View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2966R-Insertion-2 (Length: 940)

Name: NF2966R-Insertion-2
Description: NF2966R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2966R-Insertion-2
NF2966R-Insertion-2
[»] chr8 (38 HSPs)
chr8 (9-292)||(24063938-24064223)
chr8 (345-530)||(24063698-24063885)
chr8 (770-933)||(24063295-24063458)
chr8 (766-933)||(24073764-24073931)
chr8 (766-933)||(24016137-24016304)
chr8 (639-726)||(24063502-24063589)
chr8 (421-522)||(13144655-13144756)
chr8 (421-522)||(29257261-29257362)
chr8 (423-521)||(10593145-10593243)
chr8 (421-522)||(29482717-29482818)
chr8 (421-522)||(33377207-33377308)
chr8 (421-522)||(34008853-34008954)
chr8 (421-522)||(40734011-40734112)
chr8 (421-522)||(44346588-44346689)
chr8 (421-522)||(9982708-9982809)
chr8 (421-522)||(24045032-24045133)
chr8 (421-524)||(6416256-6416359)
chr8 (421-517)||(26520354-26520450)
chr8 (423-519)||(36625138-36625234)
chr8 (421-522)||(1088186-1088288)
chr8 (425-522)||(14314-14411)
chr8 (425-522)||(7079406-7079503)
chr8 (364-509)||(8049270-8049414)
chr8 (425-522)||(31980393-31980490)
chr8 (425-507)||(31976507-31976589)
chr8 (421-522)||(15186727-15186828)
chr8 (425-522)||(33986080-33986177)
chr8 (421-470)||(8469569-8469618)
chr8 (425-522)||(28324572-28324669)
chr8 (421-484)||(44889426-44889489)
chr8 (423-501)||(24510208-24510286)
chr8 (425-522)||(33422914-33423012)
chr8 (425-514)||(15718273-15718362)
chr8 (452-519)||(6460799-6460866)
chr8 (427-498)||(43167660-43167731)
chr8 (476-522)||(29611487-29611533)
chr8 (452-509)||(28190595-28190652)
chr8 (466-523)||(35404651-35404708)
[»] chr3 (41 HSPs)
chr3 (421-522)||(52527108-52527209)
chr3 (421-522)||(53129742-53129843)
chr3 (421-522)||(43863850-43863951)
chr3 (421-522)||(48947677-48947778)
chr3 (421-522)||(2104806-2104907)
chr3 (421-522)||(21307431-21307532)
chr3 (421-522)||(36397888-36397989)
chr3 (421-522)||(46706724-46706825)
chr3 (425-522)||(53470328-53470425)
chr3 (427-522)||(26547093-26547188)
chr3 (411-522)||(40493131-40493242)
chr3 (421-522)||(671518-671619)
chr3 (421-522)||(7976620-7976721)
chr3 (421-522)||(34088643-34088744)
chr3 (425-522)||(42005852-42005949)
chr3 (425-518)||(44288362-44288455)
chr3 (425-509)||(35279834-35279918)
chr3 (438-522)||(46635935-46636019)
chr3 (421-515)||(47336953-47337047)
chr3 (425-522)||(6836958-6837055)
chr3 (421-522)||(7302418-7302519)
chr3 (425-522)||(37054470-37054567)
chr3 (421-522)||(38506775-38506876)
chr3 (425-522)||(47767508-47767605)
chr3 (421-517)||(55460412-55460508)
chr3 (425-522)||(21730977-21731074)
chr3 (421-522)||(30766625-30766726)
chr3 (421-509)||(47284115-47284203)
chr3 (425-522)||(34396409-34396503)
chr3 (425-486)||(46999814-46999875)
chr3 (421-509)||(26323428-26323516)
chr3 (421-522)||(31021751-31021853)
chr3 (437-522)||(48825026-48825111)
chr3 (447-522)||(36635980-36636055)
chr3 (478-520)||(20634337-20634379)
chr3 (421-483)||(30767177-30767239)
chr3 (467-522)||(30767412-30767469)
chr3 (425-522)||(32665960-32666058)
chr3 (421-495)||(50168536-50168610)
chr3 (449-522)||(1796129-1796202)
chr3 (418-499)||(25547369-25547449)
[»] chr1 (42 HSPs)
chr1 (390-522)||(41822597-41822729)
chr1 (421-522)||(8224840-8224941)
chr1 (390-522)||(946417-946547)
chr1 (421-522)||(15467863-15467964)
chr1 (421-522)||(28632486-28632587)
chr1 (421-522)||(39887199-39887300)
chr1 (421-522)||(41822443-41822544)
chr1 (421-522)||(34003533-34003634)
chr1 (421-522)||(37036849-37036950)
chr1 (421-518)||(37447263-37447360)
chr1 (421-522)||(41823060-41823161)
chr1 (390-517)||(6470591-6470717)
chr1 (421-518)||(946985-947082)
chr1 (425-522)||(35491233-35491330)
chr1 (421-522)||(37447802-37447903)
chr1 (421-522)||(44570750-44570851)
chr1 (425-522)||(49216238-49216335)
chr1 (421-522)||(49659288-49659389)
chr1 (421-522)||(37448301-37448402)
chr1 (425-522)||(10166575-10166671)
chr1 (421-522)||(31166382-31166483)
chr1 (421-522)||(44571273-44571374)
chr1 (421-522)||(48953640-48953741)
chr1 (430-522)||(13181669-13181761)
chr1 (390-522)||(21267711-21267841)
chr1 (425-522)||(47820289-47820385)
chr1 (426-515)||(52135532-52135621)
chr1 (421-515)||(32128102-32128196)
chr1 (425-522)||(23956262-23956359)
chr1 (411-522)||(12086962-12087074)
chr1 (426-522)||(50471827-50471923)
chr1 (388-507)||(28250470-28250588)
chr1 (421-519)||(31195528-31195626)
chr1 (421-522)||(32201841-32201942)
chr1 (421-518)||(39589009-39589106)
chr1 (425-509)||(42230796-42230881)
chr1 (421-522)||(51847923-51848023)
chr1 (426-522)||(1902138-1902234)
chr1 (426-509)||(41481338-41481421)
chr1 (479-522)||(43619777-43619820)
chr1 (429-503)||(32287851-32287925)
chr1 (424-522)||(32647376-32647471)
[»] scaffold0400 (1 HSPs)
scaffold0400 (421-522)||(4398-4499)
[»] scaffold0365 (1 HSPs)
scaffold0365 (421-522)||(5042-5143)
[»] chr7 (33 HSPs)
chr7 (421-522)||(14603148-14603249)
chr7 (421-522)||(30080687-30080788)
chr7 (421-516)||(3905551-3905646)
chr7 (421-522)||(28539054-28539155)
chr7 (421-522)||(39342528-39342629)
chr7 (421-522)||(40495302-40495403)
chr7 (421-522)||(40495789-40495890)
chr7 (423-519)||(9784820-9784916)
chr7 (421-509)||(42816621-42816709)
chr7 (426-522)||(45967024-45967120)
chr7 (421-522)||(13814880-13814981)
chr7 (421-522)||(23548497-23548598)
chr7 (425-522)||(25189112-25189209)
chr7 (421-522)||(35455876-35455977)
chr7 (425-522)||(40667417-40667514)
chr7 (421-509)||(23455146-23455234)
chr7 (411-522)||(33310866-33310977)
chr7 (425-522)||(19865440-19865537)
chr7 (425-522)||(30524331-30524428)
chr7 (421-522)||(30587789-30587890)
chr7 (425-522)||(30629133-30629230)
chr7 (425-502)||(18926727-18926804)
chr7 (425-522)||(22391474-22391570)
chr7 (425-522)||(23695982-23696079)
chr7 (429-522)||(26416033-26416126)
chr7 (421-502)||(45984412-45984493)
chr7 (421-502)||(45988772-45988853)
chr7 (430-522)||(14790194-14790286)
chr7 (426-509)||(32650650-32650733)
chr7 (421-522)||(36328681-36328783)
chr7 (423-509)||(43791164-43791250)
chr7 (415-509)||(15990957-15991049)
chr7 (451-522)||(18938898-18938969)
[»] chr6 (13 HSPs)
chr6 (421-522)||(8475233-8475334)
chr6 (421-522)||(1195405-1195506)
chr6 (421-518)||(9697534-9697631)
chr6 (421-522)||(31412973-31413074)
chr6 (425-522)||(28918241-28918337)
chr6 (421-522)||(1368549-1368649)
chr6 (421-507)||(15616276-15616362)
chr6 (421-522)||(6358151-6358252)
chr6 (390-522)||(26901664-26901795)
chr6 (425-516)||(29395425-29395516)
chr6 (428-522)||(10105118-10105211)
chr6 (366-473)||(10737668-10737774)
chr6 (438-488)||(413608-413658)
[»] chr4 (34 HSPs)
chr4 (421-522)||(2125929-2126030)
chr4 (421-522)||(35470194-35470295)
chr4 (421-522)||(29091209-29091310)
chr4 (421-521)||(42775677-42775780)
chr4 (423-522)||(16516245-16516345)
chr4 (421-519)||(46242447-46242545)
chr4 (426-527)||(13318554-13318655)
chr4 (421-522)||(42776143-42776244)
chr4 (425-522)||(42776713-42776810)
chr4 (425-522)||(52294945-52295042)
chr4 (421-509)||(40548131-40548219)
chr4 (425-522)||(17727141-17727238)
chr4 (425-522)||(40338152-40338249)
chr4 (421-518)||(53760694-53760791)
chr4 (425-522)||(56339209-56339306)
chr4 (411-522)||(30303783-30303894)
chr4 (425-514)||(27284570-27284659)
chr4 (421-522)||(29685976-29686077)
chr4 (421-522)||(41139545-41139646)
chr4 (421-522)||(46242997-46243098)
chr4 (425-522)||(47108356-47108453)
chr4 (426-522)||(4490104-4490200)
chr4 (438-522)||(24705440-24705524)
chr4 (455-522)||(13088625-13088692)
chr4 (427-522)||(52494002-52494096)
chr4 (421-522)||(24062843-24062944)
chr4 (430-522)||(10354423-10354515)
chr4 (426-514)||(30303172-30303260)
chr4 (425-522)||(56118529-56118627)
chr4 (449-507)||(17727028-17727086)
chr4 (421-522)||(26534565-26534666)
chr4 (466-519)||(54566292-54566345)
chr4 (427-522)||(36104891-36104986)
chr4 (449-514)||(18922480-18922545)
[»] chr2 (39 HSPs)
chr2 (421-522)||(8736341-8736442)
chr2 (421-522)||(13017851-13017951)
chr2 (421-522)||(20935778-20935879)
chr2 (421-522)||(28740668-28740769)
chr2 (421-522)||(44255706-44255807)
chr2 (421-522)||(45094371-45094472)
chr2 (426-522)||(740781-740877)
chr2 (421-522)||(769108-769209)
chr2 (421-522)||(1583709-1583810)
chr2 (421-522)||(7309663-7309764)
chr2 (425-522)||(14306707-14306804)
chr2 (421-522)||(33189157-33189258)
chr2 (421-522)||(35047579-35047680)
chr2 (421-522)||(39630296-39630397)
chr2 (424-519)||(6749232-6749327)
chr2 (421-522)||(3092354-3092455)
chr2 (421-522)||(7611788-7611889)
chr2 (425-522)||(11141381-11141478)
chr2 (425-522)||(12263502-12263599)
chr2 (390-522)||(1730095-1730225)
chr2 (425-522)||(7167567-7167664)
chr2 (425-522)||(7227912-7228009)
chr2 (421-522)||(17905726-17905825)
chr2 (425-522)||(30698357-30698454)
chr2 (438-522)||(28022004-28022088)
chr2 (390-522)||(21504492-21504622)
chr2 (426-519)||(41585593-41585686)
chr2 (411-522)||(2274689-2274799)
chr2 (425-522)||(32840092-32840189)
chr2 (427-514)||(42941011-42941098)
chr2 (448-509)||(2924823-2924884)
chr2 (421-502)||(11981626-11981707)
chr2 (421-522)||(32839548-32839649)
chr2 (421-521)||(767244-767345)
chr2 (456-521)||(2701877-2701941)
chr2 (465-522)||(11595405-11595462)
chr2 (465-522)||(11607307-11607364)
chr2 (421-522)||(44205557-44205659)
chr2 (219-256)||(36317421-36317458)
