View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2961_low_7 (Length: 378)

Name: NF2961_low_7
Description: NF2961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2961_low_7
NF2961_low_7
[»] chr8 (38 HSPs)
chr8 (20-322)||(30883129-30883433)
chr8 (20-322)||(2952220-2952519)
chr8 (20-321)||(5860744-5861042)
chr8 (20-322)||(3048516-3048820)
chr8 (170-362)||(41879133-41879325)
chr8 (170-322)||(13534686-13534837)
chr8 (170-322)||(13624226-13624377)
chr8 (170-322)||(45475769-45475921)
chr8 (169-322)||(23606628-23606781)
chr8 (169-321)||(23798261-23798413)
chr8 (170-322)||(10917343-10917495)
chr8 (170-315)||(42600734-42600879)
chr8 (198-322)||(37430157-37430281)
chr8 (219-322)||(5973106-5973209)
chr8 (219-322)||(7944521-7944624)
chr8 (219-322)||(11290185-11290288)
chr8 (219-321)||(39332405-39332507)
chr8 (219-322)||(15167414-15167517)
chr8 (219-299)||(5942697-5942777)
chr8 (219-322)||(41677172-41677276)
chr8 (219-314)||(8102913-8103008)
chr8 (224-322)||(34789861-34789959)
chr8 (227-322)||(8646215-8646309)
chr8 (219-322)||(15078759-15078862)
chr8 (242-321)||(30674403-30674482)
chr8 (219-313)||(5721560-5721654)
chr8 (219-321)||(14509983-14510084)
chr8 (219-320)||(25561496-25561595)
chr8 (242-317)||(23941095-23941170)
chr8 (20-66)||(20003877-20003923)
chr8 (222-321)||(34048705-34048806)
chr8 (276-321)||(9108551-9108596)
chr8 (275-321)||(34868177-34868223)
chr8 (270-322)||(38009151-38009203)
chr8 (20-66)||(37430302-37430348)
chr8 (20-66)||(41878184-41878230)
chr8 (20-66)||(45472210-45472256)
chr8 (255-291)||(5757117-5757153)
[»] chr6 (33 HSPs)
chr6 (20-322)||(21479303-21479601)
chr6 (20-322)||(21280352-21280652)
chr6 (20-322)||(13727398-13727696)
chr6 (80-314)||(33773982-33774216)
chr6 (170-322)||(19737691-19737843)
chr6 (169-362)||(27788647-27788840)
chr6 (180-315)||(28075748-28075883)
chr6 (170-315)||(17353909-17354054)
chr6 (169-322)||(20711719-20711872)
chr6 (198-313)||(24711007-24711122)
chr6 (170-322)||(34397812-34397964)
chr6 (198-313)||(30832532-30832647)
chr6 (223-321)||(1155849-1155947)
chr6 (169-315)||(235230-235377)
chr6 (219-318)||(6159442-6159541)
chr6 (219-318)||(2477587-2477686)
chr6 (241-322)||(27314177-27314259)
chr6 (219-314)||(20611794-20611889)
chr6 (219-310)||(21183686-21183777)
chr6 (236-321)||(30121783-30121868)
chr6 (20-66)||(23070890-23070936)
chr6 (170-263)||(19987116-19987209)
chr6 (220-298)||(4036953-4037031)
chr6 (20-66)||(12083641-12083687)
chr6 (20-66)||(19741224-19741270)
chr6 (20-66)||(30832668-30832714)
chr6 (20-66)||(24711143-24711189)
chr6 (20-58)||(27314773-27314811)
chr6 (20-66)||(1156018-1156064)
chr6 (20-58)||(27579084-27579122)
chr6 (20-66)||(33773919-33773964)
chr6 (221-265)||(27994775-27994819)
chr6 (20-66)||(19986985-19987031)
[»] chr3 (48 HSPs)
chr3 (20-322)||(54619202-54619500)
chr3 (20-315)||(27078575-27078865)
chr3 (20-315)||(27084372-27084662)
chr3 (20-322)||(38681092-38681394)
chr3 (20-322)||(36716024-36716322)
chr3 (170-362)||(3953854-3954047)
chr3 (170-322)||(18372434-18372590)
chr3 (142-286)||(29620423-29620567)
chr3 (198-322)||(21582754-21582878)
chr3 (170-322)||(34290635-34290787)
chr3 (170-322)||(53506883-53507035)
chr3 (169-322)||(43207237-43207389)
chr3 (170-314)||(8073345-8073488)
chr3 (170-314)||(44708432-44708576)
chr3 (198-313)||(47467667-47467782)
chr3 (170-322)||(54407157-54407308)
chr3 (170-322)||(37168322-37168474)
chr3 (198-322)||(53149313-53149437)
chr3 (169-322)||(9878686-9878839)
chr3 (198-322)||(42098784-42098908)
chr3 (169-315)||(50939239-50939385)
chr3 (214-322)||(50258622-50258731)
chr3 (223-315)||(36605973-36606065)
chr3 (219-322)||(54574826-54574929)
chr3 (219-321)||(32319155-32319257)
chr3 (183-315)||(48157107-48157229)
chr3 (224-321)||(49393099-49393195)
chr3 (219-322)||(8420330-8420433)
chr3 (219-321)||(25855426-25855527)
chr3 (236-322)||(26279563-26279649)
chr3 (219-321)||(789940-790042)
chr3 (257-322)||(23641317-23641382)
chr3 (246-322)||(42453435-42453511)
chr3 (224-314)||(28689368-28689458)
chr3 (219-322)||(52374660-52374763)
chr3 (20-66)||(13795206-13795252)
chr3 (20-66)||(36605865-36605911)
chr3 (20-66)||(3954853-3954899)
chr3 (20-66)||(47467600-47467646)
chr3 (20-66)||(50258735-50258781)
chr3 (20-66)||(21582687-21582733)
chr3 (20-66)||(42098717-42098763)
chr3 (20-66)||(53149458-53149504)
chr3 (20-64)||(18372051-18372095)
chr3 (20-62)||(1148359-1148401)
chr3 (21-66)||(8074088-8074133)
chr3 (20-48)||(29620618-29620646)
chr3 (20-64)||(48156961-48157005)
[»] chr1 (52 HSPs)
chr1 (20-322)||(44655558-44655856)
chr1 (170-322)||(5316643-5316795)
chr1 (126-322)||(27906727-27906911)
chr1 (170-362)||(50881393-50881585)
chr1 (170-322)||(23185390-23185542)
chr1 (170-321)||(4971617-4971768)
chr1 (170-317)||(9181008-9181155)
chr1 (170-315)||(27559600-27559745)
chr1 (186-322)||(5027528-5027664)
chr1 (169-317)||(9173026-9173174)
chr1 (170-362)||(17168919-17169112)
chr1 (169-320)||(1366878-1367029)
chr1 (201-322)||(14146294-14146415)
chr1 (170-315)||(19955680-19955825)
chr1 (198-313)||(6771782-6771897)
chr1 (198-322)||(3406409-3406533)
chr1 (198-322)||(3440287-3440411)
chr1 (170-314)||(40501796-40501940)
chr1 (198-313)||(16140046-16140161)
chr1 (198-322)||(41697135-41697259)
chr1 (170-362)||(51607397-51607590)
chr1 (170-315)||(13913485-13913632)
chr1 (140-273)||(34246981-34247106)
chr1 (170-322)||(44895615-44895761)
chr1 (230-362)||(6889634-6889766)
chr1 (230-362)||(6891480-6891612)
chr1 (228-322)||(21740935-21741029)
chr1 (219-322)||(45758506-45758609)
chr1 (219-321)||(38547035-38547137)
chr1 (224-322)||(38853539-38853637)
chr1 (219-322)||(39134720-39134824)
chr1 (219-321)||(43235767-43235871)
chr1 (219-321)||(26803960-26804059)
chr1 (219-322)||(33170771-33170874)
chr1 (221-322)||(5533326-5533428)
chr1 (242-322)||(22865459-22865538)
chr1 (259-322)||(17322621-17322684)
chr1 (219-322)||(50146308-50146411)
chr1 (219-321)||(6221690-6221791)
chr1 (20-66)||(14146224-14146270)
chr1 (20-66)||(27906949-27906995)
chr1 (232-322)||(35392295-35392384)
chr1 (20-66)||(3406342-3406388)
chr1 (20-66)||(3440432-3440478)
chr1 (20-66)||(6771715-6771761)
chr1 (20-66)||(6888488-6888534)
chr1 (20-62)||(41697284-41697326)
chr1 (222-322)||(10925951-10926052)
chr1 (20-66)||(16139979-16140025)
chr1 (20-66)||(10912095-10912141)
chr1 (20-59)||(5027982-5028021)
chr1 (20-66)||(23181730-23181776)
[»] chr4 (73 HSPs)
chr4 (20-321)||(38209590-38209888)
chr4 (170-322)||(10978857-10979009)
chr4 (170-322)||(47128944-47129096)
chr4 (126-322)||(55255182-55255366)
chr4 (170-322)||(34768572-34768724)
chr4 (170-312)||(13460164-13460306)
chr4 (174-322)||(48209201-48209349)
chr4 (169-322)||(32128540-32128693)
chr4 (170-315)||(34027536-34027681)
chr4 (170-315)||(10428202-10428355)
chr4 (169-322)||(2790739-2790892)
chr4 (169-322)||(43455529-43455682)
chr4 (170-321)||(35779325-35779475)
chr4 (170-314)||(37777229-37777373)
chr4 (170-322)||(54083240-54083392)
chr4 (207-322)||(54780771-54780886)
chr4 (169-322)||(16844977-16845131)
chr4 (170-322)||(19498461-19498611)
chr4 (198-322)||(32915370-32915494)
chr4 (198-313)||(1105517-1105632)
chr4 (198-313)||(37514644-37514759)
chr4 (170-307)||(40089473-40089609)
chr4 (198-310)||(5128852-5128964)
chr4 (170-272)||(23509846-23509948)
chr4 (170-322)||(16882393-16882545)
chr4 (170-322)||(35465064-35465215)
chr4 (170-315)||(24969394-24969529)
chr4 (170-314)||(38352271-38352405)
chr4 (219-318)||(36118460-36118559)
chr4 (219-322)||(52468292-52468395)
chr4 (225-319)||(36178684-36178778)
chr4 (245-322)||(17679432-17679509)
chr4 (219-318)||(27112036-27112135)
chr4 (219-301)||(4167910-4167992)
chr4 (219-317)||(2135324-2135422)
chr4 (220-322)||(39329390-39329492)
chr4 (241-322)||(51964736-51964820)
chr4 (242-322)||(39655252-39655332)
chr4 (219-322)||(10041998-10042101)
chr4 (219-322)||(24396940-24397043)
chr4 (219-313)||(37744916-37745011)
chr4 (255-322)||(51691913-51691980)
chr4 (240-322)||(16922327-16922409)
chr4 (249-322)||(9578662-9578736)
chr4 (227-322)||(36362869-36362964)
chr4 (20-66)||(1105450-1105496)
chr4 (20-66)||(10431443-10431489)
chr4 (219-317)||(45656181-45656279)
chr4 (20-66)||(55255099-55255145)
chr4 (219-308)||(40217238-40217327)
chr4 (20-66)||(5128984-5129030)
chr4 (20-62)||(9579474-9579516)
chr4 (20-62)||(9585169-9585211)
chr4 (20-66)||(17679236-17679282)
chr4 (20-66)||(45560705-45560751)
chr4 (20-66)||(47128000-47128046)
chr4 (20-66)||(48208469-48208515)
chr4 (267-315)||(23508515-23508564)
chr4 (220-319)||(15735102-15735196)
chr4 (278-321)||(24614018-24614061)
chr4 (20-66)||(13459803-13459849)
chr4 (280-322)||(30507120-30507162)
chr4 (20-66)||(34769534-34769580)
chr4 (20-66)||(37514577-37514623)
chr4 (174-226)||(9578733-9578782)
chr4 (20-66)||(27596640-27596686)
chr4 (19-60)||(54779459-54779500)
chr4 (20-55)||(32915316-32915351)
chr4 (257-307)||(29425187-29425237)
chr4 (20-66)||(35780557-35780603)
chr4 (37-66)||(23510888-23510917)
chr4 (93-138)||(30083360-30083405)
chr4 (171-215)||(2135447-2135491)
[»] chr5 (53 HSPs)
chr5 (20-322)||(34756362-34756661)
chr5 (170-322)||(16592070-16592222)
chr5 (170-322)||(30854282-30854433)
chr5 (169-322)||(38869359-38869512)
chr5 (170-322)||(27078963-27079115)
chr5 (170-315)||(16198797-16198942)
chr5 (169-322)||(28822338-28822491)
chr5 (169-315)||(9364242-9364388)
chr5 (198-313)||(15480094-15480209)
chr5 (198-312)||(19523179-19523293)
chr5 (169-314)||(16799331-16799476)
chr5 (170-315)||(40389539-40389684)
chr5 (198-322)||(2274870-2274994)
chr5 (201-322)||(36187875-36187996)
chr5 (170-315)||(7670876-7671022)
chr5 (169-308)||(27924033-27924172)
chr5 (216-322)||(23284058-23284164)
chr5 (171-322)||(22986554-22986694)
chr5 (223-322)||(31194608-31194706)
chr5 (221-322)||(36868872-36868973)
chr5 (219-321)||(14318382-14318484)
chr5 (240-321)||(7338021-7338102)
chr5 (223-322)||(31881430-31881528)
chr5 (219-322)||(1366522-1366625)
chr5 (219-314)||(2530901-2530996)
chr5 (222-321)||(26718946-26719045)
chr5 (222-321)||(26988690-26988789)
chr5 (219-322)||(33037781-33037884)
chr5 (219-321)||(2412089-2412191)
chr5 (222-322)||(2024638-2024738)
chr5 (219-322)||(34425904-34426007)
chr5 (221-322)||(10407464-10407565)
chr5 (230-320)||(22648734-22648824)
chr5 (220-314)||(24395741-24395835)
chr5 (219-321)||(41911614-41911716)
chr5 (219-322)||(11242314-11242417)
chr5 (227-321)||(10543682-10543776)
chr5 (219-322)||(40794323-40794426)
chr5 (20-66)||(15480230-15480276)
chr5 (20-66)||(19523112-19523158)
chr5 (273-322)||(606209-606258)
chr5 (219-321)||(15639644-15639749)
chr5 (231-322)||(17344969-17345060)
chr5 (20-66)||(31881591-31881637)
chr5 (20-66)||(36188020-36188066)
chr5 (20-64)||(22987470-22987514)
chr5 (20-66)||(30853285-30853331)
chr5 (278-322)||(27530543-27530587)
chr5 (20-66)||(2274817-2274863)
chr5 (20-66)||(16592846-16592892)
chr5 (20-66)||(31194768-31194814)
chr5 (282-322)||(35080766-35080806)
chr5 (279-317)||(22875003-22875041)
[»] chr2 (48 HSPs)
chr2 (20-322)||(3155022-3155320)
chr2 (20-322)||(4505698-4505997)
chr2 (20-322)||(6964811-6965110)
chr2 (20-314)||(8907086-8907376)
chr2 (126-322)||(12337447-12337643)
chr2 (170-322)||(29939861-29940013)
chr2 (169-322)||(9045979-9046133)
chr2 (181-317)||(24410398-24410535)
chr2 (198-362)||(3952985-3953149)
chr2 (170-321)||(10762565-10762716)
chr2 (180-322)||(26716089-26716232)
chr2 (198-322)||(7162763-7162887)
chr2 (170-315)||(27506746-27506891)
chr2 (219-322)||(16097008-16097111)
chr2 (219-320)||(38400798-38400899)
chr2 (245-322)||(40636164-40636241)
chr2 (235-322)||(34693991-34694078)
chr2 (235-322)||(34716403-34716490)
chr2 (221-322)||(24035544-24035645)
chr2 (219-322)||(21665699-21665802)
chr2 (219-322)||(28425709-28425812)
chr2 (219-322)||(7742132-7742236)
chr2 (219-322)||(13800543-13800647)
chr2 (219-322)||(12134039-12134142)
chr2 (219-321)||(16227368-16227470)
chr2 (245-322)||(5952716-5952791)
chr2 (219-288)||(37182670-37182739)
chr2 (242-321)||(42029168-42029247)
chr2 (20-66)||(3952918-3952964)
chr2 (219-321)||(11912757-11912859)
chr2 (20-66)||(7162696-7162742)
chr2 (20-66)||(12337690-12337736)
chr2 (20-66)||(34693166-34693212)
chr2 (20-66)||(34715578-34715624)
chr2 (265-321)||(11952588-11952643)
chr2 (225-293)||(22727530-22727598)
chr2 (170-224)||(8327617-8327671)
chr2 (271-321)||(10252468-10252518)
chr2 (20-62)||(40635981-40636023)
chr2 (281-322)||(22727456-22727497)
chr2 (20-64)||(3399528-3399572)
chr2 (20-66)||(41213929-41213975)
chr2 (275-315)||(8327674-8327714)
chr2 (80-116)||(12337633-12337669)
chr2 (290-322)||(1396698-1396730)
chr2 (20-48)||(5952949-5952977)
chr2 (219-283)||(11952644-11952708)
chr2 (292-361)||(44914863-44914932)
[»] chr7 (42 HSPs)
chr7 (20-322)||(18776764-18777065)
chr7 (170-322)||(8171537-8171689)
chr7 (170-322)||(29077172-29077324)
chr7 (170-322)||(20091279-20091431)
chr7 (170-317)||(24525688-24525835)
chr7 (170-322)||(48983842-48983994)
chr7 (171-315)||(23551075-23551220)
chr7 (169-322)||(38414874-38415027)
chr7 (198-322)||(10955464-10955588)
chr7 (198-313)||(12596294-12596409)
chr7 (169-315)||(47984974-47985121)
chr7 (169-322)||(19692045-19692198)
chr7 (180-315)||(10329415-10329550)
chr7 (140-273)||(40357413-40357538)
chr7 (170-314)||(8239637-8239783)
chr7 (219-322)||(2611260-2611363)
chr7 (170-264)||(25010385-25010479)
chr7 (222-321)||(9021799-9021898)
chr7 (230-321)||(6765680-6765771)
chr7 (223-322)||(28749715-28749813)
chr7 (219-322)||(36891579-36891682)
chr7 (240-322)||(26254015-26254097)
chr7 (219-322)||(7398452-7398555)
chr7 (222-319)||(23859077-23859174)
chr7 (241-321)||(33162338-33162418)
chr7 (219-322)||(27237421-27237524)
chr7 (222-320)||(36902924-36903022)
chr7 (230-322)||(23744808-23744900)
chr7 (219-322)||(12981327-12981430)
chr7 (223-314)||(20153206-20153297)
chr7 (235-321)||(21763586-21763672)
chr7 (220-322)||(23020482-23020583)
chr7 (20-66)||(28749600-28749646)
chr7 (219-322)||(12419493-12419596)
chr7 (20-66)||(12596430-12596476)
chr7 (220-298)||(38971255-38971333)
chr7 (265-321)||(9014177-9014233)
chr7 (219-318)||(18201138-18201237)
chr7 (219-307)||(9014782-9014863)
chr7 (20-66)||(10955397-10955443)
chr7 (221-284)||(17800257-17800320)
chr7 (20-66)||(29076949-29076997)
[»] scaffold0070 (2 HSPs)
scaffold0070 (170-322)||(1295-1447)
scaffold0070 (20-66)||(1030-1076)
[»] scaffold0039 (1 HSPs)
scaffold0039 (169-322)||(106489-106642)
[»] scaffold1590 (1 HSPs)
scaffold1590 (219-322)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (219-321)||(206489-206591)
[»] scaffold0097 (1 HSPs)
scaffold0097 (219-317)||(38926-39024)
[»] scaffold0182 (1 HSPs)
scaffold0182 (221-321)||(23993-24093)
[»] scaffold0018 (1 HSPs)
scaffold0018 (219-316)||(173515-173612)
[»] scaffold0007 (1 HSPs)
scaffold0007 (220-322)||(230858-230960)
[»] scaffold0001 (2 HSPs)
scaffold0001 (198-268)||(181899-181969)
scaffold0001 (264-313)||(183106-183155)
[»] scaffold1320 (1 HSPs)
scaffold1320 (219-322)||(1355-1458)
[»] scaffold0022 (2 HSPs)
scaffold0022 (219-322)||(40086-40191)
scaffold0022 (219-322)||(138146-138251)
[»] scaffold0003 (1 HSPs)
scaffold0003 (242-295)||(351360-351413)
[»] scaffold0227 (2 HSPs)
scaffold0227 (219-286)||(16028-16095)
scaffold0227 (276-314)||(16123-16161)
[»] scaffold0229 (1 HSPs)
scaffold0229 (214-311)||(23879-23976)


Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 30883129 - 30883433
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnn--atatccagtataatggtggtttctttttaggccccctt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||    
T  30883129 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttattttttttatatccagtataatggtggtttctttttaggccccctt 30883228  T
Q  118 agtatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgg 217  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30883229 aatatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgg 30883328  T
Q  218 gggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  30883329 gggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgct 30883428  T
Q  318 ctttt 322  Q
    |||||    
T  30883429 ctttt 30883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 2952519 - 2952220
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  2952519 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtggtttctttttaggcccccttaa 2952424  T
Q  120 tatctcttaggccccc-taagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtggg 218  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2952423 tatctcttaggcccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtggg 2952324  T
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctc 2952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 321
Target Start/End: Complemental strand, 5861042 - 5860744
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  5861042 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttttt---atatccagtataatggtggtttctttttaggcccccttaa 5860946  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5860945 tatctcttagatcccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggttggg 5860846  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  5860845 gtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 5860746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 3048820 - 3048516
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnn--atatccagtataatggtggtttctttttaggccccctt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||    
T  3048820 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttatttattttatatccagtataatggtggtttctttttaggccccctt 3048721  T
Q  118 agtatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgg 217  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3048720 aatatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtga 3048621  T
Q  218 gggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |    
T  3048620 gggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagtatattgct 3048521  T
Q  318 ctttt 322  Q
    |||||    
T  3048520 ctttt 3048516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 170 - 362
Target Start/End: Original strand, 41879133 - 41879325
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||||||    
T  41879133 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatata 41879232  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| |||| |||||||    
T  41879233 tacggtaccttgtatttatcttttaaaaaatataaatagaacattgttcttttaaaaaaatacgttttaattttatcactaacctcttttcat 41879325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 13534837 - 13534686
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13534837 cttttaggattattagaattagtttctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 13534738  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  13534737 tacggca-cttgtatttatcttttaaaaaatataaatagaacattgctctttt 13534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 13624377 - 13624226
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13624377 cttttaggattattagaattagtttctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 13624278  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  13624277 tacggca-cttgtatttatcttttaaaaaatataaatagaacattgctctttt 13624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 45475769 - 45475921
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45475769 cttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatata 45475868  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45475869 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 45475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 23606781 - 23606628
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  23606781 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatat 23606682  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  23606681 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 23606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 169 - 321
Target Start/End: Complemental strand, 23798413 - 23798261
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23798413 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatat 23798314  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  23798313 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 10917343 - 10917495
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10917343 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatata 10917442  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  10917443 tacggcaccttatatttatcttttaaaaaatataaatagatcattgttttttt 10917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 42600734 - 42600879
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  42600734 cttttaggcctattagaattaggtcttcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatata 42600833  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||    
T  42600834 tacggcaccttatatttatcttttaaaaaatataaatagatcattg 42600879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 37430281 - 37430157
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  37430281 ttgattttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaa 37430182  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  37430181 aatataaatagaacatcgctctttt 37430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 5973209 - 5973106
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||| ||||||||||| | ||||||| || |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 5973110  T
Q  319 tttt 322  Q
    ||||    
T  5973109 tttt 5973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 7944624 - 7944521
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||| |||||||||  |||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttc 7944525  T
Q  319 tttt 322  Q
    ||||    
T  7944524 tttt 7944521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 11290185 - 11290288
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||| ||||||||||||||||| |||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttc 11290284  T
Q  319 tttt 322  Q
    ||||    
T  11290285 tttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 39332507 - 39332405
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||| |||||| ||||||||||||||||||||| |||||  |||||||||||||||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattgttc 39332408  T
Q  319 ttt 321  Q
    |||    
T  39332407 ttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 15167517 - 15167414
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttc 15167418  T
Q  319 tttt 322  Q
    ||||    
T  15167417 tttt 15167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 299  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 41677276 - 41677172
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaa-aaaatataaatagaacattgtt 317  Q
    |||||||||||||||| ||||| |||||||||| | | |||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgtt 41677177  T
Q  318 ctttt 322  Q
    |||||    
T  41677176 ctttt 41677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 8102913 - 8103008
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||||||||| | |||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 34789959 - 34789861
Alignment:
Q  224 ctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||| |||||||||| |||||||||  ||||||||||||| |||||||||||||||||| | || |||||||||||| ||||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttctttt 34789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 8646215 - 8646309
Alignment:
Q  227 atgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||| |||||||| | || |||||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 15078759 - 15078862
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||||| |||| |||||||| | ||||||||  ||||||||||  |||||| ||||||||||||||||| | ||||||||||||| |||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacattattc 15078858  T
Q  319 tttt 322  Q
    ||||    
T  15078859 tttt 15078862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 30674482 - 30674403
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||| || ||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttcttt 30674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacat 313  Q
    ||||||||| |||||||||||| |||||||| | |||||||||||  |||||| | |||||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 14510084 - 14509983
Alignment:
Q  219 ggttcctcatgtatacggtagtcatttt-cacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||| ||||||||||||||||| ||||| ||| | |||||||||||  ||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacattgtt 14509987  T
Q  318 cttt 321  Q
    ||||    
T  14509986 cttt 14509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 320
Target Start/End: Complemental strand, 25561595 - 25561496
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||| ||| |||||||| | ||||| || |||||||||||| ||||||||||||||| ||||||| || ||||||||||||| |||    
T  25561595 ggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacattattc 25561498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 23941170 - 23941095
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    ||||||| || |||||||| ||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacattgtt 23941095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 20003923 - 20003877
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20003923 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 20003877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 34048806 - 34048705
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtacc--gcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||| ||||| ||||||| || |||||||| |    ||||||||||||| |||||||||||||||||||  | ||||||||||||||||||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttct 34048707  T
Q  320 tt 321  Q
    ||    
T  34048706 tt 34048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 9108551 - 9108596
Alignment:
Q  276 accttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 34868223 - 34868177
Alignment:
Q  275 caccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacattattcttt 34868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 38009203 - 38009151
Alignment:
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||| || ||||||||||||||||| | |||||||||||||||||||||    
T  38009203 tacgacacgttatatttatcttttaaaaattttaaatagaacattgttctttt 38009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 37430348 - 37430302
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  37430348 gtgcaaacagctcaaacgagttgggccttccttaaggatgggcctca 37430302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 41878184 - 41878230
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||    
T  41878184 gtgcaaacagctcaaacgagttgagcctccctcaaggatgagcctca 41878230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 45472210 - 45472256
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  45472210 gtgcaaacagctcaaccgagctgggccacccccaaggatgggcctca 45472256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 5757117 - 5757153
Alignment:
Q  255 ggtgtaccgcatatatacgacaccttgtatttatctt 291  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  5757117 ggtgttccgcatatatacggcaccttgtatttatctt 5757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 21479303 - 21479601
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||             ||||||||||||||||||| |||||||||||||||||||     
T  21479303 gtgcaaacagctaaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtggattctttttaggcccccttaa 21479398  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479399 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 21479498  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  21479499 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 21479598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 21280352 - 21280652
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||             |||||||||||||||||||||||||||||||||||||||     
T  21280352 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcattttttttttt--atatccagtataatggtggtttctttttaggcccccttaa 21280449  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21280450 tatctcttagaccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtggga 21280549  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  21280550 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 21280649  T
Q  320 ttt 322  Q
    |||    
T  21280650 ttt 21280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 13727696 - 13727398
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||             ||| |||||||||||||||||||||||||||||||||||     
T  13727696 gtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctcatttttttttt---ata-ccagtataatggtggtttctttttaggcccccttaa 13727601  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13727600 tatctcttaggccccctaagattatttcattccctcaaaaggatgagcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 13727501  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  13727500 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 13727401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 80 - 314
Target Start/End: Original strand, 33773982 - 33774216
Alignment:
Q  80 atatccagtataatggtggtttctttttaggcccccttagtatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggat 179  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33773982 atatccagtataatggtggtttctttttaggtccctttaatatctcttaggccccctaagattatttcattccctcacaaggatgggtctcttttaggat 33774081  T
Q  180 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacacct 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  33774082 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcacct 33774181  T
Q  280 tgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||||||||||||||||||||||||    
T  33774182 tgtatttatcttttaaaaaatataaatagaacatt 33774216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 19737843 - 19737691
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19737843 cttttaggattattaaaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatata 19737744  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  19737743 tacggcaccttgtatttatctttaaaaaaatataaatagaacattgctctttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 169 - 362
Target Start/End: Complemental strand, 27788840 - 27788647
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  ||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27788840 tcttttaggcctattaaaattaggtcatcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 27788741  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    ||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||       ||| |||| |||||||||||| ||| |||||||    
T  27788740 atacggcaccttatatttatcttttaaaaaatataaatagaaaattgctcttttaaaaaaatacgttttgattttatcactggcctcttttcat 27788647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 180 - 315
Target Start/End: Original strand, 28075748 - 28075883
Alignment:
Q  180 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacacct 279  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  28075748 tattagaattaggtcctcttgtttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcacct 28075847  T
Q  280 tgtatttatcttttaaaaaatataaatagaacattg 315  Q
    | ||||||||||||||||||||||||||||||||||    
T  28075848 tatatttatcttttaaaaaatataaatagaacattg 28075883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 17353909 - 17354054
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||    
T  17353909 cttttaggtctattagaattaggtcctcttgcttttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatata 17354008  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17354009 tacgacaccttatatttatcttttaaaaaatataaatagaacattg 17354054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 20711872 - 20711719
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| || ||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20711872 tcttttaggcctattagaattaggtcatcttgcttttaatgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 20711773  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  20711772 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 20711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 24711122 - 24711007
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  24711122 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaa 24711023  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  24711022 aatataaatagaacat 24711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 34397812 - 34397964
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| ||||||||||| |||| |||||||||||| |||| |||||||||| |||| | |||||||||||||||    
T  34397812 cttttaggcctattagaattaggtcttcttgcttttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatata 34397911  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34397912 tacgtcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 30832647 - 30832532
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||    
T  30832647 ttgattttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaa 30832548  T
Q  298 aatataaatagaacat 313  Q
    ||| ||||||||||||    
T  30832547 aatgtaaatagaacat 30832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 1155947 - 1155849
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 235377 - 235230
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||| | ||||    
T  235377 tcttttaggcctattagaattaggtcctcttgcttttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatat 235279  T
Q  269 ata--cgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    |||  || |||||| |||||||||||||||||||||||||||| |||||    
T  235278 atacccggcaccttatatttatcttttaaaaaatataaatagatcattg 235230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 6159442 - 6159541
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||| || ||||||||||| |||| ||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattgttc 6159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 2477686 - 2477587
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||| | | |||||| |||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc 2477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 27314259 - 27314177
Alignment:
Q  241 cattttcacctctgggtgtaccgcatatatacgacaccttgtatttatc-ttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctttt 27314177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||||||||||| |||||||||| ||| |||  || ||||||||||||||||||||||||| |||||||||| ||| |||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaa 310  Q
    |||||||||||||||||||||| ||||||| || |||||||||| ||||||||||  || |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 30121783 - 30121868
Alignment:
Q  236 gtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||| |||||||||| ||| |||| |||||||||| |||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 23070936 - 23070890
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23070936 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 23070890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 19987116 - 19987209
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccg 263  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||||| ||||| ||||||| ||||  ||||||||| | |||||||||||    
T  19987116 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtggggattccttatgtatatggtaaccattttcacatttgggtgtaccg 19987209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 4036953 - 4037031
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaa 298  Q
