View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2964_high_45 (Length: 347)

Name: NF2964_high_45
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2964_high_45
NF2964_high_45
[»] chr8 (27 HSPs)
chr8 (128-331)||(12308459-12308658)
chr8 (11-128)||(43851665-43851782)
chr8 (14-131)||(10108367-10108485)
chr8 (14-128)||(14820295-14820409)
chr8 (15-131)||(21147933-21148051)
chr8 (15-132)||(10108634-10108752)
chr8 (17-130)||(30789773-30789887)
chr8 (11-131)||(7689783-7689904)
chr8 (15-131)||(14820558-14820675)
chr8 (15-129)||(5554868-5554983)
chr8 (11-129)||(10171403-10171522)
chr8 (72-130)||(21148258-21148316)
chr8 (11-60)||(26136945-26136994)
chr8 (11-120)||(42112993-42113102)
chr8 (17-129)||(42606019-42606132)
chr8 (11-117)||(30789519-30789625)
chr8 (14-60)||(42605822-42605868)
chr8 (14-63)||(2583386-2583435)
chr8 (11-129)||(2583580-2583700)
chr8 (15-129)||(14767505-14767621)
chr8 (15-63)||(5555133-5555181)
chr8 (76-128)||(18044153-18044205)
chr8 (11-63)||(22494644-22494696)
chr8 (72-130)||(42113303-42113361)
chr8 (72-130)||(43481637-43481695)
chr8 (89-129)||(7689523-7689563)
chr8 (11-63)||(26532849-26532901)
[»] chr7 (35 HSPs)
chr7 (11-129)||(23704921-23705039)
chr7 (11-132)||(28218174-28218297)
chr7 (14-129)||(48672542-48672658)
chr7 (14-128)||(20419799-20419915)
chr7 (14-129)||(28218426-28218542)
chr7 (11-129)||(20458691-20458809)
chr7 (11-128)||(16995200-16995317)
chr7 (14-130)||(41600221-41600338)
chr7 (11-129)||(12006540-12006658)
chr7 (14-128)||(23704662-23704776)
chr7 (11-128)||(20419536-20419654)
chr7 (11-132)||(10409634-10409755)
chr7 (17-134)||(20963760-20963877)
chr7 (14-63)||(25772594-25772643)
chr7 (14-129)||(12006803-12006919)
chr7 (14-129)||(20458954-20459069)
chr7 (14-129)||(23383763-23383879)
chr7 (11-63)||(38879790-38879842)
chr7 (14-62)||(38879987-38880035)
chr7 (11-63)||(44816901-44816953)
chr7 (11-130)||(25772362-25772481)
chr7 (89-131)||(33162875-33162917)
chr7 (15-63)||(10409440-10409488)
chr7 (11-63)||(20963561-20963613)
chr7 (11-63)||(24195056-24195108)
chr7 (76-128)||(24195198-24195250)
chr7 (72-127)||(7658287-7658342)
chr7 (11-62)||(41600025-41600076)
chr7 (74-128)||(23383499-23383553)
chr7 (14-63)||(1250469-1250518)
chr7 (15-63)||(24194929-24194978)
chr7 (89-130)||(31852169-31852210)
chr7 (88-128)||(38879723-38879763)
chr7 (11-63)||(48648327-48648379)
chr7 (11-63)||(48672345-48672397)
[»] chr1 (34 HSPs)
chr1 (11-130)||(39711332-39711452)
chr1 (14-132)||(18462282-18462400)
chr1 (11-129)||(33628689-33628808)
chr1 (11-130)||(34749136-34749255)
chr1 (11-130)||(8293067-8293188)
chr1 (14-132)||(24467625-24467743)
chr1 (11-130)||(4906960-4907080)
chr1 (15-130)||(17606572-17606686)
chr1 (14-128)||(39711074-39711187)
chr1 (14-130)||(52058271-52058388)
chr1 (22-129)||(29696564-29696671)
chr1 (11-130)||(29696818-29696937)
chr1 (14-128)||(34749368-34749483)
chr1 (11-63)||(18462544-18462596)
chr1 (11-63)||(24467887-24467939)
chr1 (17-128)||(39826312-39826424)
chr1 (11-128)||(30299491-30299609)
chr1 (11-128)||(52058011-52058129)
chr1 (14-63)||(4907225-4907274)
chr1 (72-129)||(20995697-20995754)
chr1 (11-63)||(39826116-39826168)
chr1 (15-128)||(39970909-39971024)
chr1 (15-130)||(20995932-20996047)
chr1 (11-129)||(30252158-30252279)
chr1 (14-131)||(33628953-33629071)
chr1 (11-63)||(17606374-17606426)
chr1 (11-63)||(39970712-39970764)
chr1 (11-50)||(33628846-33628885)
chr1 (11-62)||(42510081-42510132)
chr1 (72-125)||(17606307-17606360)
chr1 (11-128)||(18342279-18342395)
chr1 (18-63)||(30299297-30299342)
chr1 (11-51)||(34749293-34749333)
chr1 (11-51)||(48072143-48072183)
[»] chr3 (40 HSPs)
chr3 (14-128)||(19113028-19113143)
chr3 (11-132)||(9266971-9267093)
chr3 (14-136)||(30500304-30500426)
chr3 (15-128)||(14162135-14162248)
chr3 (17-129)||(14171852-14171965)
chr3 (14-129)||(33372405-33372521)
chr3 (14-129)||(9267238-9267353)
chr3 (11-129)||(35995677-35995796)
chr3 (18-132)||(45969911-45970026)
chr3 (15-132)||(16721987-16722105)
chr3 (11-129)||(43572651-43572769)
chr3 (18-129)||(49986526-49986639)
chr3 (11-128)||(4204709-4204826)
chr3 (14-130)||(14262299-14262416)
chr3 (11-63)||(21633156-21633208)
chr3 (18-130)||(47575539-47575651)
chr3 (14-128)||(5800605-5800720)
chr3 (15-129)||(16722255-16722370)
chr3 (72-138)||(27946187-27946253)
chr3 (16-129)||(33372669-33372783)
chr3 (11-132)||(14171583-14171704)
chr3 (15-131)||(14262033-14262150)
chr3 (15-129)||(19112763-19112879)
chr3 (14-63)||(20853959-20854008)
chr3 (15-131)||(30500040-30500155)
chr3 (14-62)||(43572456-43572504)
chr3 (11-131)||(20853692-20853814)
chr3 (14-128)||(45003496-45003611)
chr3 (14-132)||(52552951-52553070)
chr3 (15-128)||(5800869-5800982)
chr3 (17-130)||(11003730-11003844)
chr3 (19-130)||(45970183-45970296)
chr3 (15-129)||(15328724-15328840)
chr3 (15-132)||(35995942-35996057)
chr3 (72-128)||(19720333-19720389)
chr3 (15-63)||(52552758-52552806)
chr3 (89-131)||(21632898-21632940)
chr3 (11-129)||(45003756-45003874)
chr3 (14-63)||(14161937-14161986)
chr3 (72-129)||(49986850-49986907)
[»] chr5 (34 HSPs)
chr5 (11-132)||(14143898-14144019)
chr5 (11-129)||(17762542-17762661)
chr5 (11-128)||(23979161-23979279)
chr5 (14-131)||(17762280-17762397)
chr5 (11-131)||(30512285-30512405)
chr5 (11-131)||(30552625-30552745)
chr5 (11-130)||(6817121-6817240)
chr5 (11-129)||(14411926-14412044)
chr5 (14-127)||(4919253-4919366)
chr5 (14-127)||(41001616-41001729)
chr5 (15-129)||(14144165-14144280)
chr5 (11-129)||(24837168-24837287)
chr5 (14-128)||(24837432-24837547)
chr5 (15-128)||(31799640-31799754)
chr5 (11-129)||(4918988-4919108)
chr5 (17-130)||(20709478-20709591)
chr5 (15-123)||(7125923-7126031)
chr5 (14-129)||(14411696-14411812)
chr5 (14-129)||(24650962-24651078)
chr5 (14-124)||(29444810-29444921)
chr5 (15-128)||(18336720-18336833)
chr5 (11-132)||(993746-993865)
chr5 (14-129)||(7126180-7126296)
chr5 (14-63)||(994009-994058)
chr5 (15-132)||(27158987-27159104)
chr5 (11-63)||(20709278-20709330)
chr5 (14-129)||(24074302-24074418)
chr5 (15-63)||(29445070-29445118)
chr5 (11-62)||(22571144-22571195)
chr5 (14-63)||(18336534-18336583)
chr5 (89-126)||(24650704-24650741)
chr5 (11-60)||(41001422-41001471)
chr5 (18-62)||(6817388-6817432)
chr5 (15-63)||(24074566-24074614)
[»] chr6 (16 HSPs)
chr6 (14-131)||(32017767-32017884)
chr6 (11-130)||(18500313-18500432)
chr6 (11-128)||(26385278-26385396)
chr6 (14-129)||(24731934-24732053)
chr6 (14-128)||(9481182-9481297)
chr6 (14-63)||(19284195-19284244)
chr6 (11-131)||(24732198-24732318)
chr6 (15-63)||(9481446-9481494)
chr6 (76-132)||(30617963-30618019)
chr6 (11-63)||(33714553-33714605)
chr6 (11-62)||(9854147-9854198)
chr6 (76-129)||(18500655-18500708)
chr6 (72-125)||(26385596-26385649)
chr6 (72-132)||(2299336-2299396)
chr6 (19-63)||(9154946-9154990)
chr6 (14-62)||(30618029-30618077)
[»] chr4 (39 HSPs)
chr4 (11-128)||(3273880-3273996)
chr4 (11-127)||(34063983-34064100)
chr4 (11-129)||(9396959-9397077)
chr4 (18-127)||(35376164-35376273)
chr4 (11-130)||(9619239-9619359)
chr4 (18-130)||(37012974-37013086)
chr4 (14-125)||(38574231-38574343)
chr4 (14-128)||(9516873-9516988)
chr4 (11-129)||(38573968-38574086)
chr4 (14-126)||(9618982-9619095)
chr4 (11-132)||(35376388-35376509)
chr4 (14-130)||(46046687-46046803)
chr4 (11-130)||(12904745-12904864)
chr4 (14-125)||(3018014-3018127)
chr4 (14-120)||(15640724-15640830)
chr4 (14-60)||(31090324-31090370)
chr4 (11-127)||(9516611-9516728)
chr4 (72-129)||(31218303-31218360)
chr4 (11-63)||(31090127-31090179)
chr4 (15-63)||(37012773-37012821)
chr4 (73-132)||(41946961-41947020)
chr4 (15-132)||(48259819-48259938)
chr4 (15-129)||(3018276-3018389)
chr4 (14-60)||(26252337-26252383)
chr4 (11-128)||(26252497-26252615)
chr4 (14-63)||(7819080-7819129)
chr4 (11-59)||(7819274-7819322)
chr4 (11-63)||(15640975-15641027)
chr4 (15-63)||(34064246-34064294)
chr4 (72-128)||(43313533-43313589)
chr4 (11-126)||(48260011-48260126)
chr4 (15-129)||(13132205-13132318)
chr4 (18-129)||(31943949-31944061)
chr4 (72-130)||(36887678-36887736)
chr4 (11-129)||(46046429-46046542)
chr4 (14-59)||(3273692-3273737)
chr4 (14-63)||(48580129-48580178)
chr4 (88-132)||(18667628-18667672)
chr4 (15-63)||(18713224-18713272)
[»] chr2 (24 HSPs)
chr2 (14-132)||(19251467-19251585)
chr2 (11-129)||(26236355-26236473)
chr2 (11-128)||(15106327-15106443)
chr2 (14-132)||(17850849-17850968)
chr2 (11-128)||(23806212-23806330)
chr2 (11-131)||(17463351-17463472)
chr2 (11-128)||(17850587-17850704)
chr2 (14-63)||(26135883-26135932)
chr2 (14-129)||(26236126-26236242)
chr2 (14-129)||(20498746-20498860)
chr2 (11-129)||(19251730-19251848)
chr2 (15-129)||(26560555-26560668)
chr2 (14-128)||(15106067-15106182)
chr2 (11-129)||(20499005-20499124)
chr2 (15-128)||(22263192-22263305)
chr2 (14-130)||(22263454-22263573)
chr2 (20-128)||(23854688-23854797)
chr2 (11-60)||(30390528-30390577)
chr2 (11-45)||(13254696-13254730)
chr2 (11-60)||(17463160-17463209)
chr2 (83-128)||(23855027-23855072)
chr2 (11-59)||(13284668-13284716)
chr2 (76-128)||(26136143-26136195)
chr2 (72-128)||(42670717-42670773)
[»] scaffold0449 (2 HSPs)
scaffold0449 (18-132)||(7466-7582)
scaffold0449 (11-127)||(7227-7344)
[»] scaffold0361 (2 HSPs)
scaffold0361 (11-129)||(4823-4941)
scaffold0361 (14-130)||(4560-4678)
[»] scaffold0881 (3 HSPs)
scaffold0881 (11-63)||(286-338)
scaffold0881 (72-132)||(539-599)
scaffold0881 (11-50)||(376-415)
[»] scaffold0809 (2 HSPs)
scaffold0809 (14-130)||(1409-1525)
scaffold0809 (13-129)||(1672-1785)
[»] scaffold0117 (1 HSPs)
scaffold0117 (17-123)||(12248-12355)
[»] scaffold0141 (2 HSPs)
scaffold0141 (11-63)||(8582-8634)
scaffold0141 (75-129)||(8324-8378)
[»] scaffold0185 (1 HSPs)
scaffold0185 (11-129)||(3868-3987)
[»] scaffold0477 (1 HSPs)
scaffold0477 (11-62)||(5008-5059)


Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 12308459 - 12308658
Alignment:
Q  128 cttttgtaattgcgacagtttggttccttt-agaagcctactattgtgtaatttgagcacataagttagttttactaatctaggatgtgtgtttagaatt 226  Q
    ||||||||||||  |||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  12308459 cttttgtaattgtcacagtttggttccttttagaagccta---ttgtgtaatttgagcacataagttagttttagtaatctaggatgtgtgtttagaa-t 12308554  T
Q  227 tttacttgcatgcctattaatataactataaatagatgttcaaacacttttgtaaactagttttgatgttaatataatttgatgacaagttttcacactt 326  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12308555 ttaacttgcatgcctattaatataactataaatagaagttcaaacacttttgtaaactag-tttgatgttaatataatttgatgacaagttttcacactt 12308653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 43851782 - 43851665
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | |||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgtttacagggactaaaaccggaattcgctaatattacagggac 43851683  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||||||||||||||||    
T  43851682 gaaaagaggtatttaccc 43851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 10108485 - 10108367
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  10108485 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacga 10108386  T
Q  113 aaagaggtatttacccttt 131  Q
    |||||||||||||||||||    
T  10108385 aaagaggtatttacccttt 10108367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 14820409 - 14820295
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||        ||||| |||| |||| ||||||| ||||||||| | ||||||    
T  14820409 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacgaa 14820310  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||||||||    
T  14820309 aagaggtatttaccc 14820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 21148051 - 21147933
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||          |||||||||| |||| ||||||| ||||||||| | ||| |    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacaa 21147952  T
Q  113 aaagaggtatttacccttt 131  Q
    ||||||||||| |||||||    
T  21147951 aaagaggtattaacccttt 21147933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 10108634 - 10108752
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||| | ||||||||| | ||||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacgaa 10108733  T
Q  114 aagaggtatttaccctttt 132  Q
    |||||||||| ||||||||    
T  10108734 aagaggtattaaccctttt 10108752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 30789773 - 30789887
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| |||||   ||||||||| | ||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaatttactaatattacagggacgaaaa 30789872  T
Q  116 gaggtatttaccctt 130  Q
    |||||||||||||||    
T  30789873 gaggtatttaccctt 30789887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 7689783 - 7689904
