View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2964_high_14 (Length: 530)
Name: NF2964_high_14
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2964_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 480; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 16 - 523
Target Start/End: Original strand, 41102211 - 41102718
Alignment:
| Q |
16 |
caagctactcccactatacacaaccaagaaacagcataatgataaatcattgttcttgtcgttggatatttgccccattttcttgtcttcacggtaaacc |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41102211 |
caagctactcccactatacacaaccaagaaacagcatattgataaatcattgttcttgtcgttggatatttgccccattttcttgtcttcacggttaacc |
41102310 |
T |
|
| Q |
116 |
aaaatactttaaaaacaaatcacaaagtgggccccattattgccggcaggtcctccaacttcaagaatcattgaccccatcgggtccacgcaaaatttcg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
41102311 |
aaaatactttaaaaacaaatcacaaagtgggccccattattgccggcaggtcctccaacttcaagaatctttgaccccatcgggtccacgcaaaatttcg |
41102410 |
T |
|
| Q |
216 |
gatagatactccttcaaatcttcgggcgaatatcttatcaccgagtccaacccgacccgaaatctcacataaaattccctatacttaaaaacaatcttcg |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
41102411 |
gatagatactccttcaaatcttcgggcgaatatcttatcaccgagtccaacccgacccgaaacttcacataaaattccctatacttaaaaacaatcttcg |
41102510 |
T |
|
| Q |
316 |
aaaccaacgactctttaatttcatttcgcagttccaggtcgggtacaacccacaaatattgcattctaaacgcttcatcgaattccacattgaaaccctg |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41102511 |
aaaccaacgactctttaatttcatttcgcagttccaggtcgggtacaacccacaaatattgcattctaaacgcttcatcgaattccacattgaaaccctg |
41102610 |
T |
|
| Q |
416 |
aaaaatttcgcttgctttctccaccgttggatttaccggaatcgacgatagaaccttactccacgccatgcgttcgtacttcgtaacatactctttaacc |
515 |
Q |
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|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41102611 |
aaaattttcgcttgctttctccaccgttggattttccggaatcgacgatagaaccttactccacgccatgcgttcgtacttcgtaacatactctttaacc |
41102710 |
T |
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| Q |
516 |
ttcatttc |
523 |
Q |
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|||||||| |
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| T |
41102711 |
ttcatttc |
41102718 |
T |
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