View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2964_low_7 (Length: 678)

Name: NF2964_low_7
Description: NF2964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2964_low_7
NF2964_low_7
[»] chr7 (24 HSPs)
chr7 (9-662)||(47456815-47457468)
chr7 (13-289)||(48058463-48058727)
chr7 (195-324)||(3478325-3478454)
chr7 (82-330)||(13311806-13312054)
chr7 (172-302)||(12480881-12481012)
chr7 (170-330)||(46133230-46133392)
chr7 (170-294)||(9428059-9428183)
chr7 (195-323)||(1320768-1320897)
chr7 (170-330)||(36449051-36449211)
chr7 (202-420)||(11379112-11379338)
chr7 (170-330)||(38485523-38485682)
chr7 (65-329)||(9107131-9107393)
chr7 (48-124)||(33739444-33739521)
chr7 (170-287)||(6716691-6716807)
chr7 (228-286)||(38306272-38306330)
chr7 (228-286)||(47325897-47325955)
chr7 (227-319)||(16828947-16829039)
chr7 (82-179)||(12546272-12546370)
chr7 (227-330)||(16954620-16954723)
chr7 (228-287)||(35745839-35745898)
chr7 (227-313)||(24324809-24324895)
chr7 (228-284)||(10244195-10244251)
chr7 (347-427)||(13311701-13311781)
chr7 (211-287)||(34389972-34390048)
[»] chr4 (21 HSPs)
chr4 (13-463)||(38929659-38930111)
chr4 (13-462)||(28966702-28967150)
chr4 (25-256)||(21983630-21983861)
chr4 (253-465)||(21987963-21988175)
chr4 (13-427)||(12296038-12296459)
chr4 (171-330)||(35800457-35800615)
chr4 (197-427)||(46698765-46699002)
chr4 (195-330)||(19673068-19673202)
chr4 (172-292)||(16501736-16501858)
chr4 (213-306)||(25753163-25753256)
chr4 (168-330)||(53823373-53823535)
chr4 (168-330)||(21387156-21387318)
chr4 (168-319)||(22811112-22811263)
chr4 (204-286)||(6599932-6600015)
chr4 (170-330)||(19815174-19815338)
chr4 (168-292)||(2061690-2061814)
chr4 (228-287)||(8255037-8255096)
chr4 (228-287)||(8268455-8268514)
chr4 (213-300)||(49747524-49747611)
chr4 (228-284)||(30964454-30964510)
chr4 (213-273)||(41117964-41118024)
[»] chr2 (33 HSPs)
chr2 (13-462)||(15126207-15126656)
chr2 (13-424)||(22884932-22885347)
chr2 (65-327)||(16959952-16960214)
chr2 (25-292)||(33788441-33788708)
chr2 (189-429)||(4471785-4472031)
chr2 (36-398)||(29487024-29487391)
chr2 (171-285)||(2062901-2063015)
chr2 (213-313)||(1269467-1269567)
chr2 (168-294)||(10173529-10173656)
chr2 (82-315)||(25504773-25505008)
chr2 (171-330)||(27739942-27740101)
chr2 (170-319)||(16952336-16952486)
chr2 (170-319)||(17023001-17023151)
chr2 (170-319)||(17060307-17060457)
chr2 (195-427)||(18680929-18681167)
chr2 (195-287)||(13337284-13337376)
chr2 (228-286)||(39338877-39338935)
chr2 (13-103)||(2063067-2063153)
chr2 (195-275)||(3745356-3745437)
chr2 (195-319)||(17079147-17079272)
chr2 (228-300)||(14405195-14405267)
chr2 (196-276)||(27880110-27880189)
chr2 (341-423)||(3745227-3745309)
chr2 (253-319)||(14566424-14566490)
chr2 (170-287)||(34230211-34230328)
chr2 (170-275)||(7695985-7696089)
chr2 (341-409)||(2062789-2062857)
chr2 (355-427)||(25505055-25505127)
chr2 (228-287)||(387183-387242)
chr2 (65-115)||(4472104-4472155)
chr2 (13-51)||(15360961-15360999)
chr2 (196-318)||(37770622-37770743)
chr2 (170-231)||(12793685-12793745)
[»] chr1 (22 HSPs)
chr1 (13-454)||(19598479-19598920)
chr1 (56-427)||(50589046-50589423)
chr1 (151-427)||(17033449-17033734)
chr1 (170-330)||(4651747-4651906)
chr1 (227-307)||(38544749-38544829)
chr1 (170-287)||(27102201-27102318)
chr1 (143-312)||(42374148-42374318)
chr1 (189-286)||(5389393-5389491)
chr1 (228-330)||(46814479-46814581)
chr1 (234-323)||(9313307-9313396)
chr1 (170-321)||(34774847-34774998)
chr1 (228-279)||(24449942-24449993)
chr1 (228-279)||(30685916-30685967)
chr1 (228-330)||(27031852-27031954)
chr1 (228-286)||(31585772-31585830)
chr1 (228-286)||(41920463-41920521)
chr1 (228-286)||(46692831-46692889)
chr1 (170-287)||(27905422-27905534)
chr1 (231-275)||(40933885-40933929)
chr1 (343-401)||(32864696-32864754)
chr1 (341-423)||(42374030-42374112)
chr1 (242-279)||(36132758-36132795)
[»] chr5 (19 HSPs)
chr5 (13-462)||(27712904-27713349)
chr5 (13-460)||(22675118-22675564)
chr5 (142-427)||(39184111-39184405)
chr5 (154-427)||(31721541-31721820)
chr5 (175-427)||(24072226-24072484)
chr5 (171-302)||(13954189-13954320)
chr5 (170-427)||(7391991-7392249)
chr5 (82-315)||(8730899-8731134)
chr5 (170-330)||(14302384-14302544)
chr5 (151-330)||(17854001-17854181)
chr5 (170-318)||(7195194-7195341)
chr5 (168-267)||(8297498-8297597)
chr5 (171-311)||(39024397-39024545)
chr5 (239-305)||(23426336-23426402)
chr5 (196-279)||(25658131-25658216)
chr5 (359-427)||(8730780-8730848)
chr5 (168-279)||(21402789-21402900)
chr5 (228-287)||(34378108-34378167)
chr5 (213-287)||(25992017-25992091)
[»] chr6 (15 HSPs)
chr6 (13-461)||(13098368-13098815)
chr6 (170-326)||(32935293-32935449)
chr6 (153-302)||(26534652-26534805)
chr6 (170-294)||(9224044-9224169)
chr6 (13-189)||(16180696-16180875)
chr6 (170-287)||(26215973-26216090)
chr6 (172-300)||(21266110-21266238)
chr6 (170-330)||(20701757-20701917)
chr6 (172-300)||(21264983-21265111)
chr6 (170-275)||(13423488-13423593)
chr6 (343-427)||(9223905-9223988)
chr6 (227-402)||(33968624-33968806)
chr6 (170-243)||(15120551-15120624)
chr6 (13-114)||(15944201-15944298)
chr6 (84-123)||(33968482-33968522)
[»] chr3 (21 HSPs)
chr3 (43-462)||(47945539-47945963)
chr3 (168-302)||(1652838-1652972)
chr3 (172-300)||(5556567-5556696)
chr3 (205-427)||(30935379-30935608)
chr3 (227-313)||(14193924-14194010)
chr3 (227-311)||(14879421-14879505)
chr3 (25-124)||(25594340-25594439)
chr3 (194-330)||(25594498-25594634)
chr3 (213-279)||(37123400-37123466)
chr3 (170-410)||(823388-823636)
chr3 (228-287)||(19176512-19176571)
chr3 (228-286)||(17550968-17551026)
chr3 (227-311)||(25647670-25647754)
chr3 (211-279)||(39021271-39021339)
chr3 (228-275)||(2392518-2392565)
chr3 (228-275)||(2394265-2394312)
chr3 (170-287)||(33143902-33144020)
chr3 (228-287)||(43012385-43012444)
chr3 (173-249)||(27399006-27399083)
chr3 (71-122)||(27399137-27399189)
chr3 (227-286)||(30127273-30127333)
[»] scaffold0499 (1 HSPs)
scaffold0499 (13-454)||(6402-6842)
[»] chr8 (14 HSPs)
chr8 (84-426)||(17720573-17720921)
chr8 (13-320)||(15906663-15906970)
chr8 (213-330)||(30236125-30236242)
chr8 (170-324)||(35062430-35062584)
chr8 (213-319)||(10552247-10552352)
chr8 (170-279)||(17656956-17657065)
chr8 (170-279)||(41791218-41791327)
chr8 (195-279)||(32945682-32945766)
chr8 (213-320)||(12198066-12198173)
chr8 (213-320)||(12442494-12442601)
chr8 (228-286)||(24995407-24995465)
chr8 (228-286)||(31207374-31207432)
chr8 (228-277)||(16457473-16457522)
chr8 (227-275)||(10248564-10248612)
[»] scaffold0200 (1 HSPs)
scaffold0200 (170-313)||(19367-19510)
[»] scaffold0119 (1 HSPs)
scaffold0119 (213-313)||(42135-42235)
[»] scaffold1613 (1 HSPs)
scaffold1613 (227-307)||(1028-1108)
[»] scaffold0050 (1 HSPs)
scaffold0050 (231-420)||(36577-36773)


Alignment Details
Target: chr7 (Bit Score: 557; Significance: 0; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 9 - 662
Target Start/End: Original strand, 47456815 - 47457468
Alignment:
Q  9 acatcatcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47456815 acatcatcaccacctaaaaacagaccccttcacgaaaccaccactgaaaaaacaaaatccataaccaccaattgccaccactcaacccaaaataaccccc 47456914  T
Q  109 tctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaaca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  47456915 tctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaagatcaattagcttccaccacctcacaacttccggaccaccgaaagaaca 47457014  T
Q  209 ccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |    
T  47457015 ccataaaagcccataactaaacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacctaatcagacgggca 47457114  T
Q  309 ccccttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatcc 408  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  47457115 ccccttacccccgatccaccagagaatgctagccaaacaagaatgcagccagacgccaactcccgatctcgaatcaaaagtatccggcccaccagaatcc 47457214  T
Q  409 aatacacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaaaatggaacaactaaaaaatgacataaatggagaggatcttagctcgc 508  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47457215 agcacacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaaaatagaacaactaaaaaatgacataaatggagaggatcttagctcgc 47457314  T
Q  509 aatatcctccccttcaatttgnnnnnnngtccatatgaatagtgctttgctgaatgattattgtagttgtcaaaccataatactcatacatacgtattgg 608  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47457315 aatatcctccccttcaatttgtttttttgtccatatgaatagtgctttgctgaatgattattgtagttgtcaaaccataatactcatacatacgtattgg 47457414  T
Q  609 aaaacaagataatatgatgtactctagtgaagtttttacaatttgggtttttct 662  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  47457415 aaaacaagataatatgatggactctagggaagtttttacaatttgggtttttct 47457468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 13 - 289
Target Start/End: Original strand, 48058463 - 48058727
Alignment:
Q  13 catcaccacctaaaaa--cagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctc 110  Q
    ||||||||||||||||  ||||||||||| | ||||||||||| ||||||     |||||||||||| || | ||||||||||||||||||||||||       
T  48058463 catcaccacctaaaaaaacagaccccttctcgaaaccaccactaaaaaaa-----tccataaccacccatcgtcactactcaacccaaaataacccc--- 48058554  T
Q  111 taaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacc 210  Q
          |||||||| || ||| ||||||||  |||| ||||||||||| ||| ||| | |||||||||||||||||| ||| |||||||||||||||| |    
T  48058555 ------aaacactcaagccgcgtcccataagttgagccactattctaaagatcaatcagcttccaccacctcacaacctccagaccaccgaaagaacaac 48058648  T
Q  211 ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttca 289  Q
    ||||||| ||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  48058649 ataaaaggccaaaaccaaacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagacttca 48058727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 3478454 - 3478325
Alignment:
Q  195 ccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacc 294  Q
    |||||||||||||||||  |||||||| |||||| |||||||||||||||| ||| || ||||| ||||||||| |||||||||| || |||| ||||||    
T  3478454 ccaccgaaagaacaccaacaaagcccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggacc 3478355  T
Q  295 caatcagacgggaaccccttacccccgatc 324  Q
     || |||| ||| |||||| ||||||||||    
T  3478354 aaaacagaagggcacccctcacccccgatc 3478325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 82 - 330
Target Start/End: Complemental strand, 13312054 - 13311806
Alignment:
Q  82 gccactactcaacccaaaataaccccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacct 181  Q
    |||||||| || |||||||||| | |||||||||||||||||     | | || | ||| ||||| |||||||||||  || ||| | || |||||||||    
T  13312054 gccactacacaccccaaaataaacacctctaaatgaaacacttcgtcctcgtcacctaagctgagacactattctaaatatcaatcagctcccaccacct 13311955  T
Q  182 cacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatc 281  Q
    | |||| ||  | ||| ||||||||| ||| || ||||||  ||  ||||||| |||||||||||||| || ||||| ||||||||| |||||||||| |    
T  13311954 ctcaacctctagtccatcgaaagaacgccaaaacagcccaacacctaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccacc 13311855  T
Q  282 agacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    ||||| || |||| || |||||||| |||||||| ||||| ||||||||    
T  13311854 agactacatgaccaaaccagacgggcaccccttatccccggtccaccag 13311806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 12481012 - 12480881
Alignment:
Q  172 tccaccacctcacaacttccggaccaccgaaagaacacc-ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcg 270  Q
    ||||||||| |||||  ||| | |||||||||||||||| | ||||||| | ||| |||||||| |||||||||||||| || ||||| |||||||||||    
T  12481012 tccaccaccgcacaatctccagtccaccgaaagaacacctaaaaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcg 12480913  T
Q  271 atcggcccatcagacttcaggacccaatcaga 302  Q
    ||||||||| || ||||||||||  |||||||    
T  12480912 atcggcccaccaaacttcaggacaaaatcaga 12480881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 46133230 - 46133392
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataa-ctaaacttgagccaaagaactgacttccaatctcaaatcaaaa 267  Q
    ||||| ||||| | |||| ||||| |||||||| |||||||| |||| ||||| || | |||||||| ||| |||||||||| || ||||||||||||||    
T  46133230 cttcccccaccacgcaacctccggtccaccgaaggaacaccaaaaaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaa 46133329  T
Q  268 gcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    ||||||||| || |||||||||| ||| ||||||| ||| || ||| ||| ||| ||||||||    
T  46133330 gcgatcggctcaccagacttcagcaccaaatcagaagggcactcctaacctccggtccaccag 46133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 9428059 - 9428183
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    |||||||||| ||||||| || || ||||||||||||||||| || ||||||  || ||||| || || |||||||||||||  ||||| |||||||||     
T  9428059 cttccaccacttcacaacctctggtccaccgaaagaacaccaaaacagcccaagaccaaactagaaccgaagaactgacttctgatctcgaatcaaaagt 9428158  T
Q  270 gatcggcccatcagacttcaggacc 294  Q
    ||||||| || |||||| |||||||    
T  9428159 gatcggctcaccagactacaggacc 9428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 1320897 - 1320768
Alignment:
Q  195 ccaccgaaagaacaccataaaa-gcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcagga 292  Q
    |||||||||||| ||||||||| ||||| ||| ||| ||||||||||||||||||||||| || |  ||||||||| |||||||||| ||||||| | ||    
T  1320897 ccaccgaaagaa-accataaaaagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatga 1320799  T
Q  293 cccaatcagacgggaaccccttacccccgat 323  Q
    || ||||| | ||| |||||| |||||||||    
T  1320798 ccaaatcaaaagggcacccctcacccccgat 1320768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 170 - 330
Target Start/End: Complemental strand, 36449211 - 36449051