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||| ||||||         ||| |||||| || | ||||||| ||||||||| | ||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaatcggaattcgctaatattacaggga 7689882  T
Q  110 cgaaaagaggtatttacccttt 131  Q
    ||||||||||||||||||||||    
T  7689883 cgaaaagaggtatttacccttt 7689904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 14820558 - 14820675
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||| ||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggactaa 14820657  T
Q  114 aagaggtatttacccttt 131  Q
    |||||||||| |||||||    
T  14820658 aagaggtattaacccttt 14820675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 5554983 - 5554868
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| ||||||||  |||| ||||||| ||||         |||||||||| |||| ||||||| ||||||||| | ||||||    
T  5554983 agggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaa 5554884  T
Q  114 aagaggtatttaccct 129  Q
    ||||||||||||||||    
T  5554883 aagaggtatttaccct 5554868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 10171403 - 10171522
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    |||||||||||||||||  |||||||| ||||||| |||| |||||||||||          |||||||||| |||| ||||||| ||||||||| | ||    
T  10171403 aatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccggaattcgctaatattacaggga 10171502  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||| ||||||||||||    
T  10171503 cgaaaagcggtatttaccct 10171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 21148258 - 21148316
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctt 130  Q
    |||||||||| |||| ||||||  ||||||||| |||||||||||||||||||||||||    
T  21148258 acagggactaaaaccggaattcactaatattacagagacgaaaagaggtatttaccctt 21148316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 26136945 - 26136994
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 42113102 - 42112993
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||||||||||||||||  |||||||| ||||||| |||| | ||||||||||        |||||||||| || | ||||||| ||||||||| | |||    
T  42113102 aatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatcttttttttacagggactaaaatcggaattcgctaatattacagggac 42113003  T
Q  111 gaaaagaggt 120  Q
    ||||||||||    
T  42113002 gaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 42606019 - 42606132
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||||         |||  ||||| |||||||||||| ||||||||| | ||| ||||    
T  42606019 ggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaaccagaattcgctaatattacagggacaaaaa 42606118  T
Q  116 gaggtatttaccct 129  Q
    ||| ||||||||||    
T  42606119 gagatatttaccct 42606132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 30789625 - 30789519
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| || |||||||||||||| | || ||||||||||||        |||||||||| || | ||||||| ||||||||| | |||    
T  30789625 aatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacagggac 30789526  T
Q  111 gaaaaga 117  Q
    |||||||    
T  30789525 gaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 42605868 - 42605822
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  42605868 gagggaccaaaagtggaagaatatgaaattacagggataaaatctaa 42605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 2583435 - 2583386
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||| |||||||||||||||| |||||||| |||| ||||||||||||    
T  2583435 gagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaatc 2583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 2583580 - 2583700
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggag 108  Q
    ||||||| ||||||||| ||||||||||||||||  |||| ||||| ||||||          |||||| ||| ||| |||||||| ||||||||||  |    
T  2583580 aatgaggaaccaaaagtggaagaatctgaaattatagggacaaaatttaaatcttttttttttacagggcctaaaactagaattcgctaatattacgagg 2583679  T
Q  109 acgaaaagaggtatttaccct 129  Q
    |||||||||| ||||||||||    
T  2583680 acgaaaagagatatttaccct 2583700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 14767621 - 14767505
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||| ||| ||||||||||||| |||| ||||||||||||          |  ||||||| ||||| |||||| ||||||||| |||| ||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaaccaaaattcgctaatattacagagatga 14767522  T
Q  113 aaagaggtatttaccct 129  Q
    ||||||||||| |||||    
T  14767521 aaagaggtattaaccct 14767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 5555133 - 5555181
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 5555181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 18044153 - 18044205
Alignment:
Q  76 ggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||| |||| ||||||| ||||||||| | |||||||||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 18044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22494644 - 22494696
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||| ||||||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatc 22494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 42113303 - 42113361
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctt 130  Q
    ||||| |||| ||||  |||||||||||||||| | |||||||||| ||||||||||||    
T  42113303 acaggaactaaaaccgaaattcgttaatattacagggacgaaaagatgtatttaccctt 42113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 43481637 - 43481695
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctt 130  Q
    |||| ||||| |||| ||||||| ||||||||| | ||||||||||| |||||||||||    
T  43481637 acagagactaaaaccggaattcgctaatattacagtgacgaaaagagatatttaccctt 43481695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 7689563 - 7689523
Alignment:
Q  89 aattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    |||||| ||||||||| | ||||||||||||||||||||||    
T  7689563 aattcgctaatattacagggacgaaaagaggtatttaccct 7689523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 26532901 - 26532849
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||| ||||||| ||| ||| ||||||||| |||| ||||||||||||    
T  26532901 aatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatc 26532849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 23704921 - 23705039
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| |||||    
T  23704921 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagagac 23705020  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  23705021 gaaaagaggtatttaccct 23705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 28218297 - 28218174
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggag 108  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||          |||||||||| |||| ||||||| ||||||||| | |    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacaggg 28218198  T
Q  109 acgaaaagaggtatttaccctttt 132  Q
    ||||||||||||||||||||||||    
T  28218197 acgaaaagaggtatttaccctttt 28218174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 48672542 - 48672658
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||         |||||||||| ||||  |||||| ||||||||| |||||||    
T  48672542 gagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacagagacga 48672641  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  48672642 aaagaggtatttaccct 48672658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 20419799 - 20419915
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacg 111  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||          |||||||||| |||| ||||||||||||||||| | |||     
T  20419799 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgttaatattacagggaca 20419898  T
Q  112 aaaagaggtatttaccc 128  Q
    |||||||||||||||||    
T  20419899 aaaagaggtatttaccc 20419915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 28218426 - 28218542
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  28218426 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacga 28218525  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  28218526 aaagaggtatttaccct 28218542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 20458809 - 20458691
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||||||||||||| | || |||||||||||         |||||||||| |||| ||||||||||||||||| | |||    
T  20458809 aatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaattttttatttacagggactaaaaccggaattcgttaatattacagggac 20458710  T
Q  111 gaaaagaggtatttaccct 129  Q
    ||||| | |||||||||||    
T  20458709 gaaaaaatgtatttaccct 20458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 16995317 - 16995200
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||| |||||||||||| ||||||||||||||||| |||| |||||||||||         ||||| |||| ||||  |||||| ||||||||| |||||    
T  16995317 aatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaaccgaaattcgctaatattacagagac 16995218  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||||||||||||||||    
T  16995217 gaaaagaggtatttaccc 16995200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 41600221 - 41600338
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||| |    
T  41600221 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacaa 41600320  T
Q  113 aaagaggtatttaccctt 130  Q
    ||||||||||||||||||    
T  41600321 aaagaggtatttaccctt 41600338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 12006658 - 12006540
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||||||| |         |||||||||| || | ||||||| ||||||||| | |||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatttttttttttacagggactaaaatcggaattcgctaatattacagggac 12006559  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  12006558 gaaaagaggtatttaccct 12006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 23704776 - 23704662
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||||||||||||| |||| ||||| ||||||        |||| || || |||| ||||||| ||||||||| | ||||||    
T  23704776 gagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatcttttttttacagtgagtaaaaccggaattcgctaatattacagggacgaa 23704677  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||||||||    
T  23704676 aagaggtatttaccc 23704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 20419654 - 20419536
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||| | ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||  | ||    
T  20419654 aatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattataggga 20419555  T
Q  110 cgaaaagaggtatttaccc 128  Q
    |||||||||||||||||||    
T  20419554 cgaaaagaggtatttaccc 20419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 10409634 - 10409755
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||| ||||||| | || ||||||||||||        |||||||||| || | ||||||| |||||||||   ||     
T  10409634 aatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacatggat 10409733  T
Q  111 gaaaagaggtatttaccctttt 132  Q
    ||||||||||||||||||||||    
T  10409734 gaaaagaggtatttaccctttt 10409755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 20963760 - 20963877
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaag 116  Q
    |||||||||||  |||||||||||||||| ||||  ||||||||||         |||||||||| |||| ||||||| ||||||||| | ||| |||||    
T  20963760 ggaccaaaagtgaaagaatctgaaattacagggactaaatctaaattttatttttacagggactaaaaccggaattcgctaatattacagggacaaaaag 20963859  T
Q  117 aggtatttacccttttgt 134  Q
    ||||||||||||| ||||    
T  20963860 aggtatttaccctattgt 20963877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 25772594 - 25772643
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  25772594 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatc 25772643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 12006803 - 12006919
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| || | ||||||| |||||||||    ||||    
T  12006803 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattacatgaacga 12006902  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  12006903 aaagaggtatttaccct 12006919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 20458954 - 20459069
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||||         ||||| |||| |||| ||||||  ||||||||| | |||||    
T  20458954 gagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatctttttttttacaggtacta-aaccggaattccctaatattacagggacga 20459052  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  20459053 aaagaggtatttaccct 20459069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 23383763 - 23383879
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnna-cagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||| || ||||||| ||||||||| |||| ||||||||||||          ||||||||| || ||||||||  ||||||||| | |||||    