[»] scaffold0318 (1 HSPs)
scaffold0318 (421-519)||(2938-3036)
[»] chr5 (33 HSPs)
chr5 (425-522)||(6772110-6772207)
chr5 (421-522)||(10314721-10314822)
chr5 (421-522)||(33146245-33146346)
chr5 (421-522)||(41762112-41762213)
chr5 (421-522)||(927374-927474)
chr5 (421-522)||(8674375-8674474)
chr5 (421-522)||(9894219-9894320)
chr5 (421-522)||(15270751-15270852)
chr5 (421-518)||(17493066-17493163)
chr5 (426-522)||(35111303-35111399)
chr5 (425-522)||(22303767-22303864)
chr5 (425-522)||(34105147-34105244)
chr5 (361-522)||(35379356-35379515)
chr5 (449-522)||(40089714-40089787)
chr5 (425-507)||(14834900-14834982)
chr5 (421-522)||(17542258-17542359)
chr5 (421-522)||(28489535-28489636)
chr5 (426-522)||(8264585-8264681)
chr5 (428-519)||(30519082-30519173)
chr5 (428-519)||(30559422-30559513)
chr5 (427-509)||(37241508-37241590)
chr5 (425-522)||(12479983-12480080)
chr5 (421-522)||(32249995-32250096)
chr5 (421-485)||(17492582-17492646)
chr5 (421-499)||(22305166-22305244)
chr5 (421-509)||(31316233-31316321)
chr5 (421-509)||(37241021-37241108)
chr5 (468-522)||(22768186-22768240)
chr5 (391-509)||(17444340-17444456)
chr5 (478-520)||(21541470-21541512)
chr5 (421-483)||(22302594-22302656)
chr5 (430-507)||(11601120-11601196)
chr5 (220-253)||(18351806-18351839)
[»] scaffold0301 (1 HSPs)
scaffold0301 (421-522)||(7223-7324)
[»] scaffold0337 (2 HSPs)
scaffold0337 (421-518)||(15770-15867)
scaffold0337 (421-509)||(16287-16375)
[»] scaffold0169 (1 HSPs)
scaffold0169 (421-522)||(4147-4247)
[»] scaffold0129 (1 HSPs)
scaffold0129 (425-522)||(19685-19782)
[»] scaffold0047 (1 HSPs)
scaffold0047 (421-522)||(50207-50308)
[»] scaffold0065 (2 HSPs)
scaffold0065 (421-518)||(2812-2909)
scaffold0065 (421-509)||(9499-9587)
[»] scaffold0039 (1 HSPs)
scaffold0039 (421-522)||(109103-109203)
[»] scaffold0014 (2 HSPs)
scaffold0014 (425-522)||(221096-221193)
scaffold0014 (425-522)||(223649-223746)
[»] scaffold0417 (1 HSPs)
scaffold0417 (456-522)||(11855-11922)


Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 24064223 - 24063938
Alignment:
Q  9 agtatagtccttgaattcttaaaattggagtaaattaccaatttaatcattgaaattataggattgtgtgatttaatccctaaaattgataatcatcat- 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  24064223 agtatagtccttgaattcttaaaattggagtaaattaccaatttaatcattgaaattataggattgagtgatttaatccctaaaattgataatcatcatc 24064124  T
Q  108 --tcacatcaattatttgagttcaaatcttggtgaaacaatctttgaatcaccaaagcttcatttctttaagaacaaaagttttaagacaaaaaacaaaa 205  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  24064123 attcacatcaattctttgagttcaaatcttggtgaaacaatctttgaatcaccaaagcttcattcctttaagaacaaaaggtttaagacaaaaaacaaaa 24064024  T
Q  206 gagaactcattaagggttggtctggtggtgttgacttgagaccttgaaatattctaatcttaaggtctcattgggtagtttggcttc 292  Q
    ||||||||| | ||||||||| || |||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||    
T  24064023 gagaactcact-agggttggtttgatggtgttgacttgagaccttgaaatatgttaatcttaaggtctcagtaggtagtttggcttc 24063938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 345 - 530
Target Start/End: Complemental strand, 24063885 - 24063698
Alignment:
Q  345 gtaaatttagatcttagatgg-ggaatgttttgagatgacatactttttt-gagggaatttaaaattattttagatagattccattgtttggatgataat 442  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24063885 gtaaatttagatcttagatggcggaatgttttgagatgatatactttttttgagggaattttaaattattttagatagattccattgtttggatgataat 24063786  T
Q  443 ttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaagtctagga 530  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24063785 ttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaagtctagga 24063698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 770 - 933
Target Start/End: Complemental strand, 24063458 - 24063295
Alignment:
Q  770 acaattatctatggaaccgtggctatattaggttacatgatgtttggagatcatttaaagtctcaatttacattaaatctaccaacaaataaaatcagta 869  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24063458 acaattatctatggaaccgtggctatattaggttacatgatgtttggagatcatttaaagtctcaaatcacattaaatctaccaacaaataaaatcagta 24063359  T
Q  870 caaaaatagcaatatataccac-atagttaatccctttcacaaagtatgctattgtaatcactcc 933  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  24063358 caaaaatagcaatatataccacaatagttaat-cctttcacaaagtatgctattgtaatcactcc 24063295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 766 - 933
Target Start/End: Complemental strand, 24073931 - 24073764
Alignment:
Q  766 aagcacaattatctatggaaccgtggctatattaggttacatgatgtttggagatcatttaaagtctcaatttacattaaatctaccaacaaataaaatc 865  Q
    ||||||||||||| ||||| | || ||| | ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  24073931 aagcacaattatcaatggagctgtagctgtgttaggctacatgatgtttggagatcatttaaagtctcaaatcacattaaatctaccaacaaataaaatc 24073832  T
Q  866 agtacaaaaatagcaatatataccacatagttaatccctttcacaaagtatgctattgtaatcactcc 933  Q
    ||||||||||||||||||||| |||||    |||  |||||||| ||||||||||| |||||||||||    
T  24073831 agtacaaaaatagcaatatatgccacagtaataactcctttcaccaagtatgctatggtaatcactcc 24073764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 766 - 933
Target Start/End: Complemental strand, 24016304 - 24016137
Alignment:
Q  766 aagcacaattatctatggaaccgtggctatattaggttacatgatgtttggagatcatttaaagtctcaatttacattaaatctaccaacaaataaaatc 865  Q
    |||||||||||||||||||||||| ||| ||||||| ||||  |||||||| |||||||| ||||||||| | |||||||||||||||||||||| |||     
T  24016304 aagcacaattatctatggaaccgtagctgtattaggctacagcatgtttggggatcatttgaagtctcaaatcacattaaatctaccaacaaatacaata 24016205  T
Q  866 agtacaaaaatagcaatatataccaca-tagttaatccctttcacaaagtatgctattgtaatcactcc 933  Q
    ||||||||| ||||||||||||||||| || | ||| |||||||| |||||||||||| ||||||||||    
T  24016204 agtacaaaattagcaatatataccacagtaataaat-cctttcactaagtatgctattataatcactcc 24016137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 639 - 726
Target Start/End: Complemental strand, 24063589 - 24063502
Alignment:
Q  639 ggctcataatttttaaaaatttactaagtgatctatatattgtttaaaaaaccacaagttgcacactcaaaattttatcaaagtgata 726  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24063589 ggctcataatttttaaaaaattacaaagtgatctatatattgtttaaaaaaacacaagttgcaccctcaaaattttatcaaagtgata 24063502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 13144655 - 13144756
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| |||| |||||||| | ||||||||||| ||| |||||||||||||||| ||||||||||    
T  13144655 attccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattttgttcaagttcaatttagagaatttcaaatgacaccta 13144754  T
Q  521 aa 522  Q
    ||    
T  13144755 aa 13144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 29257362 - 29257261
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  29257362 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 29257263  T
Q  521 aa 522  Q
    ||    
T  29257262 aa 29257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 423 - 521
Target Start/End: Original strand, 10593145 - 10593243
Alignment:
Q  423 tccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaa 521  Q
    |||||||||||||| |||||||| | |||||||||||| || ||| |||||| ||||||||||||| |||||||||||||||||||| || ||||||||    
T  10593145 tccattgtttggataataatttgaagaattttcaaaatgattaaactttatgaaatattttgttcaagttaaatttagagaatttcaaataacacctaa 10593243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 29482818 - 29482717
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||    
T  29482818 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacactta 29482719  T
Q  521 aa 522  Q
    ||    
T  29482718 aa 29482717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 33377308 - 33377207
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||| | | ||||||||||| |||||||||||||||||||| ||||||||||    
T  33377308 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 33377209  T
Q  521 aa 522  Q
    ||    
T  33377208 aa 33377207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 34008853 - 34008954
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||    
T  34008853 attccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacata 34008952  T
Q  521 aa 522  Q
    ||    
T  34008953 aa 34008954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 40734112 - 40734011
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| ||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  40734112 attccattgttttgataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 40734013  T
Q  521 aa 522  Q
    ||    
T  40734012 aa 40734011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 44346689 - 44346588
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||| | |||||||||||||||||||| ||||||||||    
T  44346689 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttgaagttaaatttagagaatttcaaatgacaccta 44346590  T
Q  521 aa 522  Q
    ||    
T  44346589 aa 44346588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 9982708 - 9982809
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| ||| |||||||| | |||||| ||||| ||||||||||||| | ||||||||||| |||||||||| ||||||||| |||||| |||    
T  9982708 attccattgtttagataataatttgaagaatttttaaaatgatgaaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacatcta 9982807  T
Q  521 aa 522  Q
    ||    
T  9982808 aa 9982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 24045032 - 24045133
