View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2964_high_1 (Length: 937)

Name: NF2964_high_1
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2964_high_1
NF2964_high_1
[»] chr8 (25 HSPs)
chr8 (271-928)||(36467336-36467995)
chr8 (32-200)||(36468054-36468222)
chr8 (290-367)||(4798556-4798631)
chr8 (291-367)||(17987464-17987538)
chr8 (295-367)||(40329619-40329690)
chr8 (291-368)||(39484384-39484459)
chr8 (291-367)||(5184902-5184976)
chr8 (291-367)||(15042380-15042454)
chr8 (291-368)||(23857337-23857413)
chr8 (291-331)||(10970272-10970312)
chr8 (295-367)||(42761880-42761950)
chr8 (291-396)||(2376524-2376629)
chr8 (291-331)||(9524963-9525003)
chr8 (291-331)||(24608532-24608572)
chr8 (295-331)||(27822080-27822116)
chr8 (291-331)||(28465624-28465664)
chr8 (291-331)||(43847708-43847748)
chr8 (292-367)||(1032976-1033048)
chr8 (292-331)||(27558919-27558958)
chr8 (296-367)||(34073254-34073323)
chr8 (291-364)||(17980288-17980359)
chr8 (784-857)||(36477108-36477179)
chr8 (310-367)||(10310307-10310362)
chr8 (291-324)||(23766463-23766496)
chr8 (290-331)||(41089199-41089240)
[»] chr5 (18 HSPs)
chr5 (291-368)||(42801455-42801530)
chr5 (291-367)||(18478009-18478083)
chr5 (291-367)||(19059019-19059093)
chr5 (290-367)||(42455409-42455484)
chr5 (291-367)||(18872527-18872601)
chr5 (291-367)||(29096323-29096397)
chr5 (291-366)||(29841354-29841427)
chr5 (295-368)||(36888107-36888178)
chr5 (291-368)||(2411308-2411383)
chr5 (291-367)||(29106053-29106127)
chr5 (295-367)||(843383-843453)
chr5 (291-331)||(29050806-29050846)
chr5 (310-367)||(4674830-4674885)
chr5 (295-367)||(8015845-8015915)
chr5 (295-368)||(23925553-23925624)
chr5 (291-328)||(27440350-27440387)
chr5 (310-367)||(36045149-36045204)
chr5 (310-367)||(37303959-37304014)
[»] chr7 (25 HSPs)
chr7 (291-368)||(32814833-32814908)
chr7 (291-367)||(36315989-36316063)
chr7 (291-367)||(22047526-22047600)
chr7 (295-367)||(24396955-24397025)
chr7 (291-365)||(42887160-42887232)
chr7 (291-396)||(44437812-44437914)
chr7 (291-365)||(46716339-46716411)
chr7 (291-367)||(2261499-2261573)
chr7 (291-367)||(22965973-22966047)
chr7 (291-340)||(29778987-29779035)
chr7 (290-367)||(30644174-30644249)
chr7 (291-367)||(34948112-34948186)
chr7 (291-367)||(34961987-34962061)
chr7 (295-331)||(25818296-25818332)
chr7 (291-331)||(27047764-27047804)
chr7 (307-367)||(37449525-37449583)
chr7 (291-330)||(4590656-4590695)
chr7 (291-330)||(21086110-21086149)
chr7 (296-367)||(38792223-38792292)
chr7 (291-367)||(19126742-19126817)
chr7 (290-367)||(2366362-2366437)
chr7 (290-331)||(5787466-5787507)
chr7 (295-328)||(45198150-45198183)
chr7 (291-367)||(46337882-46337957)
chr7 (291-367)||(47552219-47552293)
[»] chr3 (26 HSPs)
chr3 (292-365)||(21420206-21420277)
chr3 (291-367)||(35483275-35483349)
chr3 (291-368)||(4478382-4478457)
chr3 (291-367)||(33206763-33206837)
chr3 (291-367)||(14417874-14417948)
chr3 (295-367)||(49146094-49146164)
chr3 (291-396)||(24751247-24751349)
chr3 (310-367)||(3955331-3955388)
chr3 (295-368)||(23820639-23820710)
chr3 (290-365)||(13539981-13540054)
chr3 (291-331)||(20244140-20244180)
chr3 (291-367)||(27066616-27066690)
chr3 (295-367)||(32508809-32508879)
chr3 (300-368)||(37059462-37059528)
chr3 (291-331)||(43566845-43566885)
chr3 (291-330)||(35849329-35849368)
chr3 (291-329)||(8958369-8958407)
chr3 (291-329)||(34503221-34503259)
chr3 (310-367)||(362968-363023)
chr3 (299-368)||(13616088-13616155)
chr3 (290-367)||(28962969-28963044)
chr3 (291-367)||(34344793-34344866)
chr3 (310-367)||(36331741-36331796)
chr3 (291-367)||(49639034-49639108)
chr3 (291-328)||(51399956-51399993)
chr3 (291-324)||(54983765-54983798)
[»] chr2 (26 HSPs)
chr2 (291-396)||(24034039-24034142)
chr2 (291-368)||(32891287-32891362)
chr2 (292-396)||(36520763-36520868)
chr2 (291-367)||(580798-580872)
chr2 (291-367)||(30474210-30474284)
chr2 (291-331)||(25050289-25050329)
chr2 (291-341)||(10207651-10207700)
chr2 (291-368)||(9791909-9791984)
chr2 (291-368)||(17239907-17239982)
chr2 (291-367)||(22297467-22297541)
chr2 (295-367)||(10262749-10262819)
chr2 (295-367)||(41699112-41699182)
chr2 (291-365)||(16973914-16973986)
chr2 (290-368)||(36665435-36665511)
chr2 (300-367)||(44422122-44422187)
chr2 (291-368)||(9547141-9547216)
chr2 (310-368)||(9796922-9796978)
chr2 (291-368)||(20122489-20122564)
chr2 (310-368)||(25731959-25732015)
chr2 (290-328)||(32943344-32943382)
chr2 (291-367)||(8234807-8234881)
chr2 (291-367)||(11133081-11133156)
chr2 (299-367)||(17154663-17154729)
chr2 (295-367)||(22538549-22538619)
chr2 (295-368)||(33001567-33001638)
chr2 (290-331)||(44721753-44721794)
[»] chr6 (16 HSPs)
chr6 (291-367)||(12089103-12089177)
chr6 (291-367)||(22389765-22389839)
chr6 (291-367)||(12127924-12127998)
chr6 (311-367)||(17305542-17305597)
chr6 (291-367)||(35190769-35190843)
chr6 (291-368)||(19417828-19417903)
chr6 (295-331)||(6025435-6025471)
chr6 (291-331)||(11982768-11982808)
chr6 (291-367)||(21507216-21507290)
chr6 (291-331)||(22501024-22501064)
chr6 (290-328)||(10377176-10377214)
chr6 (310-367)||(14981717-14981772)
chr6 (295-367)||(9438312-9438382)
chr6 (295-367)||(9491750-9491820)
chr6 (310-367)||(11636688-11636743)
chr6 (291-328)||(18244064-18244101)
[»] chr4 (31 HSPs)
chr4 (291-367)||(12856190-12856264)
chr4 (291-367)||(32885694-32885768)
chr4 (293-367)||(51077875-51077947)
chr4 (291-367)||(47017961-47018035)
chr4 (295-367)||(3465593-3465663)
chr4 (291-367)||(45350282-45350356)
chr4 (291-367)||(45359761-45359835)
chr4 (295-367)||(53291452-53291522)
chr4 (291-368)||(10098131-10098206)
chr4 (290-367)||(31601811-31601886)
chr4 (294-367)||(47416477-47416548)
chr4 (291-368)||(24234088-24234163)
chr4 (291-367)||(34773698-34773772)
chr4 (291-331)||(6053986-6054026)
chr4 (291-367)||(26253958-26254032)
chr4 (295-331)||(33944412-33944448)
chr4 (291-331)||(50657886-50657926)
chr4 (291-365)||(53697997-53698069)
chr4 (291-367)||(9692967-9693042)
chr4 (290-368)||(13211366-13211442)
chr4 (291-368)||(29269329-29269403)
chr4 (291-329)||(35031389-35031427)
chr4 (291-367)||(39992842-39992915)
chr4 (300-365)||(43327342-43327405)
chr4 (291-367)||(534779-534854)
chr4 (291-328)||(4722516-4722553)
chr4 (310-367)||(8690239-8690294)
chr4 (291-367)||(20753140-20753214)
chr4 (310-367)||(37032194-37032249)
chr4 (291-368)||(52608582-52608656)
chr4 (291-340)||(55266476-55266524)
[»] scaffold0191 (1 HSPs)
scaffold0191 (291-396)||(16853-16957)
[»] chr1 (30 HSPs)
chr1 (291-364)||(9408632-9408703)
chr1 (292-368)||(15368812-15368886)
chr1 (290-367)||(24014623-24014698)
chr1 (291-331)||(8261724-8261764)
chr1 (291-365)||(23930561-23930633)
chr1 (311-368)||(11238042-11238097)
chr1 (291-367)||(21884581-21884655)
chr1 (291-328)||(33059544-33059581)
chr1 (291-367)||(39433364-39433438)
chr1 (291-331)||(4354154-4354194)
chr1 (291-331)||(4429531-4429571)
chr1 (295-367)||(15774327-15774397)
chr1 (295-367)||(19793536-19793606)
chr1 (291-367)||(37733761-37733835)
chr1 (291-331)||(38019997-38020037)
chr1 (291-367)||(41833550-41833625)
chr1 (291-367)||(43837416-43837490)
chr1 (295-367)||(49251410-49251480)
chr1 (291-330)||(18923935-18923974)
chr1 (291-330)||(43555924-43555963)
chr1 (310-368)||(9527451-9527507)
chr1 (293-367)||(12553201-12553274)
chr1 (310-367)||(39238741-39238796)
chr1 (291-367)||(1721146-1721220)
chr1 (291-368)||(12866129-12866205)
chr1 (310-367)||(13870096-13870151)
chr1 (291-367)||(23464001-23464075)
chr1 (310-367)||(29491495-29491550)
chr1 (292-325)||(34560392-34560425)
chr1 (310-367)||(38021277-38021332)
[»] scaffold0039 (1 HSPs)
scaffold0039 (291-331)||(101837-101877)
[»] scaffold1990 (1 HSPs)
scaffold1990 (294-367)||(903-974)
[»] scaffold0809 (1 HSPs)
scaffold0809 (310-367)||(4821-4875)
[»] scaffold0092 (1 HSPs)
scaffold0092 (294-367)||(47332-47403)
[»] scaffold0008 (1 HSPs)
scaffold0008 (291-329)||(43747-43785)


Alignment Details
Target: chr8 (Bit Score: 505; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 271 - 928
Target Start/End: Complemental strand, 36467995 - 36467336
Alignment:
Q  271 tcatttatgtcgtccca--attatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||| ||| |||||||||||||    
T  36467995 tcatttatgtcgtcccgtgattatagctcagttggtatgacaatgcattattatatgcagggg-tcggagtttcgaactctgtacatcccacttattcat 36467897  T
