaat 516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 29322878 - 29322821
Alignment:
Q  164 cccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    |||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  29322878 cccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 29322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 45949012 - 45948938
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaa---aggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| ||| |||||||| ||||||| |||||   ||||||||||||||  ||||||||||||||||||    
T  45949012 ccttggcgcaac-ggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctctt 45948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 53062036 - 53062093
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 54032705 - 54032628
Alignment:
Q  56 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| | ||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaat 54032628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 30928302 - 30928247
Alignment:
Q  47 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||| || ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30928247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 53996737 - 53996635
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 128  Q
    ||||||||| || |||||| ||||| |||| || ||||||||||||| |||||  || ||||||||||||||| | |||||| | |||||||||| | ||    
T  53996737 ccttggcgctac-ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgctta 53996639  T
Q  129 caat 132  Q
    ||||    
T  53996638 caat 53996635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 21875002 - 21875070
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||||||||||| ||||||| |||       ||||||||| || ||||||||||||||||    
T  21875002 taaccttgacgcaactggtaaagttgttgtcatgtgactg-------acgggttcaaattctggaaacaacctctt 21875070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 25944455 - 25944518
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 94  Q
    |||||||||||| | |||||||||| ||| ||| ||||||||||| |||||||  ||||||||||    
T  25944455 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaac 25944518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 31372521 - 31372465
Alignment:
Q  165 ccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    ||||||||||||| ||||||||||| |     |||||||||||||||||||||||||    
T  31372521 ccatttctatagtcgggcctctcggacccgagccgggccggcccatttgacacctct 31372465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 45139557 - 45139525
Alignment:
Q  215 ctgcatacaatacaccaaaaatagtgggacccc 247  Q
    |||||||||||||||||||||| ||||||||||    
T  45139557 ctgcatacaatacaccaaaaatggtgggacccc 45139525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 55140549 - 55140585
Alignment:
Q  164 cccatttctatagttgggcctctcgggcccgggccgg 200  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  55140549 cccatttctatagtcgggcctctcggacccgggccgg 55140585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 20224944 - 20225019
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  20224944 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctctt 20225019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 48598998 - 48598923
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  48598998 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 48598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 5648219 - 5648324
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  5648219 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 5648317  T
Q  126 gtacaat 132  Q
    |||||||    
T  5648318 gtacaat 5648324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 6430800 - 6430695
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  6430800 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6430702  T
Q  126 gtacaat 132  Q
    |||||||    
T  6430701 gtacaat 6430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 16408777 - 16408672
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 126  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||| || ||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  127 tacaat 132  Q
    ||||||    
T  16408677 tacaat 16408672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 21646922 - 21647030
Alignment:
Q  25 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 123  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||| |||||| | ||||||   ||||||||||    
T  21646922 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggct 21647021  T
Q  124 acgtacaat 132  Q
     ||||||||    
T  21647022 gcgtacaat 21647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 5306838 - 5306763
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  5306838 taaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 5306763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 17315473 - 17315398
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  17315473 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctctt 17315398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 16911522 - 16911628
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||| |||||| |||||| | || ||| | |||||||||| |    
T  16911522 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgc 16911621  T
Q  126 gtacaat 132  Q
    |||||||    
T  16911622 gtacaat 16911628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10660364 - 10660439
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10660364 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10660439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10874509 - 10874584
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10874509 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 14590797 - 14590872
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  14590797 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 14590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 23501753 - 23501808
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  23501753 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttca 23501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 47528703 - 47528628
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  47528703 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 47528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 30639340 - 30639445
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  30639340 taaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaa-cagggtaaggctgc 30639438  T
Q  126 gtacaat 132  Q
    |||||||    
T  30639439 gtacaat 30639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 11054321 - 11054253
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||    
T  11054321 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaaca 11054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 37494811 - 37494886
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| ||||||||||||||||||  |||| | |||||||||||| ||||||  ||||||||||||||||||    
T  37494811 taaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctctt 37494886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 487306 - 487235
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||| |||||||||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  487306 ccttggcgtaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 487235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 5313169 - 5313101
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||  ||||| |||||    
T  5313169 taaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 19027823 - 19027914
Alignment:
Q  42 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||| ||||||| ||| ||| |||||||||||||||||||  ||||||||||||| |||| | |||||| | |||||||||| ||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaat 19027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 30352766 - 30352691
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||    ||||||||||| ||||||    
T  30352766 taaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctctt 30352691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 42164317 - 42164248
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| |||||| ||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 42164248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 49268805 - 49268746
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggc----ccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  49268805 tggcccatttctatagtcgggcctctcgggctaggccgggccggcccatttgacacctct 49268746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 54640510 - 54640439
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  54640510 ccttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctctt 54640439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 20405053 - 20405104
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 78  Q
    |||||||| ||||||||||||||||||| ||||||| ||| |||||||||||    
T  20405053 taaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 43035224 - 43035283
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||| ||||||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctctt 43035283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 25463111 - 25463157
Alignment:
Q  56 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  25463111 tcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 25463157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 32629436 - 32629368
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| |||||||||||   |||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  32629436 ccttggcgcaac-ggtaaagttgt---catgtgactgaaaggtcacgggttcaaatcctcgaaacagcctctt 32629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 40915802 - 40915864
Alignment:
Q  40 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| ||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctctt 40915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 41018945 - 41018863
Alignment:
Q  50 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgtacaat 132  Q
    ||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    ||||   |||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaat 41018863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 54966983 - 54967056
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||  |||||  | ||||||| ||||||||    
T  54966983 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctctt 54967056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 28972588 - 28972531
Alignment:
Q  164 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 216  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  28972588 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 28972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 1763429 - 1763369
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  1763429 tggcccatttcaatagtcgggcctctcgggcccgagccgggccggcccatttgacacctct 1763369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 13256572 - 13256508
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctgga 91  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||  ||||||  |||||||    
T  13256572 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 44363294 - 44363234
Alignment:
Q  40 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||  ||||| ||||| ||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctc 44363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 6377622 - 6377661
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccgg 200  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  6377622 tggcccatttctatagtcgggcctctcgggcccgagccgg 6377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 18969701 - 18969736
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtg 62  Q
    |||||||||||||||||||||||||||| |||||||    
T  18969701 taaccttggcgcaactggtaaagttgttgtcatgtg 18969736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 28185587 - 28185626
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccgg 200  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  28185587 tggcccatttctatagtcgggcctctcgggcccgagccgg 28185626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 30496491 - 30496420
