View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2966-Insertion-6 (Length: 803)

Name: NF2966-Insertion-6
Description: NF2966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2966-Insertion-6
NF2966-Insertion-6
[»] chr2 (42 HSPs)
chr2 (8-170)||(3054436-3054598)
chr2 (192-369)||(817599-817777)
chr2 (421-531)||(8736336-8736445)
chr2 (421-501)||(7611783-7611863)
chr2 (421-501)||(45094366-45094446)
chr2 (421-494)||(12263531-12263604)
chr2 (424-501)||(44255732-44255809)
chr2 (421-501)||(7167562-7167642)
chr2 (421-501)||(28740694-28740774)
chr2 (427-565)||(767207-767345)
chr2 (424-494)||(7309661-7309731)
chr2 (421-531)||(20935775-20935884)
chr2 (424-494)||(39630329-39630399)
chr2 (421-501)||(6749255-6749335)
chr2 (421-501)||(30698379-30698459)
chr2 (424-531)||(769105-769211)
chr2 (424-531)||(1583707-1583813)
chr2 (424-531)||(33189155-33189261)
chr2 (424-494)||(3092387-3092457)
chr2 (424-494)||(11141410-11141480)
chr2 (424-486)||(35047577-35047639)
chr2 (424-501)||(740802-740879)
chr2 (421-501)||(1730151-1730230)
chr2 (425-501)||(7227911-7227987)
chr2 (421-488)||(11606825-11606892)
chr2 (421-494)||(17905758-17905830)
chr2 (421-558)||(21504492-21504627)
chr2 (424-493)||(28022002-28022071)
chr2 (421-501)||(41585585-41585665)
chr2 (421-488)||(11594920-11594987)
chr2 (421-488)||(14306702-14306769)
chr2 (424-494)||(2274687-2274757)
chr2 (437-499)||(2924824-2924886)
chr2 (424-482)||(11595406-11595464)
chr2 (421-531)||(13017848-13017956)
chr2 (425-482)||(11607308-11607365)
chr2 (437-485)||(42941047-42941095)
chr2 (424-501)||(32840090-32840167)
chr2 (421-488)||(31613925-31613992)
chr2 (441-511)||(11981471-11981541)
chr2 (421-531)||(32839543-32839652)
chr2 (421-501)||(44205552-44205633)
[»] chr4 (34 HSPs)
chr4 (421-531)||(16516240-16516350)
chr4 (421-501)||(29091235-29091315)
chr4 (425-531)||(2125926-2126031)
chr4 (425-531)||(35470191-35470296)
chr4 (423-501)||(56339231-56339309)
chr4 (421-494)||(29685971-29686044)
chr4 (421-501)||(40338147-40338227)
chr4 (426-509)||(24062861-24062944)
chr4 (421-501)||(4490125-4490205)
chr4 (425-501)||(13318558-13318634)
chr4 (429-501)||(46242447-46242519)
chr4 (421-501)||(53760685-53760765)
chr4 (247-369)||(30665969-30666092)
chr4 (222-341)||(34611182-34611301)
chr4 (424-531)||(42776141-42776247)
chr4 (421-487)||(47108392-47108458)
chr4 (424-493)||(13088623-13088692)
chr4 (421-501)||(17727163-17727243)
chr4 (421-501)||(24705449-24705529)
chr4 (425-509)||(52494014-52494097)
chr4 (437-488)||(27284573-27284624)
chr4 (426-501)||(42776735-42776810)
chr4 (421-488)||(54566286-54566353)
chr4 (424-526)||(46242995-46243096)
chr4 (424-501)||(52294943-52295020)
chr4 (425-501)||(10354440-10354516)
chr4 (425-501)||(30303819-30303895)
chr4 (421-501)||(41139571-41139651)
chr4 (437-531)||(40548129-40548222)
chr4 (427-499)||(42775705-42775780)
chr4 (715-803)||(6006089-6006177)
chr4 (436-488)||(16300128-16300180)
chr4 (424-470)||(18922470-18922516)
chr4 (424-501)||(26534591-26534668)
[»] chr5 (31 HSPs)
chr5 (174-369)||(22161014-22161210)
chr5 (421-501)||(40089709-40089789)
chr5 (421-531)||(17542253-17542362)
chr5 (421-531)||(33146242-33146351)
chr5 (421-501)||(22303762-22303842)
chr5 (421-531)||(15270746-15270855)
chr5 (421-494)||(35379447-35379520)
chr5 (424-499)||(6772108-6772183)
chr5 (421-480)||(22768186-22768245)
chr5 (424-531)||(41762110-41762216)
chr5 (424-509)||(11409271-11409356)
chr5 (424-537)||(17493060-17493172)
chr5 (421-493)||(8264614-8264686)
chr5 (421-501)||(10314747-10314827)
chr5 (421-501)||(28489561-28489641)
chr5 (421-501)||(34105169-34105249)
chr5 (424-531)||(9894217-9894323)
chr5 (424-486)||(927414-927476)
chr5 (421-494)||(35111331-35111404)
chr5 (436-501)||(37241505-37241570)
chr5 (429-501)||(30519101-30519173)
chr5 (429-501)||(30559441-30559513)
chr5 (421-531)||(32249990-32250099)
chr5 (424-501)||(12480005-12480082)
chr5 (437-494)||(17444338-17444395)
chr5 (421-454)||(8255117-8255150)
chr5 (436-501)||(9894059-9894124)
chr5 (428-488)||(21541470-21541530)
chr5 (437-488)||(31316272-31316323)
chr5 (425-470)||(8674374-8674419)
chr5 (436-501)||(14834922-14834987)
[»] chr1 (34 HSPs)
chr1 (421-531)||(44571270-44571379)
chr1 (424-531)||(8224837-8224943)
chr1 (421-531)||(39887196-39887305)
chr1 (421-501)||(37036844-37036924)
chr1 (423-531)||(41822594-41822701)
chr1 (421-501)||(49216233-49216313)
chr1 (424-531)||(15467861-15467967)
chr1 (424-494)||(946479-946549)
chr1 (421-531)||(28632481-28632590)
chr1 (421-531)||(37447254-37447363)
chr1 (425-531)||(41822442-41822547)
chr1 (421-494)||(13181693-13181766)
chr1 (421-501)||(35491255-35491335)
chr1 (421-501)||(37447797-37447877)
chr1 (421-501)||(44570776-44570856)
chr1 (421-524)||(23956257-23956359)
chr1 (421-500)||(34003560-34003639)
chr1 (421-531)||(49659285-49659394)
chr1 (424-501)||(31166408-31166485)
chr1 (421-565)||(10166534-10166676)
chr1 (421-501)||(41823055-41823135)
chr1 (423-509)||(37448298-37448385)
chr1 (421-488)||(47820324-47820390)
chr1 (424-501)||(48953666-48953743)
chr1 (421-501)||(21267706-21267785)
chr1 (424-531)||(32201838-32201944)
chr1 (420-509)||(1902151-1902240)
chr1 (437-501)||(32128128-32128192)
chr1 (421-501)||(52135520-52135600)
chr1 (431-526)||(6470591-6470685)
chr1 (436-509)||(42230810-42230884)
chr1 (430-531)||(946982-947082)
chr1 (421-501)||(50471848-50471928)
chr1 (424-488)||(51847962-51848025)
[»] chr3 (38 HSPs)
chr3 (421-501)||(26547113-26547193)
chr3 (421-501)||(2104832-2104912)
chr3 (421-501)||(7976646-7976726)
chr3 (421-501)||(37054492-37054572)
chr3 (424-531)||(48947674-48947780)
chr3 (425-531)||(43863849-43863954)
chr3 (421-531)||(46706721-46706830)
chr3 (421-494)||(31021785-31021858)
chr3 (425-494)||(36397887-36397956)
chr3 (424-501)||(52527134-52527211)
chr3 (425-494)||(53470327-53470396)
chr3 (421-565)||(21307426-21307569)
chr3 (421-501)||(42005847-42005927)
chr3 (421-501)||(47767530-47767610)
chr3 (424-531)||(53129740-53129846)
chr3 (424-494)||(34396407-34396477)
chr3 (425-531)||(38506774-38506879)
chr3 (425-494)||(671517-671586)
chr3 (425-534)||(6836957-6837065)
chr3 (425-494)||(34088676-34088745)
chr3 (424-509)||(46635936-46636021)
chr3 (421-501)||(7302444-7302524)
chr3 (437-501)||(35279832-35279896)
chr3 (421-531)||(47336950-47337059)
chr3 (421-501)||(30766651-30766731)
chr3 (421-488)||(15760376-15760443)
chr3 (425-488)||(21731012-21731075)
chr3 (421-488)||(28182140-28182206)
chr3 (421-488)||(36635993-36636060)
chr3 (436-531)||(47284112-47284206)
chr3 (437-494)||(26323461-26323518)
chr3 (420-524)||(32665960-32666064)
chr3 (424-511)||(1146842-1146928)
chr3 (431-502)||(55460437-55460508)
chr3 (424-482)||(44288356-44288414)
chr3 (428-488)||(20634319-20634379)
chr3 (424-481)||(30767412-30767471)
chr3 (420-482)||(40493186-40493248)
[»] scaffold0400 (1 HSPs)
scaffold0400 (421-531)||(4393-4502)
[»] scaffold0365 (1 HSPs)
scaffold0365 (421-531)||(5037-5146)
[»] chr8 (29 HSPs)
chr8 (421-531)||(34008850-34008959)
chr8 (424-531)||(29257259-29257365)
chr8 (424-494)||(40734009-40734079)
chr8 (421-501)||(15186722-15186802)
chr8 (425-501)||(24045058-24045134)
chr8 (424-531)||(13144652-13144758)
chr8 (424-531)||(44346586-44346692)
chr8 (425-531)||(29482716-29482821)
chr8 (424-494)||(31980391-31980461)
chr8 (425-531)||(33377206-33377311)
chr8 (424-494)||(14343-14413)
chr8 (421-531)||(24510183-24510291)
chr8 (421-501)||(33986102-33986182)
chr8 (429-501)||(36625138-36625210)
chr8 (424-494)||(1088184-1088255)
chr8 (426-501)||(6416282-6416357)
chr8 (421-501)||(7079428-7079508)
chr8 (425-501)||(9982734-9982810)
chr8 (431-531)||(26520354-26520453)
chr8 (421-501)||(28324567-28324647)
chr8 (438-501)||(8049352-8049415)
chr8 (420-494)||(6460790-6460864)
chr8 (437-483)||(10794995-10795041)
chr8 (421-526)||(10593145-10593249)
chr8 (441-501)||(31976507-31976567)
chr8 (424-487)||(7668751-7668814)
chr8 (424-482)||(33422912-33422971)
chr8 (421-488)||(35404647-35404714)
chr8 (715-780)||(17636609-17636674)
[»] scaffold0129 (1 HSPs)
scaffold0129 (421-501)||(19680-19760)
[»] chr7 (34 HSPs)
chr7 (421-501)||(14790211-14790291)
chr7 (421-501)||(40495328-40495408)
chr7 (424-494)||(14603146-14603216)
chr7 (421-531)||(30080682-30080791)
chr7 (421-501)||(13814875-13814955)
chr7 (425-501)||(19865439-19865515)
chr7 (424-488)||(40495828-40495892)
chr7 (437-565)||(43791125-43791252)
chr7 (421-488)||(22391469-22391536)
chr7 (424-531)||(28539052-28539158)
chr7 (424-531)||(39342526-39342632)
chr7 (429-531)||(9784820-9784921)
chr7 (424-494)||(40667446-40667516)
chr7 (425-494)||(33310909-33310978)
chr7 (424-488)||(30524366-30524430)
chr7 (424-531)||(23548495-23548601)
chr7 (437-531)||(23455144-23455237)
chr7 (424-494)||(30587787-30587857)
chr7 (424-494)||(35455909-35455979)
chr7 (421-494)||(18938893-18938966)
chr7 (424-501)||(26416051-26416128)
chr7 (425-494)||(30629162-30629231)
chr7 (425-501)||(25189111-25189187)
chr7 (425-509)||(45967037-45967121)
chr7 (424-501)||(36328679-36328757)
chr7 (437-531)||(42816618-42816711)
chr7 (432-501)||(3905551-3905620)
chr7 (424-509)||(23695996-23696081)
chr7 (436-501)||(32650671-32650736)
chr7 (446-501)||(45984438-45984493)
chr7 (446-501)||(45988798-45988853)
chr7 (446-494)||(18926727-18926775)
chr7 (421-501)||(41442977-41443061)
chr7 (437-509)||(15990981-15991051)
[»] chr6 (13 HSPs)
chr6 (424-531)||(8475230-8475336)
chr6 (421-531)||(31412970-31413079)
chr6 (424-501)||(6358149-6358226)
chr6 (421-501)||(1195431-1195511)
chr6 (174-369)||(20592599-20592795)
chr6 (421-500)||(9697561-9697640)
chr6 (425-509)||(26901663-26901747)
chr6 (421-494)||(1368582-1368654)
chr6 (421-494)||(28918270-28918342)
chr6 (441-501)||(15616276-15616336)
chr6 (425-488)||(10105150-10105212)
chr6 (436-494)||(15832762-15832821)
chr6 (432-509)||(29395425-29395502)
[»] scaffold0047 (1 HSPs)
scaffold0047 (421-531)||(50202-50311)
[»] scaffold0014 (2 HSPs)
scaffold0014 (424-494)||(221094-221164)
scaffold0014 (424-494)||(223647-223717)
[»] scaffold0301 (1 HSPs)
scaffold0301 (424-531)||(7220-7326)
[»] scaffold0318 (1 HSPs)
scaffold0318 (424-565)||(2902-3041)
[»] scaffold0065 (1 HSPs)
scaffold0065 (436-501)||(9496-9561)
[»] scaffold0169 (1 HSPs)
scaffold0169 (425-501)||(4173-4248)
[»] scaffold0039 (1 HSPs)
scaffold0039 (421-501)||(109129-109208)
[»] scaffold0337 (2 HSPs)
scaffold0337 (430-531)||(15770-15870)
scaffold0337 (436-501)||(16284-16349)
[»] scaffold0417 (1 HSPs)
scaffold0417 (424-488)||(11853-11918)


Alignment Details
Target: chr2 (Bit Score: 151; Significance: 2e-79; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 3054436 - 3054598
Alignment:
Q  8 gaaatttgttagaataaagaaaatctttctataatcatttaattgtacaacctcctagattaatattcctagaatatacaacttcccaggttagtgttta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3054436 gaaatttgttagaataaagaaaatctttctataatcatttaattgtacaacctcctagattaatattcctagaatatacaacttcctaggttagtgttta 3054535  T
Q  108 ttaaataggcaccctaaagctaaaacaacatttgtctctacactttcagactaaagatttggg 170  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3054536 ttaaataggcatcctaaagctaaaacaacatttgtctctacactttcagactcaagatttggg 3054598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 192 - 369
Target Start/End: Complemental strand, 817777 - 817599
Alignment:
Q  192 actatcaggtcagaggggaccattgaaaggccctggtagatatcgacgtgtggttggcaaacttaattacctcacactgactagacaagacattacttgt 291  Q
    |||| |||||||| |||  ||| |||||| |||||| |||||||||||| | || ||||||||||||||||||||| | ||||||| ||||||||| | |    
T  817777 actaccaggtcagcgggagccactgaaagaccctggcagatatcgacgtctagtcggcaaacttaattacctcacagtaactagaccagacattacattt 817678  T
Q  292 gttgttactgtggttagccaatttttaaatgttccgagtgatgaccatt-gaacgttgtgattcacattcttaggtata 369  Q
    ||||||| ||| |||||||||||| | |||| |||  ||||||| |||| |||||||||||| | |||||||| |||||    
T  817677 gttgttagtgtagttagccaatttcttaatgctccatgtgatgatcattggaacgttgtgatccgcattcttaagtata 817599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 8736336 - 8736445
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  8736336 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctttaaatt-attatccaaac 8736434  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  8736435 aatggaattca 8736445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 7611783 - 7611863