T  23383763 gagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattacagggacga 23383862  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  23383863 aaagaggtatttaccct 23383879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 38879842 - 38879790
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 38879790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 38879987 - 38880035
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  38879987 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 38880035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 44816953 - 44816901
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatc 44816901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 25772481 - 25772362
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||| |||||||||  ||| ||||||||||||        ||||  |||| || |  |||||| ||||||||| | |||    
T  25772481 aatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagaaactaaaatcgaaattcgctaatattacagggac 25772382  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||    
T  25772381 gaaaagaggtatttaccctt 25772362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 33162875 - 33162917
Alignment:
Q  89 aattcgttaatattacggagacgaaaagaggtatttacccttt 131  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  33162875 aattcgctaatattacagagacgaaaagaggtatttacccttt 33162917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 10409488 - 10409440
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  10409488 agggactaaaagtagaagaatctgaaattacaaggacaaaatctaaatc 10409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 20963613 - 20963561
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||||| ||||||| ||||  |||||||||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatc 20963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 24195056 - 24195108
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 24195198 - 24195250
Alignment:
Q  76 ggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||| || ||||||||| ||||||||| | |||||||||||||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtatttaccc 24195250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 7658287 - 7658342
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttacc 127  Q
    |||| ||||| ||||  |||||||||||||||| | ||||||||||||||||||||    
T  7658287 acagagactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttacc 7658342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 41600076 - 41600025
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    ||||||||| |||| || ||||||||||||||||| |||| |||||||||||    
T  41600076 aatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaat 41600025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 23383553 - 23383499
Alignment:
Q  74 agggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||||| |||| ||||||  ||||||||| |||||||||||| ||||||||||    
T  23383553 agggactaaaaccggaattcactaatattacagagacgaaaagaagtatttaccc 23383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 1250469 - 1250518
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||||||| ||||||||  |||| ||||||||||||    
T  1250469 gagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatc 1250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 24194978 - 24194929
Alignment:
Q  15 agggaccaaaagt-agaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| ||| |||||||||||||| |||| ||||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggacaaaatctaaatc 24194929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 31852169 - 31852210
Alignment:
Q  89 aattcgttaatattacggagacgaaaagaggtatttaccctt 130  Q
    |||||||||||||||| | |||||||||||||||| ||||||    
T  31852169 aattcgttaatattacagggacgaaaagaggtattaaccctt 31852210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 38879763 - 38879723
Alignment:
Q  88 gaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    ||||||| ||||||||| | |||||||||||||||||||||    
T  38879763 gaattcgctaatattacagggacgaaaagaggtatttaccc 38879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 48648379 - 48648327
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||| |  || ||||||||||||| |||| ||||||||||||    
T  48648379 aatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatc 48648327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 48672397 - 48672345
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||| ||||||| ||||||||||||||||| | ||  |||||||||||    
T  48672397 aatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatc 48672345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 39711332 - 39711452
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||         |||||||||| |||||||||||| ||||||||| | ||    
T  39711332 aatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacaggga 39711431  T
Q  110 cgaaaagaggtatttaccctt 130  Q
    |||||||||||||||||||||    
T  39711432 cgaaaagaggtatttaccctt 39711452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 18462400 - 18462282
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||| | ||||||||||||||||| |||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | ||||||    
T  18462400 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaa 18462301  T
Q  114 aagaggtatttaccctttt 132  Q
    |||||||||||||||||||    
T  18462300 aagaggtatttaccctttt 18462282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 33628808 - 33628689
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||         || ||||||| |||||||||||| ||||||||| | ||    
T  33628808 aatgagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacaggga 33628709  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||||||||||||||    
T  33628708 cgaaaagaggtatttaccct 33628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 34749255 - 34749136
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||        | |||||||| || ||||||||| ||||||||| | ||     
T  34749255 aatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttatagggactaaaatcagaattcgctaatattacagggat 34749156  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||| ||||||||||||    
T  34749155 gaaaagatgtatttaccctt 34749136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 8293067 - 8293188
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggag 108  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||          |||||||||| ||| |||||||||||||||||  | |    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaactagaattcgttaatattataggg 8293166  T
Q  109 acgaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||||    
T  8293167 acgaaaagaggtatttaccctt 8293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 24467743 - 24467625
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||        |||||||||| ||   ||||||| ||||||||| | ||||||    
T  24467743 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaattggaattcgctaatattacagggacgaa 24467644  T
Q  114 aagaggtatttaccctttt 132  Q
    |||| ||||||||||||||    
T  24467643 aagatgtatttaccctttt 24467625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 4907080 - 4906960
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| ||| |||||||  ||||||||| | ||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcactaatattacaggga 4906981  T
Q  110 cgaaaagaggtatttaccctt 130  Q
    |||||||||||||||||||||    
T  4906980 cgaaaagaggtatttaccctt 4906960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 17606572 - 17606686
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | |||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt-acagggactaaaaccggaattcgctaatattacagggacgaaa 17606670  T
Q  115 agaggtatttaccctt 130  Q
    ||||||||| ||||||    
T  17606671 agaggtattaaccctt 17606686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 39711187 - 39711074
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||| |||||||||  ||| ||||||||||||        |||||||||| |||| ||||||| |||||||||  |||||||    
T  39711187 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca-agacgaa 39711089  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||||||||    
T  39711088 aagaggtatttaccc 39711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 52058271 - 52058388
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| | ||||||||||         ||||| |||| ||||| |||||| ||||||||| | |||||    
T  52058271 gagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgctaatattacagggacga 52058370  T
Q  113 aaagaggtatttaccctt 130  Q
    ||||||||||||||||||    
T  52058371 aaagaggtatttaccctt 52058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 29696671 - 29696564
Alignment:
Q  22 aaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaagaggta 121  Q
    |||||| ||||||| |||||||||||||| ||||||||||||        |||| ||||| ||||  |||||| ||||||||| | ||||||||||||||    
T  29696671 aaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagaggta 29696572  T
Q  122 tttaccct 129  Q
    ||||||||    
T  29696571 tttaccct 29696564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 29696818 - 29696937
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| |||||||||||||||||  ||| ||||||||| |         |||| ||||| |||| ||||||| |||||||||  | ||    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggacaaaatctaatttttttttttacagtgactaaaaccggaattcgctaatattacataaac 29696917  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||    
T  29696918 gaaaagaggtatttaccctt 29696937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 34749368 - 34749483
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||||         ||| |||||| || | ||||||| ||||||||| ||||| |    
T  34749368 gaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaa 34749467  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  34749468 aaagaggtatttaccc 34749483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18462544 - 18462596
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  18462544 aatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatc 18462596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 24467887 - 24467939
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  24467887 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 24467939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 39826312 - 39826424
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| ||||  |||||| |||||||||   ||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaa 39826411  T
Q  116 gaggtatttaccc 128  Q
    |||||||||||||    
T  39826412 gaggtatttaccc 39826424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 30299491 - 30299609
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||         ||||| |||| ||||  |||| | ||||||||| ||||    
T  30299491 aatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaaccgaaatttgctaatattacagaga 30299590  T
Q  110 cgaaaagaggtatttaccc 128  Q
    |||||| ||||||||||||    
T  30299591 cgaaaataggtatttaccc 30299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 52058129 - 52058011
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||||||||||||| |||| | | ||||||||         ||||  |||| |||| |||||||||||||||||   ||    
T  52058129 aatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaaccggaattcgttaatattacaagga 52058030  T
Q  110 cgaaaagaggtatttaccc 128  Q
    |||||||||||||||||||    
T  52058029 cgaaaagaggtatttaccc 52058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 4907225 - 4907274
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  4907225 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 4907274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 20995754 - 20995697
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    |||||||||| |||| ||||||| ||||||||| |||| |||||||||||||||||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttaccct 20995697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 39826168 - 39826116
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 39826116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 39970909 - 39971024
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||| |||| |||| ||||||| |||| ||||||||||||          |||||||||| ||||  ||||||||||||||||   |||||    
T  39970909 agggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccgaaattcgttaatattacatggacga 39971008  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  39971009 aaagaggtatttaccc 39971024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 20995932 - 20996047
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||| ||||||||| | || ||||||||||||        ||| |||||| ||| | |||||| ||||||||| | ||| |||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaactaaaattcgctaatattacagggacaaaa 20996031  T