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||  ||||||||| ||| ||| ||||||||||||| |||||  || |||||||| ||||||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctctt 30496420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 54730209 - 54730284
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||| |||||||||  |||||||||||| ||||||| |  ||||||||||||||||  |||| |||||| ||||||    
T  54730209 taactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctctt 54730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 55766641 - 55766590
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 78  Q
    |||||||| ||||||||||||||||||| ||||||| | | |||||||||||    
T  55766641 taaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggg 55766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 8473790 - 8473720
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||||||| |||| || | | |||||  ||||||||  ||||||||||| ||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctctt 8473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 17043549 - 17043463
Alignment:
Q  47 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    |||||||| ||| ||| |||||||||||| ||||||  ||||||||||| |||||| | |||||  | |||||||||| ||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaat 17043463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 39077948 - 39077894
Alignment:
Q  48 agttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| |||||||  ||||||||||||||||||  ||||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctctt 39077894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 12257764 - 12257700
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||| |||||| |||||||||||| ||| |||  |||||||||||||||||| ||||| ||||||    
T  12257764 ccttgacgcaac-ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaaca 12257700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 49938759 - 49938690
Alignment:
Q  33 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||| |  ||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 49938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 28185042 - 28185086
Alignment:
Q  124 acgtacaattagagctgtcaaaaatgagccggtccattggcccat 168  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||||    
T  28185042 acgtagaagtagagctgtcaaaaatgggccggcccattggcccat 28185086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 32478942 - 32478886
Alignment:
Q  45 taaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 101  Q
    |||||||||| ||||||| | || ||||||| ||||||  |||||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctct 32478886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 34725271 - 34725196
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  34725271 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 34725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 18944626 - 18944732
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||   |||||||||| |||||| | |||||| | |||||||||| |    
T  18944626 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 18944725  T
Q  126 gtacaat 132  Q
    |||||||    
T  18944726 gtacaat 18944732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 30395903 - 30395797
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  126 gtacaat 132  Q
    |||||||    
T  30395803 gtacaat 30395797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 32632731 - 32632626
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  32632731 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 32632633  T
Q  126 gtacaat 132  Q
    |||||||    
T  32632632 gtacaat 32632626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 46991787 - 46991893
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | ||||||||||      
T  46991787 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgt 46991886  T
Q  126 gtacaat 132  Q
    |||||||    
T  46991887 gtacaat 46991893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 22930242 - 22930174
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||||||||||    
T  22930242 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 22930174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 47214494 - 47214562
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47214494 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 14617021 - 14617096
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||||    
T  14617021 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctctt 14617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 18724715 - 18724614
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 129  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||  ||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtac 18724617  T
Q  130 aat 132  Q
    |||    
T  18724616 aat 18724614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 20004267 - 20004193
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 101  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||    
T  20004267 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctct 20004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 46248128 - 46248022
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||  || |||||||| |||||| | |||||| | ||||||| || |    
T  46248128 taaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgc 46248029  T
Q  126 gtacaat 132  Q
    |||||||    
T  46248028 gtacaat 46248022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9939443 - 9939519
Alignment:
Q  27 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||| |||||| ||||||| ||||||||||||| |||||  ||||||||||||||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctctt 9939519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 19932925 - 19932824
Alignment:
Q  29 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgta 128  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |  |||| ||||||| | | |||||| | |||||||||| ||||    
T  19932925 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacctttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  129 caat 132  Q
    ||||    
T  19932827 caat 19932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 34714606 - 34714674
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||  || ||||||||    
T  34714606 taaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 18742136 - 18742081
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  18742136 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttca 18742081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 20036208 - 20036278
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||  |||||||||||| |||||    
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactctt 20036278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 38478455 - 38478380
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  38478455 taaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 38478380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 40424725 - 40424780
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  40424725 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttca 40424780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 22327086 - 22327179
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 123  Q
    |||||||||||| || ||||||||| ||||||| |||||||||| ||||||||  |||||||||||||||||| | |||||| | ||||||||||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 23768495 - 23768389
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||| | ||||||||||||||||||| ||||||| ||| |||||||| ||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  23768495 taacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgc 23768396  T
Q  126 gtacaat 132  Q
    |||||||    
T  23768395 gtacaat 23768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 41319981 - 41319875
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||| | ||||||||||||||||| ||||||| |||||||||||| |||| |  |||||||||||  ||||| | |||||| | |||||||||| |    
T  41319981 taaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 41319882  T
Q  126 gtacaat 132  Q
    |||||||    
T  41319881 gtacaat 41319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 8197026 - 8197130
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||  |||||| ||   |||||| | |||||| |  |||||||||||    
T  8197026 taaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctac 8197125  T
Q  126 gtaca 130  Q
    |||||    
T  8197126 gtaca 8197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10668203 - 10668283
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatc-----atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||     ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10668203 taaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 25290146 - 25290214
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  || ||||||||    
T  25290146 taaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 45812710 - 45812642
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||  ||||| |||||    
T  45812710 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 45812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 4447794 - 4447849
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  4447794 tggcccatttctatagtcgggcctcttaggcccgagccggcccatttgacacctct 4447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 27201630 - 27201705
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||| ||| || ||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  27201630 taaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 27201705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 45402078 - 45402152
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| |||||| | || ||||| |||||||||  ||||||||||| ||||||    
T  45402078 taaccttggcgcaactggtaaagttgttgtcatgt-gatggaaggtaacgggttcaagtcctggaaacagcctctt 45402152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 2435958 - 2435889
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 2435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 2436064 - 2435995
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    |||||| ||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||    
T  2436064 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctc 2435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 25468421 - 25468332
Alignment:
Q  44 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 132  Q
    ||||||||||| |||||||  |||||||||| |||||||  |||||||||||||||||| | |||||| | |||||||| | ||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaat 25468332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 27474264 - 27474332
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    ||||||| || ||||||||||||||||| ||||||| |||||||||||| ||||||  || ||||||||    
T  27474264 taaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaaca 27474332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 19414422 - 19414477
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    ||||||||||| || ||||||||||||| |||| || |||||||||||||||||||    
T  19414422 taaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttca 19414477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 33222971 - 33223042
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| || |  || |||||||| ||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctctt 33223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 6925096 - 6925158
Alignment:
Q  40 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | ||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctctt 6925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 6983980 - 6983911
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 100  Q
    ||||||||||| ||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc 6983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 12127015 - 12126957
Alignment:
Q  22 agagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 80  Q
    |||| |||||||||||||||| ||||||||||| ||||||   ||||||||||||||||    
T  12127015 agagttaaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtt 12126957  T