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||||||||| |||||||||||||| ||||| ||||||    
T  7611783 taacttttaggtgtcatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcattttgaaaattct 7611863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 45094366 - 45094446
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  45094366 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 45094446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 12263604 - 12263531
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  12263604 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 12263531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 44255809 - 44255732
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  44255809 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 44255732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 7167562 - 7167642
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  7167562 taacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 7167642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 28740774 - 28740694
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  28740774 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 28740694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 427 - 565
Target Start/End: Complemental strand, 767345 - 767207
Alignment:
Q  427 ttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatgga 526  Q
    ||||||||| |||||||||||| ||||| ||||||||||||| |||| |||||||||||||| ||| | | || || |||||||| || ||||| |||||    
T  767345 ttaggtgtcatttgaaattctcaaaattgaacttggacaaaaaacttcataaatttccatcattttaaaatttttccaaattaatcatacaaaccatgga 767246  T
Q  527 gttcaactagaaagattcgagttccctcaaaaaattaca 565  Q
     || | || ||| |||| || ||| ||||||||||||||    
T  767245 atttaccttgaaggatttgaattctctcaaaaaattaca 767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 7309661 - 7309731
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  7309661 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 7309731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 20935884 - 20935775
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||||||| |||| ||||| ||||||  ||||| || || |||||    
T  20935884 taacttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttcaatcattttgaaaattcttcaaatt-atcatccaaac 20935786  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  20935785 aatggaattca 20935775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 39630399 - 39630329
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  39630399 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 39630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 6749335 - 6749255
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  6749335 taactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 6749255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 30698459 - 30698379
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| | |||||||||||| ||||| ||||||    
T  30698459 taacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcacaaatttccatcattttgaaaattct 30698379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 769211 - 769105
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  769211 cttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 769113  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  769112 ggaattca 769105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 1583707 - 1583813
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  1583707 cttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatacttcaaatt-attatccaaacaat 1583805  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  1583806 ggaattca 1583813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 33189155 - 33189261
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  33189155 cttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 33189253  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  33189254 ggaattca 33189261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 3092457 - 3092387
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||| |||| |||||    
T  3092457 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatcattttga 3092387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 11141480 - 11141410
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  11141480 cttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 11141410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 35047577 - 35047639
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccat 486  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  35047577 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaatttccat 35047639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 740879 - 740802
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| || |||||||||||||||||| |||||| ||||||||||| |||||||||||| | ||||| ||||||    
T  740879 cttttaggtctcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccattattttgaaaattct 740802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 1730230 - 1730151
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||| ||| ||||| |||||||| ||||| ||||||    
T  1730230 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaa-ttccatcattttgaaaattct 1730151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 7227911 - 7227987
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| ||||||||| |||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  7227911 ttttaggtgtcatttgaaattttctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 7227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 11606892 - 11606825
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| ||||||||||| |||||| ||||||  |||||||||||||||||||| ||||    
T  11606892 taacttttaggtgtcatttgaaattctataaatttaacttgagcaaaatacttaataaatttctatca 11606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 17905830 - 17905758
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| |||||||||||||||||| |||||| || ||||| || |||||||||||||| |||||    
T  17905830 taacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcattttga 17905758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 558
Target Start/End: Complemental strand, 21504627 - 21504492
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||| ||||||||| |||||| ||||||||||| |||||||  | ||| ||||| ||||||  ||||| || || |||||    
T  21504627 taacttttaggtgtcatttgaaat-ctctaaatttaacttgaacaaaatacttcataaattaacttcattttgaaaattcttcaaatt-attattcaaac 21504530  T
Q  521 aatggagttcaactagaaagattcgagttccctcaaaa 558  Q
    |||||| |||| ||  ||| ||| || |||||||||||    
T  21504529 aatggaattcatctcaaaatatttgaattccctcaaaa 21504492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 28022002 - 28022071
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttg 493  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||| | |||||||| ||||| ||||    
T  28022002 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacctcataaattttcatcattttg 28022071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 41585585 - 41585665
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||| ||||||||||| |||||| |||||  ||||||||||| |||||||||||||| ||| | ||||||    
T  41585585 taactttaaggtgtcatttgaaattctttaaatttaacttcaacaaaatacttcataaatttccatcattttaaaaattct 41585665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 11594987 - 11594920
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| ||||||||||| |||||| ||||||  |||||||||||||| ||||| ||||    
T  11594987 taacttttaggtgtcatttgaaattctataaatttaacttgagcaaaatacttaatatatttctatca 11594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 14306702 - 14306769
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| ||||||||||| |||||| |||||| |||||||| || |||||||| |||||    
T  14306702 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaataattcataaattttcatca 14306769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 2274687 - 2274757
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||| ||| |||||| ||||||| |||||    
T  2274687 cttttatgtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaatctccatcattttga 2274757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 2924886 - 2924824
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataatt 499  Q
    ||||||||||||||| || |||||| |||||||||||||||||||| ||||| ||||| ||||    
T  2924886 tttgaaattctctaattttaacttgaacaaaatacttaataaattttcatcattttgaaaatt 2924824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 482
Target Start/End: Complemental strand, 11595464 - 11595406
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaattt 482  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||    
T  11595464 cttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaattt 11595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 13017956 - 13017848
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| || ||||| || |||||||| ||||| ||||| ||| ||  ||||| || || |||||    
T  13017956 taacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaattttcatcattttgaaaatccttcaaatt-attatccaaac 13017859  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  13017858 aatggaattca 13017848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 11607365 - 11607308
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaattt 482  Q
    ||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||    
T  11607365 ttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaattt 11607308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 485
Target Start/End: Complemental strand, 42941095 - 42941047
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttcca 485  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  42941095 tttgaaattctctaaatttaacttgaacaaaatacttcataaatttcca 42941047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 32840090 - 32840167
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||  ||| ||||||||||||||  |||||  |||||||||| || ||||||||||| ||||| ||||||    
T  32840090 cttttaggtgttatttcaaattctctaaatttgacttgaccaaaatacttcatgaatttccatcattttgaaaattct 32840167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 31613992 - 31613925
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| |||  |||||| |||||| |||||| |||||||||||  ||||||| |||||    
T  31613992 taacttttaggtgtcatttttaattctgtaaattaaacttgaacaaaatacttcgtaaattttcatca 31613925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 511
Target Start/End: Original strand, 11981471 - 11981541
Alignment:
Q  441 aaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaat 511  Q
    ||||||| |||||| |||| | |||||| | || |||||||||| ||| ||||||||||||| ||||||||    
T  11981471 aaattctttaaatttaactagtacaaaacatttcataaatttccgtcattttgataattctccaaattaat 11981541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 32839543 - 32839652
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||||||||  || ||||||||||||||  |||||  |||||||||| || || |||||||| || || ||||||  ||||| || || |||||    
T  32839543 taacttttaggtgtcacttcaaattctctaaatttgacttgaccaaaatacttcatgaaattccatcatttggaaaattcttcaaatt-attatccaaac 32839641  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  32839642 aatggaattca 32839652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 44205552 - 44205633
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttgga-caaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||| | |||||| |||||| |  |||| |||| |||||||||||||| ||| | ||||||    
T  44205552 taacttttaggtgtcatttgaaattttttaaatttaacttgaataaaaacacttcataaatttccatcattttcaaaattct 44205633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 6e-27; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 16516350 - 16516240
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||  |||||  |||| |||||    
T  16516350 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaattcttcaaattcttaatccaaac 16516251  T
Q  521 aatggagttca 531  Q
    |||||||||||    
T  16516250 aatggagttca 16516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 29091315 - 29091235
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  29091315 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 29091235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 531
Target Start/End: Complemental strand, 2126031 - 2125926
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||||||    