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataa-aagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |||| ||||  |||||||||||| |||| || ||| ||| |||  ||||||| |||||||||||||| | |||||| ||| ||||     
T  36449211 cttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaatctcgaataaaaa- 36449113  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    ||||  |||||  |||||||| || | ||||||| ||| |||||| ||||||||||||||||    
T  36449112 cgataagcccactagacttcaagatcaaatcagaagggcacccctcacccccgatccaccag 36449051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 202 - 420
Target Start/End: Original strand, 11379112 - 11379338
Alignment:
Q  202 aagaacaccataaaagcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatca 300  Q
    |||||||||| ||||||||| ||| ||| ||||| |||||| ||||||| || ||||| ||||||||||||||||| || |||||| || |||| ||| |    
T  11379112 aagaacaccaaaaaagcccaaaaccaaaacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaatta 11379211  T
Q  301 gacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatcc 393  Q
    || ||| |||||  |||| || |||||||| |||        | || |||||||||| || ||| |||| |||||||| ||| | ||||||||| || ||    
T  11379212 gaagggcaccccaaaccctcggtccaccagagaaacaccgtagtcagccaaacaagattgtagctagacaccaactcccgatcttgaatcaaaaataacc 11379311  T
Q  394 ggcccaccagaatccaatacacaaaaa 420  Q
    | ||||| ||||||||  |||||||||    
T  11379312 gacccactagaatccagcacacaaaaa 11379338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 330
Target Start/End: Complemental strand, 38485682 - 38485523
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    |||||||||||   |||| ||||| ||| |||| |||||||| ||||||||| ||| ||||| || ||| | | |||||| || ||||| |||||||||     
T  38485682 cttccaccaccgtgcaacctccggtccatcgaaggaacaccaaaaaagcccaaaaccaaactagaaccagata-ctgactcccgatctcgaatcaaaagt 38485584  T
Q  270 gatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    |||||||||| |||||||||| ||  | ||||| ||| |||||||||||||  ||||||||    
T  38485583 gatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccag 38485523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 329
Target Start/End: Complemental strand, 9107393 - 9107131
Alignment:
Q  65 atccataaccaccaattgccactactcaacccaaaataac-cccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggatt 163  Q
    ||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| | |  | |||| |  ||  |||| ||||||||||| | |     
T  9107393 atccataaccacccatcgccactactcatcccaaaataactcccctctaaatgaaacac-ccatcctcatcaccaaagttgagccactattctaaagttc 9107295  T
Q  164 aattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatc 263  Q
    |   ||| ||||||||||| |||| |||   ||||||||||||||| | ||||||||| ||  ||||||||   ||| || ||| |||| || || ||||    
T  9107294 acccaacatccaccacctctcaacctccttcccaccgaaagaacacaaaaaaagccca-aaaaaaacttga-aaaaaaaattgatttccgatgtcgaatc 9107197  T
Q  264 aaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccacca 329  Q
    ||||| ||||| |||| ||||||||| |||| ||| | |||||||||| | ||||| | |||||||    
T  9107196 aaaagagatcgtcccaccagacttcatgaccaaatgatacgggaacccatcacccctggtccacca 9107131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 33739521 - 33739444
Alignment:
Q  48 accactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaa-taaccccctctaaatgaaacactc 124  Q
    ||||||||| |||| | |||||||||| || || ||||||||||||| ||||| ||||||||||||||||||||||||    
T  33739521 accactgaataaacgatatccataacctcctatcgccactactcaactcaaaaataaccccctctaaatgaaacactc 33739444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 6716691 - 6716807
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaag-cccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| | ||||| |  |||||||||||| |||||||||  ||||  || ||||||||||||||||||||||| || ||||| |||||||||    
T  6716691 cttccaccacctctcgacttc-gatccaccgaaagaa-accataaaaaacccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaag 6716788  T
Q  269 cgatcggcccatcagactt 287  Q
     |||||||| | |||||||    
T  6716789 tgatcggccaaccagactt 6716807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 38306330 - 38306272
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||||||||| ||||||    
T  38306330 aacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagact 38306272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 47325897 - 47325955
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| |||||| |||||| || |||||||||||||||||||||||||| ||||||    
T  47325897 aacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagact 47325955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 16828947 - 16829039
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
    ||||||||| |||||||||||||| | ||||| || |||||| |||| ||| | ||||||| |||||| ||||||| ||| |||||| |||||    
T  16828947 aaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccc 16829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 12546272 - 12546370
Alignment:
Q  82 gccactactcaacccaaaataac-cccctctaaatgaaacactcgagtcg-catcccataaactgagtcactattctaaggattaattaacttccaccac 179  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||  |||| |||| | ||| ||||| ||||||||||| ||| ||| ||||||||||||    
T  12546272 gccactacttatcccaaaataacacccctctaaatgaaacactcc-gtcgtcatcacctaagctgagccactattctaaagatcaatcaacttccaccac 12546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 227 - 330
Target Start/End: Complemental strand, 16954723 - 16954620
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatcca 326  Q
    ||||||||| |||||||||||||| | ||||| || |||||| |||||| | | ||||||| |||||| ||||||| ||| |||||| ||| | ||| ||    
T  16954723 aaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgataca 16954624  T
Q  327 ccag 330  Q
    ||||    
T  16954623 ccag 16954620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 35745839 - 35745898
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||||||||||  |||||||| ||||| ||||||||| |||| |||||||||||||    
T  35745839 aacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactt 35745898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 313
Target Start/End: Original strand, 24324809 - 24324895
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccct 313  Q
    ||||||||||||||||| ||||| || ||||| ||||||||  |||||||||| || |||| | |||| ||||||| ||| ||||||    
T  24324809 aaacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccct 24324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 10244251 - 10244195
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcaga 284  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||    
T  10244251 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccaga 10244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 13311781 - 13311701
Alignment:
Q  347 aagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    ||||||||||  |||| |||||||| ||| |||||  |||||||  |||||||||||||||||  |||||||| |||||||    
T  13311781 aagaatgcagttagacaccaactcccgatctcgaaggaaaagtactcggcccaccagaatccagcacacaaaatgtaagac 13311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 34390048 - 34389972
Alignment:
Q  211 ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    ||||||||||| ||   ||||| ||||||||| |||||| || ||||| ||||||||| |||||||||| |||||||    
T  34390048 ataaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 34389972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 13 - 463
Target Start/End: Complemental strand, 38930111 - 38929659
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctcta 112  Q
    ||||||||||||  || | |||||||||| |||||||||||||||||||||||| |||||||||  || | |||||||||||||||||||||||||| |     
T  38930111 catcaccacctacgaataaaccccttcacgaaaccaccactgaaaaaacaaaattcataaccacacatcgtcactactcaacccaaaataaccccctttg 38930012  T
Q  113 aatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccat 212  Q
    |||||||||||  ||||| |||||||||  ||||| ||||||| || ||| ||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  38930011 aatgaaacacttcagtcgtatcccataagttgagtgactattccaaagatcaatcaacttccaccacctcacaacctccggatcaccgaaagaacaccat 38929912  T
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    ||||||||| ||  |||||||||||||||||||||||    ||||| ||||||||| |||||||||| ||||||||||||||||| |||||||| |||||    
T  38929911 aaaagcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccagacgggcacccc 38929812  T
Q  313 ttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaata 412  Q
    ||||||||| |||||||| |||||||||||||||||||||  ||| | ||||||||| | ||| ||||| |||||||| ||||||||||||||||||  |    
T  38929811 ttacccccggtccaccagagaatgccaaccaaacaagaatagagctaaacgccaacttccgatctcgaagcaaaagtaaccggcccaccagaatccagca 38929712  T
Q  413 cacaaaaagtaagactgcggtggttcatac--atcaatcaaaaaggaacaaaa 463  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||||||    
T  38929711 cacaaaaagtaagattgcggtggttcatacatatcaatcaagaaggaacaaaa 38929659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 462
Target Start/End: Complemental strand, 28967150 - 28966702
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataacc-ccctct 111  Q
    |||| |||||||||||| || || ||||| ||||||||||| |||||||| |||||||||||||  || ||||||||||| |||||||||||| |||| |    
T  28967150 catcgccacctaaaaac-gaacctttcacgaaaccaccact-aaaaaacataatccataaccactcatcgccactactcagcccaaaataacctcccttt 28967053  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacca 211  Q
    ||||||||||||| || ||| ||||||||  |||| ||||||||||  ||| ||| | |||||||||||||||||| |||||||||||||||||||| |     
T  28967052 aaatgaaacactccagccgcgtcccataagatgagccactattctagagatcaatcagcttccaccacctcacaacctccggaccaccgaaagaacatcc 28966953  T
Q  212 taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||| |||||| || | |||||||||||||||||  |||||||  ||     
T  28966952 taaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagacttcaggacccaactagacgggcgcca 28966853  T
Q  312 cttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaat 411  Q
    |||||||||| |||||  | ||||| || ||||||  ||||||||| ||||||||||| | ||| ||||| | |||||| ||||||||||||||||||      
T  28966852 cttacccccggtccacttgagaatgtcagccaaacctgaatgcagctagacgccaacttccgatctcgaagccaaagtaaccggcccaccagaatccagc 28966753  T
Q  412 acacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaaa 462  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  28966752 acactaaaagtaagactgcggtggtgcaaacatcaatcaaaaaggaacaaa 28966702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 21983630 - 21983861
Alignment:
Q  25 aaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctctaaatgaaacactc 124  Q
    |||||| ||||| |||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  21983630 aaaacaaaccccctcactaaacccccacggaaaaaacaaaatccataaccacccattgccactactcaacccaaaataaccccttttaaatgaaacactc 21983729  T
Q  125 gagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataa 224  Q
     ||||||||||| ||| ||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21983730 cagtcgcatcccctaagctgagtcactattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaagcccataa 21983829  T
Q  225 ctaaacttgagccaaagaactgacttccaatc 256  Q
    ||||||||||||||||||||||||| ||||||    
T  21983830 ctaaacttgagccaaagaactgactcccaatc 21983861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 253 - 465
Target Start/End: Original strand, 21987963 - 21988175
Alignment:
Q  253 aatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaatgccaaccaaacaagaat 352  Q
    |||||| ||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  21987963 aatctcgaatcaaaagcgatcggttcatcagacttcaggacccaaccagacgggcaccccttacccccggtccaccagagaatgccagccaaacaagaat 21988062  T
Q  353 gcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagactgcggtggttcatacatcaatcaaa 452  Q
    ||||| |||| |||||||||||| ||||| |||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  21988063 gcagctagacaccaactcctgatctcgaaacaaaagtaaccggcccaccagaattcagcacacaaaaagtaagactgcggtggttcatacatcaatcaaa 21988162  T
Q  453 aaggaacaaaatg 465  Q
    |||||||||||||    
T  21988163 aaggaacaaaatg 21988175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 13 - 427
Target Start/End: Complemental strand, 12296459 - 12296038
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataac-cccctct 111  Q
    ||||||||||||||||||||| ||||  | || | |||||||||||| | | ||||||||||||| || ||||||||||| ||||||||||| |||||||    
T  12296459 catcaccacctaaaaacagactcctttccgaagcgaccactgaaaaa-cgatatccataaccacccatcgccactactcatcccaaaataacacccctct 12296361  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacca 211  Q
    |||||||||||||    | |||| | |||  |||| ||||| ||||| ||  ||  | ||||||||||| |||||| ||||| |||||||||||||||||    
T  12296360 aaatgaaacactccgtcctcatcacctaagttgagccactactctaaagaacaaccagcttccaccaccacacaacctccggtccaccgaaagaacacca 12296261  T
Q  212 taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
     ||||||||| ||  |||||||| |||||||||||||||   ||||| ||||||||||| ||||| || |||||||||||||| || |||| ||| ||||    
T  12296260 aaaaagcccaaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcaccc 12296161  T
Q  312 cttacccccgatccaccagggaat-------gccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccaga 404  Q
    |||||||||| ||||| || | ||       || | ||||| ||||||||||| ||||||||||||| ||| ||||| ||||||||  ||||||||||||    
T  12296160 cttacccccggtccactagaggatcaccgtagctagccaaataagaatgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccaga 12296061  T
Q  405 atccaatacacaaaaagtaagac 427  Q
    |||||  |||||| | |||||||    
T  12296060 atccagcacacaatatgtaagac 12296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 171 - 330
Target Start/End: Complemental strand, 35800615 - 35800457
Alignment:
Q  171 ttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcg 270  Q
    |||||||||| |  ||| ||||| ||||||||||||||||| ||||||||| ||| ||||| ||  |||||||||||||||| ||||| |||||||||||    
T  35800615 ttccaccaccgcgaaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcg 35800516  T
Q  271 atcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    |||||  || |||||||||| ||| ||||||| ||| ||| |||| ||||||||||||||    
T  35800515 atcggttcaccagacttcagaaccaaatcagaagggcaccactta-ccccgatccaccag 35800457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 427
Target Start/End: Original strand, 46698765 - 46699002
Alignment:
Q  197 accgaaagaacaccataaaagcccataa-ctaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggaccc 295  Q
    ||||||||||||||  || |||||| || | |||||||| |||||||||||||| || ||||| |||||||||| ||||||||| |||||| |||||||     
T  46698765 accgaaagaacacctaaacagcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggacca 46698864  T
Q  296 aatcagacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaag 388  Q
    ||||||| ||| |||||  |||| || |||||||  |||        ||  ||||||||||| |||||| |||| |||||||| ||| ||||| ||||||    
T  46698865 aatcagaagggcaccccacaccctcggtccaccaaagaaactctgtagcttaccaaacaagactgcagctagacaccaactcccgatctcgaagcaaaag 46698964  T
Q  389 tatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    ||  ||||||| |||||||||  |||||| | |||||||    
T  46698965 taatcggccca-cagaatccagcacacaatatgtaagac 46699002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 195 - 330
Target Start/End: Complemental strand, 19673202 - 19673068
Alignment:
Q  195 ccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacc 294  Q
    |||||||||||||||||  ||| |||| ||||||||||||||||||||||||||| |  ||||| ||| ||||| ||  || ||| ||||||| ||||||    
T  19673202 ccaccgaaagaacaccaacaaaacccaaaactaaacttgagccaaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggacc 19673104  T
Q  295 caatcagacgggaaccccttacccccgatccaccag 330  Q
     || |||| ||| |||||| |||||||||| |||||    
T  19673103 aaaacagaagggcacccctcacccccgatcaaccag 19673068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 16501858 - 16501736
Alignment:
Q  172 tccaccacctcacaacttccggaccaccgaaagaa-cacc-ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||| |||||  ||||| |||||||||||| |||| | ||||||||| ||| ||||| || ||||||| |||||| || ||||| ||||||||||    
T  16501858 tccaccaccgcacaatctccggtccaccgaaagaaacacctaaaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagc 16501759  T
Q  270 gatcggcccatcagacttcagga 292  Q
    |||||||||| || |||||||||    
T  16501758 gatcggcccaccaaacttcagga 16501736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 25753256 - 25753163
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacggg 306  Q
    ||||||||| ||  ||||||||||||||||||||||| || ||||| ||||||||| ||||| |||| ||||||| |||||| ||| |||||||    
T  25753256 aaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacggg 25753163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 330
Target Start/End: Original strand, 53823373 - 53823535
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaag-cccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||| | || | ||  | |||||||||| |||||||||  |||| ||| ||||||||||||||||||||||| || ||||| |||||||    
T  53823373 aacttccaccacctctcgaccttcgatcaaccgaaagaa-accataaaaaacccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaa 53823471  T
Q  267 agcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    || ||| || ||| ||||||| | |||| ||||||| ||| |||||| ||| ||| | ||||||    
T  53823472 agtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacaccag 53823535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 330
Target Start/End: Original strand, 21387156 - 21387318
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaa 267  Q
    |||||||| ||| || |||| ||||| |||| ||| |||||||| |  |||||| |   ||||||||  | |||||||||||||| ||||| ||||||||    
T  21387156 aacttccatcacatctcaacctccggtccactgaacgaacaccaaattagcccaaataaaaacttgaatcgaagaactgacttccgatctcgaatcaaaa 21387255  T
Q  268 gcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    | |||||| ||| |||||| ||| ||| ||||||| ||| |  ||| ||||||||||||||||    
T  21387256 gtgatcggtccaccagactccagcaccaaatcagaagggtattcctcacccccgatccaccag 21387318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 22811112 - 22811263
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||| |||| |||   ||| ||| |||| ||||||||| ||| | ||| ||||||||||||||||||||||| || ||||| ||| |||    
T  22811112 aacttccaccacctctcaacctccaatccatcgagagaa-accataaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaa 22811210  T
Q  267 agcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
    |  |||||||||| ||||||| | |||| ||||||| ||| || ||| |||||    
T  22811211 aatgatcggcccaccagactttaagaccaaatcagaagggcactcctcacccc 22811263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 6599932 - 6600015
Alignment:
Q  204 gaacaccataaa-agcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||||||| |||||| ||| ||||||||  |||||||| |||| || ||||| |||||||||||||||||||| ||||||    
T  6599932 gaacaccataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagact 6600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 19815174 - 19815338
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaa----acttgagccaaagaactgacttccaatctcaaatcaa 265  Q
    ||||||||| ||| | || ||||| |||||||||||||||||   || |||| ||||||    ||||||||||||||||||||| |  ||||| ||| ||    
T  19815174 cttccaccatctctcgacctccggtccaccgaaagaacaccaatcaaacccaaaactaattaaacttgagccaaagaactgactcctgatctcgaataaa 19815273  T
Q  266 aagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    |||  ||||| ||| ||||||| |||||| || |||| ||| |||||| ||||||| || |||||    
T  19815274 aagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaaccag 19815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 2061690 - 2061814
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccat-aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||| | || ||||  |||||||||||| | ||| ||||||||| ||  |||  ||| ||||||||||||||  ||||||| |||||||    
T  2061690 aacttccaccacctctcgacctccgatccaccgaaagaa-atcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaatctcgaatcaaa 2061788  T
Q  267 agcgatcggcccatcagacttcagga 292  Q
    || |||| ||||| ||||||| ||||    
T  2061789 agtgatcagcccaccagactttagga 2061814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 8255096 - 8255037
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||| |||||||||||||||  |||||  |||||||| |||||||||| |||||||    
T  8255096 aacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactt 8255037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 8268514 - 8268455
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||| |||||||||||||||  |||||  |||||||| |||||||||| |||||||    
T  8268514 aacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactt 8268455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 49747611 - 49747524
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatca 300  Q
    |||||| || ||| |||||||| | ||||||||||||  | ||||||||||||||| ||||||| || ||||||| || ||| |||||    
T  49747611 aaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatca 49747524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 30964510 - 30964454
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcaga 284  Q
    |||||||| |||||||| |||| || ||| | ||||||||| |||||||||||||||    
T  30964510 aacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcaga 30964454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 41117964 - 41118024
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatc 273  Q
    ||||||||| |||  || ||||||||||||||| |||||| ||||| ||||||||| ||||    
T  41117964 aaaagcccaaaacctaatttgagccaaagaacttacttccgatctcgaatcaaaagtgatc 41118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 235; Significance: 1e-129; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 13 - 462
Target Start/End: Original strand, 15126207 - 15126656
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccc-cctct 111  Q
    |||||||||||||||||| || | ||||| |||||||| || ||||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||    
T  15126207 catcaccacctaaaaacaaactcgttcacgaaaccacccct-aaaaaacaaaatccataaccacccatcgccactacttaacccaaaataaccctcctct 15126305  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacca 211  Q
    ||||||||||||| || ||||||||||||   ||||||||||||||| ||| ||| |  ||||||||||||||||| |||||||||||||||||||||||    
T  15126306 aaatgaaacactccagccgcatcccataagacgagtcactattctaaagatcaataagtttccaccacctcacaacctccggaccaccgaaagaacacca 15126405  T
Q  212 taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    |||||||||| ||| |||| ||||||||||||| |||| || ||||| ||||||||  |||||||||| |||||||||||||||||  ||||||||||||    
T  15126406 taaaagcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacccaacgagacgggaaccc 15126505  T
Q  312 cttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaat 411  Q
    |||||||||| |||||||| ||| | |||||||||||||||||||| ||||||||||||| ||| ||||| |||||||| | | |||||||||||| |      
T  15126506 cttacccccggtccaccagagaaagacaaccaaacaagaatgcagctagacgccaactcccgatctcgaagcaaaagtaactgacccaccagaatctagc 15126605  T
Q  412 acacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaaa 462  Q
    ||||||||||||||| ||||||||| || || ||||| |||||||||||||    
T  15126606 acacaaaaagtaagattgcggtggtgcaaacgtcaataaaaaaggaacaaa 15126656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 13 - 424
Target Start/End: Original strand, 22884932 - 22885347
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataac-cccctct 111  Q
    ||||||||||||||| ||||| ||||||| |||| |||||||| ||| | |||||||||||| ||  | |||||| ||   ||||||||||| |||||||    
T  22884932 catcaccacctaaaa-cagactccttcacgaaacgaccactgacaaa-cgaaatccataacccccg-tcgccactgcttgtcccaaaataacacccctct 22885028  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacca 211  Q
    ||||||||||| |    | |||| | ||||  ||| ||||||||||  ||| ||| ||||||||||||||| |||| || || |||||||||||||||||    
T  22885029 aaatgaaacacaccgtcctcatcacctaaaacgagccactattctatagatcaatcaacttccaccacctctcaacctctggtccaccgaaagaacacca 22885128  T
Q  212 taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
     || | |||| ||| |||||||| |||||||||||||| || ||||| ||||||||| |||||||||| |||||||||||| | || ||| |||| ||||    
T  22885129 aaacaacccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttcaggatcaaaccag-cgggcaccc 22885227  T
Q  312 cttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccaga 404  Q
    || |||||| ||||||||| | |        |||  ||||||||| | ||||| |||| |||||||| ||| ||||| |||||||| ||||||||||||     
T  22885228 ctaacccccaatccaccagagcaacaccgtagcccgccaaacaaggaagcagctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccagc 22885327  T
Q  405 atccaatacacaaaaagtaa 424  Q
    |||||| |||||||| ||||    
T  22885328 atccaacacacaaaatgtaa 22885347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 65 - 327
Target Start/End: Complemental strand, 16960214 - 16959952
Alignment:
Q  65 atccataaccaccaattgccactactcaacccaaaataaccccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggatta 164  Q
    |||||||||| |  || |||||||||||||||||||||||  ||| || | ||| ||||    ||||||| | ||  ||||| || ||||| || ||  |    
T  16960214 atccataacctctcatcgccactactcaacccaaaataacttcctttataagaagcacttcgttcgcatcacctacgctgagccattattccaaagaaca 16960115  T
Q  165 attaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatca 264  Q
    || ||||||||||| |||||||| || || ||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||  | ||||| |||||    
T  16960114 atcaacttccaccagctcacaacctctggtccaccgaaagaacaccaaataagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatca 16960015  T
Q  265 aaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccac 327  Q
    ||||||||||||||| ||||||| ||||||| | || ||||| ||||||||||||| ||||||    
T  16960014 aaagcgatcggcccaccagactttaggaccctaccaaacgggcaccccttacccccaatccac 16959952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 25 - 292
Target Start/End: Original strand, 33788441 - 33788708
Alignment:
Q  25 aaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataac-cccctctaaatgaaacact 123  Q
    ||||||| | ||| ||| |||| |||||||| ||| |||||||||||||||||  | ||||||||||  ||||||||||| ||||||||||||||||||     
T  33788441 aaaacaggctcctccacgaaacaaccactgacaaa-caaaatccataaccacctgtcgccactactcgtcccaaaataacacccctctaaatgaaacacc 33788539  T
Q  124 cgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccata 223  Q
    |    | |||| | ||| ||||| ||||| ||||  ||| ||| | ||||||||||||| |||| || ||  |||||||||||||||| || | |||| |    
T  33788540 ccgtcctcatcacctaagctgagccactaatctatagatcaatcagcttccaccacctctcaacctctggttcaccgaaagaacaccaaaacaacccaaa 33788639  T
Q  224 actaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcagga 292  Q
     | |||| ||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  33788640 gccaaacctgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagacttcagga 33788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 189 - 429
Target Start/End: Complemental strand, 4472031 - 4471785
Alignment:
Q  189 tccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttc 288  Q
    ||||| ||||| |||||||||||  |||||||| ||  ||||||||  ||||||||||||| || ||||| ||||||| |||||||||||| |||||| |    
T  4472031 tccggtccaccaaaagaacaccaataaagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactcc 4471932  T
Q  289 aggacccaatcagacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaa 381  Q
    |||||| || ||||||||  ||||||||||||| |||||||| |||        | || |||||||| || | ||  ||||||||||||| ||| | |||    