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Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 4430197 - 4430148
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 80  Q
    ||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  4430197 cttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtt 4430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 48814166 - 48814129
Alignment:
Q  179 gggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48814166 gggcctcgcgggcccgggccggcccatttgacacctct 48814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 50811926 - 50811990
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||||||  |||| |||||||||||    
T  50811926 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaaca 50811990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 52910204 - 52910275
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||  || |||||||| ||||||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 11596501 - 11596571
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| |||||||| | | ||||||| |||||| ||||||||||||  |||| |||||||||||||    
T  11596501 cttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctctt 11596571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 17470517 - 17470415
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 128  Q
    |||||| ||||| |||||||||||| ||| ||| ||||| ||||| |||||||  |||| |||||| |||||| | |||||| | |||||||||| ||||    
T  17470517 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 17470419  T
Q  129 caat 132  Q
    ||||    
T  17470418 caat 17470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 35117927 - 35117868
Alignment:
Q  43 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||||||||| | ||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctctt 35117868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 15511322 - 15511278
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 75  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  15511322 ccttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcac 15511278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 20270630 - 20270593
Alignment:
Q  179 gggcctctcgggcccgggccggcccatttgacacctct 216  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  20270630 gggcctctcgggctcgggccagcccatttgacacctct 20270593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 35019217 - 35019297
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    |||||||||||| |||||||||||| |||  || |||||||||||| | ||||  ||||| |||||||||||| ||||||||    
T  35019217 ccttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaa 35019297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 44485280 - 44485213
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcata-tcctggaaacaacc 98  Q
    |||||||||||| | |||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||    
T  44485280 ccttggcgcaacag-taaagttgttgtcatgtgattgaaaggtcacgggtt-atagtcctggaaacaacc 44485213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 5153726 - 5153667
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 216  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  5153726 tggcccatttc-atagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 5153667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 18335463 - 18335395
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||| || ||||||| || ||||||| ||||||||||||  ||| |  |||||||||||    
T  18335463 taaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaaca 18335395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 25554893 - 25554822
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| ||||||||||||| ||| ||| || ||||| |||| ||| |  ||||||||||||||||||    
T  25554893 ccttggcgcaa-tggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctctt 25554822  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 35005202 - 35005234
Alignment:
Q  215 ctgcatacaatacaccaaaaatagtgggacccc 247  Q
    |||||||||||||||||||||| ||||||||||    
T  35005202 ctgcatacaatacaccaaaaatggtgggacccc 35005234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 50760397 - 50760326
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||  |||||||| ||| ||||||| |||| ||||||||||||||  ||||| ||||| ||||||    
T  50760397 ccttggcgcaaa-ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctctt 50760326  T