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||| | ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||    
T  24045032 attccattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacaccta 24045131  T
Q  521 aa 522  Q
    ||    
T  24045132 aa 24045133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 524
Target Start/End: Original strand, 6416256 - 6416359
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| ||| |||||||| | |||||||||||| ||| ||||||||| | |||||||||||  ||||||||||| ||||||| ||||||| ||    
T  6416256 attccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaacttaaatttagaaaatttcaaatgacactta 6416355  T
Q  521 aagt 524  Q
    ||||    
T  6416356 aagt 6416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 421 - 517
Target Start/End: Complemental strand, 26520450 - 26520354
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacac 517  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||| |||| || ||||||||||||||| | |||||||    
T  26520450 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaagtcaaatttagagaatttgaaatgacac 26520354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 423 - 519
Target Start/End: Complemental strand, 36625234 - 36625138
Alignment:
Q  423 tccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||| ||| |||||||| | |||||||||||| ||| ||||||||| | ||||||| ||| |||||||||| ||||||||| |||||||||    
T  36625234 tccattgtttagataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgatcaagttaaatttaaagaatttcaaatgacacct 36625138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 1088288 - 1088186
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggtt-aaatttagagaatttcatatgacacct 519  Q
    |||||||||||||||| |||||||  |  ||||||||||| ||  ||||||||| | ||||||||||| ||| ||||||||||||||||| |||||||||    
T  1088288 attccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttcaagtttaaatttagagaatttcaaatgacacct 1088189  T
Q  520 aaa 522  Q
    |||    
T  1088188 aaa 1088186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 14314 - 14411
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||| |||||||| |  ||||||||||| ||| ||||||||| | ||| ||||||| |||||||||||||||||||| ||||||| ||||    
T  14314 cattgtttagataataatttgaagtattttcaaaatgatggaaatttatgaagtatcttgttcaagttaaatttagagaatttcaaatgacacttaaa 14411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 7079406 - 7079503
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||  | |||||||||||  ||||||||||| | | |||||| |||| |||||||||||||||||||| |||| |||||||    
T  7079406 cattgtttggataataatttaaagaattttcaaaacgatgaaaatttaagaagtattttattcaagttaaatttagagaatttcaaatgatacctaaa 7079503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 364 - 509
Target Start/End: Original strand, 8049270 - 8049414
Alignment:
Q  364 ggggaatgttttgagatgacatacttttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataat 463  Q
    |||||||||||||||   | ||| | ||||||||||||| ||| |  ||| || || ||| |||||||||||| |||||||| | |||||||||||| ||    
T  8049270 ggggaatgttttgagggaatataatgttttgagggaattcaaa-tactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgat 8049368  T
Q  464 gaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
      ||||||||| | ||||||||||| ||||||||||||||| ||||    
T  8049369 tgaaatttatgaagtattttgttcaagttaaatttagagaacttca 8049414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 31980490 - 31980393
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||| ||||||| ||||||||    ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  31980490 cattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 31980393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 425 - 507
Target Start/End: Complemental strand, 31976589 - 31976507
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaattt 507  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||| ||||  |||||||||||||||||    
T  31976589 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaaattaaatttagagaattt 31976507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 15186828 - 15186727
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||| ||||||||   | |||||||||| | ||| ||||||||| | ||||||||||| |||||||||||||| ||| | ||||||||||    
T  15186828 attctattgtttgggtgataattaaaagaattttcaaattgatggaaatttatgaagtattttgttcaagttaaatttagagatttttaaatgacaccta 15186729  T
Q  521 aa 522  Q
    ||    
T  15186728 aa 15186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 33986080 - 33986177
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||| |||||||| | |||||||||||| ||| ||||| ||| | ||||||| ||| || ||||||||||||||| | ||||||||||||    
T  33986080 cattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttggtcaagtcaaatttagagaatttgaaatgacacctaaa 33986177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 8469569 - 8469618
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatt 470  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  8469569 attccattgtttggataataatttagataattttcaaaatgatgaaaatt 8469618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 28324669 - 28324572
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| ||| |||| | |||||||||||| ||| |||||||||   ||||||||||| ||||||| ||| ||| |||| |||| |||||||    
T  28324669 cattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaggtattttgttcaagttaaatgtagggaaattcaaatgaaacctaaa 28324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 484
Target Start/End: Original strand, 44889426 - 44889489
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttg 484  Q
    |||||||||||||||| |||||||| | |||||||| ||| ||||||||||||| | |||||||    
T  44889426 attccattgtttggataataatttgtagaattttcataatgatgaaaatttatgaagtattttg 44889489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 24510286 - 24510208
Alignment:
Q  423 tccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttaga 501  Q
    ||||||||||| || |||||||| | |||||| ||||| ||| ||||||||| | ||||||||| | ||||||||||||    
T  24510286 tccattgtttgaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttaaagttaaatttaga 24510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 33423012 - 33422914
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaa-tttcatatgacacctaaa 522  Q
    |||||||| |||||||||||| | | |||| |||||  || ||||||||| | |||||||| ||  |||||||||||||| ||||| ||||||||||||    
T  33423012 cattgtttagatgataatttgaaaattttttaaaatggtgtaaatttatgaactattttgtccaaattaaatttagagaattttcaaatgacacctaaa 33422914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 15718273 - 15718362
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatga 514  Q
    |||| |||||||| ||||||| | | |||||||||| ||||||||||| | |  |||||||| | |||||||||||| ||||||| ||||    
T  15718273 cattttttggatgttaatttgaagagttttcaaaatgatgaaaatttaggaaggattttgtttaagttaaatttagataatttcaaatga 15718362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 519
Target Start/End: Complemental strand, 6460866 - 6460799
Alignment:
Q  452 tttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||| ||| ||||||||| | ||||||||||| |||||||||| | || |||| |||||||||    
T  6460866 tttcaaaatgatggaaatttatgaattattttgttcaagttaaatttaaataagttcaaatgacacct 6460799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 498
Target Start/End: Complemental strand, 43167731 - 43167660
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaattt 498  Q
    |||||| ||| |||||||| | ||||||||||||  |||||||||||| | ||||||||| | |||||||||    
T  43167731 ttgtttagataataatttgaagaattttcaaaatgttgaaaatttatgaagtattttgtttaagttaaattt 43167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 476 - 522
Target Start/End: Original strand, 29611487 - 29611533
Alignment:
Q  476 aatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||| |||||||||||||||||||| || |||| ||||    
T  29611487 aatattttgttcaagttaaatttagagaatttcaaataacacttaaa 29611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 28190652 - 28190595
Alignment:
Q  452 tttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||||||| ||  ||||||||| ||||||||||||| |||||||  |||||||||||    
T  28190652 tttcaaaatgatagaaatttatgaaatattttgttcaagttaaatagagagaatttca 28190595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 466 - 523
Target Start/End: Complemental strand, 35404708 - 35404651
Alignment:
Q  466 aaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaag 523  Q
    ||||||||| | ||||||||||| |||||||| | |||||| || |||||||||||||    
T  35404708 aaatttatgaagtattttgttcaagttaaattcaaagaattacaaatgacacctaaag 35404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 5e-31; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 52527108 - 52527209
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||| |||||||||| | |||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  52527108 attccattgtttggttgataatttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 52527207  T
Q  521 aa 522  Q
    ||    
T  52527208 aa 52527209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 53129843 - 53129742
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  53129843 attccattgtttggataataatttgaagtattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 53129744  T
Q  521 aa 522  Q
    ||    
T  53129743 aa 53129742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 43863951 - 43863850