Q  369 gtgaattctagccaataggctatctgacnnnnnnnn-ttaatttatatgnnnnnnngggatttctcatagattatctttaatataggtgatattattcaa 467  Q
    |||||||||||||| |||||| ||||||         ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  36467896 gtgaattctagccactaggctgtctgacaaaaaaaaattaatttatatgtttttttgggatttctcatagattatctttaatataggtgatattattcaa 36467797  T
Q  468 aacttgtcggacatcaaatatttcaattgagattcgaatattaattcactaagaccatacggaagcaccatctctctcttcattttgaatctcatttaaa 567  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||  ||||||||||     
T  36467796 aacgtgtcggacatcaaatatttcaattgagattcgaatattagttcactaagatcatatggaagcaccatctctctcttcattttgggtctcatttaat 36467697  T
Q  568 aaatcttaataaaattgatacttattaagtatgtggtgatatgaattcaatttaaacatctaatttaaggtgattgttgtggatggtctaaaatgtgaaa 667  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  36467696 aaatcttaataaaattgatacttattaagtatgtgatgatatgaattcaatttaaacatctaatttagggtgcttgttgtggatggtctaagatgtgaaa 36467597  T
Q  668 gtggtgactcattcctctatgccaatccccattgtttaatttgagtcatttatttgtatagagacaatatttattgagacaaggcataaagacaaaacat 767  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36467596 gtggtgactcattcctctatgccaatccccattgtttaatttgagtcatttatttgtatagagacaatatttattgagacaaggcatagagacaaaacat 36467497  T
Q  768 ttattgagatttcttcttttcttactcgaaacatttaccgagcggttatataacatttgatgtcaaagttttgaaaatctctacatgcattggtgtgatt 867  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36467496 ttattgagatttcttcttttcttactcaaaacatttaccgagcggttatataacatttgatgtcaaagttttgaaaatctctacatgcattggtgtgatt 36467397  T
Q  868 gtcttagtcttatcttgaaaactactcttgagctatcagtgtctacatttacatgatgatg 928  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36467396 gtcttagtcttatcttgaaaactactcttgagctatcagtgtctacatttacatgatgatg 36467336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 200
Target Start/End: Complemental strand, 36468222 - 36468054
Alignment:
Q  32 gtgttgaagaaggaagaacaagagtgatacaaatagcattttttcttgtcnnnnnnnnnnctagcattttttcgcttgacgtgagaagatttgaatggaa 131  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||| ||||    
T  36468222 gtgttgaagaaggaagaacaagagtgatacaactagcattttttcttgtcaaaaaaaaaactagcattttttcgcttgacgtgagaagatttgaaaggaa 36468123  T
Q  132 aatttgtcttttttgctattgagaagaagtgttttgtcttgtaggagattttctaatttaaacaagaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36468122 aatttgtcttttttgctattgagaagaagtgttttgtcttgtaggagattttctaatttaaacaagaaa 36468054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 4798631 - 4798556
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||| |||||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  4798631 tatagctcagttggtaggataatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 4798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 17987538 - 17987464
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||| || |||||||||| |||||||    
T  17987538 atagctcagttggtaggataatgcattattatatgca-ggggccggag-ttcgaaccccggacaccccaattattca 17987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 40329690 - 40329619
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| |||||||||||||||||||||  ||||||||| ||||||||  |||||||| |||||||||    
T  40329690 ctcagttggtaggataatgcattattatatgca-tgggtcggaggttcgaatctcggacaccctacttattca 40329619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 39484459 - 39484384
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | ||||||| | |||||||||||||||||||    
T  39484459 atagctcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaatgccggacaccccacttattcat 39484384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 5184976 - 5184902
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||| |||||||||||||||||  | | | |||||| |||||||||||||||||||||    
T  5184976 atagctcagttggtaggacaatggattattatatgcagggg--ctggggttcgaaccctggacaccccacttattca 5184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 15042454 - 15042380
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  15042454 atagctcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 15042380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 23857413 - 23857337
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||| | |||||| |  |||||||| ||||||||||    
T  23857413 atagctcagttggtaggacaatgcattattatatgcagggggccgg-ggttcgaacctcggacacccgacttattcat 23857337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 10970272 - 10970312
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10970272 atagctcagttggtaggataatgcattattatatgcagggg 10970312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 42761950 - 42761880
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | ||||||  |||||||| |||||||||||    
T  42761950 ctcagttggtatgacaatgcattattatatgcaggggg-cgg-ggttcgaactctggacactccacttattca 42761880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 2376524 - 2376629
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca--tgtgaattctagccaataggc 388  Q
    |||| ||| |||||| || ||||||||||||||||||||||  |||   |||||| |  |||||| |||||||||||  ||||||||||||||| |||||    
T  2376524 atagttcaattggtaggacaatgcattattatatgcaggggtccggg--ttcgaacctcggacactccacttattcacctgtgaattctagccattaggc 2376621  T
Q  389 tatctgac 396  Q
    || |||||    
T  2376622 tacctgac 2376629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 9524963 - 9525003
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  9524963 atagctcagttggtaggacaatgcattattatatgcagggg 9525003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 24608572 - 24608532
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  24608572 atagctcagttggtaggacaatgcattattatatgcagggg 24608532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 27822080 - 27822116
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||| |||||||||||||||||||||||||    
T  27822080 ctcagttggtaggataatgcattattatatgcagggg 27822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 28465624 - 28465664
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  28465624 atagctcagttggtaggacaatgcattattatatgcagggg 28465664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 43847708 - 43847748
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  43847708 atagctcagttggtaggacaatgcattattatatgcagggg 43847748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 1033048 - 1032976
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||  || |||||||||||||||||| |||||||||| |||||| || | ||||||||||||||||    
T  1033048 tagctcagttggtgggacaatgcattattatatgca-ggggtcggag-ttcgaa-cccgaacaccccacttattca 1032976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 27558958 - 27558919
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  27558958 tagctcatttggtaggataatgcattattatatgcagggg 27558919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 34073323 - 34073254
Alignment:
Q  296 tcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||| ||||||||||||||||||| ||||| ||  || |||||| || ||||||||||||||||||    
T  34073323 tcagttggtaggataatgcattattatatgtagggg-tca-aggttcgaaccccggacaccccacttattca 34073254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 17980288 - 17980359
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttat 364  Q
    ||||||||||||||| || || |||||||||||||||||||  | | | |||||| || |||||||||||||||    
T  17980288 atagctcagttggtaggacaaagcattattatatgcagggg--ccggggttcgaaccccggacaccccacttat 17980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 784 - 857
Target Start/End: Complemental strand, 36477179 - 36477108
Alignment:
Q  784 ttttcttactcgaaacatttaccgagcggttatataacatttgatgtcaaagttttgaaaatctctacatgcat 857  Q
    |||||||||||  || ||||||||||| ||||| ||| ||||||||| || |||||||||||| | ||||||||    
T  36477179 ttttcttactc--aatatttaccgagcagttatttaatatttgatgtgaaggttttgaaaatccccacatgcat 36477108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 10310307 - 10310362
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| ||| || ||||||||| |||||| ||||||||||||||||||    
T  10310307 aatgcattattatatacagagg-tcggagttt-gaatcccggacaccccacttattca 10310362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 324
Target Start/End: Complemental strand, 23766496 - 23766463
Alignment:
Q  291 atagctcagttggtatgataatgcattattatat 324  Q
    |||| |||||||||||||||||||||||||||||    
T  23766496 atagttcagttggtatgataatgcattattatat 23766463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 41089240 - 41089199