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Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 12222088 - 12221986
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 129  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  130 aat 132  Q
    |||    
T  12221988 aat 12221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 1346924 - 1346992
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  1346924 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 1346992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 1354930 - 1354855
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  1354930 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctctt 1354855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 8409203 - 8409309
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  8409203 taaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgc 8409302  T
Q  126 gtacaat 132  Q
    |||||||    
T  8409303 gtacaat 8409309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 3815252 - 3815184
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||    
T  3815252 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaaca 3815184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 14975263 - 14975180
Alignment:
Q  19 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||  ||||||||||| ||||||    
T  14975263 atgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctctt 14975180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 24734587 - 24734668
Alignment:
Q  21 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||   ||||| ||||| |||||||||||||    
T  24734587 gagaggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctctt 24734668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 2166579 - 2166512
Alignment:
Q  35 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2166512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 2178212 - 2178145
Alignment:
Q  35 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2178145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 29356033 - 29355926
Alignment:
Q  27 taaccttggcgcaactggtaaag-ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 124  Q
    |||||||||| |||||||||||  ||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  29356033 taaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 29355934  T
Q  125 cgtacaat 132  Q
    ||||||||    
T  29355933 cgtacaat 29355926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 13905152 - 13905047
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 126  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||  ||||| |||| ||||||| | |||||| | |||||||||| |     
T  13905152 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgca 13905054  T
Q  127 tacaatt 133  Q
    |||||||    
T  13905053 tacaatt 13905047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 12063427 - 12063511
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 110  Q
    ||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||  |||| |||| | |||||| ||||||||    
T  12063427 taaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9161083 - 9161158
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| |||||  |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  9161083 taaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 9161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 15866212 - 15866137
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||| |||||||||||||||||  ||||||  |||||||||| |||||||  ||||||||||| ||||||    
T  15866212 taaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctctt 15866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 20400621 - 20400731
Alignment:
Q  21 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaa 119  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||| |||||||||||| ||||||  |  ||||||||| ||||| | |||||| | ||||||    
T  20400621 gagaggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaa 20400720  T
Q  120 ggctacgtaca 130  Q
    | || ||||||    
T  20400721 gactgcgtaca 20400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 1941815 - 1941921
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||| |||||||||||||||||| |||| || ||| |||||| ||| || |  || || |||||||||||| | |||||| | |||||||||| |    
T  1941815 taaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgc 1941914  T
Q  126 gtacaat 132  Q
    |||||||    
T  1941915 gtacaat 1941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 6024202 - 6024268
Alignment:
Q  36 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||| |||||||  || |||||||||| |||| ||||| |||||| ||||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctctt 6024268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 2979117 - 2979156
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccgg 200  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  2979117 tggcccatttctatagtcgggcctctcgggctcgggccgg 2979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 7947543 - 7947441
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 128  Q
    |||||||||||| |||||||||| | |   ||| |||||||||||| ||||||  ||||||||||||||| || | |||||| | |||||||||| ||||    
T  7947543 ccttggcgcaac-ggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgta 7947445  T
Q  129 caat 132  Q
    ||||    
T  7947444 caat 7947441  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 21038362 - 21038323
Alignment:
Q  161 tggcccatttctatagttgggcctctcgggcccgggccgg 200  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  21038362 tggcccatttctatagtcgggcctctcgggcccgagccgg 21038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 33923003 - 33922948
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    ||||||||||||||| |||||||||||| |||| || |||||| ||||| ||||||    
T  33923003 taaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttca 33922948  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 8417442 - 8417500
Alignment:
Q  37 gcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||||  || ||||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaaca 8417500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 19649338 - 19649292
Alignment:
Q  31 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 77  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||    
T  19649338 cttggcgcaactgataaagttgttgtcatgtgactgaaagatcacgg 19649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 2978549 - 2978586
Alignment:
Q  131 attagagctgtcaaaaatgagccggtccattggcccat 168  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2978549 attagagctgtcaaaaatgggccggtccattgtcccat 2978586  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 14553477 - 14553537
Alignment:
Q  32 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 93  Q
    |||| |||||||||||||||||| ||||||| || ||||||||| ||||||  |||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaa 14553537  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 23930307 - 23930247
Alignment:
Q  21 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttc 81  Q
    ||||| ||||||||||||||||  ||||| |||| ||||||| || |||||||||| ||||    
T  23930307 gagaggtaaccttggcgcaactcataaagatgttgtcatgtgtctcaaaggtcacgagttc 23930247  T