T  2126031 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatg 2125933  T
Q  525 gagttca 531  Q
    || ||||    
T  2125932 gaattca 2125926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 531
Target Start/End: Complemental strand, 35470296 - 35470191
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||||||    
T  35470296 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatg 35470198  T
Q  525 gagttca 531  Q
    || ||||    
T  35470197 gaattca 35470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 56339309 - 56339231
Alignment:
Q  423 acttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||  ||||||||||| |||||| |||||||||||||||||| |||||||||||||| ||||| ||||||    
T  56339309 acttttaggtgttatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcattttgaaaattct 56339231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 29685971 - 29686044
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| || ||||||||||||||||||| || ||||||||||| |||||||||||||| |||||    
T  29685971 taacttttaggtgtcattagaaattctctaaattcaacatgaacaaaatactttataaatttccatcattttga 29686044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 40338147 - 40338227
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||| |||||||| |||||| | ||||||||| |||||||||||||| ||||| ||||||    
T  40338147 taacttttaggtgtcatttgaaattttctaaatttaacttgaataaaatacttcataaatttccatcattttgaaaattct 40338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 509
Target Start/End: Complemental strand, 24062944 - 24062861
Alignment:
Q  426 tttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    ||||| |||| |||||||||||||||||| || |||||| |||||||| | |||||||||||| ||||| ||||||||||||||    
T  24062944 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatttccatcattttgaaaattctcaaaatta 24062861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 4490205 - 4490125
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| ||||  |||||||||||||||||| |||||| ||||||||| | |||||||||||||| ||||| ||||||    
T  4490205 taacttttatgtgtaatttgaaattctctaaatttaacttgaacaaaatacatcataaatttccatcattttgaaaattct 4490125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 13318558 - 13318634
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| |||| |||| ||||| ||||||    
T  13318558 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataagtttctatcattttgaaaattct 13318634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 46242447 - 46242519
Alignment:
Q  429 aggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  46242447 aggtgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 46242519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 53760685 - 53760765
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||| |||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||| | ||||||    
T  53760685 taactttttggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaattct 53760765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 369
Target Start/End: Original strand, 30665969 - 30666092
Alignment:
Q  247 ggcaaacttaattacctcacactgactagacaagacattacttgtgttgttactgtggttagccaatttttaaatgttccgagtgatgaccatt-gaacg 345  Q
    |||||||| |||||||||||| | |  |||| ||||||||| | || ||||| |||||||||||||| | |||||| |||  |||||||||||| |||||    
T  30665969 ggcaaactaaattacctcacagtaagcagaccagacattacgtttgctgttagtgtggttagccaatctctaaatgctccatgtgatgaccattggaacg 30666068  T
Q  346 ttgtgattcacattcttaggtata 369  Q
     |||||||| |||||||| |||||    
T  30666069 ctgtgattcgcattcttaagtata 30666092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 341
Target Start/End: Original strand, 34611182 - 34611301
Alignment:
Q  222 ccctggtagatatcgacgtgtggttggcaaacttaattacctcacactgactagacaagacattacttgtgttgttactgtggttagccaatttttaaat 321  Q
    |||||||  |||||||||| | ||||| |||||||||||||||||| |||| || |  |||||||||| || ||| | ||||||||| |||||| |||||    
T  34611182 ccctggtcaatatcgacgtctagttggaaaacttaattacctcacagtgaccaggccggacattacttttgctgtcagtgtggttagtcaatttctaaat 34611281  T
Q  322 gttccgagtgatgaccattg 341  Q
    | |||  |||||||||||||    
T  34611282 gctccatgtgatgaccattg 34611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 42776141 - 42776247
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||||||| |||| ||||| ||| ||  ||||| || || ||||||||    
T  42776141 cttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttctatcattttgaaaatgcttcaaatt-attatccaaacaat 42776239  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  42776240 ggaattca 42776247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 47108458 - 47108392
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatc 487  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||| ||||    
T  47108458 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaattttcatc 47108392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 13088623 - 13088692
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttg 493  Q
    |||||||||||| |||||||||||||||||| || ||| ||||||||||| |||||||| ||||| ||||    
T  13088623 cttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaattttcatcattttg 13088692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 17727243 - 17727163
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||| |||| |||||||||||||||||| |||||  |||||||||||  ||||||||||| | ||||| ||||||    
T  17727243 taacttttagttgtcatttgaaattctctaaatttaactttaacaaaatacttcgtaaatttccataattttgaaaattct 17727163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 24705529 - 24705449
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||| |||||||| || ||||||||| |||| ||| | ||||||    
T  24705529 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaatttctatcattttaaaaattct 24705449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 52494097 - 52494014
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    ||||||||||| |||||||||||||||||| |||||| | ||||||||| || ||||||||||  ||| | ||||||||||||||    
T  52494097 ttttaggtgtcatttgaaattctctaaatttaacttgaagaaaatacttcat-aatttccatccttttaaaaattctcaaaatta 52494014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 437 - 488
Target Start/End: Original strand, 27284573 - 27284624
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  27284573 tttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatca 27284624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 501
Target Start/End: Complemental strand, 42776810 - 42776735
Alignment:
Q  426 tttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| ||||| ||||||||| |||||||| || ||| ||||||||||| |||||||||||||| ||||| ||||||    
T  42776810 tttatgtgtcatttgaaattatctaaatttaatttgaacaaaatacttcataaatttccatcattttgaaaattct 42776735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 54566353 - 54566286
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||| ||||||| ||||||||||| |||||| |||||| ||||||||||| ||||||||| ||||    
T  54566353 taactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttcgatca 54566286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 526
Target Start/End: Original strand, 46242995 - 46243096
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    ||||||| |||| ||| |||||||||||||| |||||| | |||||||||  ||||||||||||| ||||| ||||||  ||||| || || ||||||||    
T  46242995 cttttagatgtcattttaaattctctaaatttaacttgaataaaatacttcttaaatttccatcattttgaaaattctttaaatt-attatccaaacaat 46243093  T
Q  524 gga 526  Q
    |||    
T  46243094 gga 46243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 52294943 - 52295020
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| |||||||||||||| ||| |||||| ||| ||||||| |||||||  ||||| ||||| ||||||    
T  52294943 cttttaggtgtcatttgaaattctctacatttaacttgaacacaatacttcataaattctcatcattttgaaaattct 52295020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 10354516 - 10354440
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| |||||||||||||| |||   |||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  10354516 ttttaggtgtcatttgaaattctctatatttgtcttgaacaaaatacttcataaattcccatcattttgaaaattct 10354440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 30303895 - 30303819
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||  |||||||||||||||||| || ||||| ||||||||| |||||||| ||| | ||||| ||||||    
T  30303895 ttttaggtgttatttgaaattctctaaatttaagttggataaaatacttcataaattttcattattttgaaaattct 30303819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 41139651 - 41139571
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||| | |||||||||||||||||| | |||  ||||||||||| |||||||| ||||| ||| | ||||||    
T  41139651 taacttttaggtgccatttgaaattctctaaatttagcttaaacaaaatacttcataaattttcatcattttaaaaattct 41139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 40548129 - 40548222
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttca 531  Q
    |||||||||||||||||| |||||| |||||||| ||  ||||||||||||| ||||| ||| ||  ||||| || || ||||||||||| ||||    
T  40548129 tttgaaattctctaaatttaacttgaacaaaatatttcctaaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatggaattca 40548222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 42775780 - 42775705
Alignment:
Q  427 ttaggtgtcttttgaaattctctaaattcaacttggac---aaaatacttaataaatttccatcagtttgataatt 499  Q
    ||||||||| |||||||||||||||||| |||||| ||   ||||||||| |||||||||||| | ||||| ||||    
T  42775780 ttaggtgtcatttgaaattctctaaatttaacttgaacaaaaaaatacttcataaatttccattattttgaaaatt 42775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 803
Target Start/End: Original strand, 6006089 - 6006177
Alignment:
Q  715 caaacaacgcatccttgacgcaagaagagtttcctctgactttcactaaaacgaaaatgagatggaactgttatctttctcaatgatgg 803  Q
    ||||||| |||||| ||||||||||||||||| | ||  || |||||| ||| ||||  || |||| | ||||||||||||||||||||    
T  6006089 caaacaaggcatccatgacgcaagaagagttttcgcttgctgtcactacaacaaaaaccaggtggagcagttatctttctcaatgatgg 6006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 488
Target Start/End: Original strand, 16300128 - 16300180
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| ||| |||||| ||||||||||| |||||||| |||||    
T  16300128 ttttgaaattctctatatttaacttgtacaaaatacttcataaattttcatca 16300180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 18922470 - 18922516
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaata 470  Q
    ||||||| | || |||||||||||||||||| |||||||||||||||    
T  18922470 cttttagatatcatttgaaattctctaaatttaacttggacaaaata 18922516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 26534668 - 26534591
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||| ||||| ||||||||  ||||  ||||||||||| || |||||| |||| ||||| ||||||    
T  26534668 cttttaggtgtcatttcaaattttctaaatttgacttaaacaaaatacttcatgaatttctatcattttgaaaattct 26534591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 9e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 22161210 - 22161014
Alignment:
Q  174 ggatctcaacttcaagcaactatcaggtcagaggggaccattgaaaggccctggtagatatcgacgtgtggttggcaaacttaattacctcacactgact 273  Q
    ||||| |||| |||||  |||| |||||||| |||  ||| |||||| ||| || |||||||||||| | || ||||||||||||| ||||||| | |||    
T  22161210 ggatcccaacgtcaagttactaccaggtcagggggagccactgaaagacccaggcagatatcgacgtctagtcggcaaacttaatttcctcacagtaact 22161111  T
Q  274 agacaagacattacttgtgttgttactgtggttagccaatttttaaatgttccgagtgatgaccatt-gaacgttgtgattcacattcttaggtata 369  Q
    |||||||||||||| | | |||||||||| |||||||||||| |||||| |||  ||||||| |||| ||||| | |||| | |||||||| |||||    
T  22161110 agacaagacattacatttcttgttactgtagttagccaatttctaaatgctccatgtgatgatcattggaacgctttgatccgcattcttaagtata 22161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 40089709 - 40089789
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  40089709 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 40089789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 17542253 - 17542362
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| | ||||||  ||||| || || |||||    
T  17542253 taacttttagatgtcatttgaaattctctaaattcaacttgaacaaaatacttcataaatttccatcattttaaaaattctttaaatt-attattcaaac 17542351  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  17542352 aatggaattca 17542362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 33146351 - 33146242