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||| |||||||| || ||||||||||||||||||||||    
T  41089240 tatagcttagttggtaggacaatgcattattatatgcagggg 41089199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 1e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 42801530 - 42801455
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | |||||| || ||||||| |||||||||||    
T  42801530 atagctcagttggtatgataatgcattattatatgca-ggggtcgg-ggttcgaaccccggacacctcacttattcat 42801455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 18478009 - 18478083
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||| ||||  | | | |||||| |||||||||||||||||||||    
T  18478009 atagctcagttggtaggacaatgcattattatatgctgggg--ccggggttcgaaccctggacaccccacttattca 18478083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 19059093 - 19059019
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||| |||||||||||  | | | |||||| |||||||||||||||||||||    
T  19059093 atagctcagttggtaggacaatgcattatcatatgcagggg--ccggggttcgaaccctggacaccccacttattca 19059019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 42455484 - 42455409
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||| || |||||||||||||||||| |||| ||||| |||||| || |||||| |||||||||||    
T  42455484 tatagctcagttggtaggacaatgcattattatatgca-ggggccggag-ttcgaaccccggacactccacttattca 42455409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 18872527 - 18872601
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||||||| | |||||| || | ||||||||||||||||    
T  18872527 atagctcagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaaccccgaacaccccacttattca 18872601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 29096397 - 29096323
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||  ||| ||||| |||||| || ||||||||||||||||||    
T  29096397 atagctcagttggtaggacaatgcattattatatgca-agggccggag-ttcgaaccccggacaccccacttattca 29096323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 366
Target Start/End: Original strand, 29841354 - 29841427
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattc 366  Q
    ||||||||||||||| || |||||||||||||||||| |||  | ||| |||||| || |||||||||||||||||    
T  29841354 atagctcagttggtaggacaatgcattattatatgcaaggg--ccgagattcgaaccccggacaccccacttattc 29841427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 36888178 - 36888107
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||| || ||||||||||||||||||||||  | | | || |||||||||| |||||||||||||||    
T  36888178 ctcagttggtaggacaatgcattattatatgcagggg--ccggggttggaatcctggagaccccacttattcat 36888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 2411383 - 2411308
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || |||| ||||||||||||| |||| ||||| |||||| ||  ||||||||||||||||||    
T  2411383 atagctcagttggtaggacaatgtattattatatgca-ggggccggag-ttcgaaccccagacaccccacttattcat 2411308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 29106127 - 29106053
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| |||||| || ||||||||||||||||||||||  | ||  |||||| ||| |||||||||||||||||    
T  29106127 atagctcaattggtaggacaatgcattattatatgcagggg--ccgaagttcgaaccctagacaccccacttattca 29106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 843453 - 843383
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||| |||||||||||||||| | |||| ||| | |||||| || ||||||||||||||||||    
T  843453 ctcagttggtatgacaatgcattattatatgta-ggggacgg-ggttcgaaccccggacaccccacttattca 843383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 29050806 - 29050846
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  29050806 atagctcagttggtaggacaatgcattattatatgcagggg 29050846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 4674885 - 4674830
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  4674885 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 4674830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 8015845 - 8015915
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||| |||| ||||||||||||||| |||||||||  | | | |||||| || ||||||||||||||||||    
T  8015845 ctcagtcggtaggataatgcattattacatgcagggg--ccggggttcgaaccccggacaccccacttattca 8015915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 23925553 - 23925624
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||| || || |||||||||||||||||| |||||| | | ||||||||| ||| |||||||||||||||    
T  23925553 ctcagttgataggacaatgcattattatatgca-ggggtctg-ggttcgaatcccggataccccacttattcat 23925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 27440387 - 27440350
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||||||| || |||||||||||||||||||    
T  27440387 atagctcagttggtaggacaatgcattattatatgcag 27440350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 36045204 - 36045149
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  36045204 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 36045149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 37303959 - 37304014
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||||||||||||||||| |||| ||| |||| |||||||||||||||||||||    
T  37303959 aatgtattattatatgcagggg-tcggggtt-cgaaccctggacaccccacttattca 37304014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 32814833 - 32814908
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| |   ||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  32814833 atagctcagttggtagggacatgcattattatatgca-ggggtcggag-ttcgaatcccggacaccccacttattcat 32814908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 36316063 - 36315989
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| |||||||||||||||||||||||||  | | | |||||| |  ||||||||||||||||||    
T  36316063 atagctcagttggtaggataatgcattattatatgcagggg--ccggggttcgaacctcggacaccccacttattca 36315989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 22047526 - 22047600
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||||    | ||||||| ||||||||||||||||||||    
T  22047526 atagctcagttggtaggacaatgcattattatatgcagggggt-tatggttcgaat-ctggacaccccacttattca 22047600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 24396955 - 24397025
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||| | || |||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||    
T  24396955 ctcagttggcaggacaatgcattattatatgca-ggggtcggag-ttcgaaccctggacaccctacttattca 24397025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 42887160 - 42887232
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    ||||||||||||||| || ||| ||||||||||||||||||  | ||| |||||| || ||||||||||||||||    
T  42887160 atagctcagttggtacgacaattcattattatatgcagggg--ctgaggttcgaaccccggacaccccacttatt 42887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 44437914 - 44437812
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcatgtgaattctagccaataggcta 390  Q
    ||||||||||| ||| || ||||||||||||||||||||||  | | | |||||| || |||||||||||||| | |  ||||||||||||| |||||||    
T  44437914 atagctcagttagtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccactta-taagatgaattctagccactaggcta 44437818  T
Q  391 tctgac 396  Q
     |||||    
T  44437817 cctgac 44437812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 46716339 - 46716411
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    ||||||||||||||| || |||||||||||||||||| | |||||| | |||||| |||| ||||||||||||||    
T  46716339 atagctcagttggtaggacaatgcattattatatgca-gaggtcgg-ggttcgaaccctgaacaccccacttatt 46716411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 2261573 - 2261499
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| |||||| || ||||||||||||||||||||||  | | | ||||||||| |||||||| |||||||||    
T  2261573 atagctcaattggtaggacaatgcattattatatgcagggg--ccggggttcgaatcccggacacccaacttattca 2261499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 22966047 - 22965973
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| |||||| || ||||||||||||||||||||||  | ||| |||||| ||  |||||||||||||||||    
T  22966047 atagctcaattggtaggacaatgcattattatatgcagggg--ccgaggttcgaaccccagacaccccacttattca 22965973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 29778987 - 29779035
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtt 340  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  29778987 atagctcaattggtaggataatgcattattatatgca-ggggtcggagtt 29779035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 30644174 - 30644249