Q  115 agaggtatttaccctt 130  Q
    ||||||||| ||||||    
T  20996032 agaggtattaaccctt 20996047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 30252158 - 30252279
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatat--tacgga 107  Q
    ||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||         |||||||||| |||||||||||| ||||||  || |||    
T  30252158 aatgagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattataggga 30252257  T
Q  108 gacgaaaagaggtatttaccct 129  Q
     | | |||||||||||||||||    
T  30252258 caaggaaagaggtatttaccct 30252279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 33628953 - 33629071
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaa-atcnnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| |||||| ||  |         |||||||||| |||| ||||||| ||||||||| | ||| |    
T  33628953 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaattttttttttttacagggactaaaaccggaattcgctaatattacagggacaa 33629052  T
Q  113 aaagaggtatttacccttt 131  Q
    ||||||||||| |||||||    
T  33629053 aaagaggtattaacccttt 33629071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17606426 - 17606374
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| ||||||||| || | ||||||||||||    
T  17606426 aatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatc 17606374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 39970764 - 39970712
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| |||||||||||||||||   || ||||||||||||    
T  39970764 aatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatc 39970712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 33628846 - 33628885
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacgggga 50  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  33628846 aatgagggaccaaaagtagaggaatctgaaattacaggga 33628885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42510132 - 42510081
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    |||||||||| |||||| ||||||| ||||||||| |||| |||||||||||    
T  42510132 aatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaat 42510081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 17606360 - 17606307
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtattta 125  Q
    |||||||||| || | ||||||| ||||||||| | ||||||||||||||||||    
T  17606360 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 18342279 - 18342395
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||||||||| |||||| ||||||| |||||||||  | ||||||| |||||         |||||||||| ||||  |||||| ||||||||| | |||    
T  18342279 aatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaat-ttttttttacagggactaaaaccgaaattcgctaatattacagggac 18342377  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||| ||||||||||||    
T  18342378 gaaaaaaggtatttaccc 18342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30299342 - 30299297
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  30299342 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 30299297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 34749293 - 34749333
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggat 51  Q
    ||||||||||||||||| || |||||||||||||| |||||    
T  34749293 aatgagggaccaaaagtggaggaatctgaaattacagggat 34749333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 48072183 - 48072143
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggat 51  Q
    ||||||||||||||||| || |||||||||||||| |||||    
T  48072183 aatgagggaccaaaagtggaggaatctgaaattacagggat 48072143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 19113028 - 19113143
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||| |||| ||||||||||||||||  | |||||    
T  19113028 gagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatctttttttttacagggactaaaaccggaattcgttaatattatagggacga 19113127  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  19113128 aaagaggtatttaccc 19113143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 9267093 - 9266971
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggga 9266994  T
Q  110 cgaaaagaggtatttaccctttt 132  Q
    |||||||||||||||||||||||    
T  9266993 cgaaaagaggtatttaccctttt 9266971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 30500304 - 30500426
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||| ||| ||||||||| |||| |||||||||||         |||||||||| |||  ||||||| ||||||||| | ||||||    
T  30500304 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaactggaattcgctaatattacagggacgaa 30500403  T
Q  114 aagaggtatttacccttttgtaa 136  Q
    ||||||||||||||||| |||||    
T  30500404 aagaggtatttacccttatgtaa 30500426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 14162135 - 14162248
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | ||| |||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctcttttttacagggactaaaaccggaattcgctaatattacagggacaaaa 14162234  T
Q  115 agaggtatttaccc 128  Q
    ||||||||| ||||    
T  14162235 agaggtattaaccc 14162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 14171852 - 14171965
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| |||||||| |||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||||||||    
T  14171852 ggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaa 14171951  T
Q  116 gaggtatttaccct 129  Q
    ||||||||||||||    
T  14171952 gaggtatttaccct 14171965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 33372521 - 33372405
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||| ||||||||||||| |||| ||||||||||||         ||||| |||| |||||||||||| ||||||||| | |||||    
T  33372521 gagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgctaatattacagggacga 33372422  T
Q  113 aaagaggtatttaccct 129  Q
    |||||| ||||||||||    
T  33372421 aaagagatatttaccct 33372405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 9267238 - 9267353
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||||          |||||||||| || | ||||||| |||||||||   ||||||    
T  9267238 gagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaaaatttatatacagggactaaaatcggaattcgctaatattacaaggacgaa 9267337  T
Q  114 aagaggtatttaccct 129  Q
    ||||||||||||||||    
T  9267338 aagaggtatttaccct 9267353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 35995796 - 35995677
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatct-aaatcnnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||| |||          |||||||||| |||| ||||||| ||||||||| |  |    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaaccggaattcgctaatattacaggaa 35995697  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||||||||||||||    
T  35995696 cgaaaagaggtatttaccct 35995677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 45970026 - 45969911
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaaaag 116  Q
    ||||||||||  |||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||  ||||||||| | |||||||||    
T  45970026 gaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacagggacgaaaag 45969927  T
Q  117 aggtatttaccctttt 132  Q
    ||||||||||||||||    
T  45969926 aggtatttaccctttt 45969911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16722105 - 16721987
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| |||||||||||||||||  ||| |||||||||||          |||| ||||| |||| ||||||| ||||||||| | ||||||    
T  16722105 agggaccaaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaa 16722006  T
Q  114 aagaggtatttaccctttt 132  Q
    |||||||||||||||||||    
T  16722005 aagaggtatttaccctttt 16721987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 43572651 - 43572769
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||||||||||||| |||| | |||||||||         ||||| |||| |||| ||||| || |||||||| | ||     
T  43572651 aatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaattttttttttacaggaactaaaaccggaatttgtcaatattacagggat 43572750  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  43572751 gaaaagaggtatttaccct 43572769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 49986639 - 49986526
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||          |||| ||||| |||| ||||||  ||||||||| | ||||||||    
T  49986639 gaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatattacagggacgaaaa 49986540  T
Q  116 gaggtatttaccct 129  Q
    ||||||||||||||    
T  49986539 gaggtatttaccct 49986526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 4204826 - 4204709
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||||||||||||| |||| | ||||||||||        ||||| |||| |||   ||||| |||||||||| | |||    
T  4204826 aatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacaggaactaaaactgaaattcattaatattacagggac 4204727  T
Q  111 gaaaagaggtatttaccc 128  Q
    |||||||||| |||||||    
T  4204726 gaaaagaggtctttaccc 4204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 14262299 - 14262416
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||| |||||| ||| ||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  14262299 gagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacga 14262398  T
Q  113 aaagaggtatttaccctt 130  Q
    ||||||||||||||||||    
T  14262399 aaagaggtatttaccctt 14262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 21633156 - 21633208
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 21633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 47575539 - 47575651
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaaga 117  Q
    |||||||||| ||| ||||||||||||| | || ||||||||| |         |||||||||| |||||||||||  | |||||||||||||||| |||    
T  47575539 gaccaaaagttgaaaaatctgaaattacagagacaaaatctaatttttttttttacagggactaaaaccagaattcactcatattacggagacgaataga 47575638  T
Q  118 ggtatttaccctt 130  Q
    |||||||||||||    
T  47575639 ggtatttaccctt 47575651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 5800720 - 5800605
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||| | ||||||| ||||||||| |||| | ||||||||||         |||||||||| ||||  |||||||||||||||| | |||||    
T  5800720 gagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgttaatattacagggacga 5800621  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  5800620 aaagaggtatttaccc 5800605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 16722255 - 16722370
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||   |||||| ||||||||| | ||||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacgaa 16722354  T
Q  114 aagaggtatttaccct 129  Q
    ||||||||||||||||    
T  16722355 aagaggtatttaccct 16722370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 27946187 - 27946253
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttacccttttgtaatt 138  Q
    |||||||||| |||| ||||||| ||||||||| | |||||||||||||||||||||| || |||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccctcttataatt 27946253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 33372669 - 33372783
Alignment:
Q  16 gggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnna-cagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    |||| ||||||| ||||||||||||||||| |||| ||||||||||||        | |||| |||| || |  |||||| ||||||||||| |||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaatcgaaattcgctaatattacggggacgaaa 33372768  T
Q  115 agaggtatttaccct 129  Q
    |||||||||||||||    
T  33372769 agaggtatttaccct 33372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 14171704 - 14171583
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||        ||||  | || || | ||||||| ||||||||| | |||    
T  14171704 aatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagaaattaaaatcggaattcgctaatattacagggac 14171605  T
Q  111 gaaaagaggtatttaccctttt 132  Q
    |||||| |||||||||||||||    
T  14171604 gaaaagtggtatttaccctttt 14171583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 14262150 - 14262033
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaat-cnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||          ||| |||||| |||| ||||||| ||||||||| | ||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatattacagggacgaa 14262051  T
Q  114 aagaggtatttacccttt 131  Q
    ||||| |||| |||||||    
T  14262050 aagagatattaacccttt 14262033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 19112879 - 19112763
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||| ||||||| ||||||| | |||| ||||||||||||          |||||||||| |||| ||||||| |||||||||   |||||    
T  19112879 agggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacatggacga 19112780  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  19112779 aaagaggtatttaccct 19112763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 20853959 - 20854008