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  33146351 taacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctttaaatt-attatccaaac 33146253  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  33146252 aatggaattca 33146242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 22303762 - 22303842
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  22303762 taacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 22303842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 15270746 - 15270855
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| | ||||||||| |||||||||||||| |||||  |||||  ||||| || || |||||    
T  15270746 taacttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaatttccatcattttgaatattctacaaatt-attattcaaac 15270844  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  15270845 aatggaattca 15270855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 35379520 - 35379447
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||| || |||||    
T  35379520 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccaccattttga 35379447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 499
Target Start/End: Original strand, 6772108 - 6772183
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataatt 499  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||  ||||||||||    
T  6772108 cttttacgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcgttttgataatt 6772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 22768245 - 22768186
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaat 480  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  22768245 taacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatacttcataaat 22768186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 41762110 - 41762216
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  41762110 cttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 41762208  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  41762209 ggaattca 41762216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 11409356 - 11409271
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||| ||||| ||||||||||| |||||| |||||||||||||||||| | |||||||||||| ||| | ||||||| ||||||    
T  11409356 cttttaagtgtcatttgaaattctttaaatttaacttggacaaaatacttcacaaatttccatcattttaaaaattctccaaatta 11409271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 424 - 537
Target Start/End: Original strand, 17493060 - 17493172
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    ||||| |||||| ||||||||||| |||||| |||||  | ||||||||| |||||||||||||| ||||| ||||||| ||||| || || ||||||||    
T  17493060 cttttcggtgtcatttgaaattctttaaatttaactttaaaaaaatactttataaatttccatcattttgaaaattctccaaatt-atcatccaaacaat 17493158  T
Q  524 ggagttcaactaga 537  Q
    ||| |||| |||||    
T  17493159 ggaattcatctaga 17493172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 8264686 - 8264614
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttg 493  Q
    ||||||||||||||| ||| |||||||||||||| |||||| | ||||||||| |||||||||||||| ||||    
T  8264686 taacttttaggtgtcatttaaaattctctaaatttaacttgaataaaatacttcataaatttccatcattttg 8264614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 10314827 - 10314747
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||  ||||||||||| |||||||| ||||| ||||| ||||||    
T  10314827 taacttttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatcattttgaaaattct 10314747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 28489641 - 28489561
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||| |||| |||||||||||||||||| |||||| ||||| ||||| |||||||||||||| ||| | ||||||    
T  28489641 taacttttagatgtcatttgaaattctctaaatttaacttgaacaaactacttcataaatttccatcattttaaaaattct 28489561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 34105249 - 34105169
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||  |||||||||||  |||||||| |||| ||||| ||||||    
T  34105249 taacttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcgtaaatttctatcattttgaaaattct 34105169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 9894217 - 9894323
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||| |||||| |||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||  ||||| || || ||||||||    
T  9894217 cttttaggtgtcatttgaatttctctgaatttaacttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaatt-attatccaaacaat 9894315  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  9894316 ggaattca 9894323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 927476 - 927414
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccat 486  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||||||||||    
T  927476 cttttaggtgtcatttgaaatcctctaaatttaacttgaacaaaatacttcataaatttccat 927414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 35111404 - 35111331
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| ||||||||||| |||||| |||||  ||||||||||| |||||||| ||||| |||||    
T  35111404 taacttttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatcattttga 35111331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 37241505 - 37241570
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  37241505 ttttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 37241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 429 - 501
Target Start/End: Complemental strand, 30519173 - 30519101
Alignment:
Q  429 aggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||||||| |||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  30519173 aggtgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaattcccatcattttgaaaattct 30519101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 429 - 501
Target Start/End: Complemental strand, 30559513 - 30559441
Alignment:
Q  429 aggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||||||| |||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  30559513 aggtgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaattcccatcattttgaaaattct 30559441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 32249990 - 32250099
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||| ||||||| |||||| |||||| | ||||||||| ||||||| |||||| ||| | ||||||  ||||| || || |||||    
T  32249990 taacttttaggtgtcatttaaaattctttaaatttaacttgaataaaatacttcataaattaccatcattttaaaaattctttaaatt-attatccaaac 32250088  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  32250089 aatggaattca 32250099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 12480082 - 12480005
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||| ||||||||||||||   |||| ||||||||||| || ||||||||||| ||||| ||||||    
T  12480082 cttttaggtgtcatttcaaattctctaaatttgtcttgaacaaaatacttcatgaatttccatcattttgaaaattct 12480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 17444338 - 17444395
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||||||||| ||||  |||||||||||| |||||||||||||| |||||    
T  17444338 tttgaaattctctaaatttaactcagacaaaatacttcataaatttccatcattttga 17444395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 454
Target Start/End: Complemental strand, 8255150 - 8255117
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaatt 454  Q
    ||||||||||||||||||||||||||||||||||    
T  8255150 taacttttaggtgtcttttgaaattctctaaatt 8255117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 9894059 - 9894124
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| |||| |||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  9894059 ttttgaatttctataaatttaacttgaacaaaatacttcataaattcccatcattttgaaaattct 9894124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 21541470 - 21541530
Alignment:
Q  428 taggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||| |||||||||||||||||| |||||| |||||||| || ||| ||||| ||||    
T  21541470 taggtgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatca 21541530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 488
Target Start/End: Complemental strand, 31316323 - 31316272
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||||||||||| |||||  ||||||| ||| ||||||||||||||    
T  31316323 tttgaaattctctaaatttaacttaaacaaaatgcttcataaatttccatca 31316272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 8674374 - 8674419
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaata 470  Q
    ||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  8674374 ttttatgtgtcatttgaaattctctaaatttaacttgaacaaaata 8674419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 501
Target Start/End: Complemental strand, 14834987 - 14834922
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| |||||||||||||| | |||| | ||||||||| |||||||| ||||| ||||| ||||||    
T  14834987 ttttaaaattctctaaatttagcttgaaaaaaatacttcataaattttcatcattttgaaaattct 14834922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 44571379 - 44571270
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| | ||||||  ||||| || || |||||    
T  44571379 taacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatactttataaatttccatcattttaaaaattctttaaatt-attatccaaac 44571281  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  44571280 aatggaattca 44571270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 8224943 - 8224837
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || ||||||||    
T  8224943 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctttaaatt-atcatccaaacaat 8224845  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  8224844 ggaattca 8224837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 39887305 - 39887196
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  39887305 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaac 39887207  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  39887206 aatggaattca 39887196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 37036844 - 37036924
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||| |||| ||||| ||||||    
T  37036844 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatcattttgaaaattct 37036924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 423 - 531
Target Start/End: Original strand, 41822594 - 41822701
Alignment:
Q  423 acttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaa 522  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||||    
T  41822594 acttttaggtgtcatttgaaattctctaattttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaacaa 41822692  T
Q  523 tggagttca 531  Q
    |||| ||||    
T  41822693 tggaattca 41822701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 49216233 - 49216313
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| |||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  49216233 taacatttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 49216313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 15467861 - 15467967
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  15467861 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 15467959  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  15467960 ggaattca 15467967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 946549 - 946479
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  946549 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 946479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 28632481 - 28632590
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||  ||||| || || |||||    
T  28632481 taacttttagatgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaattctttaaatt-attatccaaac 28632579  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  28632580 aatggaattca 28632590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 37447254 - 37447363
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  37447254 taactttttggtgtcatttgaaattctctaaatttaacttgaaccaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaac 37447352  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  37447353 aatggaattca 37447363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 41822442 - 41822547
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||||||    
T  41822442 ttttaggtgtcatttgaaattctctaattttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaacaatg 41822540  T
Q  525 gagttca 531  Q
    || ||||    
T  41822541 gaattca 41822547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 13181766 - 13181693
