View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2962_low_18 (Length: 203)
Name: NF2962_low_18
Description: NF2962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2962_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8101738 - 8101565
Alignment:
| Q |
17 |
attttctgtactgctaagggaaaaactgttatagctcgaggatcacgtgctccaactaaaacccaagactcacaagcataggatccaatcacataattag |
116 |
Q |
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| T |
8101738 |
attttctgtactgctaaggaaaaaactgttatagctcgaggatcacgtgctccaactaaaacccaagactcaaaagcataggatccaatcacataattag |
8101639 |
T |
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| Q |
117 |
ttgcattttggattttgtgaagactcagttatgagc-ttttgtttgaagaaaaatactaacgactgcctctctg |
189 |
Q |
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| T |
8101638 |
ttgcattttggattttgtgaagactcagttatgagctttttgtttgaaggaaaatattaacaactgcctttctg |
8101565 |
T |
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