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||| || ||||||||||||||||||||||  ||| ||| |||| ||  |||||||||||||||||    
T  30644174 tatagctcagttggtaggacaatgcattattatatgcaggggc-cggtgtt-cgaaccccagacaccccacttattca 30644249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 34948112 - 34948186
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||| |||||||| ||  | ||| |||||| || ||||||||||||||||||    
T  34948112 atagctcagttggtaggacaatgcattatcatatgcagtgg--ccgaggttcgaaccccggacaccccacttattca 34948186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 34962061 - 34961987
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||||  | | |||  |||||| |||||||| ||||||||||||    
T  34962061 atagctcagttggtaggacaatgcattattatatgcagtagctggga--ttcgaaccctggacatcccacttattca 34961987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 25818296 - 25818332
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25818296 ctcagttggtaggataatgcattattatatgcagggg 25818332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 27047804 - 27047764
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  27047804 atagctcagttggtaggacaatgcattattatatgcagggg 27047764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 37449583 - 37449525
Alignment:
Q  307 gataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||| ||||||||||||| ||| | |||||| ||||||||||||    
T  37449583 gataatgcattattatatgca-ggggtcggagttt-gaaccttggacatcccacttattca 37449525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 4590695 - 4590656
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcaggg 330  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  4590695 atagctcagttggtaggacaatgcattattatatgcaggg 4590656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 21086110 - 21086149
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcaggg 330  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  21086110 atagctcagttggtaggacaatgcattattatatgcaggg 21086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 38792223 - 38792292
Alignment:
Q  296 tcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||| || |||||||||||||||||| |||||| |||||| ||| || |||||||| |||||||||    
T  38792223 tcagttggtaagacaatgcattattatatgca-ggggtcagagttt-gaaccccggacaccctacttattca 38792292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 19126742 - 19126817
Alignment:
Q  291 atagctcagttggtatgat-aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| ||  ||||||||||||||| |||||| |  ||| |||||| || ||||||||||||||||||    
T  19126742 atagctcagttggtaggaacaatgcattattatatacaggggct--gaggttcgaaccccggacaccccacttattca 19126817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 2366362 - 2366437
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| |||||||| || || |||||||||||||||||| |||||||| | ||||||  || |||||||||||||||||    
T  2366362 tataactcagttgataggacaatgcattattatatgca-ggggtcgg-ggttcgaactctagacaccccacttattca 2366437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 5787466 - 5787507
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  5787466 tatagctcaattggtaggacaatgcattattatatgcagggg 5787507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 328
Target Start/End: Complemental strand, 45198183 - 45198150
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||| ||||||||||||||||||||||    
T  45198183 ctcagttggtaggataatgcattattatatgcag 45198150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 46337957 - 46337882
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggaca-ccccacttattca 367  Q
    |||| |||||||||| || |||||||||||||||||| ||| |||| | |||||| |||||||| |||||||||||||    
T  46337957 atagttcagttggtaggacaatgcattattatatgca-gggatcgg-ggttcgaaccctggacacccccacttattca 46337882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 47552219 - 47552293
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||  | | | |||||| || |||||||| |||||||||    
T  47552219 atagctcagttggtaggacaatgcattattatatgcaaggg--ccggggttcgaaccccggacaccctacttattca 47552293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 21420277 - 21420206
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    |||||||||||||| || |||||||||||||||||| | |||| ||| ||||||||||||||||||||||||||    
T  21420277 tagctcagttggtaggacaatgcattattatatgca-gcggtc-gaggttcgaatcctggacaccccacttatt 21420206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 35483275 - 35483349
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| ||| || |||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||    
T  35483275 atagctcagttagtaggacaatgcattattatatgca-ggggtcgg-ggttcgaatcccggacaccccacttattca 35483349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 4478457 - 4478382
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||| ||||||  ||||||||||||||||| |||||||| | ||||||||| ||||| |||||||||||||    
T  4478457 atagctcagttagtatgaacatgcattattatatgca-ggggtcgg-ggttcgaatcccggacatcccacttattcat 4478382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 33206763 - 33206837
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  33206763 atagctcagttggtaggacaatgcattattatatgcagggg--ctggggttcgaaccccggacaccccacttattca 33206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 14417874 - 14417948
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| |||||| || |||||||||||||||||||||| | |||| |||||| || ||||||||||||||||||    
T  14417874 atagctcaattggtaggacaatgcattattatatgcaggggct-ggag-ttcgaaccccggacaccccacttattca 14417948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 49146094 - 49146164
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  49146094 ctcagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 49146164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 24751349 - 24751247
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcatgtgaattctagccaataggcta 390  Q
    ||||||||||| ||| || ||||||||||||||||||||||  | | | |||||| || |||||||||||||| | |  ||||||||||||| |||||||    
T  24751349 atagctcagttagtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccactta-taagatgaattctagccactaggcta 24751253  T
Q  391 tctgac 396  Q
     |||||    
T  24751252 cctgac 24751247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 3955331 - 3955388
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||||| | | | |||||| || ||||||||||||||||||    
T  3955331 aatgcattattatatgcaggggggccggggttcgaaccccggacaccccacttattca 3955388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 23820639 - 23820710
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||| || |||||||||||||||||| |||| ||||| |||||| ||  ||||||||||||||||||    
T  23820639 ctcagttggtaggacaatgcattattatatgca-ggggccggag-ttcgaaccccagacaccccacttattcat 23820710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 13540054 - 13539981
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    |||||||||||||||| || |||||||||||||||| ||||| |  | | |||||| || ||||||||||||||||    
T  13540054 tatagctcagttggtaggacaatgcattattatatgtaggggtt--ggggttcgaaccccggacaccccacttatt 13539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 20244140 - 20244180
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  20244140 atagctcagttggtaggacaatgcattattatatgcagggg 20244180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 27066616 - 27066690
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| |||||  |||||||||||||| |||||| | | |||||| || ||||||||||||||||||    
T  27066616 atagctcagttggtaagataaatcattattatatgca-ggggtcag-ggttcgaaccccggacaccccacttattca 27066690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 32508879 - 32508809
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| || ||||||||||||||||||||| |||||||| | |||||| || | ||||||||||||||||    
T  32508879 ctcagttgataggataatgcattattatatgca-ggggtcgg-ggttcgaaccccgaacaccccacttattca 32508809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 37059462 - 37059528
Alignment:
Q  300 ttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||| ||||||||||||||||||||||||| | |||| ||||||||| | ||||| |||||||||||    
T  37059462 ttggtaggataatgcattattatatgcaggggct-ggag-ttcgaatcccgaacacctcacttattcat 37059528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 43566885 - 43566845
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  43566885 atagctcagttggtaggacaatgcattattatatgcagggg 43566845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 35849368 - 35849329