T  4471931 aggaccaaaccagacggg-cccccttacccccggtccaccagagaaacactgtagtcagccaaacaataaagtagatagacgccaactcccgatcttgaa 4471833  T
Q  382 tcaaaagtatccggcccaccagaatccaatacacaaaaagtaagactg 429  Q
     |||||||| ||||||||||||||||||  |||||| |||||||||||    
T  4471832 gcaaaagtaaccggcccaccagaatccatcacacaataagtaagactg 4471785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 36 - 398
Target Start/End: Complemental strand, 29487391 - 29487024
Alignment:
Q  36 cttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctctaaatgaaacactcgagtcgcatcc 135  Q
    ||||||||||| ||| |||||||| ||| | ||||||||| |  | ||||||||||| ||| | |||| |||||||||||||||||| | |  |||| |     
T  29487391 cttcacaaaacgacccctgaaaaa-caatacccataaccagctgtcgccactactcatccccagataaacccctctaaatgaaacacaccatccgcaact 29487293  T
Q  136 cataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagccc-ataactaaacttga 234  Q
    | ||| | ||| |||||||| | | || ||| | ||||||||||| |||||| || || | |||||||||||| ||||| ||||| | ||| |||| |||    
T  29487292 cctaagccgagccactattccatgaatcaatcagcttccaccaccacacaacctctggtcaaccgaaagaacatcataacagcccaaaaaccaaacatga 29487193  T
Q  235 gccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaa 334  Q
     || |||||||||||  ||||||| ||||||||||||| || ||| ||||||||| || | || |||||||| |||||| ||||||  |||||||| |||    
T  29487192 accgaagaactgactatcaatctcgaatcaaaagcgattgg-ccaccagacttcaagatcaaaccagacgggcacccctaacccccagtccaccagagaa 29487094  T
Q  335 ------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggccc 398  Q
           |||  ||| ||||||| ||||| |||| |||||||| ||| ||||| |||||||| |||||||    
T  29487093 acaccgagcccgccagacaagaaagcagctagacaccaactcccgatctcgaagcaaaagtaaccggccc 29487024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 2063015 - 2062901
Alignment:
Q  171 ttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcg 270  Q
    |||||| |||||||||| || ||  |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||| || ||||| ||||||||||     
T  2063015 ttccacaacctcacaacctctggtacaccgaaagaacaccaaaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagca 2062916  T
Q  271 atcggcccatcagac 285  Q
    ||||||||| |||||    
T  2062915 atcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 1269567 - 1269467
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    |||| |||| ||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||  ||||||| ||| |||||    
T  1269567 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccc 1269468  T
Q  313 t 313  Q
    |    
T  1269467 t 1269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 10173529 - 10173656
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccat-aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||| | || ||||   ||||||||||||||||  ||||||||| ||| |||||||||||||| |||| |||||| ||||| |||||||    
T  10173529 aacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaa 10173628  T
Q  267 agcgatcggcccatcagacttcaggacc 294  Q
    || ||||||||||  |||||| ||||||    
T  10173629 agtgatcggcccactagactttaggacc 10173656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 25504773 - 25505008
Alignment:
Q  82 gccactactcaacccaaaataac-cccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacc 180  Q
    ||||||||||| ||||||||||| |||||||||||||||||    |  | |||| |  ||  |||| | |||||||||  || ||||| |||||||||||    
T  25504773 gccactactcatcccaaaataacacccctctaaatgaaacatcatatcctcatcaccaaagttgagccgctattctaaatatcaattagcttccaccacc 25504872  T
Q  181 tcacaacttccggaccaccgaaagaacaccataaaagcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||  ||| | ||| ||| ||||||||||||| ||||||||| ||| ||| | ||| |||||||||||||| || ||||| ||| ||||||||| || |||    
T  25504873 tctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtcca 25504972  T
Q  280 tcagacttcaggacccaatcagacgggaacccctta 315  Q
     |||||| || |||| ||||| | ||| ||||||||    
T  25504973 ccagactgcaagaccaaatcataagggcacccctta 25505008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 171 - 330
Target Start/End: Complemental strand, 27740101 - 27739942
Alignment:
Q  171 ttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcg 270  Q
    |||||||||||| |||| || || ||||||||||||||||| || | ||||  || |||||||| || ||  |||||||  | ||||  |||||||||||    
T  27740101 ttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaacccaagaccaaacttgaaccgaaacactgactctcgatcttgaatcaaaagcg 27740002  T
Q  271 atcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    ||||||||| |||||||||||||| |  |||| ||| |||||| ||||||  ||||||||    
T  27740001 atcggcccaccagacttcaggaccaatccagatgggcacccctaacccccagtccaccag 27739942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 319
Target Start/End: Original strand, 16952336 - 16952486
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |||| ||||  ||||||||||||||||| |||| | ||| ||| |||||||||||||||||||| || || ||||| ||||||||     
T  16952336 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaa 16952435  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
     |||||||  | ||| ||| |||| | | ||||| |||||||||| |||||    
T  16952436 agatcggcttagcagtctttaggaacaattcagaagggaacccctaacccc 16952486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 319
Target Start/End: Original strand, 17023001 - 17023151
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |||| ||||  ||||||||||||||||| |||| | ||| ||| |||||||||||||||||||| || || ||||| ||||||||     
T  17023001 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaa 17023100  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
     |||||||  | ||| ||| |||| | | ||||| |||||||||| |||||    
T  17023101 agatcggcttagcagtctttaggaacaattcagaagggaacccctaacccc 17023151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 319
Target Start/End: Original strand, 17060307 - 17060457
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |||| ||||  ||||||||||||||||| |||| | ||| ||| |||||||||||||||||||| || || ||||| ||||||||     
T  17060307 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaa 17060406  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
     |||||||  | ||| ||| |||| | | ||||| |||||||||| |||||    
T  17060407 agatcggcttagcagtctttaggaacaattcagaagggaacccctaacccc 17060457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 195 - 427
Target Start/End: Complemental strand, 18681167 - 18680929
Alignment:
Q  195 ccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacc 294  Q
    ||||| || |||||||| ||||||||| ||| |||||||| ||| |||||||||| || ||||| ||||||| || ||||||||| || ||||||  |||    
T  18681167 ccaccaaaggaacaccacaaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataacc 18681068  T
Q  295 caatcagacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaa 387  Q
     ||||||| ||| |  ||||||||||| ||||| || |||        | ||||||||||| || || || ||||||||||||| ||| ||||| ||||     
T  18681067 aaatcagaagggcagtccttacccccggtccactagagaaacaccgtagtcaaccaaacaataacgccgctagacgccaactcccgatctcgaagcaaat 18680968  T
Q  388 gtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    | ||  | |||| |||||||||| |||||| |||||||||    
T  18680967 ggat-tgacccatcagaatccaacacacaataagtaagac 18680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 13337376 - 13337284
Alignment:
Q  195 ccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||||||| ||||||||| | ||| |||  |||||||| |||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  13337376 ccaccgaaagaa-accataaaaagtccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactt 13337284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 39338877 - 39338935
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| |||||||||||||||||||| ||||||    
T  39338877 aacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact 39338935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 2063153 - 2063067
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataa 103  Q
    |||||||||||||||||     ||||||  |||| |||||||||||||| | |||||||||||   |||||||||||||||||||||||||    
T  2063153 catcaccacctaaaaact----ccttcaagaaacgaccactgaaaaaacgatatccataaccatacattgccactactcaacccaaaataa 2063067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 3745437 - 3745356
Alignment:
Q  195 ccaccgaaagaacaccataaaagcccataa-ctaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcgg 275  Q
    |||||||||||||| || ||||||||| || | |||||| | ||||||||||||||||| ||||| ||| ||||||||||||    
T  3745437 ccaccgaaagaacaacaaaaaagcccaaaaacaaaacttaaaccaaagaactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 17079272 - 17079147
Alignment:
Q  195 ccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggac 293  Q
    ||||||||||||||||| |||| | ||| ||| |||||||||||||||||||| || || ||||| ||||||||  |||||||  | ||| ||| ||||     
T  17079272 ccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaa 17079173  T
Q  294 ccaatcagacgggaaccccttacccc 319  Q
    | | ||||| |||||||||| |||||    
T  17079172 caattcagaagggaacccctaacccc 17079147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 14405267 - 14405195
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatca 300  Q
    ||||||||||||||| |||||| || ||||| ||||||||| |||||||||| ||||||| || ||| |||||    
T  14405267 aacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatca 14405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 27880110 - 27880189
Alignment:
Q  196 caccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggc 276  Q
    ||||||||||||| || || |||||| ||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||||||    
T  27880110 caccgaaagaacaacaaaacagccca-aaccaaacttgaaccaaataactgacttccgatctcgaatcaaaatcgatcggc 27880189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 3745309 - 3745227
Alignment:
Q  341 ccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagta 423  Q
    |||||| ||| |||||| ||||||||||||| ||| || ||  ||||||| ||||||||||||||||||  |||||| |||||    
T  3745309 ccaaacgagactgcagctagacgccaactcccgatctcaaagtaaaagtaaccggcccaccagaatccagcacacaataagta 3745227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 14566490 - 14566424
Alignment:
Q  253 aatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccc 319  Q
    |||||| ||||| || |||||| ||||||||||||||||||| || |||||||| |||||| |||||    
T  14566490 aatctcgaatcagaatcgatcgccccatcagacttcaggaccaaaccagacgggcacccctaacccc 14566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 34230328 - 34230211
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |||| ||||  |||||||||||| |||| |||| ||||| ||  |||||||| |||||||||||||| |  ||||| ||| ||||     
T  34230328 cttccaccacctctcaacctccgatccaccgaaagaa-accacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataaaaaa 34230230  T
Q  269 cgatcggcccatcagactt 287  Q
     ||||||||||||| ||||    
T  34230229 tgatcggcccatcaaactt 34230211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 7696089 - 7695985
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||||| | || | ||  |||||||||||| ||| |||||||||| |||  |||||||||||||||||||||| ||  | || |||||||||     
T  7696089 cttccaccacctcccgaccttcgatccaccgaaagaa-accgtaaaagcccaaaacctaacttgagccaaagaactgactcccggtatcgaatcaaaagt 7695991  T
Q  270 gatcgg 275  Q
    ||||||    
T  7695990 gatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 2062857 - 2062789
Alignment:
Q  341 ccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatcca 409  Q
    ||||||||||||||||| |||| |||||||| ||| ||||| ||||||||   |||||||||| |||||    
T  2062857 ccaaacaagaatgcagctagacaccaactcccgatctcgaagcaaaagtaattggcccaccagcatcca 2062789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 25505055 - 25505127
Alignment:
Q  355 agccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    ||| |||| |||||| ||||| ||||| ||||||||  |||||||||||||||||  |||||| |||||||||    
T  25505055 agctagacaccaacttctgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaataagtaagac 25505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 387242 - 387183
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||| ||||||| ||||| || ||||||||||||||| |||| ||||| |||||||    
T  387242 aacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactt 387183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 4472155 - 4472104
Alignment:
Q  65 atccataaccaccaattgccactactcaacccaaaataac-cccctctaaat 115  Q
    |||||||||||||||| |||||||  |||||||||||||| |||||||||||    
T  4472155 atccataaccaccaatcgccactagacaacccaaaataacacccctctaaat 4472104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 15360999 - 15360961
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccacca 51  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  15360999 catcaccacctaaaaacataccccttcacgaaaccacca 15360961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 37770622 - 37770743
Alignment:
Q  196 caccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggaccc 295  Q
    ||||||||||| |||||||||||||| ||| ||| |||| | |||||| ||||| |  |||   ||||||||| |||||||||| || || | ||||||     
T  37770622 caccgaaagaa-accataaaagcccaaaaccaaaattgatctaaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggacca 37770720  T
Q  296 aatcagacgggaaccccttaccc 318  Q
    ||||||| ||| |||||| ||||    
T  37770721 aatcagatgggcacccctcaccc 37770743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 12793685 - 12793745
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaact 231  Q
    ||||||||||| |||||| ||||| |||| ||| |||||||||||||||||| ||| |||||    
T  12793685 cttccaccaccgcacaacctccggtccac-gaaggaacaccataaaagcccaaaaccaaact 12793745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 454
Target Start/End: Complemental strand, 19598920 - 19598479
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccc-tct 111  Q