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  43863951 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 43863852  T
Q  521 aa 522  Q
    ||    
T  43863851 aa 43863850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 48947677 - 48947778
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  48947677 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 48947776  T
Q  521 aa 522  Q
    ||    
T  48947777 aa 48947778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 2104806 - 2104907
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  2104806 attctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccta 2104905  T
Q  521 aa 522  Q
    ||    
T  2104906 aa 2104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 21307532 - 21307431
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| ||  ||||||||| | |||||| |||| |||||||||||||||||||| ||||||||||    
T  21307532 attccattgtttggataataatttgtaaaattttcaaaatgatagaaatttatgaagtattttattcaagttaaatttagagaatttcaaatgacaccta 21307433  T
Q  521 aa 522  Q
    ||    
T  21307432 aa 21307431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 36397989 - 36397888
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||| |||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  36397989 attccattgttcggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 36397890  T
Q  521 aa 522  Q
    ||    
T  36397889 aa 36397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 46706724 - 46706825
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||| |||| |||||||||||||||||||| |||| |||||    
T  46706724 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttttttcaagttaaatttagagaatttcaaatgataccta 46706823  T
Q  521 aa 522  Q
    ||    
T  46706824 aa 46706825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 53470425 - 53470328
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  53470425 cattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 53470328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 427 - 522
Target Start/End: Original strand, 26547093 - 26547188
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||| |||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  26547093 ttgttcggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 26547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 411 - 522
Target Start/End: Original strand, 40493131 - 40493242
Alignment:
Q  411 ttttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcat 510  Q
    |||||| || |||| ||| |||||||||||||||||| ||| || ||| ||||||||||||||| | ||||||||||| ||| ||||||||| ||||||     
T  40493131 ttttaggtaaattctattatttggatgataatttggagaatgtttaaagtaatgaaaatttatgaactattttgttcatgttcaatttagagtatttcaa 40493230  T
Q  511 atgacacctaaa 522  Q
    ||||||||||||    
T  40493231 atgacacctaaa 40493242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 671619 - 671518
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||| | |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| |||||| |||    
T  671619 attccattgtttgggtaataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacatcta 671520  T
Q  521 aa 522  Q
    ||    
T  671519 aa 671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 7976620 - 7976721
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||  | |||||| ||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  7976620 attctattgtttggataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 7976719  T
Q  521 aa 522  Q
    ||    
T  7976720 aa 7976721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 34088643 - 34088744
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||| |||| |||||||| |  ||||||||||| ||| ||||||||| | |||||||||||  ||||||||||||||||||| ||||||||||    
T  34088643 attccattgttaggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaaattaaatttagagaatttcaaatgacaccta 34088742  T
Q  521 aa 522  Q
    ||    
T  34088743 aa 34088744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 42005949 - 42005852
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| | ||| |||| | |||||||||||| ||||||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  42005949 cattgtttgggtaatagtttgaagaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaa 42005852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 44288455 - 44288362
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||| |||||||||||||||||| ||| || |||||| |||||||||||| | ||||||||||| |||||||||||| ||||||| ||||||||    
T  44288455 cattatttggatgataatttggagaatctttaaaatattgaaaatttatgaagtattttgttcaagttaaatttagataatttcaaatgacacc 44288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 35279918 - 35279834
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||||||||||||||||    
T  35279918 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttca 35279834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 438 - 522
Target Start/End: Original strand, 46635935 - 46636019
Alignment:
Q  438 ataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| |||||||||||| ||||||||||||| |  |||||||| | |||||||||||||||||||| ||||||||||||    
T  46635935 ataatttggagaattttcaaaatgatgaaaatttatgaagcattttgtttaagttaaatttagagaatttcaaatgacacctaaa 46636019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 421 - 515
Target Start/End: Original strand, 47336953 - 47337047
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgac 515  Q
    ||||||||||||||||||||||||  | |||||| ||||| ||  ||||||||| | ||||||||||| |||||||||||||||||||| |||||    
T  47336953 attccattgtttggatgataatttatagaattttaaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgac 47337047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 6837055 - 6836958
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| || |||||||| | |||||||||||| ||  ||||||||| |  |||||||||| |||||||||||||||||||| ||||||||||||    
T  6837055 cattgtttgaataataatttgaagaattttcaaaatgatagaaatttatgaagcattttgttcaagttaaatttagagaatttcaaatgacacctaaa 6836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 7302418 - 7302519
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||  ||||||||| | ||||||||||    
T  7302418 attccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgcagagaatttaaaatgacaccta 7302517  T
Q  521 aa 522  Q
    ||    
T  7302518 aa 7302519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 37054470 - 37054567
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| | ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  37054470 cattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaa 37054567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 38506876 - 38506775
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||| || |||||||| | |||||||||||| ||| ||||||||  | ||||||||||| |||||| ||| ||||||||| ||||||||||    
T  38506876 attccattgtttgaataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagttaaaattaaagaatttcaaatgacaccta 38506777  T
Q  521 aa 522  Q
    ||    
T  38506776 aa 38506775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 47767508 - 47767605
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| ||| |||| | |||||||||||| ||| ||||||||| | |||||||||||  |||||| |||||||||||| ||||||||||||    
T  47767508 cattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaaattaaatgtagagaatttcaaatgacacctaaa 47767605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 421 - 517
Target Start/End: Original strand, 55460412 - 55460508
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacac 517  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||| | | ||||||||||| ||||| |||| ||||||||| |||||||    
T  55460412 attccatcgtttggatgataattaggagaattttcaaaatgatggaaatttacgaagtattttgttcaagttaattttaaagaatttcaaatgacac 55460508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 21730977 - 21731074
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| || |||||||  | |||||| ||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| |||||| |||||    
T  21730977 cattgtttgaataataatttaaacaatttttaaaatgatggaaatttatgaactattttgttcaagttaaatttagagaatttcaaatgacatctaaa 21731074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 30766625 - 30766726
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| | |||||||||||  ||  ||||||||| | ||||||||||| ||||||| ||| |||||||| ||||||||||    
T  30766625 attccattgtttggataatagtttgaagaattttcaaaaagatagaaatttatgaagtattttgttcaagttaaatgtagtgaatttcaaatgacaccta 30766724  T
Q  521 aa 522  Q
    ||    
T  30766725 aa 30766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 47284203 - 47284115
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||||||||||| || |||||||| | |||||||||||| ||| ||||||||| | |||||| |||| |||||||||| |||||||||    
T  47284203 attccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaagttaaatttaaagaatttca 47284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 34396503 - 34396409
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||| |||||||||||||||| | |   |||||||| |||  |||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  34396503 cattctttggatgataatttgaaga---ttcaaaatgatgggaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 34396409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 46999814 - 46999875