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcaggg 330  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  35849368 atagctcagttggtaggacaatgcattattatatgcaggg 35849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 8958369 - 8958407
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagg 329  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  8958369 atagctcagttggtaggataatgcattactatatgcagg 8958407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 34503221 - 34503259
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagg 329  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  34503221 atagctcagttggtaggacaatgcattattatatgcagg 34503259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 362968 - 363023
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||||| |||||| || ||| ||||||||||||||    
T  362968 aatgcattattatatgca-ggggtcggag-ttcgaaccccggataccccacttattca 363023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 13616155 - 13616088
Alignment:
Q  299 gttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||| || |||||||||||||||| | |||||||||| |||||| |  |||||||||||||||||||    
T  13616155 gttggtaggacaatgcattattatatgta-ggggtcggag-ttcgaacctcggacaccccacttattcat 13616088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 28962969 - 28963044
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||||||||||| ||||||||||| |||||| || |||||||| | ||||||||| | ||| ||||||||||||    
T  28962969 tataactcagttggtaggataatgcattgttatataca-ggggtcgg-ggttcgaatcccgaacatcccacttattca 28963044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 34344866 - 34344793
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||| || || |||||||||||||||||| || | ||||||||  || || ||||||||||||||||||    
T  34344866 atagctcagttgataggacaatgcattattatatgca-ggtgccggagttt--aaccccggacaccccacttattca 34344793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 36331796 - 36331741
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  36331796 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 36331741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 49639034 - 49639108
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||| |||||  | | | |||||| || | ||||||||||||||||    
T  49639034 atagctcagttggtaggacaatgcattattatatgtagggg--ccggggttcgaaccccgaacaccccacttattca 49639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 51399956 - 51399993
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  51399956 atagctcagttggtaggatattgcattattatatgcag 51399993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 324
Target Start/End: Complemental strand, 54983798 - 54983765
Alignment:
Q  291 atagctcagttggtatgataatgcattattatat 324  Q
    ||||||||||||||| ||||||||||||||||||    
T  54983798 atagctcagttggtaggataatgcattattatat 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 24034142 - 24034039
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcatgtgaattctagccaataggcta 390  Q
    |||||| |||||||| || |||||||||||||||||| |||||||| | |||||| |  |||||| ||||||||||| |||||||||||||| ||| |||    
T  24034142 atagcttagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaacctcggacactccacttattcacgtgaattctagccactagacta 24034045  T
Q  391 tctgac 396  Q
     |||||    
T  24034044 cctgac 24034039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 32891287 - 32891362
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||  ||||||| || |||||||||||||||||||    
T  32891287 atagctcagttggtaggacaatgcattattatatgca-ggggtcgg-ttttcgaaccccggacaccccacttattcat 32891362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 36520868 - 36520763
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt---catgtgaattctagccaataggc 388  Q
    |||||||||||||| || |||||||||||||||| | |||||||| | |||||| || ||||||||||||||||   || |||||||||||||| |||||    
T  36520868 tagctcagttggtaggacaatgcattattatatgta-ggggtcgg-ggttcgaaccccggacaccccacttattcaccaggtgaattctagccattaggc 36520771  T
Q  389 tatctgac 396  Q
    || |||||    
T  36520770 tacctgac 36520763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 580872 - 580798
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  580872 atagctcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 580798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 30474284 - 30474210
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | ||| |||||| ||  |||||||||||||||||    
T  30474284 atagctcagttggtaggacaatgcattattatatgcagggg--ccgaggttcgaaccccagacaccccacttattca 30474210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 25050329 - 25050289
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25050329 atagctcagttggtaggataatgcattattatatgcagggg 25050289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 10207651 - 10207700
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagttt 341  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  10207651 atagctcagttggtaggataatgcattattatatgca-gtggtcggagttt 10207700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 9791984 - 9791909
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||| |||||||||| || |||||||||||||||| ||| | |||| ||| ||||| |||||||||||||||||||||    
T  9791984 atagttcagttggtaggacaatgcattattatatgtaggtg-tcggggtt-cgaattctggacaccccacttattcat 9791909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 17239907 - 17239982
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||||||  | |||||||||||||||||| |||||||| | |||||| |  |||||||||||||||||||    
T  17239907 atagctcagttggtagaacaatgcattattatatgca-ggggtcgg-gattcgaacctcggacaccccacttattcat 17239982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 22297541 - 22297467
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | |||||| || |||||||||| |||||||    
T  22297541 atagctcagttggtaggacaatgcattattatatgcagggg--caggggttcgaaccccggacaccccatttattca 22297467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 10262749 - 10262819
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||| |||||||| | |||||| ||  |||||||||||||||||    
T  10262749 ctcagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaaccccagacaccccacttattca 10262819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 41699112 - 41699182
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| |||| |||||||||||||||| |||||||| | |||||| || | ||||||||||||||||    
T  41699112 ctcagttggtaggatattgcattattatatgca-ggggtcgg-ggttcgaaccccgaacaccccacttattca 41699182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 16973914 - 16973986
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    ||||||||||| ||| || |||| ||||||||||||||||| | |||  |||||| || ||||||||||||||||    
T  16973914 atagctcagtttgtaggacaatggattattatatgcaggggttagga--ttcgaaccccggacaccccacttatt 16973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 36665435 - 36665511
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||| ||| || ||||||||||||||||||||||  | | | |||||| |  |||||||||||||||||||    
T  36665435 tatagctcagtttgtaggacaatgcattattatatgcagggg--ccggggttcgaacctcggacaccccacttattcat 36665511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 44422122 - 44422187
Alignment:
Q  300 ttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||| || |||||||||||||||||| ||| |||||| |||||| || ||||||||||||||||||    
T  44422122 ttggtaggacaatgcattattatatgca-gggatcggag-ttcgaaccccggacaccccacttattca 44422187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 9547216 - 9547141
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||| || || |||| |||||||||||||||||  | | | ||||||||| | |||||||||||||||||    
T  9547216 atagctcagttgataggacaatgtattattatatgcagggg--ccggggttcgaatcccgaacaccccacttattcat 9547141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 9796922 - 9796978
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||||||||| |||||||| | |||||| || |||||||||||||||||||    
T  9796922 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattcat 9796978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 20122564 - 20122489
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || |||||||||||||||| |||||  | | | |||||| || |||||| ||||||||||||    
T  20122564 atagctcagttggtaggacaatgcattattatatgtagggg--ccggggttcgaaccccggacacgccacttattcat 20122489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 25731959 - 25732015
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||||||||| |||||||||| |||||| |  |||||||||||||||||||    