    |||||||||||||||| |||  ||||||| ||||||||||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||| |||    
T  19598920 catcaccacctaaaaatagattccttcacgaaaccaccact-aaaaaacaaaatccataaccatccatcgccactactcaacccaaaataacccccctct 19598822  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacca 211  Q
    ||| ||||||||| || || |||||||||  |||| |  |||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19598821 aaaagaaacactctagccgtatcccataagttgagccgttattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacacca 19598722  T
Q  212 taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    ||||| |||| ||  ||||||||| |||||||||||||  | ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  19598721 taaaaacccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccc 19598622  T
Q  312 cttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaat 411  Q
    ||||||| || |||||||| ||||| || |||| ||| |||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||      
T  19598621 cttaccctcggtccaccagagaatgtcagccaagcaaaaatgcagctagacgccaacttctgatctcgaagcaaaagtaaccggcccaccagagtccagc 19598522  T
Q  412 acacaaaaagtaagactgcggtggttcatacatcaatcaaaaa 454  Q
    ||||||||||||||||||||||||| || |||||||| |||||    
T  19598521 acacaaaaagtaagactgcggtggtgcaaacatcaataaaaaa 19598479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 56 - 427
Target Start/End: Original strand, 50589046 - 50589423
Alignment:
Q  56 aaaaacaaaatccataaccaccaattgccactactcaacccaaaa-taaccccctctaaatgaaacactcgagtc-gcatcccataaactgagtcactat 153  Q
    |||||| | |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||| | |||  ||||  |||||    
T  50589046 aaaaacgatatccataacctcccattgccactactcaacccaaaaataaccccctctaaatgaaacactcc-gtctgcatcacctaagttgagctactat 50589144  T
Q  154 tctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttcca 253  Q
    || || ||| ||| |||||| ||||||||||||| || || ||||||||||||||| | | ||||||| ||| ||||||| |||||||||||| || ||     
T  50589145 tccaaagatcaatcaacttctaccacctcacaacctctggtccaccgaaagaacactaaataagcccaaaaccaaacttgggccaaagaactggctcccg 50589244  T
Q  254 atctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaa-----tgccaaccaaacaa 348  Q
    || || |||||||||||||| ||||| | ||||||||||||||| |||||||| |||||||||||||  |||||||| |||      |||| ||||||||    
T  50589245 atttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcaccccttacccccagtccaccagagaaaccgtagccagccaaacaa 50589344  T
Q  349 gaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    ||| ||||| ||||||||| ||| ||| ||||| ||||| || ||||||||||||||||||  |||||| | |||||||    
T  50589345 gaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatccagcacacaatatgtaagac 50589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 151 - 427
Target Start/End: Complemental strand, 17033734 - 17033449
Alignment:
Q  151 tattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaa-cttgagccaaagaactgac 248  Q
    |||||||| ||| ||| | ||| || ||||||| ||| || ||| | |||||||||||| | |||| ||||| ||| ||| ||||| |||||||||||||    
T  17033734 tattctaaagatcaatcagcttgcatcacctcataacctcaggatcgccgaaagaacacaaaaaaaagcccaaaaccaaaacttgaaccaaagaactgac 17033635  T
Q  249 ttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaat-------gccaac 341  Q
    | || ||||| | ||||||| |||||||||| ||||||  |||||| ||||||| ||| ||||| ||| | || | |||||  ||||       | || |    
T  17033634 tcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccctactctcggttcaccatagaatcaccgtagtcagc 17033535  T
Q  342 caaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    ||||||||| |||| | ||||||||| ||  ||| ||||| |||||||| ||||||||||||||||||  |||||| |||||||||    
T  17033534 caaacaagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaataagtaagac 17033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 330
Target Start/End: Complemental strand, 4651906 - 4651747
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||| | |||| ||||| |||||||| |||||||| ||||||||| ||| ||||| || ||| || ||||||| || ||||| |||||||||     
T  4651906 cttccaccaccgcgcaacctccggtccaccgaaggaacaccaaaaaagcccaaaaccaaactagaaccagag-actgactcccgatctcgaatcaaaagt 4651808  T
Q  270 gatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    |||||||||  |||||||| | ||  | ||||| ||| |||||||||||||| | ||||||    
T  4651807 gatcggccccccagacttcggaacaaattcagaagggcaccccttacccccggtacaccag 4651747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 38544749 - 38544829
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacggga 307  Q
    |||||| | |||||||||||||| || ||||| |||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  38544749 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggga 38544829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 27102318 - 27102201
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| | || ||||  |||||||||||| ||| ||||| ||||| ||| |||||||| |||||||||||||| || ||||| |||||||||    
T  27102318 cttccaccacctctcgacctccgatccaccgaaagaa-accgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaag 27102220  T
Q  269 cgatcggcccatcagactt 287  Q
     ||||||||| | ||||||    
T  27102219 tgatcggcccgttagactt 27102201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 312
Target Start/End: Complemental strand, 42374318 - 42374148
Alignment:
Q  143 tgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaa-cttgagccaaag 241  Q
    |||| ||||||||||| ||| ||| | ||||||||||||| |||  |||||    |||||||||| ||| | ||||||| ||| ||| ||||| |||||     
T  42374318 tgagccactattctaaagatcaatcagcttccaccacctctcaatctccggtatgccgaaagaacgccaaacaagcccaaaaccaaaacttgaaccaaaa 42374219  T
Q  242 aactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
     ||||||| || |||||||||||||||||||||| ||| |||||  || |||| ||||||| ||| |||||    
T  42374218 gactgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccc 42374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 5389393 - 5389491
Alignment:
Q  189 tccggaccaccgaaagaacaccata-aaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||| |||||||||||| ||| | | |||||||| ||  ||||||||| ||||||||||||| || ||||| ||||||||| ||||||||| |||||||    
T  5389393 tccgaaccaccgaaagagcacaacacaaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagact 5389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 46814479 - 46814581
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccac 327  Q
    ||||||||||||| | |||||| || ||||| ||||||||| |||||||||| ||||||| || ||| ||||||  ||| ||||||| |||||| | |||    
T  46814479 aacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtacac 46814578  T
Q  328 cag 330  Q
    |||    
T  46814579 cag 46814581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 9313307 - 9313396
Alignment:
Q  234 agccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgat 323  Q
    |||||||||||||||| || ||||| ||||||||| |||| |||||  |||||| |||||| ||||||| ||| |||||| || ||||||    
T  9313307 agccaaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgat 9313396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 34774998 - 34774847
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagcc-aaagaactgacttccaatctcaaatcaaaa 267  Q
    ||||||||||||| |||| |||    ||||||||||| ||||||||| ||||| ||||||||||||||| ||| |||||||| || |||||  |||||||    
T  34774998 cttccaccacctctcaacctccaattcaccgaaagaa-accataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctc-gatcaaaa 34774901  T
Q  268 gcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccg 321  Q
    | |||||| ||| ||||| | |||||| ||||||| ||| ||| || |||||||    
T  34774900 gtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcacccccg 34774847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 24449942 - 24449993
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||||| || |||||||||||||||| ||||||||||||||| ||||||||||    
T  24449942 aacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggccca 24449993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 30685916 - 30685967
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    |||||||| ||||||||||||| || ||||||||||||||| ||||||||||    
T  30685916 aacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggccca 30685967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 27031852 - 27031954
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccac 327  Q
    ||||||||||||||| ||||||  | ||||| ||||||||| ||||||||||  |||||| || ||| ||||||  ||| ||||||| |||||| | |||    
T  27031852 aacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacac 27031951  T
Q  328 cag 330  Q
    |||    
T  27031952 cag 27031954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 31585772 - 31585830
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||||    
T  31585772 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 31585830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 41920521 - 41920463
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||||    
T  41920521 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 41920463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 46692831 - 46692889
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||||||||||||| ||| || ||||| ||||||||| |||||||||| ||||||    
T  46692831 aacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagact 46692889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 287
Target Start/End: Complemental strand, 27905534 - 27905422
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||||| |||| ||||| ||||||||  ||||||||   |||||| ||| |||| |||  ||||||||| |||||  ||||| |||||||||     
T  27905534 cttccaccacctctcaacctccggtccaccgaa--aacaccat---agcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagt 27905440  T
Q  270 gatcggcccatcagactt 287  Q
    |||||| ||| |||||||    
T  27905439 gatcggtccaccagactt 27905422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 40933929 - 40933885
Alignment:
Q  231 ttgagccaaagaactgacttccaatctcaaatcaaaagcgatcgg 275  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  40933929 ttgaaccaaataactgacttccgatctcaaatcaaaagcgatcgg 40933885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 32864696 - 32864754
Alignment:
Q  343 aaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccacc 401  Q
    |||||||| || ||| |||| || ||||||||||||||| |||||||| ||||||||||    
T  32864696 aaacaagattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccacc 32864754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 42374112 - 42374030
Alignment:
Q  341 ccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagta 423  Q
    |||||||||| |||| | |||| |  ||||| ||| |||||||||||||| |||| |||||||||| ||| |||||| |||||    
T  42374112 ccaaacaagattgcaactagacactgactcccgatctcgaatcaaaagtaaccggtccaccagaatacaacacacaataagta 42374030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 36132758 - 36132795
Alignment:
Q  242 aactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  36132758 aactgacttccgatctcaaatcaaaagcgatcgaccca 36132795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 462
Target Start/End: Complemental strand, 27713349 - 27712904
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccc--tc 110  Q
    ||||||| |||||||||| |||||||||| |||||||||||   ||||| ||||||||||||    || |||||||||||||||||||||||||||  ||    
T  27713349 catcaccgcctaaaaacaaaccccttcacgaaaccaccact---aaaactaaatccataaccc---atcgccactactcaacccaaaataaccccccctc 27713256  T
Q  111 taaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacc 210  Q
    |||||||||||||| || ||||||||||||  |||| ||||||||||| ||| ||| |  ||||||||||| ||||| ||  |||||||||||||||| |    
T  27713255 taaatgaaacactccagccgcatcccataagttgagccactattctaaagatcaataagtttccaccacctgacaacctctagaccaccgaaagaacaac 27713156  T
Q  211 ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacc 310  Q
    ||||||||||| ||| ||||||||||||||||||||| | || ||||| |||||||| |||||||||||  |||||||||||||||| |||||||| | |    
T  27713155 ataaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagacttcaggacccaaccagacgggcaac 27713056  T
Q  311 ccttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaa 410  Q
    ||||| ||||  |||||||| |||||||||||||||||||||||| | ||||||||||||| ||  ||||| |||||||| |||||||| |||||||||     
T  27713055 ccttatccccagtccaccagagaatgccaaccaaacaagaatgcatctagacgccaactcccgacctcgaagcaaaagtaaccggcccatcagaatccag 27712956  T
Q  411 tacacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaaa 462  Q
     ||||||||||||||||||| ||||| || | ||||||||||||||||||||    
T  27712955 cacacaaaaagtaagactgcagtggtgcaaatatcaatcaaaaaggaacaaa 27712904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 13 - 460
Target Start/End: Original strand, 22675118 - 22675564
Alignment:
Q  13 catcaccacctaaaaacagacccc-ttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccc-tc 110  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||  || ||||||||| |||| |||||||||||| ||    
T  22675118 catcaccacctaaaaacagacccccttcacaaaaccagcactgaataaacaaaatccataaccactcatcgccactacttaaccgaaaataacccccctc 22675217  T
Q  111 taaatgaaaca-ctcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacac 209  Q
    ||||||||||| ||| || || ||||| |||  |||| ||||| ||||| ||| ||| |||||||||||||||||||| |||||||||| ||||||||||    
T  22675218 taaatgaaacaactccagccgaatcccttaagttgagccactagtctaaagatcaatcaacttccaccacctcacaacctccggaccactgaaagaacac 22675317  T
Q  210 cataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaac 309  Q
    ||| |||||||| ||| ||||||||||||||||||||||| || ||||| |||||||| ||||||| ||| ||||||| || ||||||  |||| | |      
T  22675318 cattaaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttagaacccaactagac-gaata 22675416  T
Q  310 cccttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatcca 409  Q