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  13181766 taacttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 13181693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 35491335 - 35491255
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| ||||| |||||||||||||||||| ||||||  |||||||||| |||||||||||||| ||||| ||||||    
T  35491335 taacttttaagtgtcatttgaaattctctaaatttaacttgagcaaaatacttcataaatttccatcattttgaaaattct 35491255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 37447797 - 37447877
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||| ||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  37447797 taacttttaggtgtcatttgaatttctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 37447877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 44570856 - 44570776
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||| || || ||||||    
T  44570856 taacttttaggtgtcatttgaaattctctatatttaacttgaacaaaatacttcataaatttccatcatttcgaaaattct 44570776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 524
Target Start/End: Original strand, 23956257 - 23956359
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||| ||||| |||||||||||||||||| |||||| | ||||||||| ||||||||||||||  ||||||||| |  ||||| ||||| |||||    
T  23956257 taacttttatgtgtcatttgaaattctctaaatttaacttgaataaaatactttataaatttccatcatattgataatttttcaaatt-ataatccaaac 23956355  T
Q  521 aatg 524  Q
    ||||    
T  23956356 aatg 23956359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 500
Target Start/End: Complemental strand, 34003639 - 34003560
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattc 500  Q
    ||||||||||||||  ||| |||||||||||||| |||||| |||||||| || |||||||||||||| |||||||||||    
T  34003639 taacttttaggtgttattttaaattctctaaatttaacttgaacaaaatatttcataaatttccatcattttgataattc 34003560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 49659394 - 49659285
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||| |||  |||||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||  ||||| || || |||||    
T  49659394 taacttttagatgttatttgaaattctctaaatttaacttgaacaaaatacttcataaattaccatcattttgaaaattcttcaaatt-attatccaaac 49659296  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  49659295 aatggaattca 49659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 31166485 - 31166408
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| |||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  31166485 cttttagatgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 31166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 10166676 - 10166534
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||||| |||||| |||||| | ||||||||| |||||||| ||||  ||||| ||||||| ||||| || || |||||    
T  10166676 taacttttaggtgtcatttgaaattctttaaatttaacttgaataaaatacttcataaattt-catcgttttgaaaattctccaaatt-atcattcaaac 10166579  T
Q  521 aatggagttcaactagaaagattcgagttccctcaaaaaattaca 565  Q
    |||| | |||| ||| | | ||| ||||||| |||||| ||||||    
T  10166578 aatgaaattcacctaaatatatttgagttccttcaaaacattaca 10166534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 41823055 - 41823135
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||  |||||||||||||| ||| |||||| ||||||||||| |||||||||||| | ||||| ||||||    
T  41823055 taacttttaggtgttatttgaaattctctacatttaacttgaacaaaatacttcataaatttccattattttgaaaattct 41823135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 509
Target Start/End: Original strand, 37448298 - 37448385
Alignment:
Q  423 acttttaggtgtcttttgaaattctctaaattcaacttggacaaa-atacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||||| |||| ||||||||||| |||||| |||||| ||||| |||||| |||||||||||||| ||||| ||||||| ||||||    
T  37448298 acttttagatgtcatttgaaattctttaaatttaacttgaacaaatatacttcataaatttccatcattttgaaaattctccaaatta 37448385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 47820390 - 47820324
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| |||||||||| ||||||| |||||| ||||||||||| ||||||||||||||    
T  47820390 taacttttaggtgtcatttgaaattc-ctaaatttaacttgaacaaaatacttcataaatttccatca 47820324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 48953743 - 48953666
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||| ||||||||||||||  ||||| ||||||||||| |||||| ||||||| ||||| ||||||    
T  48953743 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatatccatcattttgaaaattct 48953666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 21267706 - 21267785
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| || ||| ||||||| ||| ||||| |||||||| ||||| ||||||    
T  21267706 taacttttaggtgtcatttgaaattctctaaatttaaattgaacaaaattcttcataaa-ttccatcattttgaaaattct 21267785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 32201944 - 32201838
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||| ||| |||| | ||||||||||| | ||||| | |||| ||||| ||||||  |||||||| || ||||||||    
T  32201944 cttttaggtgtcatttgaaattctctatatttaactagaacaaaatacttca-aaattccaatcattttgaaaattcttcaaattaattatccaaacaat 32201846  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  32201845 ggaattca 32201838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 1902240 - 1902151
Alignment:
Q  420 ctaacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||||||||||||| |||||||||||| |||||  |||| || ||||||| | || ||||||||||| ||| | ||||||| ||||||    
T  1902240 ctaacttttaggtgtcatttgaaattctcaaaattttacttcgagaaaatacctcatgaatttccatcattttaaaaattctctaaatta 1902151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 501
Target Start/End: Complemental strand, 32128192 - 32128128
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||||||||| |||||| ||||||||| | ||||||| |||||| ||||| ||||||    
T  32128192 tttgaaattctctaaatttaacttgaacaaaatacctcataaattcccatcattttgaaaattct 32128128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 52135520 - 52135600
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||  ||| |||||||||||| || || |||||| ||||||||||| |||||||||||||| ||| | ||||||    
T  52135520 taacttttagacgtcatttgaaattctcaaactttaacttgaacaaaatacttcataaatttccatcattttaaaaattct 52135600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 526
Target Start/End: Original strand, 6470591 - 6470685
Alignment:
Q  431 gtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatgga 526  Q
    ||||| |||||||||||||||||| |||||| ||||| |  || |||||||||||||| ||||| ||||||  ||||| || || |||||||||||    
T  6470591 gtgtcatttgaaattctctaaatttaacttgaacaaattttttcataaatttccatcattttgaaaattcttcaaatt-attattcaaacaatgga 6470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 436 - 509
Target Start/End: Complemental strand, 42230884 - 42230810
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattc-tcaaaatta 509  Q
    ||||||||||||||||||| |||||  |||| |||||| |||||||||||||| ||| | ||||| |||||||||    
T  42230884 ttttgaaattctctaaatttaacttaaacaagatacttcataaatttccatcattttaaaaattcttcaaaatta 42230810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 531
Target Start/End: Complemental strand, 947082 - 946982
Alignment:
Q  430 ggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagtt 529  Q
    |||||| ||||||||||| |||||| |||||| |||||||| || ||||||||| |||| ||||| ||| ||  ||||| || || ||||||||||| ||    
T  947082 ggtgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaatttctatcattttgaaaatgcttcaaatt-attatccaaacaatggaatt 946984  T
Q  530 ca 531  Q
    ||    
T  946983 ca 946982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 50471928 - 50471848
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| |||| ||||| ||||||||| |||||||| || ||  ||||||||||| | |||||||||||| ||||| ||||||    
T  50471928 taacatttatgtgtcatttgaaattttctaaatttaatttcaacaaaatacttcaaaaatttccatcattttgaaaattct 50471848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 51848025 - 51847962
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||||| ||||||||||  |||||| |||||  ||||||||||| ||||||||||||||    
T  51848025 cttttaggtgtcatttgaaattccataaatt-aacttaaacaaaatacttgataaatttccatca 51847962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 26547193 - 26547113
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  26547193 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 26547113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 2104912 - 2104832
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  2104912 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 2104832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 7976726 - 7976646
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||| | ||||||    
T  7976726 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaattct 7976646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 37054572 - 37054492
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  37054572 taacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 37054492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 48947780 - 48947674
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  48947780 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 48947682  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  48947681 ggaattca 48947674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 43863849 - 43863954
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||||||    
T  43863849 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatg 43863947  T
Q  525 gagttca 531  Q
    || ||||    
T  43863948 gaattca 43863954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 46706830 - 46706721
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||||| || |||||||||||||||||| |||||| | ||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  46706830 taacttttaggtatcatttgaaattctctaaatttaacttgaaaaaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaac 46706732  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  46706731 aatggaattca 46706721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 31021858 - 31021785
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| ||||||||| | |||||| |||||||||||||||||| |||||||||||||| |||||    
T  31021858 taacttttaggtgtcatttgaaattttttaaatttaacttggacaaaatacttcataaatttccatcattttga 31021785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 36397887 - 36397956
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  36397887 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 36397956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 52527211 - 52527134
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||| | ||||| ||||||    
T  52527211 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccattattttgaaaattct 52527134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 53470327 - 53470396
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  53470327 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 53470396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 565
Target Start/End: Original strand, 21307426 - 21307569
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| | ||||||||| ||||||||| |||| ||||| |||| |  ||||| || || |||||    
T  21307426 taacttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaatttctatcattttgaaaattttacaaatt-attatccaaac 21307524  T
Q  521 aatggagttcaactagaaagattcgagttccctcaaaaaattaca 565  Q
    |||||| |||| ||  ||  ||| || ||||||||||| ||||||    
T  21307525 aatggaattcacctcaaagtatttgaattccctcaaaacattaca 21307569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 42005847 - 42005927
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||    
T  42005847 taacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaattttcatcattttgaaaattct 42005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 47767610 - 47767530
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||||||| ||| || ||| ||||||||||| |||||||||||||| ||||| ||||||    
T  47767610 taacttttaggtgtcatttgaaattctctacatttaatttgaacaaaatacttcataaatttccatcattttgaaaattct 47767530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 53129740 - 53129846
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||| ||  ||||| || || ||||||||    
T  53129740 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaatacttcaaatt-attatccaaacaat 53129838  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  53129839 ggaattca 53129846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 34396407 - 34396477
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||| |||||| |||||    
