View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2964_high_49 (Length: 332)
Name: NF2964_high_49
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2964_high_49 |
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Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 85228 - 84903
Alignment:
| Q |
1 |
aaatgtttgctagaatccgtgcataaaatcatgttatttctttatagccatctttgccaaattctattagaattataatttaattgccaaatgcaatcac |
100 |
Q |
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| T |
85228 |
aaatgtttgctagaatccgtgcataaaatcatgttatttctttatagccatctttgccaaattctattagaattataatttaattgccaaatgcaatcac |
85129 |
T |
|
| Q |
101 |
aaaatttaacatatcttacaaaagcaagcaacccaatttggcttacctagcagacacatctgtttgttgtcaattctaggttattttatttacacgatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
85128 |
aaaatttaacatatcttacaaaagcaagcaacccaatttggcttacctagcagacacatctgtttgttgtcaattctaggttattttatttacacgatta |
85029 |
T |
|
| Q |
201 |
catcacagttagtgctggattcttgtgctgttttcttttgtatattttnnnnnnnttttctttaatcgaatgaaatcaattgtaatttttatttcaataa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
85028 |
catcacagttagtgctggattcttgtgctgttttcttttgtatattttcccccccttttctttaatcgaatgaaatcaattgtaatttttatttcaataa |
84929 |
T |
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| Q |
301 |
tatatttcccatgcacaggttctgct |
326 |
Q |
| |
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||||||||||||||||||| |||||| |
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| T |
84928 |
tatatttcccatgcacaggctctgct |
84903 |
T |
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