    ||||||||| ||||||||||| || || |||| ||||||||||  ||||||||| |||||||||||||||| |||||||    
T  4036953 gttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 12083687 - 12083641
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12083687 gtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctca 12083641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 19741270 - 19741224
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  19741270 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctca 19741224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 30832714 - 30832668
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  30832714 gtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctca 30832668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 24711189 - 24711143
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  24711189 gtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctca 24711143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 27314811 - 27314773
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggat 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27314811 gtgcaaacagctcaaacgagctgggcctccctcaaggat 27314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 1156064 - 1156018
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||    
T  1156064 gtgcaaacagctcaaacgagctaggtctcccttaaggatgggcctca 1156018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 27579122 - 27579084
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggat 58  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  27579122 gtgcaaccagctcaaacgagctgggcctccctcaaggat 27579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 33773919 - 33773964
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33773919 gtgcaaaca-ctcaaatgagctgggcctccctcaaggatgggcctca 33773964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 27994775 - 27994819
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgca 265  Q
    |||||||||||||||||||| |||||||||| || ||||||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtaccgca 27994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 19986985 - 19987031
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||    
T  19986985 gtgcaaacagctcaacagagctgggcctccctcaattatgggcctca 19987031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 54619500 - 54619202
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||| ||||||||||||||||     
T  54619500 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtggtttatttttaggcccccttaa 54619405  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619404 tatctcttaggccccctaagattatttcattccctcacaaggatgggtctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 54619305  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  54619304 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 54619205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 27078865 - 27078575
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  27078865 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttt-----atatccagtataatggtggtttctttttaggcccccttaa 27078771  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  27078770 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcatcttgattttggtgttaggtaggg 27078671  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27078670 gtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattg 27078575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 27084662 - 27084372
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  27084662 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttt-----atatccagtataatggtggtttctttttaggcccccttaa 27084568  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  27084567 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcatcttgattttggtgttaggtaggg 27084468  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27084467 gtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattg 27084372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 38681394 - 38681092
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||||||     
T  38681394 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttttatatccatccagtataatggtggtttctttttaggcccccttaa 38681295  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38681294 tatctcttaggccccctaagattatttcattccctcacaaggattggtctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 38681195  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  38681194 tttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 38681095  T
Q  320 ttt 322  Q
    |||    
T  38681094 ttt 38681092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 36716322 - 36716024
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  36716322 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtggtttctttttaggcccccttaa 36716227  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36716226 tatctcttagactccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 36716127  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    || ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  36716126 gtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 36716027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 170 - 362
Target Start/End: Complemental strand, 3954047 - 3953854
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  3954047 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatata 3953948  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt-nnnnnnntacattttaattttatcactgacctattttcat 362  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||| |||||||    
T  3953947 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgttcttttaaaaaaaatacattttaattttatcactggcctcttttcat 3953854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 18372434 - 18372590
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtac----cgca 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    ||||    
T  18372434 cttttaggattattagaattagttcctcttgattttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgca 18372533  T
Q  266 tatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18372534 tatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 18372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 142 - 286
Target Start/End: Complemental strand, 29620567 - 29620423
Alignment:
Q  142 tatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtc 241  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29620567 tatttcattccctcacaaggatgtgcctcttttaggattattaaaattagttcctcttgattgtggtgttaggtgggggttcctcatgtatacggtagtc 29620468  T
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtattt 286  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||    
T  29620467 attttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 21582754 - 21582878
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21582754 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 21582853  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||| ||||||||||||||    
T  21582854 aatataaataaaacattgttctttt 21582878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 34290787 - 34290635
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34290787 cttttaggcctattagaattaggtcctcttgtttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatata 34290688  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  34290687 tacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttt 34290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 53507035 - 53506883
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  53507035 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatata 53506936  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||  ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  53506935 tacggtaccttatatttatcttttaaaaaatataaatagaacattgttttttt 53506883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 43207389 - 43207237
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  43207389 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacct-ttgatgtaccgcatat 43207291  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  43207290 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 43207237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 8073488 - 8073345
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  8073488 cttttaggcctattagaattagttcctattgcttttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatata 8073390  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8073389 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 8073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 170 - 314
Target Start/End: Original strand, 44708432 - 44708576
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44708432 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatata 44708531  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||| |||||| |||||||||||||||||||||||||||||||||    
T  44708532 tacggcaccttatatttatcttttaaaaaatataaatagaacatt 44708576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 47467667 - 47467782
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  47467667 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaa 47467766  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  47467767 aatataaatagaacat 47467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 54407308 - 54407157
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||    
T  54407308 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatata 54407210  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  54407209 tacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttt 54407157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 37168322 - 37168474
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||| |||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  37168322 cttttaggcctattataattaggtcctcttgcttttagtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatata 37168421  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  37168422 tacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttt 37168474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 53149437 - 53149313
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  53149437 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaa 53149338  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  53149337 aatataaatagaacatcgctctttt 53149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 9878839 - 9878686
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||| ||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  9878839 tcttttaggcctattagaattaggtcctcttgcttttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatat 9878740  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||  |||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  9878739 atactgcaccttatatttatcttttaaaaaatataaatagaatattgctctttt 9878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 42098784 - 42098908
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  42098784 ttgattttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaa 42098883  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  42098884 aatataaatagaacatcgctctttt 42098908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 50939385 - 50939239
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||  ||||    
T  50939385 tcttttaggcctattagaattaggtccttttgcttttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatat 50939286  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||    
T  50939285 atacggcaccttatatttatcttttaaaaaatataaatagatcattg 50939239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 50258731 - 50258622
Alignment:
Q  214 gtgggggttcctcatgtatacggtagtcattttcacc-tctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaaca 312  Q
    |||||||||||||||| ||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  313 ttgttctttt 322  Q
    | | ||||||    
T  50258631 tcgctctttt 50258622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 36605973 - 36606065
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatc-ttttaaaaaatataaatagaacattg 315  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattg 36606065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 54574929 - 54574826
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| |||||| ||||| || | |||||||||||||||||||||  ||||||||||||| |||| |||||| |||||||||||||||||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttc 54574830  T
Q  319 tttt 322  Q
    ||||    
T  54574829 tttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 32319257 - 32319155
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||| | |||| | |||| |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||| |||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacattattc 32319158  T
Q  319 ttt 321  Q
    |||    
T  32319157 ttt 32319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 315
Target Start/End: Original strand, 48157107 - 48157229
Alignment:
Q  183 tagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgt 282  Q
    ||||||||  |||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||          |||||| |    
T  48157107 tagaattacgtcctcttgcttttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttat 48157196  T
Q  283 atttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||||||||||||||||||| |||||    
T  48157197 atttatcttttaaaaaatataaatagatcattg 48157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 49393099 - 49393195
Alignment:
Q  224 ctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||| ||||| |||| |||||||||  |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 8420330 - 8420433
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||| | ||||||| ||| |||||||| | |||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattattc 8420429  T
Q  319 tttt 322  Q
    ||||    
T  8420430 tttt 8420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 25855426 - 25855527
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||| || ||||||||||||| ||||||| || |||||| ||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  25855426 ggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgta-ttatcttttaaaaaatttaaatagaacattgttc 25855524  T
Q  319 ttt 321  Q
    |||    
T  25855525 ttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 26279563 - 26279649
Alignment:
Q  236 gtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| ||||||| || ||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 789940 - 790042
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| ||| || ||||| |||| |||||||||  |||||||| ||||||||||||||||  |||||||||| ||||||||| |||||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattgttc 790039  T
Q  319 ttt 321  Q
    |||    
T  790040 ttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 23641382 - 23641317
Alignment:
Q  257 tgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaatgttgttctttt 23641317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 42453435 - 42453511
Alignment:
Q  246 tcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||| | |||||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 28689458 - 28689368
Alignment:
Q  224 ctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||||||||||||| ||| |||||||||| ||| | || |||||||||||| |||||||||||||||||||  ||||| |||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 52374660 - 52374763
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||| |||||||||||||||| |||||| ||| | | |||| ||||| |||||||||| |||||||||| |   ||||||| |||||||||||||||||    
T  52374660 ggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattgttc 52374759  T
Q  319 tttt 322  Q
    ||||    
T  52374760 tttt 52374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 13795206 - 13795252
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13795206 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 13795252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 36605865 - 36605911
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36605865 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36605911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 3954899 - 3954853
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3954899 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctca 3954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 47467600 - 47467646
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  47467600 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctca 47467646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 50258781 - 50258735
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  50258781 gtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctca 50258735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 21582687 - 21582733
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21582687 gtgcaaacagctcaaacgagctgggcatcccttaaggatgggcctca 21582733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 42098717 - 42098763
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  42098717 gtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctca 42098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 53149504 - 53149458
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  53149504 gtgcaaacagctcaaacgagctgggcctccaccaaggatgggcctca 53149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18372051 - 18372095
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 64  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  18372051 gtgcaaacagttcaaacgagctggggctccctcaaggatgggcct 18372095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 1148401 - 1148359
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 62  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  1148401 gtgcgaacagctcaaacgagctgggcctcccccaaggatgggc 1148359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 8074133 - 8074088
Alignment:
Q  21 tgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||| ||||| ||||||||||||||  |||||||||||||||    
T  8074133 tgcaaacaactcaatcgagctgggcctcctccaaggatgggcctca 8074088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 29620646 - 29620618
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctc 48  Q
    |||||||||||||||||||||||||||||    
T  29620646 gtgcaaacagctcaaacgagctgggcctc 29620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 48156961 - 48157005
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 64  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||    
T  48156961 gtgcaaacagctcaacagagctgggcctccctcaatcatgggcct 48157005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 44655558 - 44655856
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||| ||||||||||||||||||||     
T  44655558 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtgatttctttttaggcccccttaa 44655653  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44655654 tatctcttaggccccctaagattatttcattccctcacaaggatgtgcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 44655753  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44655754 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctct 44655853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 5316643 - 5316795
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5316643 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 5316742  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5316743 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 5316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 126 - 322
Target Start/End: Complemental strand, 27906911 - 27906727
Alignment:
Q  126 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27906911 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 27906812  T
Q  226 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||||||             || |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  27906811 catgtatacggtagtcattttcacctctgggtg------------gcggcaccttgtatttatcttttaaaaaatataaatggaacattgctctttt 27906727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 170 - 362
Target Start/End: Original strand, 50881393 - 50881585