    ||||||   ||| |||||||| |||||     ||||| | |||||||| ||||||||||||| | | ||||| |||||||| ||||||||||||||||||    
T  22675417 ccctta---ccggtccaccagagaatgttcgtcaaaccaaaatgcagctagacgccaactcccggtctcgaagcaaaagtaaccggcccaccagaatcca 22675513  T
Q  410 atacacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaaca 460  Q
    | ||||||||||||||| || ||||||||| |||||||| |||||| ||||    
T  22675514 acacacaaaaagtaagattgtggtggttcaaacatcaataaaaaagaaaca 22675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 142 - 427
Target Start/End: Original strand, 39184111 - 39184405
Alignment:
Q  142 ctgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaa--cttgagccaa 239  Q
    ||||| |||||||| || ||| ||| | ||||||| |||||||||| || || ||||||||||||||||| |||||| || ||| |||  ||||| ||||    
T  39184111 ctgagccactattcaaaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacaccaaaaaagctcaaaaccaaatgcttgaaccaa 39184210  T
Q  240 agaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaa----- 334  Q
    ||||||||||||| ||||| ||||||||| |||||||||| |||||  || || | ||||||| ||| |||||  |||  || | |||||| |||         
T  39184211 agaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcaccccaaaccgtcggttcaccagagaaacact 39184310  T
Q  335 --tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
       ||||||||||||||| |||| | ||||||||||||| ||| |||||||||||||| || |||||||||||||||  |||||| || ||||||    
T  39184311 gtcgccaaccaaacaagattgcaactagacgccaactcccgatctcgaatcaaaagtaacctgcccaccagaatccagcacacaataaataagac 39184405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 154 - 427
Target Start/End: Complemental strand, 31721820 - 31721541
Alignment:
Q  154 tctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttcca 253  Q
    ||||| ||| ||| ||||||||||||| | |||| ||||| |||| ||| |||||||| || | |||| ||| |||  ||| ||| |||||||||| ||     
T  31721820 tctaaagatcaatcaacttccaccaccgcgcaacatccggtccactgaaggaacaccaaaacaacccaaaaccaaaaatgaaccagagaactgactcccg 31721721  T
Q  254 atctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaac 346  Q
    ||||| ||||||||||||||||||||| ||||||||| |||  |||||| ||| |||||||||||||| |||||||| |||        |||||||||||    
T  31721720 atctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaaacatcgtagccaaccaaac 31721621  T
Q  347 aagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    || ||||| || ||| ||||||||| |||  |||| ||||| |  |||||||| |||||||||  |||||| |||||||||    
T  31721620 aataatgccgctagaagccaactcccgatcgcgaagcaaaa-tgaccggcccatcagaatccataacacaataagtaagac 31721541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 175 - 427
Target Start/End: Original strand, 24072226 - 24072484
Alignment:
Q  175 accacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcg 274  Q
    |||||||  |||| ||||| ||||||||||||||||| |||| |||  || | ||||||| ||||||||||||||||| ||||||||||||||||||||     
T  24072226 accacctttcaacctccggtccaccgaaagaacaccaaaaaaaccccaaa-tcaacttgaaccaaagaactgacttccgatctcaaatcaaaagcgatca 24072324  T
Q  275 gcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccagggaa-------tgccaaccaaacaagaatgcagccagacgccaa 367  Q
    ||| | ||||||| |||||| ||||||| ||| |||||  |||| || |||||||| |||        || | |||||||||| | |||| | |||||||    
T  24072325 gccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccaccagagaaacactgtagctatccaaacaagattacagctaaacgccaa 24072424  T
Q  368 ctcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    |||| ||| | ||| |||||||| ||||||||| ||||||||  |||||| | |||||||    
T  24072425 ctcccgatcttgaagcaaaagtaaccggcccactagaatccagcacacaacatgtaagac 24072484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 13954189 - 13954320
Alignment:
Q  171 ttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    |||||||||||  |||||||||  |||||||||||| ||||||||| ||||| ||| ||||||||||||||| | ||||| || ||||| |||||||||     
T  13954189 ttccaccacctttcaacttccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagt 13954287  T
Q  270 gatcggcccatcagacttcaggacccaatcaga 302  Q
    |||||||||| ||||||| |||||| |||||||    
T  13954288 gatcggcccaccagactttaggaccaaatcaga 13954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 427
Target Start/End: Original strand, 7391991 - 7392249
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    |||| |||||||| | || ||||  |||||||||||| |||||||||||||| ||| ||      ||||||||||||||| || ||||| |||||||||     
T  7391991 cttcaaccacctctcgacctccgatccaccgaaagaa-accataaaagcccaaaaccaat-----gccaaagaactgactcccgatctcgaatcaaaagt 7392084  T
Q  270 gatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag-ggaatgccaa------ccaaacaagaatgcagccagac 362  Q
    |||||| ||| ||||||| |||||| ||||||| ||| |||||| |||| || | || ||| | ||  ||||      |||||||||| |||||| ||||    
T  7392085 gatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaacaccaaatcaagccaaacaagattgcagctagac 7392184  T
Q  363 gccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
     |||||||| ||| ||||| |||||||| |||| ||| ||||  |||| ||||||||||||||||    
T  7392185 accaactcccgatctcgaagcaaaagtaaccggtccatcagataccaacacacaaaaagtaagac 7392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 8731134 - 8730899
Alignment:
Q  82 gccactactcaacccaaaataac-cccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacc 180  Q
    ||||||||||| ||||||||||| |||||||||||||||||    |  | |||| |  ||  |||| | |||||||||  || ||||| |||||||||||    
T  8731134 gccactactcatcccaaaataacacccctctaaatgaaacatcatatcctcatcaccaaagttgagccgctattctaaatatcaattagcttccaccacc 8731035  T
Q  181 tcacaacttccggaccaccgaaagaacaccataaaagcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||  ||| | ||| ||| ||||||||||||| ||||||||| ||| ||| | ||| |||||||||||||| || ||||| ||| ||||||||| || |||    
T  8731034 tctgaaccttcggtccatcgaaagaacaccaaaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtcca 8730935  T
Q  280 tcagacttcaggacccaatcagacgggaacccctta 315  Q
     |||||| || |||| ||||| | ||| ||||||||    
T  8730934 ccagactgcaagaccaaatcataagggcacccctta 8730899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 14302384 - 14302544
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| | || ||||  |||||||||||| ||||||||| ||||| ||| |||||||  |||||||||||||| |||||||| || ||||||    
T  14302384 cttccaccacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgctccaaagaactgactcccaatctcgaaccaaaag 14302482  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
     |||| | ||| ||||||| |||||| || |||| ||| | |||| |||| |||| ||||||    
T  14302483 tgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccag 14302544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 151 - 330
Target Start/End: Original strand, 17854001 - 17854181
Alignment:
Q  151 tattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataa-aagcccataacta-aacttgagccaaagaactgac 248  Q
    |||||||| ||| | | ||||||||||||||| ||||||| || ||||||||||||||  | || ||||||| || || ||||||| ||||| || ||||    
T  17854001 tattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaacattaaaataagccca-aagtagaacttgaaccaaataattgac 17854099  T
Q  249 ttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    | || ||||| | ||||||||| |||||||| || |||||| |||| ||| ||| ||| |||||| ||||||| ||||||||    
T  17854100 tcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccag 17854181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 7195194 - 7195341
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataacta-aacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||| ||||| | || ||||  ||||||||| || |||||||||||||| ||||  |||||||||||||||||||||| || ||||| |||||||||    
T  7195194 cttccacgacctctcgacctccgatccaccgaaaaaa-accataaaagccca-aactctaacttgagccaaagaactgactcccgatctcgaatcaaaag 7195291  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttaccc 318  Q
     ||||||| || ||||||| | | || ||||||| ||| |||||| ||||    
T  7195292 tgatcggctcaccagactttatggccaaatcagaagggcacccctcaccc 7195341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 8297597 - 8297498
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||||| || ||||   ||||||||||| ||||||||| | ||| ||| ||||||||||||||||||||||| || ||||| |||||||    
T  8297597 aacttccaccacctcacgacctccgattcaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaa 8297499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 311
Target Start/End: Original strand, 39024397 - 39024545
Alignment:
Q  171 ttccaccacctcacaacttccggaccaccgaaagaacaccata--------aaagcccataactaaacttgagccaaagaactgacttccaatctcaaat 262  Q
    |||||||||||| ||||||||   |||||||||||||||||||        ||| |||| ||| |||||||| |||||||| ||||| || ||||| |||    
T  39024397 ttccaccacctctcaacttccaatccaccgaaagaacaccataaaaaacccaaaacccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaat 39024496  T
Q  263 caaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    |||||||||| |  ||| || ||||||||||| | ||||| ||| ||||    
T  39024497 caaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 23426402 - 23426336
Alignment:
Q  239 aagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgg 305  Q
    ||||||||||| |||||||| ||||||||| | |||| ||| |||||||||||||| || |||||||    
T  23426402 aagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaaccagacgg 23426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 25658131 - 25658216
Alignment:
Q  196 caccgaaagaacaccataaa-agcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    |||||||||||||||||||| |||||| ||| ||| |||||   |||||||||||| ||| |||  ||||||||||||||||||||    
T  25658131 caccgaaagaacaccataaatagcccaaaacaaaaacttgaattaaagaactgactcccagtctagaatcaaaagcgatcggccca 25658216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 8730848 - 8730780
Alignment:
Q  359 agacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    |||| |||||| ||||| ||||| ||||||||  |||||||||||||||||  |||||| |||||||||    
T  8730848 agacaccaacttctgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaataagtaagac 8730780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 21402789 - 21402900
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaa 266  Q
    ||||||||||||||| |||| |||   |||||||||||| ||||||||| || || ||| |||| |||| ||||||||||||| || ||||| ||  |||    
T  21402789 aacttccaccacctctcaacctccaatccaccgaaagaa-accataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgatctcgaactaaa 21402887  T
Q  267 agcgatcggccca 279  Q
    || ||||||||||    
T  21402888 agtgatcggccca 21402900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 34378167 - 34378108
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||| | ||||||||||||| || ||||| ||||||||| |||||||||| |||||||    
T  34378167 aacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 34378108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 25992091 - 25992017
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    ||||||||| ||| || || |||| ||||||||||||  | ||||| ||||||||||||| |||||| |||||||    
T  25992091 aaaagcccaaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactt 25992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 461
Target Start/End: Original strand, 13098368 - 13098815
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctcta 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||     
T  13098368 catcaccacctaaaaacagaccccttcacaaaaccaccattgaaaaaacaaaatccataacaacccatcgccgctactcaacccaaaataaccccctctc 13098467  T
Q  113 aatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccat 212  Q
    | |||||||| | || |||||||| ||| ||||| ||||||||||| ||| ||| | |||||||| || |||||| ||| ||||||||||||||||| |     
T  13098468 agtgaaacacactagccgcatcccctaagctgagccactattctaaagatcaatcatcttccacctccacacaacctccagaccaccgaaagaacacaaa 13098567  T
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    ||||||| | ||| ||||||||||||||||||| ||| |||||||  ||||| ||| |||||   ||  |||||||||||| ||| |||| ||| |||||    
T  13098568 aaaagccaaaaaccaaacttgagccaaagaactaactcccaatcttgaatcagaagagatcgttgcactagacttcaggactcaaccagatgggcacccc 13098667  T
Q  313 ttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaata 412  Q
    ||| ||||| |||||||  |||| ||| ||| ||||||||||||| |||||||||||||  || ||||| |||||||| |||||||| |||||| ||  |    
T  13098668 tta-ccccggtccaccaaagaataccatccagacaagaatgcagctagacgccaactcccaatctcgaagcaaaagtaaccggcccatcagaatgcagca 13098766  T
Q  413 cacaaaaagtaagactgcggtggttcatacatcaatcaaaaaggaacaa 461  Q
    |||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  13098767 cacaaaaagtaagactgcggtggtacaaacatcaataaaaaacgaacaa 13098815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 32935293 - 32935449
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||||| |||| |  | |||||||||||||||| | ||||| ||| ||  ||||||||| | ||||||||||| || ||||| ||||||||||    
T  32935293 cttccaccacctcccaacctttgaaccaccgaaagaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatctcgaatcaaaagc 32935392  T
Q  270 gatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatcca 326  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| ||||||||||||    
T  32935393 gatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatcca 32935449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 26534652 - 26534805
Alignment:
Q  153 ttctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacacc-ataaaagcccataactaaacttgagccaaaga---actgac 248  Q
    |||||| ||| ||| | ||||||||||| |||||| | ||| |||||||||||||||| | ||||||||| ||| |||||||| |||||||   ||||||    
T  26534652 ttctaaagatcaatcagcttccaccaccgcacaaccttcggtccaccgaaagaacacctaaaaaagcccaaaaccaaacttgaaccaaagaagaactgac 26534751  T
Q  249 ttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcaga 302  Q
    | |||||||| ||||||||| |||||||||| |||||||||||||| |||||||    