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  20853959 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 20854008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 30500155 - 30500040
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||||||         |||||||||| ||||  |||||| ||||||||| | || ||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat-ttttttttacagggactaaaaccgaaattcgctaatattacagggatgaaa 30500057  T
Q  115 agaggtatttacccttt 131  Q
    ||||||||| |||||||    
T  30500056 agaggtattaacccttt 30500040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 43572504 - 43572456
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  43572504 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 43572456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 20853814 - 20853692
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggag 108  Q
    ||||||||||||||||| ||||||| ||||||||  |||| ||||||||||||          ||||||  || ||||  |||||| ||||||||| | |    
T  20853814 aatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaaccgaaattcgctaatattacaggg 20853715  T
Q  109 acgaaaagaggtatttacccttt 131  Q
    |||||||||||||||||||||||    
T  20853714 acgaaaagaggtatttacccttt 20853692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 45003611 - 45003496
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||| |||||| ||||||||||||||||| |||| ||||||||||||         | |||||||  |||| ||||| | ||||||||||| |||||    
T  45003611 gagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttatagggactgaaaccggaatttgctaatattacggggacga 45003512  T
Q  113 aaagaggtatttaccc 128  Q
    |||||| |||||||||    
T  45003511 aaagagatatttaccc 45003496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 52552951 - 52553070
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||| ||||||||| | || ||||||||||||         |||||||||| ||| |||||||| |||||||||   |||||    
T  52552951 gagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattacaaggacga 52553050  T
Q  113 aaagaggtatttaccctttt 132  Q
    ||||| ||||||||| ||||    
T  52553051 aaagatgtatttaccttttt 52553070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 5800869 - 5800982
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| |||||||||  ||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggacta-aaccggaattcgctaatattacagggacgaa 5800967  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||| ||||    
T  5800968 aagaggtattaaccc 5800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 11003844 - 11003730
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||| ||         |||||||||| |||| ||||||| |||||||||   ||| ||||    
T  11003844 ggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtctttttatttacagggactaaaaccggaattcggtaatattacaaggacaaaaa 11003745  T
Q  116 gaggtatttaccctt 130  Q
    |||||||||||||||    
T  11003744 gaggtatttaccctt 11003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 45970183 - 45970296
Alignment:
Q  19 accaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn--acagggactataaccagaattcgttaatattacggagacgaaaag 116  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||||||          |||||||||| ||||  |||||  ||||||||| | |||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggacgaaaag 45970282  T
Q  117 aggtatttaccctt 130  Q
    ||||||||||||||    
T  45970283 aggtatttaccctt 45970296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 15328724 - 15328840
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||| ||| ||||||||||||| |||| ||||||||||||          |  ||||||| ||||| |||||| ||||||||| |||| ||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaaccaaaattcgctaatattacagagatga 15328823  T
Q  113 aaagaggtatttaccct 129  Q
    ||||||||||| |||||    
T  15328824 aaagaggtattaaccct 15328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 35995942 - 35996057
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||||||||||||| | || ||| ||||| |         |||||||||| || | ||||||| ||||||||| | |||||||    
T  35995942 agggaccaaaagtggaagaatctgaaattactgagacaaattctaatt--tttttttacagggactaaaatcggaattcgctaatattacagggacgaaa 35996039  T
Q  115 agaggtatttaccctttt 132  Q
    ||| ||||||||||||||    
T  35996040 agatgtatttaccctttt 35996057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 19720389 - 19720333
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||||||| |||| ||||||| ||||||||| | ||||||||||| |||||||||    
T  19720389 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 19720333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 52552806 - 52552758
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||| ||||||| ||||||||||||||||| |||| ||||||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 52552758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21632940 - 21632898
Alignment:
Q  89 aattcgttaatattacggagacgaaaagaggtatttacccttt 131  Q
    |||||| ||||||||| | ||||||||||||||||||||||||    
T  21632940 aattcgctaatattacagggacgaaaagaggtatttacccttt 21632898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 45003756 - 45003874
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| ||||||||  ||||  |||||||||||        ||||| |||| ||||  |||||| ||||||||| | |||    
T  45003756 aatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaaccgaaattcgctaatattacagggac 45003855  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||| ||  ||||||||||    
T  45003856 gaaacgatatatttaccct 45003874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 14161986 - 14161937
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||||||| ||||||||| |||| | ||||||||||    
T  14161986 gagggaccaaaagtggaagaatatgaaattacagggacataatctaaatc 14161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 49986850 - 49986907
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    ||||| |||| ||||  |||||| ||||||||| | ||||||||||||||||||||||    
T  49986850 acaggaactaaaaccgaaattcgctaatattactgggacgaaaagaggtatttaccct 49986907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 14144019 - 14143898
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||| ||||||||| ||||||| ||||||||| |||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | |||    
T  14144019 aatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggac 14143920  T
Q  111 gaaaagaggtatttaccctttt 132  Q
    ||||||||||||||||||||||    
T  14143919 gaaaagaggtatttaccctttt 14143898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 17762542 - 17762661
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||         |||||||||| |||||||||||| ||||| ||| | ||    
T  17762542 aatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatactacaggga 17762641  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||||||||||||||    
T  17762642 cgaaaagaggtatttaccct 17762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 23979161 - 23979279
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | ||    
T  23979161 aatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggga 23979260  T
Q  110 cgaaaagaggtatttaccc 128  Q
    |||||||||||||||||||    
T  23979261 cgaaaagaggtatttaccc 23979279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 17762397 - 17762280
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||||||||||||| || | ||||| ||||||        |||||||||| |||| ||||||| ||||||||| | ||| ||    
T  17762397 gagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatcttttttttacagggactaaaaccggaattcgctaatattacagggacaaa 17762298  T
Q  114 aagaggtatttacccttt 131  Q
    ||||||||||||||||||    
T  17762297 aagaggtatttacccttt 17762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 30512405 - 30512285
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||| ||||||||||||| ||||  |||||||||||        |||||||||| ||||| |||||  ||||||||| | |||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggac 30512306  T
Q  111 gaaaagaggtatttacccttt 131  Q
    |||||||| ||||||||||||    
T  30512305 gaaaagagatatttacccttt 30512285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 30552745 - 30552625
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||| ||||||||||||| ||||  |||||||||||        |||||||||| ||||| |||||  ||||||||| | |||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatcctttttttacagggactaaaaccaaaattcactaatattacagggac 30552646  T
Q  111 gaaaagaggtatttacccttt 131  Q
    |||||||| ||||||||||||    
T  30552645 gaaaagagatatttacccttt 30552625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 6817240 - 6817121
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| |||||||||||||||||  ||| | ||||||||||        |||||||||| |||| ||||||  |||||||||   |||    
T  6817240 aatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatcttttttttacagggactaaaaccggaattcactaatattacaaggac 6817141  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||    
T  6817140 gaaaagaggtatttaccctt 6817121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 14411926 - 14412044
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||||||||||||| || |||||||||||||||||  ||| |||||||||||         |||||||||| ||||  |||||||||||||||  ||||     
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaattttttttttacagggactaaaaccgaaattcgttaatattatagagat 14412025  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  14412026 gaaaagaggtatttaccct 14412044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 4919253 - 4919366
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||| |         ||||| |||| |||| ||||||| ||||||| | ||||||||    
T  4919253 gagggatcaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttacaggaactaaaaccggaattcgctaatattccagagacgaa 4919352  T
Q  114 aagaggtatttacc 127  Q
    ||||||||||||||    
T  4919353 aagaggtatttacc 4919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 41001616 - 41001729
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||||||||||||  |||| ||||||||||||        ||| |||||| |||| ||||||| ||||||||| | ||||||    
T  41001616 gagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacaaggactaaaaccggaattcgctaatattacagggacgaa 41001715  T
Q  114 aagaggtatttacc 127  Q
    || |||||||||||    
T  41001716 aaaaggtatttacc 41001729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 14144165 - 14144280
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| || | ||||||||||||||||| | ||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaatattacagtgacgaa 14144264  T
Q  114 aagaggtatttaccct 129  Q
    |||||||||| |||||    
T  14144265 aagaggtattaaccct 14144280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 24837287 - 24837168
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||         |||||||||| |||| ||||||| || |||||| | ||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattattacaggga 24837188  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||||||||||||||    
T  24837187 cgaaaagaggtatttaccct 24837168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 24837432 - 24837547
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||| ||||||||||||||| ||||||||| |||| ||||||||||||         |||||||||| |||  ||||||| ||||||||| | |||||    
T  24837432 gagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattacagggacga 24837531  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  24837532 aaagaggtatttaccc 24837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 31799754 - 31799640
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||  |||| ||||||| ||||||||  | ||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatattatagggacgaa 31799655  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||||||||    
T  31799654 aagaggtatttaccc 31799640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 4919108 - 4918988
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggag 108  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||          ||||| |||| ||||  |||||| ||||||||| |||    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaaccgaaattcgctaatattacagag 4919009  T
Q  109 acgaaaagaggtatttaccct 129  Q
    | |||||||||||||||||||    
T  4919008 atgaaaagaggtatttaccct 4918988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 20709478 - 20709591
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaag 116  Q
    |||| |||||| ||||||| |||||||||  ||| ||||||||||||        |||||||||| ||||| ||||||||||||||||   |||||||||    
T  20709478 ggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatcttttttttacagggactaaaaccaaaattcgttaatattacatggacgaaaag 20709577  T
Q  117 aggtatttaccctt 130  Q
    ||||||| ||||||    
