View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2964_high_59 (Length: 283)
Name: NF2964_high_59
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2964_high_59 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 3306703 - 3306433
Alignment:
| Q |
13 |
catcatgatagaacatatcagttattgaatgttatgcaagagttggaatcacagtttgaaaagttgataaaaaatcaaaagggtttcatcaaagccttat |
112 |
Q |
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| T |
3306703 |
catcatgatagaacatatcagttattgaatgttatgcaagagttggaatcacagtttgaaaagttgataaaaaatcaaaagggtttcatcaaagccttat |
3306604 |
T |
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| Q |
113 |
atagttggttaaaattgaatcttacccttattgagagtgatacaacgaaaaagatttcttcgccacccttacaaatccttcttcatgcttggaatgatca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3306603 |
atagttggttaaaattgaatcttacccttattgagagtgatacaacgaaaaagatttcttcgccacccttacaaatccttcttcatgcttggaatgatca |
3306504 |
T |
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| Q |
213 |
tctagagaaacttcctgatgaacatgctagaatagccttatcacatttcgctgccgtggtagattctcttt |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3306503 |
tctagagaaacttcctgatgaacatgctagaatagccttatcacatttcgctgccgtggtagattctcttt |
3306433 |
T |
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