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  50881393 cttttaggattattagaattagttcctcttaattttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatata 50881492  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||       || |||||||||||||||||| ||| |||||||    
T  50881493 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaatagattttaattttatcactggcctcttttcat 50881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 23185390 - 23185542
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23185390 cttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatata 23185489  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23185490 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 23185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 4971768 - 4971617
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  4971768 cttttaggcctattagaattagttcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatata 4971669  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  4971668 tacggtaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 9181155 - 9181008
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  9181155 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatata 9181056  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  9181055 tacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9181008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 27559600 - 27559745
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27559600 cttttaggcctattagaattaggtcctcttacttatggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatata 27559699  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  27559700 tacgacaccttatatttatcttttaaaaaatataaatagaacattg 27559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 186 - 322
Target Start/End: Original strand, 5027528 - 5027664
Alignment:
Q  186 aattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatt 285  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  5027528 aattagttcctcttgcttttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatt 5027627  T
Q  286 tatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5027628 tatcttttaaaaaatataaatagaacattgctctttt 5027664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 9173174 - 9173026
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  9173174 tcttttaggcctattagaattaggtcctcttacttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatat 9173075  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  9173074 atacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 9173026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 170 - 362
Target Start/End: Original strand, 17168919 - 17169112
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  17168919 cttttaggcctattagaattaggtcttcttgcttttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatata 17169018  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg-ttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| || ||||       ||| |||| |||||||||||||||| |||||||    
T  17169019 tacaacaccttatatttatcttttaaaaaatataaatagaacattgctttttttaaaaaaatacgttttgattttatcactgacctcttttcat 17169112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 1367029 - 1366878
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  1367029 tcttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatat 1366930  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  1366929 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctt 1366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 322
Target Start/End: Original strand, 14146294 - 14146415
Alignment:
Q  201 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14146294 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaat 14146393  T
Q  301 ataaatagaacattgttctttt 322  Q
    ||||||||||||| | ||||||    
T  14146394 ataaatagaacatcgctctttt 14146415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 19955680 - 19955825
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  19955680 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatata 19955779  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||  ||||| |||||||||||||||||||||||||||| |||||    
T  19955780 tacggtaccttatatttatcttttaaaaaatataaatagatcattg 19955825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 6771782 - 6771897
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6771782 ttgattttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 6771881  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  6771882 aatataaatagaacat 6771897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 3406409 - 3406533
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||    
T  3406409 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaa 3406508  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  3406509 aatataaatagaacatcgctctttt 3406533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 3440411 - 3440287
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||    
T  3440411 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaa 3440312  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  3440311 aatataaatagaacatcgctctttt 3440287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 40501940 - 40501796
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  40501940 cttttaggtctattagaattagatcatcttgcttttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatata 40501841  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  40501840 tacgacaccttatatttatcttttaaaaaatataaatagatcatt 40501796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 16140046 - 16140161
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16140046 ttgattttagtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaa 16140145  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  16140146 aatataaatagaacat 16140161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 41697259 - 41697135
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || |||||||||||||||||||    
T  41697259 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaa 41697160  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  41697159 aatataaatagaacatcgctctttt 41697135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 170 - 362
Target Start/End: Complemental strand, 51607590 - 51607397
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||  |||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  51607590 cttttaggcctattagaattatgtcctcttgcttttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatata 51607491  T
Q  270 tac-gacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    ||| | |||||| |||||||||||||||||||||||||| |||||| || ||||       ||| |||| |||||||||||||||| |||||||    
T  51607490 tacggccaccttatatttatcttttaaaaaatataaataaaacattttttttttaaaaaaatacgttttgattttatcactgacctcttttcat 51607397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 13913632 - 13913485
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | | |||||||||||||||    
T  13913632 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatata 13913533  T
Q  270 ta--cgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||  || || ||| |||||||||||||||||||||||||||| |||||    
T  13913532 tacccggcaacttatatttatcttttaaaaaatataaatagatcattg 13913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 34246981 - 34247106
Alignment:
Q  140 attatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtag 239  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||||||    
T  34246981 attattttattccctcacaaggatgggtctcttttaggattattagaattagttcatcttgattttggtgttaggtgggggttcc--------acggtag 34247072  T
Q  240 tcattttcacctctgggtgtaccgcatatatacg 273  Q
    ||||||||| |||| |||||||||||||||||||    
T  34247073 tcattttcatctcttggtgtaccgcatatatacg 34247106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 44895615 - 44895761
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||      |    
T  44895615 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------a 44895708  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
      || |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  44895709 cccgccaccttatatttatcttttaaaaaatataaatagatcattgttttttt 44895761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 362
Target Start/End: Original strand, 6889634 - 6889766
Alignment:
Q  230 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnn 329  Q
    ||||||| | |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||           
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6889733  T
Q  330 tacattttaattttatcactgacctattttcat 362  Q
    ||| |||| |||||||||||||||| |||||||    
T  6889734 tacgttttgattttatcactgacctcttttcat 6889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 230 - 362
Target Start/End: Original strand, 6891480 - 6891612
Alignment:
Q  230 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttttnnnnnnn 329  Q
    ||||||| | |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||           
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6891579  T
Q  330 tacattttaattttatcactgacctattttcat 362  Q
    ||| |||| |||||||||||||||| |||||||    
T  6891580 tacgttttgattttatcactgacctcttttcat 6891612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 21741029 - 21740935
Alignment:
Q  228 tgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctctttt 21740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 45758506 - 45758609
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||| ||| ||||   ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattgttc 45758605  T
Q  319 tttt 322  Q
    ||||    
T  45758606 tttt 45758609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 38547137 - 38547035
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| | |||| |||||||| | |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatc 38547038  T
Q  319 ttt 321  Q
    |||    
T  38547037 ttt 38547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 38853539 - 38853637
Alignment:
Q  224 ctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||| |||||||||| ||| | |||  |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaacactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 39134824 - 39134720
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatc-ttttaaaaaatataaatagaacattgtt 317  Q
    |||||||||||||||| ||||| ||| |||||| ||||||||  ||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattgtt 39134725  T
Q  318 ctttt 322  Q
    |||||    
T  39134724 ctttt 39134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 43235871 - 43235767
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttt--taaaaaatataaatagaacattgt 316  Q
    ||||||||||||||||| |||| |||||||||| |||||||||  ||||||||||||| |||||||||||||||   ||||||| ||||||||||||| |    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatttt 43235772  T
Q  317 tcttt 321  Q
    |||||    
T  43235771 tcttt 43235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 26803960 - 26804059
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||| ||||||||||||||||| ||||||||||    ||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||    
T  26803960 ggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcattgttc 26804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 33170771 - 33170874
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||| ||||||||||||||||| |||||||||  | |||||||||||||||||| |||| |||||||||  ||||||||||| |||||| |||||||||     
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattgttt 33170870  T
Q  319 tttt 322  Q
    ||||    
T  33170871 tttt 33170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 5533326 - 5533428
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatctttt-aaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||| |||||||||| ||  |||||  |||||||||| |||||||| |||||||||| ||||||| ||||||||| ||||||||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttct 5533425  T
Q  320 ttt 322  Q
    |||    
T  5533426 ttt 5533428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 22865538 - 22865459
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||| ||||||||||| |||||||   || |||||||||||||||||||||||||||||||||||||| ||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 22865459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 17322684 - 17322621
Alignment:
Q  259 taccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 50146308 - 50146411
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| |||| | ||||| |||| ||||| || | |||||| ||| ||||||| |||||||||| ||||| | |||||||||||||||||    
T  50146308 ggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgttc 50146407  T
Q  319 tttt 322  Q
    ||||    
T  50146408 tttt 50146411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 6221690 - 6221791
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||| |||||| || | |||||||| | | | |||||||| |||||||| ||| ||||||||||||||| |||||| |||||||||||||||||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacattgttc 6221788  T
Q  319 ttt 321  Q
    |||    
T  6221789 ttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 14146224 - 14146270
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14146224 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 14146270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27906995 - 27906949
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27906995 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 35392295 - 35392384
Alignment:
Q  232 tacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||| |||||||||| ||| | ||||||||||||||| |||||||||||||||  ||||||||| |||||| |||||| |||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacattattctttt 35392384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3406342 - 3406388
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3406342 gtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctca 3406388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 3440478 - 3440432
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  3440478 gtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctca 3440432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 6771715 - 6771761
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  6771715 gtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctca 6771761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 6888488 - 6888534
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  6888488 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 6888534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 41697326 - 41697284
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41697326 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 41697284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 322
Target Start/End: Complemental strand, 10926052 - 10925951
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaa-atataaatagaacattgttctt 320  Q
    ||||||||||||||||||| ||||||| || ||| || | | |||||||||| ||| |||||||||| ||||||||| |  ||||||||| |||||||||    
T  10926052 tcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaatattgttctt 10925953  T
Q  321 tt 322  Q
    ||    
T  10925952 tt 10925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16139979 - 16140025
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  16139979 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggtctca 16140025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 10912141 - 10912095
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  10912141 gtgcgaacagctcaaacgagctgggcctcctccaaggatgggcctca 10912095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 5028021 - 5027982
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatg 59  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  5028021 gtgcaaacagctcaaccgagctgggcctcccccaaggatg 5027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 23181730 - 23181776
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||| ||||||||||| ||| ||| |||||||||||    
T  23181730 gtgcaaacagctcaaccgagctgggccacccccaatgatgggcctca 23181776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 20 - 321
Target Start/End: Complemental strand, 38209888 - 38209590
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             ||||| |||||||||||||||||||||||||||||||||     
T  38209888 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttttt---atatcaagtataatggtggtttctttttaggcccccttaa 38209792  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209791 tatctcttaggccccctaagattatttcattctctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 38209692  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  38209691 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 38209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 10978857 - 10979009
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10978857 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatata 10978956  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10978957 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 10979009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 47128944 - 47129096
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47128944 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatata 47129043  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47129044 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 47129096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 126 - 322
Target Start/End: Original strand, 55255182 - 55255366
Alignment:
Q  126 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55255182 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 55255281  T
Q  226 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||||||             || |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  55255282 catgtatacggtagtcattttcacctctgggtg------------gcggcaccttgtatttatcttttaaaaaatataaatggaacattgctctttt 55255366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 34768724 - 34768572
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34768724 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatata 34768625  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  34768624 tacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 34768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 170 - 312
Target Start/End: Original strand, 13460164 - 13460306
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  13460164 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatata 13460263  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaaca 312  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13460264 tacgacaccttgtatttatcttttaaaaaatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 174 - 322
Target Start/End: Original strand, 48209201 - 48209349
Alignment:
Q  174 taggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacg 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  48209201 taggattattagaattagttcttcttgattttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacg 48209300  T
Q  274 acaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48209301 gcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 48209349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 32128540 - 32128693
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  32128540 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatat 32128639  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  32128640 atacgacaccttatatttatcttttaaaaaatataaatagaacattgctctttt 32128693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 34027536 - 34027681
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34027536 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatata 34027635  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  34027636 tacgacaccttatatttatcttttaaaaaatataaatagaacattg 34027681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 10428355 - 10428202
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattt--------tcacctctgggtgtac 261  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||    