T  25731959 aatgcattattatatgca-ggggtcggag-ttcgaacctcggacaccccacttattcat 25732015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 290 - 328
Target Start/End: Original strand, 32943344 - 32943382
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcag 328  Q
    |||||||||||||||| || |||||||||||||||||||    
T  32943344 tatagctcagttggtaggacaatgcattattatatgcag 32943382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 8234881 - 8234807
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||| |||||||||||| |||||  | | | |||||| || ||||||||||||||||||    
T  8234881 atagctcagttggtaggacaatacattattatatgtagggg--ccggggttcgaaccccggacaccccacttattca 8234807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 11133081 - 11133156
Alignment:
Q  291 atagctcagttggtatg-ataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| | | |||||||| ||||||||||||| |||| ||| |||| || ||||||||||||||||||    
T  11133081 atagctcagttggtagggacaatgcattgttatatgcagggg-tcggggtt-cgaaccccggacaccccacttattca 11133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 17154663 - 17154729
Alignment:
Q  299 gttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  17154663 gttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 17154729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 22538549 - 22538619
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||||||| |  | | ||||||||| | ||||| ||||||||||    
T  22538549 ctcagttggtaggacaatgcattattatatgcaggggtt--ggggttcgaatcccgaacacctcacttattca 22538619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 33001638 - 33001567
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||| || ||||| |||||||||||| |||  ||| |||| |||||| |||||||||||||||||||    
T  33001638 ctcagttggtaggacaatgcgttattatatgcaagggc-cggggttt-gaatcccggacaccccacttattcat 33001567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 44721794 - 44721753
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  44721794 tatagctcagttggtagaacaatgcattattatatgcagggg 44721753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 12089103 - 12089177
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||| ||||| |||||| || ||||||||||||||||||    
T  12089103 atagctcagttggtaggacaatgcattattatatgca-ggggccggag-ttcgaaccccggacaccccacttattca 12089177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 22389839 - 22389765
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||||| | | ||||||||| ||||||||||||||||||    
T  22389839 atagctcagttggtaggacaatgcattattatatgca-ggggtcag-ggttcgaatcccggacaccccacttattca 22389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 12127998 - 12127924
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||||||||  |||||| || |||||| |||||||||||    
T  12127998 atagctcagttggtaggacaatgcattattatatgca-ggggtcgga-attcgaaccccggacacgccacttattca 12127924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 17305542 - 17305597
Alignment:
Q  311 atgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||    
T  17305542 atgcattattatatgcagggggcaggggtt-cgaatcctggacaccccacttattca 17305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 35190769 - 35190843
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||| |||||| || | ||||||||||||||||    
T  35190769 atagctcagttggtagaacaatgcattattatatgca-ggggtcggag-ttcgaaccccgaacaccccacttattca 35190843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 19417828 - 19417903
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||| |||| | |||||||||  ||||||||||||||||||    
T  19417828 atagctctgttggtaggataatgtattattatatgca-gggatcgg-gattcgaatcccagacaccccacttattcat 19417903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 6025471 - 6025435
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6025471 ctcagttggtaggataatgcattattatatgcagggg 6025435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 11982768 - 11982808
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  11982768 atagctcagttggtagaataatgcattattatatgcagggg 11982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 21507290 - 21507216
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||| |||||||| || |||| ||||||||||||| ||||||||||||| |||  | ||||||||||||||||||    
T  21507290 atagcttagttggtaggacaatgtattattatatgca-ggggtcggagttt-gaactccggacaccccacttattca 21507216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 22501024 - 22501064
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  22501024 atagctcagttggtaggacaatgcattattatatgcagggg 22501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 10377214 - 10377176
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcag 328  Q
    |||||||||||||||| || |||||||||||||||||||    
T  10377214 tatagctcagttggtaggacaatgcattattatatgcag 10377176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 14981772 - 14981717
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||||  | | | |||||| |||||||||||||||||||||    
T  14981772 aatgcattattatatgcagggg--ccggggttcgaaccctggacaccccacttattca 14981717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 9438312 - 9438382
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||||||| |  | | |||||| || |||||||||||| |||||    
T  9438312 ctcagttggtaggacaatgcattattatatgcaggggtt--ggggttcgaaccccggacaccccactcattca 9438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 9491820 - 9491750
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||| |||||  | | | |||||| || ||||||||||||||||||    
T  9491820 ctcagttggtaggacaatgcattattatatgtagggg--ccggggttcgaaccccggacaccccacttattca 9491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 11636688 - 11636743
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||||| |||||| || ||||||||||||| ||||    
T  11636688 aatgcattattatatgca-ggggtcggag-ttcgaaccccggacaccccactttttca 11636743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 18244101 - 18244064
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||||||| || |||||||||||||||||||    
T  18244101 atagctcagttggtaggacaatgcattattatatgcag 18244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 12856190 - 12856264
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| ||||||||| ||||||||| | |||||||||| |||||| || ||||||||||||||||||    
T  12856190 atagctcagttggtaggataatgcactattatatg-aaggggtcggag-ttcgaaccccggacaccccacttattca 12856264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 32885694 - 32885768
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| |||||||||| |||||| |  ||||||||||||||||||    
T  32885694 atagctcagttggtaggacaatgcattattatatgca-ggggtcggag-ttcgaacctcggacaccccacttattca 32885768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 51077875 - 51077947
Alignment:
Q  293 agctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| ||||||||  | ||||||||||||||||    
T  51077875 agctcagttggtaggacaatgcattattatatgca-ggggtcggag-ttcgaatctcgaacaccccacttattca 51077947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 47018035 - 47017961
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  47018035 atagctcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 47017961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 3465593 - 3465663
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||| |||| ||||| |||||| || ||||||||||||||||||    
T  3465593 ctcagttggtaggacaatgcattattatatgca-ggggccggag-ttcgaaccccggacaccccacttattca 3465663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 45350282 - 45350356
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || | |||||||||||||||| | |||||||| |||||| || ||||||||||||||||||    
T  45350282 atagctcagttggtaggacagtgcattattatatgca-gaggtcggag-ttcgaaccccggacaccccacttattca 45350356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 45359761 - 45359835
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || | |||||||||||||||| | |||||||| |||||| || ||||||||||||||||||    
T  45359761 atagctcagttggtaggacagtgcattattatatgca-gaggtcggag-ttcgaaccccggacaccccacttattca 45359835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 53291452 - 53291522
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| |||||||||||||||||||||  |||||||| ||| |||||| |||||||| |||||||||    
T  53291452 ctcagttggtaggataatgcattattatatgca-tgggtcggaattt-gaatcccggacacccaacttattca 53291522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 10098131 - 10098206