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Target: scaffold0187 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 10223 - 10148
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10223 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10148  T

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Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 20551 - 20476
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20551 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20476  T

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Target: scaffold0187; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 8905 - 8960
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  8905 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 19233 - 19288
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  19233 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 19288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 30539 - 30614
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  30539 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 30614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 58937 - 59043
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 125  Q
    ||||||||| |||||||||||| || || ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||| || |    
T  58937 taaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgc 59036  T
Q  126 gtacaat 132  Q
    |||||||    
T  59037 gtacaat 59043  T

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Target: scaffold0258 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 13198 - 13123
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  13198 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 13123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 226581 - 226506
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  226581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 226506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 11093 - 11166
Alignment:
Q  28 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 11166  T

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Target: scaffold0024 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 83826 - 83904
Alignment:
Q  18 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 96  Q
    |||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  || |||||||||    
T  83826 catgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

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Target: scaffold0254 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 4125 - 4192
Alignment:
Q  35 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 4192  T

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Target: scaffold0057 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 24942 - 24887
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  24942 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttca 24887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 46794 - 46866
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||| ||||||||||||| ||||||| ||  |||||||||||||||  | ||||||||||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctctt 46866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 1758 - 1685
Alignment:
Q  29 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||||||| |||||||  ||||| ||||||||||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctctt 1685  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 10773 - 10825
Alignment:
Q  30 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 82  Q
    |||||| |||||||||||||||||| ||||||| ||| |||||||||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttca 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 8865 - 8926
Alignment:
Q  41 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||| ||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttctt 8926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 24624 - 24692
Alignment:
Q  27 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 95  Q
    |||||||||| ||| || |||||||||| ||| ||| ||| |||||||||||||||  |||||||||||    
T  24624 taaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 43097 - 43164
Alignment:
Q  35 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 102  Q
    ||||||||||||||||| || |||||||  |||||||||||| |||||  |||| |||||| ||||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctctt 43164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 4232 - 4289
Alignment:
Q  164 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 216  Q
    |||||||||||||| |||| ||||||||||     |||||||||||||||||||||||    
T  4232 cccatttctatagtcgggcttctcgggcccgggctgggccggcccatttgacacctct 4289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  29 accttggcgcaactggtaaagttgttatcatgtg 62  Q
    |||||||||||||||||||||||||| |||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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