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgtt 486  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||| | |||||||||    
T  46999814 cattgtttggatgataatttggagaattttaaaaataataaaaatttatgaattattttgtt 46999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 26323428 - 26323516
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||| |||||||||| |||||||  |  ||||||||||| ||| ||||||||| | ||||||||||| || |||||||||||||||||    
T  26323428 attccgttgtttggataataatttataggattttcaaaatgatggaaatttatgaagtattttgttcaagtcaaatttagagaatttca 26323516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 31021751 - 31021853
Alignment:
Q  421 attccattgtttggatgataatttggataatttt-caaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||| |||||||| || |||||||| | |||||| |||||| ||| ||||||||| | |||||||| || |||||||||| | ||||||| |||||||||    
T  31021751 attctattgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattttgtccaagttaaatttaaaaaatttcaaatgacacct 31021850  T
Q  520 aaa 522  Q
    |||    
T  31021851 aaa 31021853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 437 - 522
Target Start/End: Complemental strand, 48825111 - 48825026
Alignment:
Q  437 gataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| | |||||| ||||| || |||||||||  ||||||||||||| |||||||||| |||||||||  ||||| |||||    
T  48825111 gataatttgaagaatttttaaaatgataaaaatttataaaatattttgttcaagttaaatttaaagaatttcaactgacatctaaa 48825026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 447 - 522
Target Start/End: Original strand, 36635980 - 36636055
Alignment:
Q  447 ataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||||| ||| ||||||||| |  |||||||||| |||||||||||||||||  | ||||||||||||    
T  36635980 ataatttttaaaatgatggaaatttatgaaggattttgttcaagttaaatttagagaattataaatgacacctaaa 36636055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 520
Target Start/End: Original strand, 20634337 - 20634379
Alignment:
Q  478 tattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  20634337 tattttgtacaagttaaatttagagaatttcaaatgacaccta 20634379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 30767177 - 30767239
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatatttt 483  Q
    |||||||||||||| | |||||||| | |||||||||||| ||| ||||||||| | ||||||    
T  30767177 attccattgtttgggtaataatttgaagaattttcaaaatgatggaaatttatgaagtatttt 30767239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 30767412 - 30767469
Alignment:
Q  467 aatttatgcaatattttgttcaggttaaatt--tagagaatttcatatgacacctaaa 522  Q
    |||||||| | ||||||||||| ||||||||  |||||||||||| ||||||||||||    
T  30767412 aatttatgaagtattttgttcaagttaaatttatagagaatttcaaatgacacctaaa 30767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 32665960 - 32666058
Alignment:
Q  425 cattgtttggatgat-aatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||| ||||||||| |||||| | |||||| |||||  |||||||||||| | ||||||||  | ||||||||| |||||||| | ||| ||||||||    
T  32665960 cattgcttggatgattaatttgaagaatttttaaaatgctgaaaatttatgaagtattttgtcaaagttaaattttgagaatttgaaatgtcacctaaa 32666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 50168610 - 50168536
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaa 495  Q
    |||||||||||||||| ||||| |||| |||||||||||  ||| ||||| ||| | | ||||||||| ||||||    
T  50168610 attccattgtttggataataatatggagaattttcaaaaggatggaaattaatgaagttttttgttcaagttaaa 50168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 522
Target Start/End: Complemental strand, 1796202 - 1796129
Alignment:
Q  449 aattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||| ||||| ||||||||||||  | |||||| || | |||||||||| ||||||||| ||||||| ||||    
T  1796202 aatttttaaaatgatgaaaatttataaagtattttatttaagttaaatttaaagaatttcaaatgacacttaaa 1796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 418 - 499
Target Start/End: Complemental strand, 25547449 - 25547369
Alignment:
Q  418 tagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaattta 499  Q
    |||||| |||| |||||||||||||||| | |||||| ||||||||  ||| ||||| | ||||||||| | ||||||||||    
T  25547449 tagatttcattatttggatgataatttgtagaatttttaaaataattgaaa-ttatgaagtattttgtttaagttaaattta 25547369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 390 - 522
Target Start/End: Complemental strand, 41822729 - 41822597
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    |||||||||||||| ||||  ||| ||||  |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||||||||     
T  41822729 ttttgagggaatttcaaatactttgagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 41822630  T
Q  490 gttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||| ||||||||||||| ||||||||||||    
T  41822629 gttaaaattagagaatttcaaatgacacctaaa 41822597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 8224840 - 8224941
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||||||||||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  8224840 attccattgtttggatgataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 8224939  T
Q  521 aa 522  Q
    ||    
T  8224940 aa 8224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 390 - 522
Target Start/End: Original strand, 946417 - 946547
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    |||||||||||||||||  || ||| |||  |||| ||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | |||||||||||     
T  946417 ttttgagggaatttaaa--tactttggatgaattctattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaa 946514  T
Q  490 gttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||||||||||| ||||||||||||    
T  946515 gttaaatttagagaatttcaaatgacacctaaa 946547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 15467964 - 15467863
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  15467964 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 15467865  T
Q  521 aa 522  Q
    ||    
T  15467864 aa 15467863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 28632587 - 28632486
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| |||||| |||    
T  28632587 attccattgtttggataataatttaaagaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacatcta 28632488  T
Q  521 aa 522  Q
    ||    
T  28632487 aa 28632486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 39887199 - 39887300
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  39887199 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccta 39887298  T
Q  521 aa 522  Q
    ||    
T  39887299 aa 39887300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 41822544 - 41822443
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||| ||||||||||||| ||||||||||    
T  41822544 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaaattagagaatttcaaatgacaccta 41822445  T
Q  521 aa 522  Q
    ||    
T  41822444 aa 41822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 34003533 - 34003634
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||||||||||||   |||| ||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||| | || |||||||    
T  34003533 attccattgtttggatgataatttgatgaattatcaaaatgatggaaatttatgaaatattttgttcaagttaaatttagagaatttaaaataacaccta 34003632  T
Q  521 aa 522  Q
    ||    
T  34003633 aa 34003634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 37036950 - 37036849
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||| |||| |||||||| | |||||||||||| ||  ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  37036950 attccattgttcggataataatttgaagaattttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 37036851  T
Q  521 aa 522  Q
    ||    
T  37036850 aa 37036849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 37447360 - 37447263
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||| ||||| |||||||||||||||||||| ||||||||    
T  37447360 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttggttcaagttaaatttagagaatttcaaatgacacc 37447263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 41823161 - 41823060
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| | |||||||||||||||| ||||||||| | ||||||||||| ||||||| |||||||||||| || |||||||    
T  41823161 attccattgtttggataatagtttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaataacaccta 41823062  T
Q  521 aa 522  Q
    ||    
T  41823061 aa 41823060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 390 - 517
Target Start/End: Complemental strand, 6470717 - 6470591
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    ||||||||||||| ||| || ||| || | |||||||||||||| || |||||||| | |||||||||||| ||| ||||||||| || | ||||||||     
T  6470717 ttttgagggaattcaaa-ttctttgaggtggattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaaaaaatttgttcaa 6470619  T
Q  490 gttaaatttagagaatttcatatgacac 517  Q
    |||||||||||||||||||| |||||||    
T  6470618 gttaaatttagagaatttcaaatgacac 6470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 946985 - 947082
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||  ||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||    
T  946985 attccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaaatattttgttcaagttaaatttaaagaatttcaaatgacacc 947082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 35491233 - 35491330