T  34396407 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattcccatcattttga 34396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 38506774 - 38506879
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| ||||||||||| ||| || |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||||||    
T  38506774 ttttaggtgtcatttgaaattctttaattttaacttgaacaaaatactttataaatttccatcattttgaaaattcttcaaatt-attattcaaacaatg 38506872  T
Q  525 gagttca 531  Q
    || ||||    
T  38506873 gaattca 38506879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 671517 - 671586
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  671517 ttttagatgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 425 - 534
Target Start/End: Original strand, 6836957 - 6837065
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||| ||| ||||||||| |||| ||||| ||||||  ||||| || || |||||||||    
T  6836957 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatgcttcataaatttctatcattttgaaaattcttcaaatt-attattcaaacaatg 6837055  T
Q  525 gagttcaact 534  Q
     | |||||||    
T  6837056 aatttcaact 6837065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 34088745 - 34088676
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||| |||||||||||||||||| || ||| ||||||||||| |||||||||||||| |||||    
T  34088745 ttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaatttccatcattttga 34088676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 46636021 - 46635936
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||| ||| |||||||| ||||| ||||| ||||||| ||||||    
T  46636021 cttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatgcttcataaattttcatcattttgaaaattctccaaatta 46635936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 7302524 - 7302444
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||| |||||||||  ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  7302524 taacttttaggtgtcattttaaattctctgcatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 7302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 501
Target Start/End: Original strand, 35279832 - 35279896
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  35279832 tttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 35279896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 47337059 - 47336950
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||  ||| |||||||||||||||||| |||||| ||||||||||| ||||||||| |||| ||| | ||||||  ||||| || || |||||    
T  47337059 taacttttagaagtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatcatttttaaaattctataaatt-atcatccaaac 47336961  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  47336960 aatggaattca 47336950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 30766731 - 30766651
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| |||||||||| ||| ||| |||||| ||||||||||| ||||||||| |||  ||||| ||||||    
T  30766731 taacttttaggtgtcatttgaaattcactacatttaacttgaacaaaatacttcataaatttctatctttttgaaaattct 30766651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 15760376 - 15760443
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||| |||| ||||||| ||| |||||| ||| || ||||||||||||||||||||||||||    
T  15760376 taacttttagatgtcatttgaaaatctttaaatttaacctgaacaaaatacttaataaatttccatca 15760443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 488
Target Start/End: Complemental strand, 21731075 - 21731012
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||| |||| |||||||||||||||||| |||||| |||||||| || ||||||||||||||    
T  21731075 ttttagatgtcatttgaaattctctaaatttaacttgaacaaaatagttcataaatttccatca 21731012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 28182140 - 28182206
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||||||||| ||||||||||||||||| |||||| || || ||||| ||||||||||||||    
T  28182140 taacttttaggtgtctattgaaattctctaaatttaacttgaac-aagtacttcataaatttccatca 28182206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 36636060 - 36635993
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| |||  ||||||||||||| |||||| ||||||| ||| ||||||||||||||    
T  36636060 taacttttaggtgtcatttataattctctaaatttaacttgaacaaaatccttcataaatttccatca 36635993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 531
Target Start/End: Original strand, 47284112 - 47284206
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttca 531  Q
    |||||||||||| |||||| |||||| | ||||||||| |||||||||||||| ||||| ||||||  ||||| || || ||||||||||| ||||    
T  47284112 ttttgaaattctttaaatttaacttgaataaaatacttcataaatttccatcattttgaaaattcttcaaatt-attattcaaacaatggaattca 47284206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 494
Target Start/End: Complemental strand, 26323518 - 26323461
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||||||||||| |||||    
T  26323518 tttgaaattctctaaatttgacttgaacaaaatacttcataaatttccatcattttga 26323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 524
Target Start/End: Complemental strand, 32666064 - 32665960
Alignment:
Q  420 ctaacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaa 519  Q
    |||||||||||||| | ||| |||||||| ||||| ||||| |||||||||||| |||||||| || || ||| | ||||||  |||||||| || |||     
T  32666064 ctaacttttaggtgacatttcaaattctcaaaatttaactttgacaaaatacttcataaattttcagcattttaaaaattcttcaaattaatcatccaag 32665965  T
Q  520 caatg 524  Q
    |||||    
T  32665964 caatg 32665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 424 - 511
Target Start/End: Original strand, 1146842 - 1146928
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaat 511  Q
    ||||||| |||| |||||||||||||||||| ||||| ||| |||||||| |||||| || |||| ||||| ||||||  ||||||||    
T  1146842 cttttagatgtcatttgaaattctctaaatttaacttcgac-aaatacttcataaatatctatcattttgaaaattcttcaaattaat 1146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 502
Target Start/End: Complemental strand, 55460508 - 55460437
Alignment:
Q  431 gtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctc 502  Q
    ||||| ||||||||||| |||| | |||||| |||||||||||  ||||||||||||| ||||| |||||||    
T  55460508 gtgtcatttgaaattctttaaaattaacttgaacaaaatacttcgtaaatttccatcattttgaaaattctc 55460437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 44288356 - 44288414
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaattt 482  Q
    ||||| |||||| ||||||||| |||||||| |||||| ||||||||||| ||||||||    
T  44288356 ctttttggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaattt 44288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 20634379 - 20634319
Alignment:
Q  428 taggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||| |||||||||||||||||| |||||| |||||||| || ||| ||||| ||||    
T  20634379 taggtgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatca 20634319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 30767471 - 30767412
Alignment:
Q  424 cttttaggtgtcttttgaaattctc--taaattcaacttggacaaaatacttaataaatt 481  Q
    |||||||||||| ||||||||||||  |||||| |||||| ||||||||||| |||||||    
T  30767471 cttttaggtgtcatttgaaattctctataaatttaacttgaacaaaatacttcataaatt 30767412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 40493248 - 40493186
Alignment:
Q  420 ctaacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaattt 482  Q
    |||| ||||||||||| |||||||| ||||||||| ||| || |||||||| || ||||||||    
T  40493248 ctaatttttaggtgtcatttgaaatactctaaattgaacatgaacaaaatagttcataaattt 40493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 4393 - 4502
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||    
T  4393 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaac 4491  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  4492 aatggaattca 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 5037 - 5146
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||    
T  5037 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaac 5135  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  5136 aatggaattca 5146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 34008959 - 34008850
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  34008959 taacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctttaaatt-attatccaaac 34008861  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  34008860 aatggaattca 34008850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 29257259 - 29257365
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  29257259 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 29257357  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  29257358 ggaattca 29257365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 40734009 - 40734079
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  40734009 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 40734079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 15186722 - 15186802
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||| ||| |||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  15186722 taacttttaggtgtcatttaaaaatctctaaatttaacttgaacaaaatacttcataaatttccatcaatttgaaaattct 15186802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 24045134 - 24045058
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  24045134 ttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 24045058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 13144758 - 13144652
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||  ||||| ||||| ||||||  ||||| || || ||||||||    
T  13144758 cttttaggtgtcatttgaaattctctaaattgaacttgaacaaaatacttcataaattctcatcattttgaaaattcttcaaatt-attatccaaacaat 13144660  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  13144659 ggaattca 13144652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 44346586 - 44346692
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  44346586 cttttaggtgtcatttgaaattctctaaatttaacttcaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 44346684  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  44346685 ggaattca 44346692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 29482716 - 29482821
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || |||||||||    
T  29482716 ttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatg 29482814  T
Q  525 gagttca 531  Q
    || ||||    
T  29482815 gaattca 29482821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 31980391 - 31980461
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  31980391 cttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 31980461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 531
Target Start/End: Original strand, 33377206 - 33377311
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatg 524  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||  ||||||||||||| ||||| ||| ||  ||||| || || |||||||||    
T  33377206 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatg 33377304  T
Q  525 gagttca 531  Q
    || ||||    
T  33377305 gaattca 33377311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 14413 - 14343
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| ||||| |||||||||||||||||| |||||| |||| |||||| |||||||||||||| |||||    
T  14413 cttttaagtgtcatttgaaattctctaaatttaacttgaacaagatacttcataaatttccatcattttga 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 24510183 - 24510291
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    |||||||||| |||||||||||| | |||||||| |||||  ||||||||||| |||||||||||||| ||| | ||||||  ||||| || || |||||    
T  24510183 taacttttag-tgtcttttgaaagtttctaaatttaactttaacaaaatacttcataaatttccatcattttaaaaattcttcaaatt-attattcaaac 24510280  T
Q  521 aatggagttca 531  Q
    |||||||||||    
T  24510281 aatggagttca 24510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 33986182 - 33986102
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||| ||||||||||||||  |||||  |||||||||| || ||||||||||| ||||| ||||||    
T  33986182 taacttttaggtgtcatttcaaattctctaaatttgacttgaccaaaatacttcatgaatttccatcattttgaaaattct 33986102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 36625138 - 36625210
Alignment:
Q  429 aggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||| ||||||||||| |||||| ||||||  |||||||||| |||||||||||||| ||||| ||||||    
T  36625138 aggtgtcatttgaaattctttaaatttaacttgatcaaaatacttcataaatttccatcattttgaaaattct 36625210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 1088184 - 1088255