T  20709578 aggtattaaccctt 20709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 7126031 - 7125923
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||||||||||||  |||| ||||||||||||        |||||||||| || | ||||||| ||||||||| |  ||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatcttttttttacagggactaaaatcggaattcgctaatattacaggaacgaaa 7125932  T
Q  115 agaggtatt 123  Q
    |||||||||    
T  7125931 agaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 14411812 - 14411696
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| |||||||||||||||||   || ||||| ||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  14411812 gagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatctttttttatacagggactaaaaccggaattcgctaatattacagggacga 14411713  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  14411712 aaagaggtatttaccct 14411696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 24650962 - 24651078
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||| ||||||| ||||||||| ||||||| ||||||||||||| ||          ||| |||||| |||| ||||||| ||||||||| |||||||    
T  24650962 gagggatcaaaagtggaagaatctaaaattacagggataaaatctagattttcttttttacatggactaaaaccggaattcgctaatattacagagacga 24651061  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  24651062 aaagaggtatttaccct 24651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 29444921 - 29444810
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||||||||||| |||||||||  ||| | ||||||||||         |||||||||| || ||||||||||||||||||| | |||||    
T  29444921 gagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgttaatattacagggacga 29444822  T
Q  113 aaagaggtattt 124  Q
    |||||| |||||    
T  29444821 aaagagatattt 29444810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 18336720 - 18336833
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||| ||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| |||| |||| | ||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat-ttacagggacgaa 18336818  T
Q  114 aagaggtatttaccc 128  Q
    |||||||||||||||    
T  18336819 aagaggtatttaccc 18336833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 993865 - 993746
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| |||||||||  |||  |||||||| |         |||||||||| |||| ||||||| ||||||||| |||||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaatt--tttttttacagggactaaaaccggaattcgctaatattacagagac 993768  T
Q  111 gaaaagaggtatttaccctttt 132  Q
    ||||||| ||||||||| ||||    
T  993767 gaaaagaagtatttaccttttt 993746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 7126180 - 7126296
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||  ||||| |||| ||||||| ||||||||| | || ||    
T  7126180 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgctaatattacagggatga 7126279  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  7126280 aaagaggtatttaccct 7126296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 994009 - 994058
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  994009 gagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatc 994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 27159104 - 27158987
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| ||||||        || | ||||| |||   |||||| |||||||||   |||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttaactgagactaaaactgaaattcgctaatattacatggacgaaa 27159005  T
Q  115 agaggtatttaccctttt 132  Q
    ||||||||| ||||||||    
T  27159004 agaggtattaaccctttt 27158987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 20709330 - 20709278
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| ||||||||| |||| | ||||||||||    
T  20709330 aatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 24074418 - 24074302
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||| ||||||||| | || |||||||||||          |||||||||| ||||  |||||| |||||||||   |||||    
T  24074418 gagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattacatggacga 24074319  T
Q  113 aaagaggtatttaccct 129  Q
    |||||||||||||||||    
T  24074318 aaagaggtatttaccct 24074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 29445070 - 29445118
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 29445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22571195 - 22571144
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    ||||||||||||||||| ||||||| ||||||||| | |||| |||||||||    
T  22571195 aatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaat 22571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 18336583 - 18336534
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||| ||||||  ||||||||||||||||| |||| ||||||||||||    
T  18336583 gagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatc 18336534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 24650741 - 24650704
Alignment:
Q  89 aattcgttaatattacggagacgaaaagaggtatttac 126  Q
    |||||||||||||||| | |||||||||||||||||||    
T  24650741 aattcgttaatattacagggacgaaaagaggtatttac 24650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 41001471 - 41001422
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    ||||| ||||||||||| ||||||| ||||||||| |||| |||||||||    
T  41001471 aatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 41001422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6817388 - 6817432
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    |||||||||| ||||||| ||||||||| |||| |||||||||||    
T  6817388 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24074566 - 24074614
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| ||||||| |||||||||  ||| ||||||||||||    
T  24074566 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 32017767 - 32017884
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||        |||||||||| |||| ||||||| ||||||||| | ||||||    
T  32017767 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacgaa 32017866  T
Q  114 aagaggtatttacccttt 131  Q
    ||||| ||||||||||||    
T  32017867 aagagatatttacccttt 32017884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 18500432 - 18500313
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||        |||||||||| ||||  |||||| ||||||||  | |||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaaccgaaattcgctaatattatagggac 18500333  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||    
T  18500332 gaaaagaggtatttaccctt 18500313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 26385396 - 26385278
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| | ||||||| |||| ||||||||||||         ||| |||||| |||||||||||| ||||||||| ||||    
T  26385396 aatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccagaattcgctaatattacagaga 26385297  T
Q  110 cgaaaagaggtatttaccc 128  Q
    |||||||||||||||||||    
T  26385296 cgaaaagaggtatttaccc 26385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 24732053 - 24731934
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaa----atcnnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||     |         |||||||||| |||| ||||||| ||||||||| | ||    
T  24732053 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttttttacagggactaaaaccggaattcgctaatattacaggga 24731954  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||||||||||||||    
T  24731953 cgaaaagaggtatttaccct 24731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 9481297 - 9481182
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||| | ||||||| ||||||||| |||| | ||||||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  9481297 gagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattacagggacga 9481198  T
Q  113 aaagaggtatttaccc 128  Q
    ||||||||||||||||    
T  9481197 aaagaggtatttaccc 9481182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 19284244 - 19284195
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  19284244 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 19284195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24732198 - 24732318
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||         |||||||||| ||   ||||||| ||||||||| | ||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggacta-aattggaattcgctaatattacaggga 24732296  T
Q  110 cgaaaagaggtatttacccttt 131  Q
    ||||||||||||||||||||||    
T  24732297 cgaaaagaggtatttacccttt 24732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 9481446 - 9481494
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 30618019 - 30617963
Alignment:
Q  76 ggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctttt 132  Q
    |||||| || ||||||||  ||||||||| | |||||||||||||||||||||||||    
T  30618019 ggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccctttt 30617963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 33714605 - 33714553
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 33714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 9854147 - 9854198
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    ||||||||||||||||| ||||||| |||||||||  ||| |||||||||||    
T  9854147 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaat 9854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 18500655 - 18500708
Alignment:
Q  76 ggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    |||||| ||||  |||||| ||||||||| | ||||||||||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccct 18500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 26385596 - 26385649
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtattta 125  Q
    |||||||||| || | ||||||| ||||||||| | ||||||||||||||||||    
T  26385596 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 2299396 - 2299336
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctttt 132  Q
    |||||||||| |||| ||||||| |||||||||  ||||||||| |  |||||||||||||    
T  2299396 acagggactaaaaccggaattcgctaatattacatagacgaaaaaaaatatttaccctttt 2299336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 9154990 - 9154946
Alignment:
Q  19 accaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||| | ||||||||||||||||| |||| ||||||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatc 9154946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30618077 - 30618029
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    |||||||||||||| ||| ||| ||||||||| |||| |||||||||||    
T  30618077 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 3273880 - 3273996
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||        | |||||||| ||||  |||||| ||||||||||| |||    
T  3273880 aatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatcttttttttatagggactaaaaccgaaattcgctaatattacgg-gac 3273978  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||||||||||||||||    
T  3273979 gaaaagaggtatttaccc 3273996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 34064100 - 34063983
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||||||||||||| | || ||||||||||||         |||||||||| ||| |||||||||||||||||| | ||    
T  34064100 aatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgttaatattacaggga 34064001  T
Q  110 cgaaaagaggtatttacc 127  Q
    ||||||||||||||||||    
T  34064000 cgaaaagaggtatttacc 34063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 9396959 - 9397077
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||| || |||||||| ||||||||||||||||| |||| ||||||||||||        |||||||||| |||| ||||| | ||||||||| | |||    
T  9396959 aatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaatttgctaatattacagggac 9397058  T
Q  111 gaaaagaggtatttaccct 129  Q
    ||||||| |||||||||||    
T  9397059 gaaaagaagtatttaccct 9397077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 35376273 - 35376164
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaaga 117  Q
    |||||||||| ||||||||| ||||||| | || ||||||||||||        |||||||||| |||||||||||| ||||||||| | |||||||| |    
T  35376273 gaccaaaagtggaagaatctaaaattacagagacaaaatctaaatcttttttttacagggactaaaaccagaattcgctaatattacagggacgaaaata 35376174  T
Q  118 ggtatttacc 127  Q
    ||||||||||    
T  35376173 ggtatttacc 35376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 9619239 - 9619359
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||| ||||||||||| ||||||| |||||||||  ||| ||||||||||||         |||||||||| |||||||||||| ||||||||| | ||    
T  9619239 aatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccagaattcgctaatattacaggga 9619338  T
Q  110 cgaaaagaggtatttaccctt 130  Q
    | |||||||||||||||||||    
T  9619339 caaaaagaggtatttaccctt 9619359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 37012974 - 37013086