T  26534752 tcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcaga 26534805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 9224169 - 9224044
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacacca-taaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||| |||||| |||||  |||||||||| ||||| |||||||||| ||| |||  ||| |||||||||||||| || ||||| |||||||||    
T  9224169 cttccaccaccgcacaacctccggtgcaccgaaagagcaccaataaaagcccaaaaccaaaactgaaccaaagaactgactcccgatctcgaatcaaaag 9224070  T
Q  269 cgatcggcccatcagacttcaggacc 294  Q
    ||||| ||||| ||||||| ||||||    
T  9224069 cgatcagcccaccagactttaggacc 9224044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 16180696 - 16180875
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatc----cataaccaccaattgccactactcaacccaaaataaccc-c 107  Q
    ||||||||||||||| ||||||||||||  |||||||| || |||||||||||||    |||||| | | |||||||| |||||||||||||||||   |    
T  16180696 catcaccacctaaaa-cagaccccttcaagaaaccacccct-aaaaaacaaaatctattcataactatccattgccaccactcaacccaaaataactttc 16180793  T
Q  108 ctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaactt 189  Q
    ||||||| ||||||||| || ||| | | | ||||||||||| |||| ||| ||| ||| | ||||||||||||||||||||    
T  16180794 ctctaaacgaaacactccagacgcgttctaaaaactgagtcattattttaaagatcaatcagcttccaccacctcacaactt 16180875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 26215973 - 26216090
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||| | |||  ||||| ||||| ||||||||||| ||||||||| ||| |||  ||| || ||||||||||| || ||||| |||||||||     
T  26215973 cttccaccaccgcgcaatctccggtccaccaaaagaacaccaaaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagt 26216072  T
Q  270 gatcggcccatcagactt 287  Q
    |||||||||| |||||||    
T  26216073 gatcggcccaccagactt 26216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 21266238 - 21266110
Alignment:
Q  172 tccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcga 271  Q
    ||||||||| |||||  || || ||||| |||||||||||  |||||||| ||| |||||||| ||| | |||| ||| || ||||| ||||||||||||    
T  21266238 tccaccaccgcacaatctctggtccaccaaaagaacaccaacaaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcga 21266139  T
Q  272 tcggcccatcagacttcaggacccaatca 300  Q
    |||||||| ||| ||| |||||| |||||    
T  21266138 tcggcccaccagtctttaggaccaaatca 21266110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 20701757 - 20701917
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||| ||||| | || ||||  |||||||||||| ||||||||| ||||| ||| |||||| |||||||||||| ||| || ||||| |||||||||    
T  20701757 cttccactacctctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaag 20701855  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
     ||||||| || ||| ||  | |||| ||||||| ||| |||||| ||||||| | ||||||    
T  20701856 tgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacaccag 20701917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 21265111 - 21264983
Alignment:
Q  172 tccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcga 271  Q
    ||||||||| |||||  ||||| ||| | |||||||||||  |||||||| ||| |||||||| ||| | |||| ||| || ||||| |||||||||| |    
T  21265111 tccaccaccgcacaatctccggtccatcaaaagaacaccaacaaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagcta 21265012  T
Q  272 tcggcccatcagacttcaggacccaatca 300  Q
    ||||||||  || |||||||||| |||||    
T  21265011 tcggcccactagtcttcaggaccaaatca 21264983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 275
Target Start/End: Complemental strand, 13423593 - 13423488
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccata-aaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||| |  | ||||| ||| |||||||| |||||| |||||||||||| |||||||||||||||||| ||||  | ||||| |||||||||    
T  13423593 cttccaccacctcgcggcctccggtccatcgaaagaa-accatataaagcccataaccaaacttgagccaaagaaccgactctcgatctcgaatcaaaag 13423495  T
Q  269 cgatcgg 275  Q
     ||||||    
T  13423494 tgatcgg 13423488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 9223988 - 9223905
Alignment:
Q  343 aaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagac 427  Q
    |||||||| |||||  |||| |||||||| ||| ||||| ||||| || |||||||||||| |||||  ||||||||||||||||    
T  9223988 aaacaagattgcagaaagacaccaactcccgatctcgaagcaaaa-taaccggcccaccagcatccatcacacaaaaagtaagac 9223905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 402
Target Start/End: Original strand, 33968624 - 33968806
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatcca 326  Q
    |||||||| |||||||||||||| || ||||| ||||||||||||||  ||||  ||||| ||  ||| ||||||| ||  ||||| ||||| || | ||    
T  33968624 aaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccataccctcggttca 33968723  T
Q  327 ccagggaa-------tgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccacca 402  Q
    |||| |||        ||||||||||||||||| |||  ||||||||||| | ||| ||| | |||||||| ||| |||||||    
T  33968724 ccagagaaacaccgtagccaaccaaacaagaatacagttagacgccaacttccgatctcggagcaaaagtaaccgacccacca 33968806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 15120551 - 15120624
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaa 243  Q
    ||||||||||||| | || ||||  ||||| |||||| ||||||||| ||||| |||||||||||||||||||||    
T  15120551 cttccaccacctctcgacctccgatccaccaaaagaa-accataaaaagcccaaaactaaacttgagccaaagaa 15120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 15944298 - 15944201
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctcta 112  Q
    ||||||||||||||| ||||| |||| || |||| || ||| |||||||| ||||||||| | |  ||||||||||| |||||||||||||| || ||||    
T  15944298 catcaccacctaaaa-cagactcctttacgaaacaactact-aaaaaacagaatccataaactc--attgccactacacaacccaaaataacaccttcta 15944203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 33968482 - 33968522
Alignment:
Q  84 cactactcaacccaaaataac-cccctctaaatgaaacact 123  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  33968482 cactactcatcccaaaataacacccctctaaatgaaacact 33968522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 43 - 462
Target Start/End: Complemental strand, 47945963 - 47945539
Alignment:
Q  43 aaaccaccactgaaaaaa-caaaatccataaccaccaattgccactactcaacccaaaataaccccctct--aaatgaaacactcgagtcgcatcccata 139  Q
    |||||||||| ||||||| |||| |||| ||||| | || |||||||  ||| |||||||||||||||||  ||||||||||||| ||  ||||||| ||    
T  47945963 aaaccaccaccgaaaaaaacaaagtccaaaaccatccatcgccactatacaagccaaaataaccccctctctaaatgaaacactccagctgcatccccta 47945864  T
Q  140 aactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaa 239  Q
    ||||||| |||||||| || ||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  47945863 aactgagccactattcaaaagatcaattaacttccaccacctcacaatctccggaccaccgaaagaacaccataaaagcccaaaatcaaacttgagccaa 47945764  T
Q  240 agaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttaccccc-gatccaccagggaatgcc 338  Q
    | |||||||| || ||||| ||||||||| |||||||||| | ||||| ||||||||| |||||||| ||||||||||||| | |||||||| |||||      
T  47945763 ataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcaccccttaccccctggtccaccagagaatgtt 47945664  T
Q  339 aaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaagactgcggtggttc 438  Q
    | |||||||||||||| || ||||||||||||| ||| ||||| | |||||| ||||| ||||||||||||  |||||||||||||| ||||||||||||    
T  47945663 agccaaacaagaatgctgctagacgccaactcccgatctcgaagctaaagtaaccggcacaccagaatccagcacacaaaaagtaaggctgcggtggttc 47945564  T
Q  439 -atacatcaatcaaaaaggaacaaa 462  Q
     | | ||||||||||||||||||||    
T  47945563 aaaatatcaatcaaaaaggaacaaa 47945539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 302
Target Start/End: Original strand, 1652838 - 1652972
Alignment:
Q  168 aacttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaa 267  Q
    ||||||| ||||| |  ||| ||||| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||| ||| |  ||||| ||||||||    
T  1652838 aacttccgccaccgcttaacctccggtccaccgaaagaacaccaaaaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaa 1652937  T
Q  268 gcgatcggcccatcagacttcaggacccaatcaga 302  Q
    | ||||||||||  ||| ||||||||| |||||||    
T  1652938 gtgatcggcccacaagagttcaggaccaaatcaga 1652972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 5556696 - 5556567
Alignment:
Q  172 tccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaa-cttgagccaaagaactgacttccaatctcaaatcaaaagcg 270  Q
    |||||||||||  ||| ||||| ||||||||||||||||  ||||||||| ||| ||| ||||| |||||||||||||| || ||||| |||||||||||    
T  5556696 tccaccacctctaaacctccggtccaccgaaagaacacctgaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcg 5556597  T
Q  271 atcggcccatcagacttcaggacccaatca 300  Q
    |||| |||| |||||| || |||| |||||    
T  5556596 atcgccccaccagactacaagaccaaatca 5556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 205 - 427
Target Start/End: Original strand, 30935379 - 30935608
Alignment:
Q  205 aacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacg 304  Q
    ||||||| |||||| || ||| |||||||| ||||| |||| ||| || ||||  |||||||||||||| ||||| || ||||||  ||| ||||||| |    
T  30935379 aacaccaaaaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaag 30935478  T
Q  305 ggaaccccttacccccgatccaccagggaa-------tgccaacc-aaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggc 396  Q
    || |||||||||||||| |||||||| |||        ||||||| |||||| ||||| || |||||||||||||  || ||||| ||||| || |||||    
T  30935479 ggcaccccttacccccggtccaccagagaaacactgtagccaaccaaaacaataatgccgctagacgccaactcccaatctcgaagcaaaa-taaccggc 30935577  T
Q  397 ccaccagaatccaatacacaaaaagtaagac 427  Q
    ||| |||||||||  |||||| |||||||||    
T  30935578 ccatcagaatccagcacacaacaagtaagac 30935608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 14194010 - 14193924
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccct 313  Q
    |||||||||||||||||| |||| |||||||| ||||||||| |||||| ||  ||||||| |||||| ||||||| ||| ||||||    
T  14194010 aaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccct 14193924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 14879505 - 14879421
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    |||||||| |||| |||| |||| || ||||| ||||||||| |||||||||| ||||||| |||||||||||||| ||| ||||    
T  14879505 aaacttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 25594340 - 25594439
Alignment:
Q  25 aaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataac-cccctctaaatgaaacact 123  Q
    |||||| || |||||||||||| |||||||||||||| | ||||| ||||||| || ||||||||||| ||||| ||||| | |||||||||| ||||||    
T  25594340 aaaacatactccttcacaaaacgaccactgaaaaaacgatatcca-aaccacccatcgccactactcatcccaagataacactcctctaaatggaacact 25594438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 194 - 330
Target Start/End: Original strand, 25594498 - 25594634
Alignment:
Q  194 accaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggac 293  Q
    ||||| |||||||||||| ||||||||| | | || ||||| |||||||| | |||||| ||||  ||||||||||||||  |||| ||||||| |||||    
T  25594498 accactgaaagaacaccaaaaaagcccaaagccaatcttgaaccaaagaattaacttccgatctagaatcaaaagcgatctacccaccagacttgaggac 25594597  T
Q  294 ccaatcagacgggaaccccttacccccgatccaccag 330  Q
    | ||  ||| ||| ||||| |||||||| ||| ||||    
T  25594598 caaaatagaagggcaccccatacccccggtccgccag 25594634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 37123466 - 37123400
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||||||||| ||| ||| |||| |||||||||||||| |||||||| ||||||||| ||||||||||    
T  37123466 aaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaaagtgatcggccca 37123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 410
Target Start/End: Original strand, 823388 - 823636
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataa-aagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||| ||||||| |||| || || | ||||||||||||||| || ||||||| ||| ||||||||   ||| ||||||||  | ||||| |||||||||    
T  823388 cttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcgatctcgaatcaaaag 823487  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccaggga------atgccaa-ccaaacaagaatgcagccaga 361  Q
     ||||||||||| || |||||  ||| |||  || ||| |||| |||||| || |||||||| ||      ||  ||| |||||||||| |||| | |||    
T  823488 tgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccaccagagaaacaccataacaagccaaacaagattgcaactaga 823587  T
Q  362 cgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaa 410  Q
    | |||||||||||| | ||| ||||| || |||| ||||||||||||||    
T  823588 caccaactcctgatcttgaagcaaaattaaccggtccaccagaatccaa 823636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 19176571 - 19176512
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| |||||||    
T  19176571 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 19176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 17551026 - 17550968
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||||    
T  17551026 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 17550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 25647754 - 25647670
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccc 311  Q
    |||||| |||||||||||  ||| || ||||| ||||||||| ||| ||||| |||||||| |||||| ||||||| ||| ||||    
T  25647754 aaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcaccc 25647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 39021271 - 39021339
Alignment:
Q  211 ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    ||||||||||| ||| | |||||| |||||||||||||| || | ||| ||||||||| ||||||||||    
T  39021271 ataaaagcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgatcggccca 39021339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 2392518 - 2392565