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaa-ttcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||| || |||||| ||||||||||| ||||||||| |||| |||||    
T  1088184 cttttaggtgtcatttgaaattctctaaatttaaacttgaacaaaatacttcataaatttctatcattttga 1088255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 501
Target Start/End: Complemental strand, 6416357 - 6416282
Alignment:
Q  426 tttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| ||||| ||||||||| |||||||| || ||| ||||||||||| |||||||||||||| ||||| ||||||    
T  6416357 tttaagtgtcatttgaaattttctaaatttaagttgaacaaaatacttcataaatttccatcattttgaaaattct 6416282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 7079508 - 7079428
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| || |||||||||||||||||| |||||| | |||||||||  ||||||| ||||  ||||| ||||||    
T  7079508 taacttttaggtatcatttgaaattctctaaatttaacttgaataaaatacttcttaaattttcatcgttttgaaaattct 7079428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 9982810 - 9982734
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||| |||| ||||||||||| |||||| |||||| ||||||||||| |||||||| ||||| ||| | ||||||    
T  9982810 ttttagatgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaattttcatcattttaaaaattct 9982734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 531
Target Start/End: Original strand, 26520354 - 26520453
Alignment:
Q  431 gtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttc 530  Q
    ||||| ||| ||||||||||||||  ||||| | ||||||||| |||||||||||||| ||||| ||||||  ||||| || || ||||||||||| |||    
T  26520354 gtgtcatttcaaattctctaaatttgacttgaataaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaacaatggaattc 26520452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 28324567 - 28324647
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| || |||||| ||| ||| ||| |||||| ||||||||| | |||||||||||||| ||||| ||||||    
T  28324567 taacttttaggtttcatttgaatttccctacatttaacttgaacaaaatacctcataaatttccatcattttgaaaattct 28324647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 501
Target Start/End: Complemental strand, 8049415 - 8049352
Alignment:
Q  438 ttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||| |||| ||||| ||||||    
T  8049415 ttgaagttctctaaatttaacttgaacaaaatacttcataaatttcaatcattttgaaaattct 8049352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 420 - 494
Target Start/End: Original strand, 6460790 - 6460864
Alignment:
Q  420 ctaacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||| ||||||| |||||| || | |||||| |||||| |||||||| || |||||||||||||| |||||    
T  6460790 ctaactttcaggtgtcatttgaacttatttaaatttaacttgaacaaaataattcataaatttccatcattttga 6460864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 483
Target Start/End: Original strand, 10794995 - 10795041
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttc 483  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  10794995 tttgaaattctctaaatttaacttgtacaaaatactttataaatttc 10795041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 526
Target Start/End: Complemental strand, 10593249 - 10593145
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||| ||||||||  |||||||||||||||||| |||||| |||||||| || ||||| ||  |||| ||||| ||||||  ||||| || || |||||    
T  10593249 taactcttaggtgttatttgaaattctctaaatttaacttgaacaaaatatttcataaagtttaatcattttgaaaattcttcaaatt-attatccaaac 10593151  T
Q  521 aatgga 526  Q
    ||||||    
T  10593150 aatgga 10593145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 31976507 - 31976567
Alignment:
Q  441 aaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||||| || ||| | ||||||||| |||||||||||||| ||||| ||||||    
T  31976507 aaattctctaaatttaatttgaataaaatacttcataaatttccatcattttgaaaattct 31976567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 487
Target Start/End: Complemental strand, 7668814 - 7668751
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatc 487  Q
    |||||| ||||| ||||||||||||| |||| |||||  |||||||| || |||||||||||||    
T  7668814 cttttaagtgtcatttgaaattctcttaattaaacttaaacaaaatatttcataaatttccatc 7668751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 33422912 - 33422971
Alignment:
Q  424 cttttaggtgtcttttgaaa-ttctctaaattcaacttggacaaaatacttaataaattt 482  Q
    |||||||||||| ||||||| ||||||||||| || |||||||||||| || ||||||||    
T  33422912 cttttaggtgtcatttgaaaattctctaaatttaatttggacaaaatagttcataaattt 33422971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 35404647 - 35404714
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||| |||||||||| |||| |||||| | |||| |||||| ||||||||||| ||||||||| ||||    
T  35404647 taacctttaggtgtcatttgtaattctttgaatttaacttgaacaaaatacttcataaatttctatca 35404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 780
Target Start/End: Complemental strand, 17636674 - 17636609
Alignment:
Q  715 caaacaacgcatccttgacgcaagaagagtttcctctgactttcactaaaacgaaaatgagatgga 780  Q
    ||||||| |||||| | ||  ||||||||||||||||  |||||| ||||||||||||||| ||||    
T  17636674 caaacaaggcatccattacctaagaagagtttcctctttctttcaataaaacgaaaatgaggtgga 17636609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 19680 - 19760
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||| |||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  19680 taacttttaggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 19760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 14790291 - 14790211
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||| | ||||||    
T  14790291 taacttttaggtgtcatttgaaattctctaaattcaacttgaacaaaatactttataaattttcatcattttaaaaattct 14790211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 40495408 - 40495328
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  40495408 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 40495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 14603146 - 14603216
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  14603146 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 14603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 30080682 - 30080791
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||| |||||||| |||||  ||||||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  30080682 taacttttaggtgtcatttgaaattttctaaatttaacttaaacaaaatacttcataaatttccatcattttgaaaattcttcaaatt-atcatccaaac 30080780  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  30080781 aatggaattca 30080791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 13814875 - 13814955
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||| |||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  13814875 taacttttagatgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 13814955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 19865439 - 19865515
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||    
T  19865439 ttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattaccatcattttgaaaattct 19865515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 40495892 - 40495828
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  40495892 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatca 40495828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 437 - 565
Target Start/End: Complemental strand, 43791252 - 43791125
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttcaactag 536  Q
    |||||||||||||||||| |||||| || ||||||||| ||||||||||||| ||||| ||||||  ||||| || || |||||||||||||||| ||      
T  43791252 tttgaaattctctaaatttaacttgaaccaaatacttattaaatttccatcattttgaaaattcttcaaatt-attatccaaacaatggagttcacctca 43791154  T
Q  537 aaagattcgagttccctcaaaaaattaca 565  Q
    ||  ||| || ||||||||||| ||||||    
T  43791153 aagtatttgaattccctcaaaacattaca 43791125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 22391469 - 22391536
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||| | ||||||||||||    
T  22391469 taacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcagaaatttccatca 22391536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 28539052 - 28539158
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  28539052 cttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 28539150  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  28539151 ggaattca 28539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 39342526 - 39342632
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  39342526 cttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 39342624  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  39342625 ggaattca 39342632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 429 - 531
Target Start/End: Original strand, 9784820 - 9784921
Alignment:
Q  429 aggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagt 528  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||||| |    
T  9784820 aggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatggatt 9784918  T
Q  529 tca 531  Q
    |||    
T  9784919 tca 9784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 40667516 - 40667446
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||||||||||| |||||    
T  40667516 cttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttga 40667446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 33310978 - 33310909
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  33310978 ttttaggtgtcattttaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 33310909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 30524430 - 30524366
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  30524430 cttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatca 30524366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 23548495 - 23548601
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| ||||||||| |||||||| |||||| ||||||||||| ||||||||| |||| ||||| ||| ||  ||||| || || ||||||||    
T  23548495 cttttaggtgtcatttgaaattttctaaatttaacttgaacaaaatacttcataaatttctatcattttgaaaatgcttcaaatt-attatccaaacaat 23548593  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  23548594 ggaattca 23548601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 23455144 - 23455237
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttca 531  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||||| ||||    
T  23455144 tttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaatggaattca 23455237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 30587787 - 30587857
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| ||| ||||||||||||||  ||||| ||||||||||| |||||||||||||| |||||    
T  30587787 cttttaggtgtcatttaaaattctctaaatttgacttgaacaaaatacttcataaatttccatcattttga 30587857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 35455979 - 35455909
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||||||||| ||| |||||||||||||| |||||  ||||||||||| |||||||||||||| |||||    
T  35455979 cttttaggtgtcatttaaaattctctaaatttaacttcaacaaaatacttcataaatttccatcattttga 35455909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 18938893 - 18938966
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| ||||| |||||||||||| || ||| ||||||||||| ||||||||| |||| |||||    
T  18938893 taacttttaggtgtcatttgagattctctaaatttaatttgaacaaaatacttcataaatttctatcattttga 18938966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 26416128 - 26416051
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||| ||||||||||||||  ||||| |||||||||||  ||||||||||||| ||||| ||||||    
T  26416128 cttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcctaaatttccatcattttgaaaattct 26416051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 30629231 - 30629162
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||| ||||||||| |||||||| |||||| | ||||||||| |||||||||||||| |||||    
T  30629231 ttttaggtgtcatttgaaattttctaaatttaacttgaaaaaaatacttcataaatttccatcattttga 30629162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 25189111 - 25189187
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||| ||||  ||||||||||||||||| |||||| |||||||||||  ||||||||||||| ||||| ||||||    
T  25189111 ttttagatgtcacttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcattttgaaaattct 25189187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 45967121 - 45967037