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaaga 117  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||| |         |||||||||| |||||||||||| ||||||||| | ||||||| ||    
T  37012974 gaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttatacagggactaaaaccagaattcgctaatattacagggacgaaatga 37013073  T
Q  118 ggtatttaccctt 130  Q
    |||||||||||||    
T  37013074 ggtatttaccctt 37013086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 38574231 - 38574343
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| |||||||||||| ||||||||| | |||||    
T  38574231 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattacagggacga 38574330  T
Q  113 aaagaggtattta 125  Q
    ||| |||||||||    
T  38574331 aaaaaggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 9516873 - 9516988
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||         |||| ||||| ||||  |||||| ||||||||| | |||||    
T  9516873 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacga 9516972  T
Q  113 aaagaggtatttaccc 128  Q
    |||||| |||||||||    
T  9516973 aaagagatatttaccc 9516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 38574086 - 38573968
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||        ||||||| || || | ||||||  |||||||||   |||    
T  38574086 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggattaaaatcggaattcactaatattacatggac 38573987  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  38573986 gaaaagaggtatttaccct 38573968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 9619095 - 9618982
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| |||||||||   |||||    
T  9619095 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattacatggacga 9618996  T
Q  113 aaagaggtatttac 126  Q
    ||| ||||||||||    
T  9618995 aaataggtatttac 9618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 35376388 - 35376509
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||| ||||||||||| |||| ||||| ||||||        |||||||||| |||  ||||| | ||||||||| | |||    
T  35376388 aatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatcttttttttacagggactaaaactggaatttgctaatattacagggac 35376487  T
Q  111 gaaaagaggtatttaccctttt 132  Q
    |||||||| |||||| ||||||    
T  35376488 gaaaagagatatttatcctttt 35376509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 46046687 - 46046803
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||| ||||||| ||||||||||||||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | |||||    
T  46046687 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacga 46046786  T
Q  113 aaagaggtatttaccctt 130  Q
    ||| ||||||||||||||    
T  46046787 aaa-aggtatttaccctt 46046803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 12904864 - 12904745
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||||| |||||||||| ||||||||||||||||   ||| |||||||||||         |||||||||| ||||| |||||| ||||||||  | |||    
T  12904864 aatgagagaccaaaagtggaagaatctgaaattataaggacaaaatctaaattttttttttacagggactaaaaccaaaattcgctaatattatagggac 12904765  T
Q  111 gaaaagaggtatttaccctt 130  Q
    |||||||| |||||||||||    
T  12904764 gaaaagagatatttaccctt 12904745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 3018127 - 3018014
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacg 111  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||          || ||||||| |||| ||||||| ||||||||| | ||||    
T  3018127 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgctaatattacagggacg 3018028  T
Q  112 aaaagaggtattta 125  Q
    ||||||||||||||    
T  3018027 aaaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 15640830 - 15640724
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    ||||||||||||||  |||||| ||||||||| |||| ||||||||||||        ||||| |||| |||| ||||||| ||||||||| | ||||||    
T  15640830 gagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacgaa 15640731  T
Q  114 aagaggt 120  Q
    |||||||    
T  15640730 aagaggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 31090324 - 31090370
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  31090324 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 31090370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 9516728 - 9516611
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||         ||| |||||| |||| ||||||| ||||||||| | ||    
T  9516728 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatattacaggga 9516629  T
Q  110 cgaaaagaggtatttacc 127  Q
    ||||||||| ||||||||    
T  9516628 cgaaaagagatatttacc 9516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 31218303 - 31218360
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    |||||||||| |||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccct 31218360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 31090179 - 31090127
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 31090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37012821 - 37012773
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 37012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 41947020 - 41946961
Alignment:
Q  73 cagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctttt 132  Q
    ||||||||| |||| ||||||  ||||||||| | |||||||||||||||||||||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccctttt 41946961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 48259938 - 48259819
Alignment:
Q  15 agggaccaaaagtagaag-aatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||||| || |||||||||||||  ||| ||||||||||||         ||||||| || |||| ||||||| ||||||||| | |||||    
T  48259938 agggaccaaaagtaggaggaatctgaaattacatggacaaaatctaaatctttttatttacagggattaaaaccggaattcgctaatattacagggacga 48259839  T
Q  113 aaagaggtatttaccctttt 132  Q
    |||||| |||||||||||||    
T  48259838 aaagagatatttaccctttt 48259819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 3018276 - 3018389
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| | |||||||||||||||  ||| ||| ||||||||        |||||||||| ||||  |||||||||||||||| | |||||||    
T  3018276 agggaccaaaagtggtagaatctgaaattacacggacaaa-tctaaatcttttttttacagggactaaaaccgaaattcgttaatattacagggacgaaa 3018374  T
Q  115 agaggtatttaccct 129  Q
    |||| |||| |||||    
T  3018375 agagatattaaccct 3018389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 26252383 - 26252337
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  26252383 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 26252497 - 26252615
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    |||| |||||||||||| ||||||| ||||||||| |||| ||||||||||||         ||||| |||| |||  ||||||| ||||||||| | ||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacaggga 26252596  T
Q  110 cgaaaagaggtatttaccc 128  Q
    ||||||||| |||||||||    
T  26252597 cgaaaagagatatttaccc 26252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 7819129 - 7819080
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||| ||||||||| ||||||||||||||||| |||| ||||||||||||    
T  7819129 gaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 7819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 7819274 - 7819322
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatcta 59  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  7819274 aatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 15640975 - 15641027
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||| ||||||||| ||||||||||||||||| |||| | ||||||||||    
T  15640975 aatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatc 15641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 34064246 - 34064294
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||| ||||||||||||||||| | || ||||||||||||    
T  34064246 agggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 43313533 - 43313589
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||||||| |||||||||||| ||||||||| ||||| ||||| |||||| ||||    
T  43313533 acagggactaaaaccagaattcgctaatattacagagaccaaaagtggtattaaccc 43313589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 48260011 - 48260126
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    |||||| || ||||||| ||||||| ||||||||| |||| ||||||||||||        |||| || || || || |||||| ||||||||| | |||    
T  48260011 aatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatcttttttttacagagattaaaatcaaaattcgctaatattacagggac 48260110  T
Q  111 gaaaagaggtatttac 126  Q
    |||||||| |||||||    
T  48260111 gaaaagagatatttac 48260126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 13132205 - 13132318
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||| ||||||||| |||| | ||||||||||        ||| |||||| || |  |||||| ||||||||| | |||||||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggacagaatctaaatcttttttttaca-ggactaaaatcgaaattcgctaatattacagggacgaaa 13132303  T
Q  115 agaggtatttaccct 129  Q
    | |||||||||||||    
T  13132304 ataggtatttaccct 13132318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 31944061 - 31943949
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    |||||||||| ||||||| ||||||||| |||| ||||||||||||          ||||| |||| |||| ||||||| ||||||||| | ||||||||    
T  31944061 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatattacagggacgaaaa 31943962  T
Q  116 gaggtatttaccct 129  Q
    || |||||||||||    
T  31943961 ga-gtatttaccct 31943949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 36887736 - 36887678
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctt 130  Q
    |||||||||| ||||| |||||| ||||||||| | ||| |||||||||||| ||||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggtattaaccctt 36887678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 46046542 - 46046429
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||| ||||||||| |||| ||||||||  |         |||||||||| || | ||||||| ||||||||| | |||    
T  46046542 aatgagggatcaaaagtggaagaatatgaaattacagggacaaaatctattt-----ttttacagggactaaaatcggaattcgctaatattacagggac 46046448  T
Q  111 gaaaagaggtatttaccct 129  Q
    ||||| |||||||||||||    
T  46046447 gaaaaaaggtatttaccct 46046429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 3273737 - 3273692
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatcta 59  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||    
T  3273737 gagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 48580129 - 48580178
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||| ||| ||| ||||||||| |||| ||||||||||||    
T  48580129 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatc 48580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 18667628 - 18667672
Alignment:
Q  88 gaattcgttaatattacggagacgaaaagaggtatttaccctttt 132  Q
    ||||||| ||||||||| | |||||||||||||||| ||||||||    
T  18667628 gaattcgctaatattacagggacgaaaagaggtattaaccctttt 18667672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 18713224 - 18713272
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||| | ||||||||||||||||| | || ||||||||||||    
T  18713224 agggaccaaaactggaagaatctgaaattacagagacaaaatctaaatc 18713272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 19251585 - 19251467
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||||||||        |||||||||| ||||  |||||| ||||||||| | ||||||    
T  19251585 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattacagggacgaa 19251486  T
Q  114 aagaggtatttaccctttt 132  Q
    |||||||||| ||||||||    
T  19251485 aagaggtattaaccctttt 19251467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 26236355 - 26236473
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||| | ||||||||||||||||| |||| ||||||||||||         || |||||| ||||  |||||| ||||||||| | |||    
T  26236355 aatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaaccgaaattcgctaatattacagggac 26236454  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  26236455 gaaaagaggtatttaccct 26236473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 15106327 - 15106443
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||||||||||| |||| |||||||||||         |||||||||| || |  |||||| ||||||||||| |||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat-ttttttttacagggactaaaatcgaaattcgctaatattacggggac 15106425  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||||||||||||||||    
T  15106426 gaaaagaggtatttaccc 15106443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 17850849 - 17850968
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||| |         |||| ||||| ||||  |||||| ||||||||| | |||||    
T  17850849 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgctaatattacagggacga 17850948  T
Q  113 aaagaggtatttaccctttt 132  Q
    ||||||||||||||||||||    
