View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2964_high_64 (Length: 276)
Name: NF2964_high_64
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2964_high_64 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 260
Target Start/End: Original strand, 9108826 - 9109075
Alignment:
| Q |
11 |
aatgagccaatacaatattctcaatttcaatttcatattgagataagatttgagttcacactaacttgttgacgtcgaacttggtacacaatacaaggtt |
110 |
Q |
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| T |
9108826 |
aatgagccaatacaatattctcaatttcaatttcatattgagataagatttgagttcacactaacttgttgacgtcgaacttggtacacaatacaaggtt |
9108925 |
T |
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| Q |
111 |
caaatcaacgatatcttcgtaggaataagtagagtaaattggacaaggaaattattatatttgacaagtgtcgtttcttaactgaagaacagttggagaa |
210 |
Q |
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| T |
9108926 |
caaatcaacgatatcttcgtaggaataagtagagtaaattggacaaggaaattattatatttgacaagtgccgtttcttaactgaagagcagttggagaa |
9109025 |
T |
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| Q |
211 |
ggaaattattatatttgattctgaataaaatatgtaatgtcaaaatgatg |
260 |
Q |
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| T |
9109026 |
ggaaattattatatttgattctgaataaaatctgtaaggtcaaaatgatg |
9109075 |
T |
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