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||| |||| ||||||||||| |||||| |||||| |||||||| || |||||||| ||||| ||| | ||||||||||||||    
T  45967121 ttttagttgtcgtttgaaattctttaaatttaacttgaacaaaatatttcataaattttcatcattttaaaaattctcaaaatta 45967037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 36328679 - 36328757
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaactt-ggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||||||||||||| |||| ||||| | ||||||||||| ||||||| |||||| ||||| ||||||    
T  36328679 cttttaggtgtcatttgaaattctctgaatttaacttagaacaaaatacttcataaattaccatcattttgaaaattct 36328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 531
Target Start/End: Complemental strand, 42816711 - 42816618
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagttca 531  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||| ||  ||||| || || ||||||||||| ||||    
T  42816711 tttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaatgcttcaaatt-attatccaaacaatggaattca 42816618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 3905551 - 3905620
Alignment:
Q  432 tgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||| |||||||||||||||||| |||||| |||||||| || |||||||| ||||| ||||| ||||||    
T  3905551 tgtcatttgaaattctctaaatttaacttgaacaaaataattcataaattttcatcattttgaaaattct 3905620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 23696081 - 23695996
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    ||||||| |||| ||||||||| |||||||| |||||| ||||||||||| |||||||| ||||  ||| | ||||||| ||||||    
T  23696081 cttttagatgtcatttgaaattttctaaatttaacttgaacaaaatactttataaattttcatcgttttaaaaattctccaaatta 23695996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 501
Target Start/End: Complemental strand, 32650736 - 32650671
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||| |||||||| |||||| | ||||||||| |||||||||||||| ||||| ||||||    
T  32650736 ttttgaaattatctaaatttaacttgaaaaaaatacttcataaatttccatcattttgaaaattct 32650671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 45984493 - 45984438
Alignment:
Q  446 ctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  45984493 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 45984438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 45988853 - 45988798
Alignment:
Q  446 ctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  45988853 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 45988798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 446 - 494
Target Start/End: Original strand, 18926727 - 18926775
Alignment:
Q  446 ctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  18926727 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 18926775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 501
Target Start/End: Original strand, 41442977 - 41443061
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaact----tggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||| ||||| ||| ||||||| |||||| ||||    || ||||||||||| |||||||||||||| ||||| ||||||    
T  41442977 taacttttaagtgtcgtttaaaattctttaaatttaactaacttgaacaaaatactttataaatttccatcattttgaaaattct 41443061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 509
Target Start/End: Complemental strand, 15991051 - 15990981
Alignment:
Q  437 tttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    ||||||||| |||| ||| |||||  ||||||||||| |||||||||||||| ||||| ||| ||| ||||||    
T  15991051 tttgaaattttctacatttaactt--acaaaatacttcataaatttccatcattttgaaaatactctaaatta 15990981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 8475336 - 8475230
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  8475336 cttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 8475238  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  8475237 ggaattca 8475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 531
Target Start/End: Complemental strand, 31413079 - 31412970
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||||| |||||| |||||| || |||||||| |||||||||||||| ||||| ||||||  ||||| || || |||||    
T  31413079 taacttttaggtgtcatttgaaattctttaaatttaacttgaactaaatacttcataaatttccatcattttgaaaattcttcaaatt-attatccaaac 31412981  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  31412980 aatggaattca 31412970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 6358149 - 6358226
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||||| | ||||| ||||||    
T  6358149 cttttaggtgtcatttgaaactctctaaatttaacttggacaaaatgcttaataaatttccattattttgaaaattct 6358226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 1195511 - 1195431
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||||||||||||  ||||| ||||||||||| |||||||||||| | ||||| ||||||    
T  1195511 taacttttaggtgtcatttgaaattctctaaatttgacttgaacaaaatacttcataaatttccataattttgaaaattct 1195431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 20592795 - 20592599
Alignment:
Q  174 ggatctcaacttcaagcaactatcaggtcagaggggaccattgaaaggccctggtagatatcgacgtgtggttggcaaacttaattacctcacactgact 273  Q
    ||||| |||| |||||  |||| |||||||| |||  ||| |||||| |||||| |||||||||||| | ||  ||||||||||||||| |||| | |||    
T  20592795 ggatcccaacgtcaagttactaccaggtcagggggagccactgaaagaccctggcagatatcgacgtctagtcagcaaacttaattaccccacagtaact 20592696  T
Q  274 agacaagacattacttgtgttgttactgtggttagccaatttttaaatgttccgagtgatgaccatt-gaacgttgtgattcacattcttaggtata 369  Q
    |||| ||||||||| | |||||||| |||  || |||||||| |||||| |||  |||| || |||| ||||| |||||| | |||||||| |||||    
T  20592695 agaccagacattacatttgttgttagtgtaattggccaatttctaaatgctccatgtgacgatcattggaacgctgtgatccgcattcttaagtata 20592599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 421 - 500
Target Start/End: Complemental strand, 9697640 - 9697561
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattc 500  Q
    |||||||| |||||| |||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||| |||||    
T  9697640 taacttttcggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaattc 9697561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 26901663 - 26901747
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||||| |||| ||||||||||  |||||| |||||| ||||||||||| ||||||||| |||| ||| | ||||||||||||||    
T  26901663 ttttagatgtcatttgaaattcaataaatttaacttgaacaaaatacttcataaatttctatcattttaaaaattctcaaaatta 26901747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 1368654 - 1368582
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||| ||||| |||||||||||||||||| |||||| || ||||| || |||||||||||||| |||||    
T  1368654 taacttttaagtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcattttga 1368582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 28918342 - 28918270
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    ||||||||||||||| ||||||||||||| |||| |||||| || ||||| || |||||||||||||| |||||    
T  28918342 taacttttaggtgtcatttgaaattctctgaatttaacttgaac-aaatatttcataaatttccatcattttga 28918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 15616276 - 15616336
Alignment:
Q  441 aaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    |||||||||||||| |||||| ||||||||||| |||||||| ||||| ||| | ||||||    
T  15616276 aaattctctaaatttaacttgaacaaaatacttcataaatttgcatcattttaaaaattct 15616336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 488
Target Start/End: Complemental strand, 10105212 - 10105150
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatca 488  Q
    ||||||||||| || ||||||||||||||| |||||| | ||||||||| ||| ||||||||||    
T  10105212 ttttaggtgtcatt-gaaattctctaaatttaacttgaataaaatacttcatacatttccatca 10105150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 15832821 - 15832762
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaat-aaatttccatcagtttga 494  Q
    |||||||||||| |||||| |||||| ||||||||||| || |||||||||||| |||||    
T  15832821 ttttgaaattctttaaattgaacttgaacaaaatacttcataaaatttccatcattttga 15832762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 509
Target Start/End: Original strand, 29395425 - 29395502
Alignment:
Q  432 tgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaatta 509  Q
    |||| ||||||||||| |||||| || ||  |||||||||||  ||||| ||||||| ||||| ||||||| ||||||    
T  29395425 tgtcatttgaaattctttaaatttaatttcaacaaaatacttcgtaaatctccatcattttgaaaattctccaaatta 29395502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 531
Target Start/End: Original strand, 50202 - 50311
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaac 520  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||||| ||||| |||||||||||||| ||||| || |||  ||||| || || |||||    
T  50202 taacttttaggtgtcatttgaaattctttaaatttaacttgaacaaagtacttcataaatttccatcattttgaaaactcttcaaatt-attattcaaac 50300  T
Q  521 aatggagttca 531  Q
    |||||| ||||    
T  50301 aatggaattca 50311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 221094 - 221164
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  221094 cttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 221164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 223647 - 223717
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttga 494  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  223647 cttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttga 223717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 531
Target Start/End: Complemental strand, 7326 - 7220
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||||||  ||||||||||||| ||||| ||| ||  ||||| || || ||||||||    
T  7326 cttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcgtaaatttccatcattttgaaaatgcttcaaatt-attatccaaacaat 7228  T
Q  524 ggagttca 531  Q
    ||| ||||    
T  7227 ggaattca 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 565
Target Start/End: Complemental strand, 3041 - 2902
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaat 523  Q
    |||| ||||||| ||| ||||||||||||||  ||||| |||||||| || |||||||||||||| ||||| ||||||  ||||| || || ||||||||    
T  3041 ctttaaggtgtcatttcaaattctctaaatttgacttgaacaaaatatttcataaatttccatcattttgaaaattcttcaaatt-attatccaaacaat 2943  T
Q  524 ggagttcaactagaaagattcgagttccctcaaaaaattaca 565  Q
    ||| |||| ||  ||| ||| || ||||||||||| ||||||    
T  2942 ggaattcacct-caaatatttgaattccctcaaaacattaca 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 9496 - 9561
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  9496 ttttgaaattctctacatttaacttgaacaaaatactttataaatttccatcattttgaaaattct 9561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 4248 - 4173
Alignment:
Q  425 ttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||| ||||||||||||||| || |||||  ||||||||||| |||||||||||||| ||||| ||||||    
T  4248 ttttaggtgtcatttgaaattctctaattttaactta-acaaaatacttcataaatttccatcattttgaaaattct 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 501
Target Start/End: Complemental strand, 109208 - 109129
Alignment:
Q  421 taacttttaggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||||||||| |||||||| |||||| | ||||||||| |||||||| ||||| ||||| ||||||    
T  109208 taacttttaggtgtcatttgaaattatctaaatttaacttgaataaaatactttataaattt-catcattttgaaaattct 109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 430 - 531
Target Start/End: Original strand, 15770 - 15870
Alignment:
Q  430 ggtgtcttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattctcaaaattaataatgcaaacaatggagtt 529  Q
    |||||| |||||| ||||||||||| |||||| |||| |||||| ||||||| |||||| ||||| ||||||  ||||| || || ||||||||||| ||    
T  15770 ggtgtcatttgaagttctctaaatttaacttgaacaatatacttcataaattcccatcattttgaaaattcttcaaatt-attatccaaacaatggaatt 15868  T
Q  530 ca 531  Q
    ||    
T  15869 ca 15870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 16284 - 16349
Alignment:
Q  436 ttttgaaattctctaaattcaacttggacaaaatacttaataaatttccatcagtttgataattct 501  Q
    ||||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||| | ||||||    
T  16284 ttttgaaattctctacatttaacttgaacaaaatactttataaatttccatcattttaaaaattct 16349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 11853 - 11918
Alignment:
Q  424 cttttaggtgtcttttgaaattctctaaattcaac-ttggacaaaatacttaataaatttccatca 488  Q
    |||||||||| | |||||||||||||||||| | | ||| ||||||||||| |||||||| |||||    
T  11853 cttttaggtgccatttgaaattctctaaatttatctttgaacaaaatacttcataaattttcatca 11918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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