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||| ||||| || ||||||||||||||||||||||  | | | |||||| || |||||||||||||||||||    
T  10098131 atagctcagctggtaggacaatgcattattatatgcagggg--ccgggattcgaaccccggacaccccacttattcat 10098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 31601811 - 31601886
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||  | |||| |||||||||||||||||  | ||| |||||| || ||||||||||||||||||    
T  31601811 tatagctcagttggtagaacaatgtattattatatgcagggg--ccgagattcgaaccccggacaccccacttattca 31601886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 47416477 - 47416548
Alignment:
Q  294 gctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||| ||||||| ||||||||||||||||| |  | | ||||||||  ||||||||||||||||||    
T  47416477 gctcagttggtaggataatggattattatatgcaggggtt--ggggttcgaatctcggacaccccacttattca 47416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 24234163 - 24234088
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| |  |||||||||||||||||| |||| ||| |||| ||| || |||||||||||||||||||    
T  24234163 atagctcagttggtaggtcaatgcattattatatgca-ggggccggggttt-gaaccccggacaccccacttattcat 24234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 34773772 - 34773698
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||||||| || || ||||||||||||||||||||||  | ||| |||||| || ||||||||||||||||||    
T  34773772 atagttcagttgataggacaatgcattattatatgcagggg--ctgaggttcgaaccccggacaccccacttattca 34773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 6053986 - 6054026
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  6053986 atagctcagttggtaggacaatgcattattatatgcagggg 6054026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 26253958 - 26254032
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||||||||||  | |||| ||||||||||||| |||||||||| ||||||||| |||||| |||||||||||    
T  26253958 atagttcagttggtagaacaatgtattattatatgca-ggggtcggag-ttcgaatcccggacactccacttattca 26254032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 33944448 - 33944412
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33944448 ctcagttggtaggataatgcattattatatgcagggg 33944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 50657886 - 50657926
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  50657886 atagctcagttggtaggacaatgcattattatatgcagggg 50657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 53698069 - 53697997
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    |||||||||||| || || ||||||||||||||||||||||  | | | |||||| || ||||||||||||||||    
T  53698069 atagctcagttgttaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttatt 53697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 9692967 - 9693042
Alignment:
Q  291 atagctcagttggtatg-ataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||| | | ||||||||||||||||||||||||  | | | |||||| || ||||||||||||||||||    
T  9692967 atagctcagttggcagggataatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattca 9693042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 13211442 - 13211366
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||| |||||||||| || ||||||||||||||||||  ||||||| | |||||| || |||||| ||||||||||||    
T  13211442 tatagttcagttggtaggacaatgcattattatatgca-tgggtcgg-ggttcgaaccccggacactccacttattcat 13211366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 29269403 - 29269329
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||  || |||||||||||||||| ||||| | |||  |||||| || |||||||||||||||||||    
T  29269403 atagctcagttggtg-gacaatgcattattatatgtaggggctggga--ttcgaaccccggacaccccacttattcat 29269329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 35031389 - 35031427
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagg 329  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  35031389 atagctcagttggtaggacaatgcattattatatgcagg 35031427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 39992842 - 39992915
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||  || || ||||||||| |||||||||||| | ||   ||||||| ||||||||||||||||||||    
T  39992842 atagctcagttattaggacaatgcattaatatatgcaggggctggg---ttcgaattctggacaccccacttattca 39992915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 43327405 - 43327342
Alignment:
Q  300 ttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    |||||| ||||||||||||||||||||||||||| |  | |||||| || | ||||||||||||||    
T  43327405 ttggtaggataatgcattattatatgcagggggttg--ggttcgaaccccgcacaccccacttatt 43327342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 534854 - 534779
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggaca-ccccacttattca 367  Q
    |||||||| |||||| || ||||||| |||||||||| |||||||| |||| |||||| ||||| |||||||||||||    
T  534854 atagctcaattggtaggacaatgcatcattatatgca-ggggtcggggttt-gaatcccggacacccccacttattca 534779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 4722553 - 4722516
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||||||| || |||||||||||||||||||    
T  4722553 atagctcagttggtaggacaatgcattattatatgcag 4722516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 8690239 - 8690294
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  8690239 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 8690294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 20753214 - 20753140
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||| |||||  | | | |||||| || ||||||| ||||||||||    
T  20753214 atagctcagttggtaggaaaatgcattattatatgtagggg--ccggggttcgaaccccggacaccacacttattca 20753140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 37032249 - 37032194
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  37032249 aatgcattattatatgca-ggggtcgg-gattcgaaccccggacaccccacttattca 37032194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 52608656 - 52608582
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||| || ||||||||||||||||||  || |||||| |||||| || ||||| |||||||||||||    
T  52608656 atagctcagttggtaggacaatgcattattatatgca-tggatcggag-ttcgaaccccggaca-cccacttattcat 52608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 55266524 - 55266476
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtt 340  Q
    |||||||||||||||  | |||||||||||||||||| ||||||||||||    
T  55266524 atagctcagttggtagaacaatgcattattatatgca-ggggtcggagtt 55266476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 16853 - 16957
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca--tgtgaattctagccaataggc 388  Q
    ||||||||||||||| || |||||||||||||||||| |||||||  | |||||| || | |||||| |||||||||  | ||||||||||||| |||||    
T  16853 atagctcagttggtaggacaatgcattattatatgca-ggggtcg--ggttcgaaccccgaacaccctacttattcacctttgaattctagccactaggc 16949  T
Q  389 tatctgac 396  Q
    || |||||    
T  16950 tacctgac 16957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000006; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 9408703 - 9408632
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttat 364  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||||| ||||||||| ||||| |||||||||    
T  9408703 atagctcagttggtaggacaatgcattattaaatgca-ggggtcggag-ttcgaatcccggacaacccacttat 9408632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 292 - 368
Target Start/End: Original strand, 15368812 - 15368886
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||||||||| || ||||||||||||||||||||||  | | | |||||| || |||||||||||||||||||    
T  15368812 tagctcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttattcat 15368886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 24014698 - 24014623
Alignment:
Q  290 tatagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||| || |||||||||||||||||| |||| ||||| ||||||  |||||||||||| |||||||    
T  24014698 tatagctcagttggtaagacaatgcattattatatgca-ggggccggag-ttcgaactctggacaccccaattattca 24014623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 8261764 - 8261724
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8261764 atagctcagttggtaggataatgcattattatatgcagggg 8261724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 23930633 - 23930561
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttatt 365  Q
    |||| |||||||||| || |||||||||||||||||| |||||||| | |||||| ||||||||||||| |||||    
T  23930633 atagttcagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaaccctggacaccccatttatt 23930561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 11238097 - 11238042