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  35491233 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgctcaagttaaatttagagaatttcaaatgacacttaaa 35491330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 37447903 - 37447802
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| ||||||| |||| ||||||||||    
T  37447903 attccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaaattcaaatgacaccta 37447804  T
Q  521 aa 522  Q
    ||    
T  37447803 aa 37447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 44570750 - 44570851
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| | ||||||| |||| ||| ||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||    
T  44570750 attccattgtttggataatagtttgaagaattttcgaaatgatggaaatttatgaagtattttgttcaagttaaatatagagaatttcaaatgacaccta 44570849  T
Q  521 aa 522  Q
    ||    
T  44570850 aa 44570851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 49216335 - 49216238
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| |||| |||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  49216335 cattgttgggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 49216238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 49659288 - 49659389
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| |||  |||||||| | ||||||||||| |||||||||||||||||||| || ||| |||    
T  49659288 attccattgtttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacatcta 49659387  T
Q  521 aa 522  Q
    ||    
T  49659388 aa 49659389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 37448402 - 37448301
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatat-tttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| | ||| |||||||| |||||||||| ||||||||| |||||| ||    
T  37448402 attccattgtttggat-ataatttggagaattttcaaaatgatggaaatttatgaagtatatttgttcaagttaaatttaaagaatttcaaatgacatct 37448304  T
Q  520 aaa 522  Q
    |||    
T  37448303 aaa 37448301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 10166575 - 10166671
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| ||||||||||||| |||||||||||  |||||| |||||| | |||||| |||| |||||||||| ||||||||| ||||||||||||    
T  10166575 cattgtttgaatgataatttggagaattttcaaaacgatgaaa-tttatgaagtattttattcaagttaaatttaaagaatttcaaatgacacctaaa 10166671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 31166382 - 31166483
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| |||||||| || |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| |||||| |||    
T  31166382 attctattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttatagaatttcaaatgacatcta 31166481  T
Q  521 aa 522  Q
    ||    
T  31166482 aa 31166483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 44571273 - 44571374
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||| ||||| ||| ||||||||  | ||||||||||| ||| |||||||||||||||| ||||||||||    
T  44571273 attccattgtttggataataatttaaagaatttttaaaatgatggaaatttataaagtattttgttcaagttgaatttagagaatttcaaatgacaccta 44571372  T
Q  521 aa 522  Q
    ||    
T  44571373 aa 44571374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 48953640 - 48953741
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| | ||||||| | ||||||||||| || ||||||||||||||| | ||||||||||    
T  48953640 attctattgtttggataataatttgaagaattttcaaaatgatggatatttatgaagtattttgttcaagtcaaatttagagaatttgaaatgacaccta 48953739  T
Q  521 aa 522  Q
    ||    
T  48953740 aa 48953741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 430 - 522
Target Start/End: Original strand, 13181669 - 13181761
Alignment:
Q  430 tttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| |||||||| | ||| |||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  13181669 tttggataataatttgaagaatattcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 13181761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 390 - 522
Target Start/End: Complemental strand, 21267841 - 21267711
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    |||||||||||||| || |  ||| ||||| ||| |||||||||||| |||||||| | |||||||||||| ||| || |||||| |  ||||||||||     
T  21267841 ttttgagggaatttgaa-tactttgagataaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tttatgaagaattttgttcaa 21267744  T
Q  490 gttaaatttagagaatttcatatgacacctaaa 522  Q
     ||||||||||||||||||| ||||||||||||    
T  21267743 tttaaatttagagaatttcaaatgacacctaaa 21267711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 47820289 - 47820385
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||| ||||| ||| ||||||||| | ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  47820289 cattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttag-gaatttcaaatgacacctaaa 47820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 426 - 515
Target Start/End: Complemental strand, 52135621 - 52135532
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgac 515  Q
    |||||||||||||||||||| | |||||| ||||| ||| ||||||||| | ||||||||||| |||||| || |||||||||| |||||    
T  52135621 attgtttggatgataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttcaagttaaagtttgagaatttcaaatgac 52135532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 515
Target Start/End: Original strand, 32128102 - 32128196
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgac 515  Q
    ||||||||||||  || |||||||| | |||||||||||| |||  ||||||||   ||||||||||| |||||||||||||||||||| |||||    
T  32128102 attccattgttttaataataatttgaagaattttcaaaatgatgggaatttatgaggtattttgttcaagttaaatttagagaatttcaaatgac 32128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 23956359 - 23956262
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||| |||| || ||| ||||||||  | |||||| |||| |||||||||||||||||||| ||||||| ||||    
T  23956359 cattgtttggattataatttgaaaaattatcaatatgatggaaatttataaagtattttattcaagttaaatttagagaatttcaaatgacacataaa 23956262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 411 - 522
Target Start/End: Complemental strand, 12087074 - 12086962
Alignment:
Q  411 ttttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggtt-aaatttagagaatttca 509  Q
    ||||||||| | | |||||||||||||||||  |||| |||||||||||| | ||||||||||| ||||||||||  | ||| ||| ||||| |||||||    
T  12087074 ttttagataaacttcattgtttggatgataacatggagaattttcaaaatgacgaaaatttatgaaatattttgtcaaagttaaaacttagacaatttca 12086975  T
Q  510 tatgacacctaaa 522  Q
     ||||||| ||||    
T  12086974 aatgacacgtaaa 12086962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 50471827 - 50471923
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||| |||||||  | |||||||||||| ||| |||||| || | ||||||||| |  ||||||||||| ||||||| ||||||| ||||    
T  50471827 attgtttggataataatttaaagaattttcaaaatgatggaaatttttgaagtattttgttgaaattaaatttagaaaatttcaaatgacacataaa 50471923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 388 - 507
Target Start/End: Complemental strand, 28250588 - 28250470
Alignment:
Q  388 ttttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttc 487  Q
    ||||||||||||||| ||| ||||||| | || |||  ||||||||||| ||||||| |   ||||| ||||| || ||||| |||| |||||||||| |    
T  28250588 ttttttgagggaattcaaa-ttattttgggtaaattttattgtttggatcataatttagtacatttttaaaattataaaaatatatgaaatattttgtcc 28250490  T
Q  488 aggttaaatttagagaattt 507  Q
    | |||||||||| |||||||    
T  28250489 aagttaaatttatagaattt 28250470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 519
Target Start/End: Original strand, 31195528 - 31195626
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||||||| || |||||||| | |||||| ||||| || |||||||| | | ||||||||| | || ||||||| ||||||| | |||||||||    
T  31195528 attccattgtttgtataataatttgaagaatttttaaaatgataaaaatttacgaagtattttgttaaagtcaaatttaaagaatttgaaatgacacct 31195626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 32201841 - 32201942
Alignment:
Q  421 attccattgtttggatgat-aatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||||||||| || |||||| | |||||||||||| ||   ||||| || | ||||||||||  ||||||| |||||||||||| |||||||||    
T  32201841 attccattgtttggataattaatttgaagaattttcaaaatgattggaattt-tgaagtattttgttctagttaaatatagagaatttcaaatgacacct 32201939  T
Q  520 aaa 522  Q
    |||    
T  32201940 aaa 32201942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 39589106 - 39589009
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| ||||||| || | || | ||||| || |||||||||| | |||||||| | ||||||||| ||| ||||| | ||||||||    
T  39589106 attccattgtttggataataatttagacatttcttaaaatgataaaaatttatgaagtattttgtcctggttaaattaagaaaattttaaatgacacc 39589009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 42230796 - 42230881
Alignment:
Q  425 cattgtttggatgataatttggat-aattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||| ||||||| ||  |||||| ||||| ||| ||||||||| | ||| ||||| | ||||||||||||||||||||    
T  42230796 cattgtttggataataattttgaagaatttttaaaatgatggaaatttatgaagtatcttgtttaagttaaatttagagaatttca 42230881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 51847923 - 51848023
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||| ||||||||||||||||||| ||| || | ||| ||| ||||||||  | ||||||||| | ||| ||||||  |||||||| ||||||||||    
T  51847923 attccatcgtttggatgataatttggagaatattaagaatgatggaaatttatcaagtattttgtttaagtt-aatttatggaatttcaaatgacaccta 51848021  T
Q  521 aa 522  Q
    ||    