T  17850949 aaagaggtatttaccctttt 17850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 23806212 - 23806330
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| ||||  |||||| ||||||||| | ||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacaggga 23806311  T
Q  110 cgaaaagaggtatttaccc 128  Q
    | |||||||||||||||||    
T  23806312 caaaaagaggtatttaccc 23806330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 17463351 - 17463472
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||| ||||||| ||||||| || |||||| |||| ||||||||||||         |||||||||| |||| ||||||| ||||||||| | |     
T  17463351 aatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggg 17463450  T
Q  110 cgaaaagaggtatttacccttt 131  Q
    ||||||||||||||||||||||    
T  17463451 cgaaaagaggtatttacccttt 17463472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 17850704 - 17850587
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||| ||||||| ||||||||| ||||||| | || ||||||||||||        | |||||||| || | ||||||| ||||||||| | |||    
T  17850704 aatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatcttttttttatagggactaaaatcggaattcgctaatattacagggac 17850605  T
Q  111 gaaaagaggtatttaccc 128  Q
    ||||||||||||||||||    
T  17850604 gaaaagaggtatttaccc 17850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 26135932 - 26135883
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  26135932 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatc 26135883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 26236242 - 26236126
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||||  |||||||||||||||| |||| ||||| ||||||         |||||||||| |||||||||||| |||||||||   |||||    
T  26236242 gagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgctaatattacaaggacga 26236143  T
Q  113 aaagaggtatttaccct 129  Q
    |||||| ||||||||||    
T  26236142 aaagagatatttaccct 26236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 20498860 - 20498746
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| |||||||||||||| || |||| | |||||||||         |||||||||| ||||  |||||| |||||||||  |||||||    
T  20498860 gagggaccaaaagtggaagaatctgaaat-acagggacataatctaaatattttttttacagggactaaaaccgtaattcgctaatattacatagacgaa 20498762  T
Q  114 aagaggtatttaccct 129  Q
    ||||||||||||||||    
T  20498761 aagaggtatttaccct 20498746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 19251730 - 19251848
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||| ||||| ||||||| |||||||||  ||| | ||||||||||        |||||||||| |||| ||||||  |||||||||   |||    
T  19251730 aatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatcttttttttacagggactaaaaccggaattcactaatattacaaggac 19251829  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  19251830 gaaaagaggtatttaccct 19251848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 26560668 - 26560555
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||||||||        |||||||||| || |  |||||||||||||||| | |||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc-tttttttacagggactaaaatcgaaattcgttaatattacagggacgaaa 26560570  T
Q  115 agaggtatttaccct 129  Q
    |||| |||| |||||    
T  26560569 agagatattaaccct 26560555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 15106182 - 15106067
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    |||||||||||||| ||| ||||| ||||||| |||| ||||||||||||         ||||||| || ||||  |||||| ||||||||||| |||||    
T  15106182 gagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatctttttatttacagggattaaaaccgaaattcgctaatattacggggacga 15106083  T
Q  113 aaagaggtatttaccc 128  Q
    |||||| |||||||||    
T  15106082 aaagagatatttaccc 15106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 20499005 - 20499124
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||| |||||||||||  |||||||||||||||| |||| ||||||||||||         |||| ||||| |||| ||||| ||||||||| | ||||    
T  20499005 aatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagtgactaaaaccggaatttgttaatatttcagaga 20499104  T
Q  110 cgaaaagaggtatttaccct 129  Q
     ||||| |||||||||||||    
T  20499105 tgaaaataggtatttaccct 20499124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 22263305 - 22263192
Alignment:
Q  15 agggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaa 114  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||        | || ||||| |||||||||||  ||||||||| | || ||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttcatagagactaaaaccagaattctctaatattacagggatgaaa 22263206  T
Q  115 agaggtatttaccc 128  Q
    ||| ||||| ||||    
T  22263205 agatgtattaaccc 22263192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 22263454 - 22263573
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn---acagggactataaccagaattcgttaatattacggagac 110  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||||| ||||           |||| ||||| |||| ||||||| ||||||||| |  ||    
T  22263454 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaaaccggaattcgctaatattacaggaac 22263553  T
Q  111 gaaaagaggtatttaccctt 130  Q
    ||||||||||||||||||||    
T  22263554 gaaaagaggtatttaccctt 22263573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 23854797 - 23854688
Alignment:
Q  20 ccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggagacgaaaagag 118  Q
    |||||||| ||||||| ||||||||| |||| ||||||||||||         |||||||||| ||||  |||||| ||||||||| | |||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  119 gtatttaccc 128  Q
    ||||| ||||    
T  23854697 gtattaaccc 23854688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 30390577 - 30390528
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    ||||||||||||||||| ||||||| ||||||||| |||| |||||||||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30390528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 13254696 - 13254730
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattac 45  Q
    ||||||||||||||||| |||||||||||||||||    
T  13254696 aatgagggaccaaaagtggaagaatctgaaattac 13254730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17463209 - 17463160
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaa 60  Q
    ||||||||||||||||| | |||| |||||||||| |||| |||||||||    
T  17463209 aatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaa 17463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 23855027 - 23855072
Alignment:
Q  83 aaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||| ||||||| ||||||||| | |||||||||||||||||||||    
T  23855027 aaccggaattcgctaatattacagggacgaaaagaggtatttaccc 23855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 13284668 - 13284716
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatcta 59  Q
    ||||||||||||||||| || ||||||||||||||  ||| ||||||||    
T  13284668 aatgagggaccaaaagtggaggaatctgaaattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 26136143 - 26136195
Alignment:
Q  76 ggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||| ||||  ||||||||||||||||   |||||||||||||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtatttaccc 26136195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 42670773 - 42670717
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccc 128  Q
    |||||||||| |||| ||||||| || |||||| | |||||||||||||||| ||||    
T  42670773 acagggactaaaaccggaattcgctactattacagggacgaaaagaggtattaaccc 42670717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 7466 - 7582
Alignment:
Q  18 gaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||          |||||||||| |||| ||||||| ||||||||| | ||||||||    
T  7466 gaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaa 7565  T
Q  116 gaggtatttaccctttt 132  Q
     ||||||||||||||||    
T  7566 taggtatttaccctttt 7582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 7344 - 7227
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggaga 109  Q
    ||||||||||| ||||| ||||||| ||||||||| |||| ||||||||||||         ||||| ||||  ||||||||||| |||||||||   ||    
T  7344 aatgagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaagga 7245  T
Q  110 cgaaaagaggtatttacc 127  Q
    ||||||||||||||||||    
T  7244 cgaaaagaggtatttacc 7227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 4823 - 4941
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagac 110  Q
    ||||||||||||||||| ||||||| |||||||||  ||| ||||||||||||        ||||||| || |||| ||||| | ||||||||| | |||    
T  4823 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaaccggaatttgctaatattacagggac 4922  T
Q  111 gaaaagaggtatttaccct 129  Q
    |||||||||||||||||||    
T  4923 gaaaagaggtatttaccct 4941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 4678 - 4560
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc--nnnnnnnnacagggactataaccagaattcgttaatattacggagacg 111  Q
    |||||||||||||||||||||||| ||||||| |||| ||||| ||||||          |||||||||| || | ||||||| |||||||||   ||||    
T  4678 gagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttttttttttacagggactaaaatcggaattcgctaatattacaaggacg 4579  T
Q  112 aaaagaggtatttaccctt 130  Q
    |||||||||||||||||||    
T  4578 aaaagaggtatttaccctt 4560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 338 - 286
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  338 aatgagggaccaaaagtggaagaatctgaaattatggggagaaaatctaaatc 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 539 - 599
Alignment:
Q  72 acagggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccctttt 132  Q
    ||||||| || |||| ||||||||||||||| | ||||  |||||||||||||||||||||    
T  539 acagggagtaaaaccggaattcgttaatattccagagataaaaagaggtatttaccctttt 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 376 - 415
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacgggga 50  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  376 aatgagggaccaaaagtagaggaatctgaaattacaggga 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1525 - 1409
Alignment:
Q  14 gagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacgaa 113  Q
    |||||||||||||| ||||||||||||||||| |||| | ||||||||||        |||||||||| || |  ||||||  |||||||| | | ||||    
T  1525 gagggaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttacagggactaaaatcgaaattcgcaaatattaccgggtcgaa 1426  T
Q  114 aagaggtatttaccctt 130  Q
    |||||||||||||||||    
T  1425 aagaggtatttaccctt 1409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 1672 - 1785
Alignment:
Q  13 tgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnnacagggactataaccagaattcgttaatattacggagacga 112  Q
    ||||||||||||||| |||||||||||||||||  ||| | ||||||| |         | |||||||| |||| ||||||||||||||||| | |||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggacataatctaatt---ttttttatagggactaaaaccggaattcgttaatattacagggacga 1768  T
Q  113 aaagaggtatttaccct 129  Q
    ||||||| |||||||||    
T  1769 aaagagggatttaccct 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 12248 - 12355
Alignment:
Q  17 ggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc-nnnnnnnnacagggactataaccagaattcgttaatattacggagacgaaaa 115  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||         | |||||||| |||| ||||||| ||||||||| | ||||||||    
T  12248 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaaccggaattcgctaatattacagggacgaaaa 12347  T
Q  116 gaggtatt 123  Q
    ||||||||    
T  12348 gaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 8582 - 8634
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatc 63  Q
    ||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||    
T  8582 aatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatc 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 8378 - 8324
Alignment:
Q  75 gggactataaccagaattcgttaatattacggagacgaaaagaggtatttaccct 129  Q
    ||||||| ||||  |||||| ||||||||| | ||||||||||||||||||||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccct 8324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 3987 - 3868
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaatcnnnnnnnn-acagggactataaccagaattcgttaatattacggaga 109  Q
    |||||| |||||| ||| ||||||| ||||||||| |||| | ||||||||||         |||||||||| |||| ||||||| ||||||||| | ||    
T  3987 aatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggga 3888  T
Q  110 cgaaaagaggtatttaccct 129  Q
    ||||||||| ||||||||||    
T  3887 cgaaaagagatatttaccct 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 5008 - 5059
Alignment:
Q  11 aatgagggaccaaaagtagaagaatctgaaattacggggataaaatctaaat 62  Q
    ||||||||||||||||| ||||||||| ||||||| ||||  ||||||||||    
T  5008 aatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaat 5059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University