T  10428355 cttttaggattattataattagttcctcttgattttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtac 10428256  T
Q  262 cgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10428255 cgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 10428202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 2790892 - 2790739
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2790892 tcttttaggcctattagaattaggtcctcttgcttttgccattaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 2790793  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  2790792 atacggtaccttatatttatcttttaaaaaatataaatagaacattgttctttt 2790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 43455682 - 43455529
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||| ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43455682 tcttttaggcctatttgaattaggtcctcttactttcggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 43455583  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  43455582 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 43455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 35779475 - 35779325
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||||||| ||||| |||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  35779475 cttttaggcctattagaattagttcctcttgcttttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatata 35779376  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  35779375 tacgacaccttgtatttatcttttaaaaaatat-aatagaacattgctcttt 35779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 37777373 - 37777229
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37777373 cttttaggcctattagaattaggtcatcttgcttttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatata 37777274  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||| |||||| |||||||||||||||||||||||||||||||||    
T  37777273 tacggcaccttatatttatcttttaaaaaatataaatagaacatt 37777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 54083392 - 54083240
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  54083392 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatata 54083293  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  54083292 tacggcaccttatatttatcttttaaaaaatataaatagatcattgttttttt 54083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 54780771 - 54780886
Alignment:
Q  207 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  307 agaacattgttctttt 322  Q
    ||||||||| ||||||    
T  54780871 agaacattgctctttt 54780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 16844977 - 16845131
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||    
T  16844977 tcttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatat 16845076  T
Q  269 atacgacaccttgtatttatctttt-aaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  16845077 atacgacaccttatatttatcttttaaaaaaatataaatagaacattgctctttt 16845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 19498461 - 19498611
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||  |||    
T  19498461 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--ata 19498558  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19498559 tacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 19498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 32915370 - 32915494
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32915370 ttgattttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaa 32915469  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  32915470 aatataaatagaacatcgctctttt 32915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 1105517 - 1105632
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  1105517 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaa 1105616  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  1105617 aatataaatagaacat 1105632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 37514644 - 37514759
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37514644 ttgattttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaa 37514743  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  37514744 aatataaatagaacat 37514759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 40089473 - 40089609
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  40089473 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatata 40089572  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaata 307  Q
    |||| |||||| |||||||||||| |||||||||||||    
T  40089573 tacggcaccttatatttatctttt-aaaaatataaata 40089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 5128964 - 5128852
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  5128964 ttgattttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaa 5128865  T
Q  298 aatataaatagaa 310  Q
    |||||||||||||    
T  5128864 aatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 23509948 - 23509846
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  23509948 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatata 23509849  T
Q  270 tac 272  Q
    |||    
T  23509848 tac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 16882545 - 16882393
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||| ||||||| |||  ||||||||||||||||||||| | ||||||||| |||||    
T  16882545 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatata 16882446  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
     ||| |||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  16882445 cacggcaccttatatttatcttttaaaaagtataaatagaacattgttttttt 16882393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 35465064 - 35465215
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || | ||| |||||||||||||||||| |||||||||||||||||||| |||||||| | | |||||||||||||||    
T  35465064 cttttaggcctattagaattaggtcatgttgcttttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatata 35465163  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  35465164 tacg-caccttttatttatcttgtaaaaaatataaatataacattgttctttt 35465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 24969394 - 24969529
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         
T  24969394 cttttaggcctattagaattagatcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----- 24969488  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
         |||||| |||||||||||||||||||||||||||| |||||    
T  24969489 -----caccttatatttatcttttaaaaaatataaatagatcattg 24969529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 38352405 - 38352271
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||         
T  38352405 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----- 38352311  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
         |||||| |||||||||||||||||||||||||||| ||||    
T  38352310 -----caccttatatttatcttttaaaaaatataaatagatcatt 38352271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 36118559 - 36118460
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||| ||||||||||||||||| |||||||  | |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 36118460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 52468292 - 52468395
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||| |||||||||| |||||||||| ||| ||||   |||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 52468391  T
Q  319 tttt 322  Q
    ||||    
T  52468392 tttt 52468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 36178684 - 36178778
Alignment:
Q  225 tcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||| |||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattgttct 36178778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 17679432 - 17679509
Alignment:
Q  245 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctctttt 17679509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 27112036 - 27112135
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||| | | |||||| |||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattgttc 27112135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaata 301  Q
    ||||||||||||||| |||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 219 - 317
Target Start/End: Complemental strand, 2135422 - 2135324
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||||||||| |||||| |||| || || |||| ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgtt 2135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 39329492 - 39329390
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||| |||||||||||   ||||||| || |||||||| | ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  39329492 gttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttct 39329393  T
Q  320 ttt 322  Q
    |||    
T  39329392 ttt 39329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 51964736 - 51964820
Alignment:
Q  241 cattttcacctctgggtgtaccgcatatatacgacaccttgtatttatctttt---aaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||   |||||||||||||||||||||| ||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctctttt 51964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 39655332 - 39655252
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||| |||||||||||||||||| ||  || |||||||||||||||||||||| |||||||||||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttt 39655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 10042101 - 10041998
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||| ||||||||||||| |||||||| | | |||||| | |||| ||||| |||||||||||||| |||| |||||| |||||||||||||||||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattgttc 10042002  T
Q  319 tttt 322  Q
    ||||    
T  10042001 tttt 10041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 24396940 - 24397043
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||||| |||| |||||||||| || ||||| | |||||||||  |||||| ||||||||||||||||||| |||||| || |||||||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttc 24397039  T
Q  319 tttt 322  Q
    ||||    
T  24397040 tttt 24397043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaa-aaaatataaatagaacat 313  Q
    ||||||||| |||||||||||| |||||||||| ||| |||| ||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 51691980 - 51691913
Alignment:
Q  255 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  51691980 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 16922409 - 16922327
Alignment:
Q  240 tcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| ||||  ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctctttt 16922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 9578736 - 9578662
Alignment:
Q  249 cctctgggtgtaccgcatatatacgac-accttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9578736 cctctggatgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36362964 - 36362869
Alignment:
Q  227 atgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||| |||||| |||| ||| | ||||||||  ||||||||||| ||| |||||||||||||||||||||| |||| ||| ||||||||||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 1105450 - 1105496
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1105450 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 1105496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 10431489 - 10431443
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10431489 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 10431443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 45656181 - 45656279
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    ||||| ||||||||||| | || |||||||| | ||| | || |||||||||| ||||||||| |||||||||||||||||| |||||| |||||||||    
T  45656181 ggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacattgtt 45656279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 55255099 - 55255145
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  55255099 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 55255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatag 308  Q
    |||| |||||||||| | || | ||||||| || ||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 5129030 - 5128984
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  5129030 gtgcaaacagctcaaacgagctgggcctccctcaaggataggcctca 5128984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 9579516 - 9579474
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9579516 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 9579474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 9585211 - 9585169
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9585211 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 9585169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 17679236 - 17679282
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  17679236 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctca 17679282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 45560751 - 45560705
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45560751 gtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctca 45560705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 47128000 - 47128046
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  47128000 gtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctca 47128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 48208469 - 48208515
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48208469 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 48208515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 23508564 - 23508515
Alignment:
Q  267 atatacgacaccttgtatttatcttttaaaaaa-tataaatagaacattg 315  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattg 23508515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 15735102 - 15735196
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||| | |||||||  | | ||||||     ||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||    
T  15735102 gttcctcatgtatacggtaatgattttcattttttggtgta-----tatatacgacgtcttgtatttatcttttaaaaaatttaaatagaacactgttct 15735196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 24614018 - 24614061
Alignment:
Q  278 cttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 13459803 - 13459849
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13459803 gtgcaaacagctcaaacgagctgagcctcccttaaggatgggcctca 13459849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 30507162 - 30507120
Alignment:
Q  280 tgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttt 30507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 34769580 - 34769534
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  34769580 gtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctca 34769534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 37514577 - 37514623
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  37514577 gtgcaaacagctcaaacgagctgggcctcctccaaggatgggcctca 37514623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 9578782 - 9578733
Alignment:
Q  174 taggattattagaattagttcctcttgattttggtgttaggtgggggttcctc 226  Q
    ||||||||||| |||||||||   |||||||||||||||||||||||||||||    
T  9578782 taggattattataattagttc---ttgattttggtgttaggtgggggttcctc 9578733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27596686 - 27596640
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||    
T  27596686 gtgcgaacagctcaaacgagctgggcctcccccgaggatgggcctca 27596640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 54779459 - 54779500
Alignment:
Q  19 agtgcaaacagctcaaacgagctgggcctccctcaaggatgg 60  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  54779459 agtgcaaacagctcaaccgagctgggcctcccccaaggatgg 54779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 32915316 - 32915351
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaag 55  Q
    |||||||||||||||||||| |||||||||||||||    
T  32915316 gtgcaaacagctcaaacgagttgggcctccctcaag 32915351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 29425237 - 29425187
Alignment:
Q  257 tgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaata 307  Q
    ||||| ||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  29425237 tgtactgcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 35780603 - 35780557
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||| ||||||||||||||| || |||| |||||||    
T  35780603 gtgcaaacagctcaaccgagctgggcctcccccacggataggcctca 35780557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 23510917 - 23510888
Alignment:
Q  37 gagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||    
T  23510917 gagctgggcctccctcaaggatgggcctca 23510888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 30083360 - 30083405
Alignment:
Q  93 tggtggtttctttttaggcccccttagtatctcttaggccccctaa 138  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||||    
T  30083360 tggtggtttctttttaggggcccttaatatctcttagaccccctaa 30083405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 2135491 - 2135447
Alignment:
Q  171 ttttaggattattagaattagttcctcttgattttggtgttaggt 215  Q
    ||||||| ||||||||||| | |||||||| ||||||||||||||    
T  2135491 ttttaggcttattagaattgggtcctcttgcttttggtgttaggt 2135447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 34756661 - 34756362
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  34756661 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttttt--atatccagtataatggtggtttctttttaggcccccttaa 34756564  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34756563 tatctcttaggcccc-taagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttgttgttaggtgggg 34756465  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  34756464 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 34756365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 16592222 - 16592070
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16592222 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatata 16592123  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  16592122 tacgacaccctgtatttatcttttagaaaatataaatagaacattgctctttt 16592070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 30854282 - 30854433
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30854282 cttttaggattattagaattagttcctctt-attttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatata 30854380  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30854381 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 30854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 38869512 - 38869359
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  38869512 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 38869413  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  38869412 atacgacaccttatatttatcttttaaaaaatataaatagaacattgctctttt 38869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 27078963 - 27079115
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  27078963 cttttaggattattggaattagttcctctatattttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatata 27079062  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27079063 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 27079115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 16198942 - 16198797
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  16198942 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatata 16198843  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  16198842 tacgacaccttatatttatcttttaaaaaatataaatagaacattg 16198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 28822491 - 28822338
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  28822491 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatat 28822392  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  28822391 atacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 9364242 - 9364388
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9364242 tcttttaggtctattagaattaggtcctcttgcttttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 9364341  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9364342 atacggcaccttatatttatcttttaaaaaatataaatagaacattg 9364388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 15480209 - 15480094