T  51848022 aa 51848023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 1902138 - 1902234
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||||||||| || |||||| ||||| ||| ||||| |||   |||||| |  | || |||||| |||||||||| ||||||||||||    
T  1902138 attgtttggatgataatttagagaatttttaaaatgatggaaattcatgaggtattttctcgaagtaaaattttgagaatttcaaatgacacctaaa 1902234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 509
Target Start/End: Complemental strand, 41481421 - 41481338
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||| | |||||||| ||  | ||| ||||| ||| ||||||||| | |||||||||||||||||||||| | |||||||    
T  41481421 attgtttgaaagataatttagaggaatttgaaaatgatgtaaatttatgaagtattttgttcaggttaaatttaaataatttca 41481338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 522
Target Start/End: Complemental strand, 43619820 - 43619777
Alignment:
Q  479 attttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||    
T  43619820 attttgttcaagttaaaattagagaatttcaaatgacacctaaa 43619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 429 - 503
Target Start/End: Complemental strand, 32287925 - 32287851
Alignment:
Q  429 gtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagaga 503  Q
    |||||||| |||||||| | ||||| |||||| ||| ||||||||  | ||||||||||| ||||||| ||||||    
T  32287925 gtttggataataatttgaagaatttccaaaatgatggaaatttataaagtattttgttcaagttaaatatagaga 32287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 424 - 522
Target Start/End: Original strand, 32647376 - 32647471
Alignment:
Q  424 ccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaata-ttttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||||  ||||||| |  ||||||||||| ||| ||||||||| | || ||||||||| ||||    |||||||||||| ||||||||||||    
T  32647376 ccattgtttggatattaatttgaagcattttcaaaatgatggaaatttatgaagtatttttgttcaagtta----tagagaatttcaaatgacacctaaa 32647471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 4499 - 4398
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  4499 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 4400  T
Q  521 aa 522  Q
    ||    
T  4399 aa 4398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 5143 - 5042
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  5143 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 5044  T
Q  521 aa 522  Q
    ||    
T  5043 aa 5042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 3e-26; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 14603249 - 14603148
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  14603249 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 14603150  T
Q  521 aa 522  Q
    ||    
T  14603149 aa 14603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 30080788 - 30080687
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||||||||||||||| | |||||||||||| ||| ||||||||| | ||||||||| | |||||||||||| ||||||| ||||||||||    
T  30080788 attccattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtttaagttaaatttagaaaatttcaaatgacaccta 30080689  T
Q  521 aa 522  Q
    ||    
T  30080688 aa 30080687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 516
Target Start/End: Complemental strand, 3905646 - 3905551
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgaca 516  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||    
T  3905646 attctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaattattttgttcaagttaaatttagagaatttcaaatgaca 3905551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 28539155 - 28539054
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||| | |||||||||||||||||||| ||||||||||    
T  28539155 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacaccta 28539056  T
Q  521 aa 522  Q
    ||    
T  28539055 aa 28539054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 39342629 - 39342528
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| || |||||||    
T  39342629 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacaccta 39342530  T
Q  521 aa 522  Q
    ||    
T  39342529 aa 39342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 40495302 - 40495403
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  40495302 attctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccta 40495401  T
Q  521 aa 522  Q
    ||    
T  40495402 aa 40495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 40495789 - 40495890
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||| ||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  40495789 attccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 40495888  T
Q  521 aa 522  Q
    ||    
T  40495889 aa 40495890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 423 - 519
Target Start/End: Complemental strand, 9784916 - 9784820
Alignment:
Q  423 tccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| |||||||||    
T  9784916 tccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacct 9784820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 42816621 - 42816709
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  42816621 attccattgtttggataataatttgaagcattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttca 42816709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 45967024 - 45967120
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||||||||| || |||||| ||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| | |||| |||||    
T  45967024 attgtttggatgataattttgagaatttttaaaatgatgaaaatttatgaaatattttgttcaagttaaatttaaagaatttcaaacgacaactaaa 45967120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 13814981 - 13814880
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||| ||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| |||||| |||    
T  13814981 attccattatttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacatcta 13814882  T
Q  521 aa 522  Q
    ||    
T  13814881 aa 13814880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 23548598 - 23548497
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||  ||||||||| | ||||||||||| |||||||||||| ||||||| ||||||||||    
T  23548598 attccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagaaaatttcaaatgacaccta 23548499  T
Q  521 aa 522  Q
    ||    
T  23548498 aa 23548497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 25189209 - 25189112
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||||||||||| | |||||||||||| ||| ||||||| | | ||||||||||| ||||||||||||||||||||  ||||| |||||    
T  25189209 cattgtttggatgataatttgaagaattttcaaaatgatggaaatttacgaagtattttgttcaagttaaatttagagaatttcaagtgacatctaaa 25189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 35455876 - 35455977
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||| | |||||||||||||||||| | ||||||||||    
T  35455876 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttgaagttaaatttagagaattttaaatgacaccta 35455975  T
Q  521 aa 522  Q
    ||    
T  35455976 aa 35455977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 40667417 - 40667514
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||||    
T  40667417 cattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaa 40667514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 23455234 - 23455146
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| ||||||||||||||||||||    
T  23455234 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttca 23455146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 411 - 522
Target Start/End: Original strand, 33310866 - 33310977
Alignment:
Q  411 ttttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcat 510  Q
    ||||||||  ||||| ||||||||||  ||||||| | | |||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||| |     
T  33310866 ttttagattaattcctttgtttggatagtaatttgtagagttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttaaa 33310965  T
Q  511 atgacacctaaa 522  Q
    ||||||||||||    
T  33310966 atgacacctaaa 33310977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 19865537 - 19865440
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||| |||||||  | |||||||||||| |||  |||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  19865537 cattgttttgataataatttaaagaattttcaaaatgatggtaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 19865440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 30524331 - 30524428
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||| ||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  30524331 cattgtttggataataatttgaaatatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 30524428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 30587890 - 30587789
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| ||| |||| |  ||||||||||| ||| ||||||||| | ||||||||||| || ||||||||||||||| | ||||||||||    
T  30587890 attccattgtttggataatagtttgaagtattttcaaaatgatggaaatttatgaagtattttgttcaagtcaaatttagagaattttaaatgacaccta 30587791  T
Q  521 aa 522  Q
    ||    
T  30587790 aa 30587789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 30629133 - 30629230
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | |||||| |||| |||||||||||| ||||||| ||||||||||||    
T  30629133 cattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaagtatttttttcaagttaaatttagaaaatttcaaatgacacctaaa 30629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 502