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcgg 275  Q
    ||||| || |||||||||||||||||||||| ||||||||| ||||||    
T  2392518 aacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcgg 2392565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 2394265 - 2394312
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcgg 275  Q
    ||||| || |||||||||||||||||||||| ||||||||| ||||||    
T  2394265 aacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcgg 2394312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 33143902 - 33144020
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataa-ctaaacttgagccaaagaactgacttccaatctcaaatcaaaa 267  Q
    ||||||||||||| | || || |  |||||||||||| ||||||||| ||||| || |||| ||||| |||||||||||||| || ||||| ||||||||    
T  33143902 cttccaccacctcgcgacctctgatccaccgaaagaa-accataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatctcgaatcaaaa 33144000  T
Q  268 gcgatcggcccatcagactt 287  Q
    | |||||  ||| |||||||    
T  33144001 gtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 43012444 - 43012385
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagactt 287  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||| ||| |||||||    
T  43012444 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactt 43012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 27399083 - 27399006
Alignment:
Q  173 ccaccacctcacaacttccggaccaccgaaagaacacc-ataaaagcccataactaaacttgagccaaagaactgact 249  Q
    |||||||||| |||| || || ||||| |||||||||| | ||||||||| ||| |||||||| ||||| ||||||||    
T  27399083 ccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgact 27399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 27399189 - 27399137
Alignment:
Q  71 aaccaccaattgccactactcaacccaaaataac-cccctctaaatgaaacac 122  Q
    ||||||| |||||||||||||| ||||||| ||| ||| ||||||||||||||    
T  27399189 aaccacccattgccactactcagcccaaaagaacacccgtctaaatgaaacac 27399137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 30127333 - 30127273
Alignment:
Q  227 aaacttgagccaa-agaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    ||||||||| ||| |||||||||| || ||||| ||||||||||||||||| || ||||||    
T  30127333 aaacttgagtcaagagaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 174; Significance: 3e-93; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 13 - 454
Target Start/End: Complemental strand, 6842 - 6402
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataaccccctcta 112  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||| |||||||||| ||||||| |||||||     
T  6842 catcaccacctaaaaacagaccccttcacaaaaccaccactaaaaaaacaaaatccataacaacctatcgccgctactcaacctaaaataatcccctctc 6743  T
Q  113 aatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaacaccat 212  Q
    | | |||||||| || |||||||| |||  |||| ||||||||||| ||  ||| | |||||||| || |||||| ||  ||||||||||||||||| |     
T  6742 agttaaacactctagccgcatcccctaagttgagccactattctaaagaccaatcatcttccacctccacacaacctctagaccaccgaaagaacacaaa 6643  T
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    ||||||| | ||| ||||||||||||||||||| ||| |||||||  ||||||||| |||||   || ||||||||||||| ||| |||| ||| |||||    
T  6642 aaaagccaaaaaccaaacttgagccaaagaactaactaccaatcttgaatcaaaagagatcgttgcaccagacttcaggactcaaccagatgggcacccc 6543  T
Q  313 ttacccccgatccaccagggaatgccaaccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaata 412  Q
    ||| || || ||||||||  ||||||| ||| ||||||||||||| |||| ||||||||  || || || |||||||| || ||||| |||||| ||| |    
T  6542 tta-cctcggtccaccagataatgccatccagacaagaatgcagctagacaccaactcccaatctcaaagcaaaagtaacctgcccatcagaatgcaaca 6444  T
Q  413 cacaaaaagtaagactgcggtggttcatacatcaatcaaaaa 454  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  6443 cacaaaaagtaagactgcggtggtacaaacatcaataaaaaa 6402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 4e-43; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 84 - 426
Target Start/End: Original strand, 17720573 - 17720921
Alignment:
Q  84 cactactcaacccaaaa-taaccccctctaaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctc 182  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||    | |||| | |||  |||| ||||||||||| ||| ||| |||||||||||||||    
T  17720573 cactactcaccccaaaaataaacccctctaaatgaaacactccgtcctcatcacttaatttgagccactattctaaagatcaatcaacttccaccacctc 17720672  T
Q  183 acaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatca 282  Q
     |||| ||  | ||||||||||||||||| || |||||| |||  || |||| |||||||||||||| || ||| | |||||||||||||| ||||| ||    
T  17720673 tcaacctcaagtccaccgaaagaacaccaaaacagcccaaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccacca 17720771  T
Q  283 gacttcaggacccaatcagacgggaaccccttacccccgatccaccag-ggaa-----tgccaaccaaacaagaatgcagccagacgccaactcctgatt 376  Q
     |||| |||||| || ||||| || |||||||||||| | |||||||| ||||      |||| ||||||||||||||||| | ||||||||||  |||     
T  17720772 tactttaggaccaaaccagacaggcaccccttacccctggtccaccagaggaacacggagccagccaaacaagaatgcagctatacgccaactctcgatc 17720871  T
Q  377 tcgaatcaaaagtatccggcccaccagaatccaatacacaaaaagtaaga 426  Q
    || || ||||||||  |||||||||||||||||  |||||||| ||||||    
T  17720872 tcaaagcaaaagtaatcggcccaccagaatccagcacacaaaatgtaaga 17720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 320
Target Start/End: Complemental strand, 15906970 - 15906663
Alignment:
Q  13 catcaccacctaaaaacagaccccttcacaaaaccaccactgaaaaaacaaaatccataaccaccaattgccactactcaacccaaaataacccc-ctct 111  Q
    |||||||||| ||||||||| |||||||| |||| |||||||||||| ||  ||||||||||||   ||||||||||||| ||||||||||| || ||||    
T  15906970 catcaccacc-aaaaacagatcccttcacgaaacgaccactgaaaaa-cagtatccataaccacatgttgccactactcatcccaaaataacacctctct 15906873  T
Q  112 aaatgaaacactcgagtcgcatcccataaactgagtcactattctaaggattaattaacttccaccacctcacaacttccggaccaccgaaagaa-cacc 210  Q
    |||| |||||| |    | |||| | |||  ||||  |||||||||   || ||| | |||||||||||||  ||| || || |||| ||||||| |||     
T  15906872 aaataaaacacactgtcctcatcacctaagttgagctactattctataaatcaatcatcttccaccacctcttaacctctggtccactgaaagaaacact 15906773  T
Q  211 ataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacc 310  Q
    | |  |||||| ||| |||||||| |||||||||||||| || ||||| ||||||| | |||||||||| |||||||||||||| || || ||||| |||    
T  15906772 aaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaaccaaacgggcacc 15906673  T
Q  311 ccttaccccc 320  Q
    | | ||||||    
T  15906672 cttaaccccc 15906663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 30236125 - 30236242
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    ||||||||| ||| |||||||| |||||||||||||| || ||||| ||||||||||||||| |||| |||||||||  ||| ||||||| ||| |||||    
T  30236125 aaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcacccc 30236224  T
Q  313 ttacccccgatccaccag 330  Q
    ||||||||| ||||||||    
T  30236225 ttacccccggtccaccag 30236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 35062584 - 35062430
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||| | |||| || |  |||||||| |||||||  ||||||||| ||| ||||| || | | ||||||||||  | ||||| |||||||| |    
T  35062584 cttccaccaccgcgcaacctctgatccaccgaaggaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcgatctcgaatcaaaatc 35062485  T
Q  270 gatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatc 324  Q
    |||||||||| |||||||||| ||| |||||||  || ||||||||||| |||||    
T  35062484 gatcggcccaccagacttcagaaccaaatcagagaggcaccccttaccctcgatc 35062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 10552352 - 10552247
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    |||||| || ||| ||||| || ||| |||||||||| || ||||  |||||||||||||||||||| |||||||||| ||| ||||||| ||| |||||    
T  10552352 aaaagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcaga-gggcacccc 10552254  T
Q  313 ttacccc 319  Q
    || ||||    
T  10552253 ttgcccc 10552247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 17656956 - 17657065
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||||||  | || ||||  |||||||||||| ||||||||| | ||| ||| ||||||||||||||||||||||| || ||||| |||||||||    
T  17656956 cttccaccacctatcgacctccgatccaccgaaagaa-accataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaag 17657054  T
Q  269 cgatcggccca 279  Q
     ||||| ||||    
T  17657055 tgatcgaccca 17657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 41791218 - 41791327
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagc 269  Q
    ||||||||||| | |||| ||  | ||| ||||| ||||||| ||||| ||| |||||||||||| |||||||| |||||  | ||||| ||||||||||    
T  41791218 cttccaccaccgcgcaacctctagtccatcgaaataacaccaaaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcgaatcaaaagc 41791317  T
Q  270 gatcggccca 279  Q
    ||||| ||||    
T  41791318 gatcgaccca 41791327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 32945682 - 32945766
Alignment:
Q  195 ccaccgaaagaacaccataaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggccca 279  Q
    |||||||||||||| || ||||||||| ||| ||||||||  ||||||| ||||| || ||||| ||||||||| |||| |||||    
T  32945682 ccaccgaaagaacatcaaaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagccca 32945766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 320
Target Start/End: Original strand, 12198066 - 12198173
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    |||||| || ||| ||||||||||||||||||||||| ||||| |  ||| ||||| |||||| ||| ||||||||| |||| ||| ||| | | || ||    
T  12198066 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcacacc 12198165  T
Q  313 ttaccccc 320  Q
    ||||||||    
T  12198166 ttaccccc 12198173  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 320
Target Start/End: Original strand, 12442494 - 12442601
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    |||||| || ||| ||||||||||||||||||||||| ||||| |  ||| ||||| |||||| ||| ||||||||| |||| ||| ||| | | || ||    
T  12442494 aaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcacacc 12442593  T
Q  313 ttaccccc 320  Q
    ||||||||    
T  12442594 ttaccccc 12442601  T

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Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 24995407 - 24995465
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||||    
T  24995407 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 24995465  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 31207374 - 31207432
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagact 286  Q
    |||||||| ||||||||||||| || ||||| ||||||||| |||||||||| ||||||    
T  31207374 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 31207432  T

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Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 16457473 - 16457522
Alignment:
Q  228 aacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcc 277  Q
    |||||||| ||||||||||||| || ||||| ||||||||| ||||||||    
T  16457473 aacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcc 16457522  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 10248564 - 10248612
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcgg 275  Q
    ||||||||||||||||||||||| || ||||  ||||||||| ||||||    
T  10248564 aaacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcgg 10248612  T

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Target: scaffold0200 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 170 - 313
Target Start/End: Complemental strand, 19510 - 19367
Alignment:
Q  170 cttccaccacctcacaacttccggaccaccgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaag 268  Q
    ||||||||| ||| | || ||||  |||||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||    
T  19510 cttccaccaactctcgacctccgatccaccgaaagaa-accataaaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaag 19412  T
Q  269 cgatcggcccatcagacttcaggacccaatcagacgggaacccct 313  Q
     |||||||||| ||||||| |||||| ||||||| ||| ||||||    
T  19411 tgatcggcccaccagactttaggaccaaatcagaagggcacccct 19367  T

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Target: scaffold0119 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 42135 - 42235
Alignment:
Q  213 aaaagcccataactaaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaacccc 312  Q
    |||| |||| ||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||  ||||||| ||| |||||    
T  42135 aaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccc 42234  T
Q  313 t 313  Q
    |    
T  42235 t 42235  T

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Target: scaffold1613 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 1028 - 1108
Alignment:
Q  227 aaacttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacggga 307  Q
    |||||| | |||||||||||||| || ||||| |||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  1028 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggga 1108  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 420
Target Start/End: Complemental strand, 36773 - 36577
Alignment:
Q  231 ttgagccaaagaactgacttccaatctcaaatcaaaagcgatcggcccatcagacttcaggacccaatcagacgggaaccccttacccccgatccaccag 330  Q
    ||||| ||||||||||||| || ||||| ||||||||| |||| ||||  ||||||| |||||| ||||||| ||| |||||| || | || | ||||||    
T  36773 ttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccag 36674  T
Q  331 -ggaatgccaa------ccaaacaagaatgcagccagacgccaactcctgatttcgaatcaaaagtatccggcccaccagaatccaatacacaaaaa 420  Q
     | ||  ||||      |||||||| | |||||| |||| || ||||||||| ||||||||||| ||  ||||||||| ||| |||| |||||||||    
T  36673 agaaacaccaaatcacgccaaacaaaattgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaaaaa 36577  T

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