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15480209 ttgattttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaa 15480110  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  15480109 aatataaatagaacat 15480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 19523179 - 19523293
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19523179 ttgattttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 19523278  T
Q  298 aatataaatagaaca 312  Q
    |||||||||||||||    
T  19523279 aatataaatagaaca 19523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 16799476 - 16799331
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  16799476 tcttttaggtctattagaattaggtcctcttgcttttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatat 16799377  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  16799376 atacggcaccttatatttattttttaaaaaatataaatagaacatt 16799331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 40389684 - 40389539
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||    
T  40389684 cttttaggcctattagaattaggtcctcttgcttttagtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatata 40389585  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  40389584 tacgacaccttatatttatcttttaaaaaatataaatagaacattg 40389539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 2274870 - 2274994
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  2274870 ttgattttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaa 2274969  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  2274970 aatataaatagaacatcgctctttt 2274994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 201 - 322
Target Start/End: Complemental strand, 36187996 - 36187875
Alignment:
Q  201 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaat 300  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  36187996 attttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaat 36187897  T
Q  301 ataaatagaacattgttctttt 322  Q
    ||||||||||||| | ||||||    
T  36187896 ataaatagaacatcgctctttt 36187875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 7670876 - 7671022
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| | |||    
T  7670876 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaata 7670975  T
Q  270 tacgacaccttgtatttatctttt-aaaaaatataaatagaacattg 315  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||||    
T  7670976 tacggcaccttatatttatcttttaaaaaaatataaatagaacattg 7671022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 27924033 - 27924172
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  27924033 tcttttaggcctattagaattaggtccttttgcttttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatat 27924132  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatag 308  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  27924133 atacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 23284164 - 23284058
Alignment:
Q  216 gggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  316 ttctttt 322  Q
     ||||||    
T  23284064 ctctttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 322
Target Start/End: Complemental strand, 22986694 - 22986554
Alignment:
Q  171 ttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatat 270  Q
    ||||||||||||||||||||||||||||| ||||| |           |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22986694 ttttaggattattagaattagttcctcttaatttttg-----------ggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatat 22986606  T
Q  271 acgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||    
T  22986605 acgacactttgtatttgtcttttaaaaaatattaatagaacattgctctttt 22986554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 31194706 - 31194608
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 36868973 - 36868872
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    |||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattgttctt 36868874  T
Q  321 tt 322  Q
    ||    
T  36868873 tt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 14318484 - 14318382
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||  | ||| |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 14318385  T
Q  319 ttt 321  Q
    |||    
T  14318384 ttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 7338021 - 7338102
Alignment:
Q  240 tcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 31881528 - 31881430
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||| ||||||| |||||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 1366625 - 1366522
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||| ||||||||||| |||||||| | | |||||| ||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattgttc 1366526  T
Q  319 tttt 322  Q
    ||||    
T  1366525 tttt 1366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 26719045 - 26718946
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||| ||||||| |||||||||| || ||||| |||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26718946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 26988789 - 26988690
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||| ||||||| |||||||||| || ||||| |||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacattattcttt 26988690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 33037781 - 33037884
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||| |  ||||||||| |||||||||  ||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttc 33037880  T
Q  319 tttt 322  Q
    ||||    
T  33037881 tttt 33037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 2412089 - 2412191
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||| ||||| |||||||| | ||| || | |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattgttc 2412188  T
Q  319 ttt 321  Q
    |||    
T  2412189 ttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 322
Target Start/End: Complemental strand, 2024738 - 2024638
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||||| |||||| ||||||| || |||||||| | |||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  2024738 tcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttcttt 2024639  T
Q  322 t 322  Q
    |    
T  2024638 t 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 34425904 - 34426007
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||| | ||||| | || | |||||| | |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgttc 34426003  T
Q  319 tttt 322  Q
    ||||    
T  34426004 tttt 34426007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 10407464 - 10407565
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    ||||||||| |||||||||| |||||||| | | | |||||  ||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10407464 ttcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttctt 10407563  T
Q  321 tt 322  Q
    ||    
T  10407564 tt 10407565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 22648824 - 22648734
Alignment:
Q  230 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    ||||| ||||| ||| |||||| ||| ||| || |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 24395741 - 24395835
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||||||||| |||||||| || |||||||||| ||| ||||  | |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 41911716 - 41911614
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||| |||||| |||| ||||| || | |||||||||||| ||||||||||||||||||||| ||||||||||||  ||| | |||||||||||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaaattaagttgaacattgttc 41911617  T
Q  319 ttt 321  Q
    |||    
T  41911616 ttt 41911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 11242417 - 11242314
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||| || || ||| |||| | |||||||||  ||  |||||||||||||||||||||  |||||||||||||||||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttc 11242318  T
Q  319 tttt 322  Q
    ||||    
T  11242317 tttt 11242314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 10543682 - 10543776
Alignment:
Q  227 atgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||||||| |||||||||| ||| |||| |||||||||||  |||||| ||||||||||||||||||| ||| | ||||||| ||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacattattcttt 10543776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 40794426 - 40794323
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||| ||||||||||||||||| |||||||||| | |||||| |  |||| |||| | | |||||||| ||||||||||||| |||||| ||||||||||    
T  40794426 ggtttctcatgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttc 40794327  T
Q  319 tttt 322  Q
    ||||    
T  40794326 tttt 40794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 15480276 - 15480230
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15480276 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 15480230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 19523112 - 19523158
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19523112 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 19523158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 606209 - 606258
Alignment:
Q  273 gacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  606209 gacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 15639644 - 15639749
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttt---taaaaaatataaatagaacattg 315  Q
    ||||||| |||||||||  ||| ||||||| || ||| |||| |||||||||||| ||||||||||||||||||    |||||| |||||| ||||||||    
T  15639644 ggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaaaaaaataaattgaacattg 15639743  T
Q  316 ttcttt 321  Q
    ||||||    
T  15639744 ttcttt 15639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 322
Target Start/End: Original strand, 17344969 - 17345060
Alignment:
Q  231 atacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||| ||||| | || ||||||||||||||||| | |||| |||||||||||  | |||||||| |||||||||||||||| ||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattgttatttt 17345060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 31881637 - 31881591
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31881637 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctca 31881591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 36188066 - 36188020
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  36188066 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 36188020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22987514 - 22987470
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 64  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  22987514 gtgcaaacagctcaaacgagctgggcctccctcaaagatgggcct 22987470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 30853285 - 30853331
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||    
T  30853285 gtgcaaacagctcaaacgagctgggcctccttcaaggatggacctca 30853331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 27530543 - 27530587
Alignment:
Q  278 cttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttt 27530587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2274817 - 2274863
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||    
T  2274817 gtgcaaacagctcaaatgagttgggcctccctcaaggatggacctca 2274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 16592892 - 16592846
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||    
T  16592892 gtgcaaacagctcaaacgagctggacctcctttaaggatgggcctca 16592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 31194814 - 31194768
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  31194814 gtgcaaacaactcaaacgaactgggcctctctcaaggatgggcctca 31194768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 35080806 - 35080766
Alignment:
Q  282 tatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttctttt 35080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 22875003 - 22875041
Alignment:
Q  279 ttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaatattgtt 22875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 3155022 - 3155320
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  3155022 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcattttttttt----atatccagtataatggtggtttctttttaggcccccttaa 3155117  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3155118 tatctcttaggtcccctaagattatttcattccctcacaaggatggacctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 3155217  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  3155218 gttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 3155317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 4505698 - 4505997
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  4505698 gtgcaaacagctcaaacgagctgggcctccctcaatgatgggcctcatttttttttt---atatccagtataatggtggtttctttttaggcccccttaa 4505794  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4505795 tatctcttagaccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 4505894  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  4505895 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 4505994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 6964811 - 6965110
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||     
T  6964811 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttttt---atatccagtataatggtggtttctttttaggcccccttaa 6964907  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6964908 tatctcttaggctccctaagattatttcattccctcacaaggatgggcctcttttagaattattagaattagttcctcttgattttggtgttaggtgggg 6965007  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||    
T  6965008 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctct 6965107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 314
Target Start/End: Complemental strand, 8907376 - 8907086
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    ||||||||||||||||| |||||| |||||||||| |||||| ||||             ||||| ||||||||||||||||||||||||||| |||||     
T  8907376 gtgcaaacagctcaaacaagctggacctccctcaaagatgggtctca----tttttttttatatctagtataatggtggtttctttttaggcctccttaa 8907281  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8907280 tatctcttaggccccctaagattatttcattccctcacaaggatgggcttcttttaggattattagaattaattcctcttgattttggtgttaggtgggg 8907181  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  8907180 gtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaatagaacatt 8907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 126 - 322
Target Start/End: Complemental strand, 12337643 - 12337447
Alignment:
Q  126 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12337643 ttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcct 12337544  T
Q  226 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12337543 catgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 12337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 29940013 - 29939861
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29940013 cttttaggtctattagaattagttcctcttgcttttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatata 29939914  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  29939913 tacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctctttt 29939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 9045979 - 9046133
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9045979 tcttttaggcttattagaattaggtcctcttgctttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 9046078  T
Q  269 atacgacaccttgtatttatctttt-aaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  9046079 atacggcaccttatatttatcttttaaaaaaatataaatagaacattgttctttt 9046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 24410398 - 24410535
Alignment:
Q  181 attagaattagttcctcttgattttggtgttaggtgggg-gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacacct 279  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24410398 attagaattaggtcctcttgtttttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacct 24410497  T
Q  280 tgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    | ||||||||||||||||||||||||||||||||||||    
T  24410498 tatatttatcttttaaaaaatataaatagaacattgtt 24410535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 3952985 - 3953149
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  3952985 ttgattttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaa 3953084  T
Q  298 aatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttcat 362  Q
    |||||||||||||||| | |||||        |||||||| |||||||||||||||| |||||||    
T  3953085 aatataaatagaacatcggtctttaaaaaaaatacattttgattttatcactgacctcttttcat 3953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 10762716 - 10762565
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10762716 cttttaggcctattagaattaggtcctcttgcatttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatata 10762617  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||  |||||| |||||||||||||||||||||||||||||||||| |||||    
T  10762616 taccgcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 26716089 - 26716232
Alignment:
Q  180 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacacct 279  Q
    |||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  26716089 tattagaattaggttctcttgctttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcacct 26716188  T
Q  280 tgtatttatctttt-aaaaaatataaatagaacattgttctttt 322  Q
    | |||||||||||| |||||||||||||||||||||| ||||||    
T  26716189 tatatttatcttttaaaaaaatataaatagaacattgctctttt 26716232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 7162763 - 7162887
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  7162763 ttgattttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaa 7162862  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  7162863 aatataaatagaacatcgctctttt 7162887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 27506891 - 27506746
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| || ||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  27506891 cttttaggcctattagaattaggtcatcttgcttttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatata 27506792  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||    
T  27506791 tacggcaccttatatttatcttttaaaaaatataaatagatcattg 27506746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 16097008 - 16097111
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| |||||| |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 16097107  T
Q  319 tttt 322  Q
    ||||    
T  16097108 tttt 16097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 320
Target Start/End: Original strand, 38400798 - 38400899
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||| ||  |||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 38400897  T
Q  319 tt 320  Q
    ||    
T  38400898 tt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 40636164 - 40636241
Alignment:
Q  245 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 40636241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 34693991 - 34694078
Alignment:
Q  235 ggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34694078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 34716403 - 34716490
Alignment:
Q  235 ggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 24035645 - 24035544
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    |||||||||||| ||||||| |||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 24035546  T
Q  321 tt 322  Q
    ||    
T  24035545 tt 24035544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 21665802 - 21665699
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||| | | | |||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  319 tttt 322  Q
    ||||    
T  21665702 tttt 21665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 28425812 - 28425709
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||| |||| |||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattgttc 28425713  T
Q  319 tttt 322  Q
    ||||    
T  28425712 tttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 7742236 - 7742132
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaa-aaaatataaatagaacattgtt 317  Q
    ||||||||||| ||||| ||||  ||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  7742236 ggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattgtt 7742137  T