Alignment:
Q  311 atgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    ||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||    
T  11238097 atgcattattatatgcagggg-tcggggtt-cgaatcccggacaccccacttattcat 11238042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 21884581 - 21884655
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||| |||||| || ||||||||||||||||||||||  | ||| |||||| ||  |||||||||||||||||    
T  21884581 atagctcaattggtaggacaatgcattattatatgcagggg--ccgaggttcgaaccccagacaccccacttattca 21884655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 33059581 - 33059544
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcag 328  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  33059581 atagctcagttggtaggataatgcattattatatgcag 33059544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 39433364 - 39433438
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||||||||||||| ||||||||||||||||||||||  | ||  |||||| |  ||||||||||||||||||    
T  39433364 atagttcagttggtatgaaaatgcattattatatgcagggg--ccgatgttcgaacctcggacaccccacttattca 39433438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 4354194 - 4354154
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  4354194 atagctcagttggtaggacaatgcattattatatgcagggg 4354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 4429571 - 4429531
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  4429571 atagctcagttggtaggacaatgcattattatatgcagggg 4429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 15774397 - 15774327
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||| | |||||||| | |||||| || ||||||||||||||||||    
T  15774397 ctcagttggtaggacaatgcattattatatgta-ggggtcgg-ggttcgaaccccggacaccccacttattca 15774327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 19793536 - 19793606
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||| |||| ||||  |||||| || ||||||||||||||||||    
T  19793536 ctcagttggtaggacaatgcattattatatgca-ggggccgga-attcgaaccccggacaccccacttattca 19793606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 37733761 - 37733835
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||||||||||||| | || ||| | |||||| || ||||||||||||||||||    
T  37733761 atagctcagttggtaggacaatgcattattatatgca-gtggacgg-ggttcgaaccccggacaccccacttattca 37733835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 38020037 - 38019997
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  38020037 atagctcagttggtaggacaatgcattattatatgcagggg 38019997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 41833625 - 41833550
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| ||| ||||||||| |||||||||||||||| || ||||||| | |||||| || | ||||||||||||||||    
T  41833625 atagttcaattggtatgacaatgcattattatatgtagagggtcgg-ggttcgaaccccgaacaccccacttattca 41833550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 43837490 - 43837416
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| || |||||||| || |||||| |||||||| | |||||| ||||||||||||| |||||||    
T  43837490 atagctcagttggtaggaaaatgcattcttctatgca-ggggtcgg-ggttcgaaccctggacaccccatttattca 43837416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 49251480 - 49251410
Alignment:
Q  295 ctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||| || |||||||||||||||||| |||||||| | |||||| ||  |||||||||||||||||    
T  49251480 ctcagttggtaggacaatgcattattatatgca-ggggtcgg-ggttcgaaccccagacaccccacttattca 49251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 18923974 - 18923935
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcaggg 330  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  18923974 atagctcagttggtaggacaatgcattattatatgcaggg 18923935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Complemental strand, 43555963 - 43555924
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcaggg 330  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  43555963 atagctcagttggtaggacaatgcattattatatgcaggg 43555924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 9527451 - 9527507
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||| ||||||||||||| |||| |||| ||| ||||||||||||||||||||||    
T  9527451 aatgcattgttatatgcagggg-tcggggttt-gaaccctggacaccccacttattcat 9527507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 12553201 - 12553274
Alignment:
Q  293 agctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||| ||  ||||||| ||||||||| |||| ||| | |||||| || ||||||||||||||||||    
T  12553201 agctcagttggtaggaacatgcattgttatatgca-ggggccgggggttcgaaccccggacaccccacttattca 12553274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 39238741 - 39238796
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||||  | ||| |||||| || ||||||||||||||||||    
T  39238741 aatgcattattatatgcagggg--ccgaggttcgaaccccggacaccccacttattca 39238796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Original strand, 1721146 - 1721220
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||| ||  ||||||| |||||||||||||  | | |||||||| || ||||||| ||||||||||    
T  1721146 atagctcagttggtaggaacatgcattgttatatgcagggg--ccgggtttcgaaccccggacacctcacttattca 1721220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 12866129 - 12866205
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattcat 368  Q
    |||||||  |||||| |||||||||||||||||||||| ||| ||| | |||||||||   |||||| ||||||||||    
T  12866129 atagctcgattggtaggataatgcattattatatgcagagggccgg-ggttcgaatcccacacaccctacttattcat 12866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 13870151 - 13870096
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||| ||| |||| |||||| ||||||||||||||||||    
T  13870151 aatgcattattatatgca-ggggccggggttt-gaatcccggacaccccacttattca 13870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 23464075 - 23464001
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||| |||||||||| || ||||||||||||||||||||||  | | | |||||| || ||||||||||||| ||||    
T  23464075 atagttcagttggtaggacaatgcattattatatgcagggg--ccggggttcgaaccccggacaccccacttgttca 23464001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 29491495 - 29491550
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||||||| | |||||| || ||||||||||||||||||    
T  29491495 aatgcattattatatgca-ggggtcgg-ggttcgaaccccggacaccccacttattca 29491550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 34560425 - 34560392
Alignment:
Q  292 tagctcagttggtatgataatgcattattatatg 325  Q
    |||||||||||||| |||||||||||||||||||    
T  34560425 tagctcagttggtaggataatgcattattatatg 34560392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 38021277 - 38021332
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    |||||||||||||||||| |||| ||||| |||||| || ||||||||||||||||||    
T  38021277 aatgcattattatatgca-ggggccggag-ttcgaaccccggacaccccacttattca 38021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 101837 - 101877
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagggg 331  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  101837 atagctcagctggtaggataatgcattattatatgcagggg 101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 903 - 974
Alignment:
Q  294 gctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||| |||||| || ||||||||||||||||||||||  | | | |||||||||  |||||||||||||||||    
T  903 gctcacttggtaggacaatgcattattatatgcagggg--ctggggttcgaatcccagacaccccacttattca 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 310 - 367
Target Start/End: Complemental strand, 4875 - 4821
Alignment:
Q  310 aatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||||||||||||||||||||  ||| ||| ||||||| ||||||||||||||||||    
T  4875 aatgcattattatatgcagggg--cggggtt-cgaatcccggacaccccacttattca 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 47403 - 47332
Alignment:
Q  294 gctcagttggtatgataatgcattattatatgcagggggtcggagtttcgaatcctggacaccccacttattca 367  Q
    ||||| |||||| || ||||||||||||||||||||||  | | | |||||||||  |||||||||||||||||    
T  47403 gctcacttggtaggacaatgcattattatatgcagggg--ctggggttcgaatcccagacaccccacttattca 47332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 43785 - 43747
Alignment:
Q  291 atagctcagttggtatgataatgcattattatatgcagg 329  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  43785 atagctcagttggtaggacaatgcattattatatgcagg 43747  T

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