View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2963_low_18 (Length: 215)
Name: NF2963_low_18
Description: NF2963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2963_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 51806128 - 51806334
Alignment:
| Q |
1 |
gatgtctcctttgttgtcacaggtgattccggtgaagtcgcagattggtttatccactttgcttacaccccaatcaaaagggtagtttcctgagagagac |
100 |
Q |
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| T |
51806128 |
gatgtctcctttgttgtcacaggtgattccggtgaagtcgcagattggtttatccactttgcttacaccccaatcaaaagggtagtttcctgagagagac |
51806227 |
T |
|
| Q |
101 |
tctttcattagagnnnnnnnctcagattggtttgtgctgataacatgtgacatgttggtcatggaaataataactattagtccaaagaagaagaatggtt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51806228 |
tctttcattagagaaaaaaactcagattggtttgtgctgataacatgtgacatgttggtcatggaaataataactattagtccaaagaagaagaatggtt |
51806327 |
T |
|
| Q |
201 |
gatgatg |
207 |
Q |
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||||||| |
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| T |
51806328 |
gatgatg |
51806334 |
T |
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