Q  318 ctttt 322  Q
    |||||    
T  7742136 ctttt 7742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 13800647 - 13800543
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctct-gggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||||||| ||||||  ||||| |||||||||| | ||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgtt 13800548  T
Q  318 ctttt 322  Q
    |||||    
T  13800547 ctttt 13800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 12134142 - 12134039
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||| |||||||||||||| |||||||| | |||||||| ||||||||||||  |||||||||||||||||||||   | |||||||||||||||||    
T  12134142 ggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttc 12134043  T
Q  319 tttt 322  Q
    ||||    
T  12134042 tttt 12134039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 16227470 - 16227368
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||| |||||||  ||||| ||||||| || | |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16227470 ggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattgttc 16227371  T
Q  319 ttt 321  Q
    |||    
T  16227370 ttt 16227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 5952791 - 5952716
Alignment:
Q  245 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||| ||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctctttt 5952716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttat 288  Q
    |||||||||||||||||||||| |||||||| | ||||||||  ||||||||||||||||||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 42029168 - 42029247
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||| | |||||||  ||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3952918 - 3952964
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3952918 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 11912859 - 11912757
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||| |||||||||||||| ||||||| || ||| ||||  ||||||||||| ||| |||||||||| ||||   |||| |||||||||||||||||    
T  11912859 ggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattgttc 11912760  T
Q  319 ttt 321  Q
    |||    
T  11912759 ttt 11912757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7162696 - 7162742
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  7162696 gtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctca 7162742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 12337736 - 12337690
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12337736 gtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctca 12337690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 34693166 - 34693212
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  34693166 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 34715578 - 34715624
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  34715578 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34715624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 11952643 - 11952588
Alignment:
Q  265 atatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  11952643 atatatacgacactttgtatt-atcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 22727598 - 22727530
Alignment:
Q  225 tcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatctttt 293  Q
    ||||||||| |||||| |||||||| | ||||||||||||||||||||| ||| | |||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 8327617 - 8327671
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcc 224  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||    
T  8327617 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcc 8327671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 10252468 - 10252518
Alignment:
Q  271 acgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  10252468 acgacaccttgtatttatcttttaaaaaatttaaattgaacatttttcttt 10252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 40635981 - 40636023
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 62  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  40635981 gtgcaaacagctcaaacgagttgggcctccctcaaggatgggc 40636023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 22727497 - 22727456
Alignment:
Q  281 gtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttctttt 22727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 3399528 - 3399572
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 64  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  3399528 gtgcaaacagctcaaacgagttggacctccctcaaggatgggcct 3399572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 41213975 - 41213929
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||||    
T  41213975 gtgcaaacagcttaaacgagctgggtctccctcgaggatgggcctca 41213929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 8327674 - 8327714
Alignment:
Q  275 caccttgtatttatcttttaaaaaatataaatagaacattg 315  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattg 8327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 12337669 - 12337633
Alignment:
Q  80 atatccagtataatggtggtttctttttaggccccct 116  Q
    |||| ||||||||||||||||||||||||||||||||    
T  12337669 atattcagtataatggtggtttctttttaggccccct 12337633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Complemental strand, 1396730 - 1396698
Alignment:
Q  290 ttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||| ||||||    
T  1396730 ttttaaaaaatataaatagaacattgctctttt 1396698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 5952977 - 5952949
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctc 48  Q
    |||||||||||||||||||||||||||||    
T  5952977 gtgcaaacagctcaaacgagctgggcctc 5952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 11952708 - 11952644
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgta 283  Q
    |||||||||||||| | ||||| ||||||| || || ||||| | |||||||||||||| |||||    
T  11952708 ggttcctcatgtatgcagtagtgattttcatctatgagtgtatcacatatatacgacactttgta 11952644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 44914932 - 44914863
Alignment:
Q  292 ttaaaaaatataaatagaacattgttcttttnnnnnnntacattttaattttatcactgacctattttca 361  Q
    ||||||||| |||||||||||||||||||||       |||||||| ||||||| || ||||| ||||||    
T  44914932 ttaaaaaatttaaatagaacattgttcttttaaaaaagtacatttttattttattacggacctcttttca 44914863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 18777065 - 18776764
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcannnnnnnnnnnnnatatccagtataatggtggtttctttttaggcccccttag 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||| ||||||||     
T  18777065 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcatttttttttttt-atatccagtataatggtggtttctttttagacccccttaa 18776967  T
Q  120 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18776966 tatctcttaggccccctaagattatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgtttttggtgttaggtgggg 18776867  T
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  18776866 gtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 18776767  T
Q  320 ttt 322  Q
    |||    
T  18776766 ttt 18776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 8171689 - 8171537
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8171689 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatata 8171590  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8171589 tacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 8171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 29077172 - 29077324
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29077172 ctttcaggattgttagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatata 29077271  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29077272 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 20091431 - 20091279
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20091431 cttttaggcctattagaattaggtcctcttacttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatata 20091332  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  20091331 tacggcaccttatatttatcttttaaaaaatataaatagatcattgttttttt 20091279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 24525835 - 24525688
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  24525835 cttttaggcatattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatata 24525736  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
     ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  24525735 cacggcaccttatatttatcttttaaaaaatataaatagaacattgtt 24525688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 48983994 - 48983842
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||  |||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  48983994 cttttaggcctattagaattaagtcctcttacttttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatata 48983895  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  48983894 tacgacaccttatatttatcttttaaaaaatataaatagatcattgttttttt 48983842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 171 - 315
Target Start/End: Complemental strand, 23551220 - 23551075
Alignment:
Q  171 ttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatat 270  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23551220 ttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatat 23551121  T
Q  271 acgacaccttgtatttatcttttaa-aaaatataaatagaacattg 315  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||    
T  23551120 acgacaccttatatttatcttttaaaaaaatataaatagatcattg 23551075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 38415027 - 38414874
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  38415027 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatat 38414928  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||| |||||| |||||||||||||||||||| ||||||||| ||| ||||||    
T  38414927 atacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctctttt 38414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 10955464 - 10955588
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  10955464 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaa 10955563  T
Q  298 aatataaatagaacattgttctttt 322  Q
    |||||||||||||||| | ||||||    
T  10955564 aatataaatagaacatcgctctttt 10955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 12596409 - 12596294
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 297  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  12596409 ttgattttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaa 12596310  T
Q  298 aatataaatagaacat 313  Q
    ||||||||||||||||    
T  12596309 aatataaatagaacat 12596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 47985121 - 47984974
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  47985121 tcttttaggcctattagaattaggtcctcttgctttttgtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatat 47985022  T
Q  269 atacgacaccttgtatttatcttttaa-aaaatataaatagaacattg 315  Q
    ||||| |||||| ||||| |||||||| ||||||||||||||||||||    
T  47985021 atacggcaccttatatttttcttttaaaaaaatataaatagaacattg 47984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 19692045 - 19692198
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||  |||||||||||||| | ||||||||||||||    
T  19692045 tcttttaggcctattagaattaggtcctcttgcttttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatat 19692144  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||| | |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19692145 atatggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt 19692198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 315
Target Start/End: Complemental strand, 10329550 - 10329415
Alignment:
Q  180 tattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacacct 279  Q
    |||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| | || |||||||||| |||||    
T  10329550 tattagaattaggtcctcttgcttttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcacct 10329451  T
Q  280 tgtatttatcttttaaaaaatataaatagaacattg 315  Q
    | ||||||||||||||||||||||||||||||||||    
T  10329450 tatatttatcttttaaaaaatataaatagaacattg 10329415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 40357538 - 40357413
Alignment:
Q  140 attatttcattccctcacaaggatgggcctcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtag 239  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||        |||||||    
T  40357538 attattttattccctcacaaggatgggtctcttttaggattattagaattagttcatcttgattttggtgttaggtgggggttcc--------acggtag 40357447  T
Q  240 tcattttcacctctgggtgtaccgcatatatacg 273  Q
    ||||||||| |||| |||||||||||||||||||    
T  40357446 tcattttcatctcttggtgtaccgcatatatacg 40357413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 314
Target Start/End: Original strand, 8239637 - 8239783
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgg--gggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcata 267  Q
    ||||||||  |||||||||||| |||||||| ||||||||||| ||||  ||||||||||| ||||||||| |||||||||| | |||||||||| ||||    
T  8239637 cttttaggcctattagaattaggtcctcttgcttttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacata 8239736  T
Q  268 tatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||| ||| || ||||||| |||||||||||||||||||||||||    
T  8239737 tatacggcacattatatttattttttaaaaaatataaatagaacatt 8239783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 2611363 - 2611260
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||| || || |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 2611264  T
Q  319 tttt 322  Q
    ||||    
T  2611263 tttt 2611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 25010385 - 25010479
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgc 264  Q
    ||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25010385 cttttaggcctattagaattaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 25010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 9021898 - 9021799
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| | ||||||||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 230 - 321
Target Start/End: Complemental strand, 6765771 - 6765680
Alignment:
Q  230 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||| |||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 28749715 - 28749813
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 36891579 - 36891682
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||| |||||||| |||| ||||||| ||| |||||||||||||||||||||||| |||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacattattc 36891678  T
Q  319 tttt 322  Q
    ||||    
T  36891679 tttt 36891682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 26254015 - 26254097
Alignment:
Q  240 tcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 26254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 7398452 - 7398555
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||| |||||| |||||||||| | |||||| | |||||||| | |||||||||||||||||| ||||||| |||||||||||||||||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttc 7398551  T
Q  319 tttt 322  Q
    ||||    
T  7398552 tttt 7398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 23859077 - 23859174
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||| ||||||| || |||||||| ||||||||||||  || |||||||||||||||||||||| ||||||||||||| ||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacattattct 23859174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 33162418 - 33162338
Alignment:
Q  241 cattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 27237524 - 27237421
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||||| |||| |||||||||| | | |  | | ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 27237425  T
Q  319 tttt 322  Q
    ||||    
T  27237424 tttt 27237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 320
Target Start/End: Complemental strand, 36903022 - 36902924
Alignment:
Q  222 tcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    ||||||||||||| ||| | |||||||||| | |||||||  ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 23744808 - 23744900
Alignment:
Q  230 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    ||||||||||| ||||| | || | |||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttt 23744900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 12981327 - 12981430
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||| ||||| ||||| |||||||||| || ||||||||| |||||| |  ||||||||||||||||||||||||  ||||||||||||| |||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacattcttc 12981426  T
Q  319 tttt 322  Q
    ||||    
T  12981427 tttt 12981430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 20153206 - 20153297
Alignment:
Q  223 cctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    |||||||||||||| ||| ||||||| || ||||| || ||||||||||| |||| |||||||||||||||||||||| |||||| ||||||    
T  20153206 cctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 21763672 - 21763586
Alignment:
Q  235 ggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||| |||||||| | | |||||| ||||||||||||| || |||||||||||||||||||||| ||||||||||| ||||||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt 21763586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 23020583 - 23020482
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    ||||||||||||||||||||| |||||||||| || ||||   |||||||||| ||||||| ||||||||||||||||||| |||||  ||| |||||||    
T  23020583 gttcctcatgtatacggtagtgattttcacctttgagtgtgt-gcatatatacaacaccttatatttatcttttaaaaaatctaaatgaaacgttgttct 23020485  T
Q  320 ttt 322  Q
    |||    
T  23020484 ttt 23020482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 28749600 - 28749646
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28749600 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 28749646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 12419596 - 12419493
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||| |  |||| ||||||| || ||| |||| | || ||||| |  || |||||||||||||||||||||| |||||||||||||||||    
T  12419596 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattgttc 12419497  T
Q  319 tttt 322  Q
    ||||    
T  12419496 tttt 12419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 12596476 - 12596430
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12596476 gtgcaaacagctcaaacgagctgggcctccctcaaggatggccctca 12596430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 38971255 - 38971333
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaa 298  Q
    ||||||| ||| ||||||||| |||||||| | | ||||||   |||||||||||||||||||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 9014233 - 9014177
Alignment:
Q  265 atatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttcttt 321  Q
    |||||||| |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 18201138 - 18201237
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||| || ||||   |||||||||  | |||||||| |||||||| | || ||||||||||| ||||||||||| |||||||| ||||||||    
T  18201138 ggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatcattgttc 18201237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 9014863 - 9014782
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaata 307  Q
    |||| ||||||||||||||||| |||||||||| |||||       ||||||||||||| |||||||||||||||| ||||| ||||||    
T  9014863 ggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaatttaaata 9014782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10955397 - 10955443
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10955397 gtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctca 10955443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 17800320 - 17800257
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtat 284  Q
    ||||||||| |||||||||| |||||||| | |||||||||  ||||||||||||| |||||||    
T  17800320 ttcctcatgcatacggtagtgattttcacttttgggtgtacaacatatatacgacaacttgtat 17800257  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29076949 - 29076997
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcct--ccctcaaggatgggcctca 66  Q
    |||||||||||| |||||||| ||||||  |||||||||||||||||||    
T  29076949 gtgcaaacagcttaaacgagcagggcctccccctcaaggatgggcctca 29076997  T

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Target: scaffold0070 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 170 - 322
Target Start/End: Original strand, 1295 - 1447
Alignment:
Q  170 cttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatata 269  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1295 cttttaggattattaaaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatata 1394  T
Q  270 tacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||| || ||||||||||||||||||||||||||||||||||| || ||||||    
T  1395 tacggcagcttgtatttatcttttaaaaaatataaatagaacagtgctctttt 1447  T

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Target: scaffold0070; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 1030 - 1076
Alignment:
Q  20 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  1030 gtgcaaacagctcaaacgagctgggcctccctcaaggatggacctca 1076  T

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Target: scaffold0039 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 106489 - 106642
Alignment:
Q  169 tcttttaggattattagaattagttcctcttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||  ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  106489 tcttttaggcctattagatttaggtcctcttgcttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatat 106588  T
Q  269 atacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctttt 322  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  106589 atacgacaccttatatttatcttttaaaaaatataaatagaacattgttctttt 106642  T

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Target: scaffold1590 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 360 - 257
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 261  T
Q  319 tttt 322  Q
    ||||    
T  260 tttt 257  T

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Target: scaffold0012 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 206591 - 206489
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacattcttc 206492  T
Q  319 ttt 321  Q
    |||    
T  206491 ttt 206489  T

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Target: scaffold0097 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 38926 - 39024
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgtt 317  Q
    |||||||||| ||||||||||| |||||||| | || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgtt 39024  T

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Target: scaffold0182 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 24093 - 23993
Alignment:
Q  221 ttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttctt 320  Q
    ||||| ||| |||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  24093 ttccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttctt 23994  T
Q  321 t 321  Q
    |    
T  23993 t 23993  T

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Target: scaffold0018 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 173612 - 173515
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgt 316  Q
    ||||||||| |||||||||||| ||||| |||| |||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattgt 173515  T

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Target: scaffold0007 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 230960 - 230858
Alignment:
Q  220 gttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttct 319  Q
    |||||||||||||| |||||| |||||||||| ||||| || ||||||||||| |||||||  ||||||||||||| |||| ||||||||||||||||||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattgttct 230861  T
Q  320 ttt 322  Q
    |||    
T  230860 ttt 230858  T

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Target: scaffold0001 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 181899 - 181969
Alignment:
Q  198 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatat 268  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  181899 ttgattttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 183106 - 183155
Alignment:
Q  264 catatatacgacaccttgtatttatcttttaaaaaatataaatagaacat 313  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacat 183155  T

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Target: scaffold1320 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 1355 - 1458
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgttc 318  Q
    ||||||||||||||||| |||| |||||||| | ||||||||  ||||||||||  |||||| ||||||||||||||||| | ||||||||||||| |||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacattattc 1454  T
Q  319 tttt 322  Q
    ||||    
T  1455 tttt 1458  T

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Target: scaffold0022 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 40086 - 40191
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaata--taaatagaacattgt 316  Q
    |||| |||||||||||| | || ||||||||||  ||||||||  |||| ||||| ||||||||||||||||||||||||| |  |||||||||||||||    
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 40185  T
Q  317 tctttt 322  Q
    ||||||    
T  40186 tctttt 40191  T

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Target: scaffold0022; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 322
Target Start/End: Original strand, 138146 - 138251
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaata--taaatagaacattgt 316  Q
    |||| |||||||||||| | || ||||||||||  ||||||||  |||| ||||| ||||||||||||||||||||||||| |  |||||||||||||||    
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 138245  T
Q  317 tctttt 322  Q
    ||||||    
T  138246 tctttt 138251  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  242 attttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaa 295  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 16028 - 16095
Alignment:
Q  219 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtattt 286  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||||||||| |||||||| |||||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0227; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 16123 - 16161
Alignment:
Q  276 accttgtatttatcttttaaaaaatataaatagaacatt 314  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatt 16161  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 23879 - 23976
Alignment:
Q  214 gtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 311  Q
    ||||||||| ||  ||||||||||||||||||| |  | |||| || || || | ||||| |||||  ||||||| |||||||||| |||||||||||    
T  23879 gtgggggtttcttgtgtatacggtagtcatttttatttttgggggttccccaaaaatacggcacctcatatttattttttaaaaaaaataaatagaac 23976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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