Target Start/End: Complemental strand, 18926804 - 18926727
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagag 502  Q
    ||||||||||||||||||||| | || ||||||||| ||| ||||||||| | ||||||||||| |||||||||||||    
T  18926804 cattgtttggatgataatttgaaaaaatttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagag 18926727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 22391570 - 22391474
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||  | |||||| ||||| ||| |||||| || | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  22391570 cattgtttggataataatttaaagaatttt-aaaatgatggaaatttctgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 22391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 23695982 - 23696079
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||  |||||||||||||| |||||| ||||  ||||||||||||  | ||||||||||| |||||||||||| ||||||| |||||| |||||    
T  23695982 cattgttaagatgataatttggagaatttttaaaacgatgaaaatttataaagtattttgttcaagttaaatttagaaaatttcaaatgacatctaaa 23696079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 429 - 522
Target Start/End: Original strand, 26416033 - 26416126
Alignment:
Q  429 gtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| |||||||| | |||||||||||| ||| ||||||| | | ||||||||||| || ||||||||||||||| | ||||||||||||    
T  26416033 gtttggataataatttgaagaattttcaaaatgatggaaatttaggaagtattttgttcaagtcaaatttagagaatttgaaatgacacctaaa 26416126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 45984412 - 45984493
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagag 502  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||    
T  45984412 attcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagag 45984493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 45988772 - 45988853
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagag 502  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||    
T  45988772 attcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagag 45988853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 430 - 522
Target Start/End: Original strand, 14790194 - 14790286
Alignment:
Q  430 tttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| |||||||  | |||||| ||||| ||||||||||||  | ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  14790194 tttggataataatttaaagaatttttaaaatgatgaaaatttataaagtattttgttcaagttgaatttagagaatttcaaatgacacctaaa 14790286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 509
Target Start/End: Original strand, 32650650 - 32650733
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||| |||| |||||||||||| |||||||    
T  32650650 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttttttcaagttaaatttagataatttca 32650733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 36328783 - 36328681
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttc-aggttaaatttagagaatttcatatgacacct 519  Q
    |||| ||| ||||||| |||||||| | |||||||||||| |||  |||||||| | |||||||||| | |||||||| ||||||||||| |||||||||    
T  36328783 attctattatttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttctaagttaaattcagagaatttcaaatgacacct 36328684  T
Q  520 aaa 522  Q
    |||    
T  36328683 aaa 36328681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 423 - 509
Target Start/End: Original strand, 43791164 - 43791250
Alignment:
Q  423 tccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||| |||||||| | |||||||||||| ||| |||||||   | ||||| ||||| ||||||||||||||||||||    
T  43791164 tccattgtttggataataatttgaagaattttcaaaatgatggaaatttaataagtatttggttcaagttaaatttagagaatttca 43791250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 415 - 509
Target Start/End: Original strand, 15990957 - 15991049
Alignment:
Q  415 agatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||| ||| |||||||||||||||||||| ||  ||||||||||| ||| ||||||||| | ||||||||  | ||||||| |||| |||||||    
T  15990957 agataaattgcattgtttggatgataatttagagtattttcaaaatgatggaaatttatgaagtattttgt--aagttaaatgtagaaaatttca 15991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 451 - 522
Target Start/End: Complemental strand, 18938969 - 18938898
Alignment:
Q  451 ttttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| ||  ||||||||| | |||||||||||  ||||||||||||||| ||| ||||||||||||    
T  18938969 ttttcaaaatgatagaaatttatgaagtattttgttcaaattaaatttagagaatctcaaatgacacctaaa 18938898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 3e-26; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 8475233 - 8475334
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  8475233 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 8475332  T
Q  521 aa 522  Q
    ||    
T  8475333 aa 8475334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 1195405 - 1195506
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| ||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| || ||||||||||||||||| ||||||||||    
T  1195405 attccattgtttagataataatttgaagaattttcaaaattatggaaatttatgaagtattttgttcaagtcaaatttagagaatttcaaatgacaccta 1195504  T
Q  521 aa 522  Q
    ||    
T  1195505 aa 1195506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 9697534 - 9697631
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| ||| ||||   |||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  9697534 attccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacc 9697631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 31412973 - 31413074
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||| ||||| |||||||||| ||||||||| ||||||||||    
T  31412973 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttagttcaagttaaatttaaagaatttcaaatgacaccta 31413072  T
Q  521 aa 522  Q
    ||    
T  31413073 aa 31413074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 28918241 - 28918337
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||| |||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  28918241 cattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaaata-tttgttcaagttaaattcagagaatttcaaatgacacctaaa 28918337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 1368549 - 1368649
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| ||||| || |  ||||||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||| ||||||| ||    
T  1368549 attctattgtttggataataatatgaaggattttcaaaatgatggaaatttatgaaatattt-gttcaagttaaatttagagaatttcaaatgacactta 1368647  T
Q  521 aa 522  Q
    ||    
T  1368648 aa 1368649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 507
Target Start/End: Complemental strand, 15616362 - 15616276
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaattt 507  Q
    |||| ||||||||||| |||||||  | |||||| ||||| ||| ||||||||| | ||||||||||| ||||||||||||||||||    
T  15616362 attctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattttgttcaagttaaatttagagaattt 15616276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 6358252 - 6358151
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| |||||| | || |||||||| | |||||||||||||||| ||||||||  |  ||||||| || |||||||||||||| ||||| ||||||||||    
T  6358252 attctattgttagaataataatttgaagaattttcaaaataatggaaatttattaagcattttgtccaagttaaatttagagagtttcaaatgacaccta 6358153  T
Q  521 aa 522  Q
    ||    
T  6358152 aa 6358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 390 - 522
Target Start/End: Complemental strand, 26901795 - 26901664
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    ||||||||||||| ||| | ||||||| |  ||| ||||||| ||| |||||||| || |||||| ||||| ||  ||||||||| | |||||||||||     
T  26901795 ttttgagggaattcaaa-taattttaggtgaatttcattgttcggaggataattttgagaatttttaaaatgatagaaatttatgaagtattttgttcaa 26901697  T
Q  490 gttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||  |||||||| |||||| |||||    
T  26901696 gttaaatttattgaatttcaaatgacatctaaa 26901664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 29395516 - 29395425
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgaca 516  Q
    ||||| ||||||||||||||||| |||||||||||| ||| | ||||| | | ||||||||| |  ||||||||| ||||||||| ||||||    
T  29395516 cattggttggatgataatttggagaattttcaaaatgatggagatttacgaagtattttgttgaaattaaatttaaagaatttcaaatgaca 29395425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 522
Target Start/End: Original strand, 10105118 - 10105211
Alignment:
Q  428 tgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| |||||||| |  ||||| ||||| ||| |||| |||| | |||||| |||| |||||||||||||||||||| ||||||||||||    
T  10105118 tgtttggataataatttgaagcatttttaaaatgatggaaatgtatgaagtattttattcaagttaaatttagagaatttca-atgacacctaaa 10105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 366 - 473
Target Start/End: Complemental strand, 10737774 - 10737668
Alignment:
Q  366 ggaatgttttgagatgacatacttttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatga 465  Q
    ||||||||| ||| | | ||| ||||| ||||||||||||| || |||||| || ||| |||||||| ||||||| |||||| |||||||||||| ||      
T  10737774 ggaatgtttcgaggtaatatattttttcgagggaatttaaa-ttcttttaggtaaatttcattgttttgatgatagtttggagaattttcaaaatgatag 10737676  T
Q  466 aaatttat 473  Q
    ||||||||    
T  10737675 aaatttat 10737668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 488
Target Start/End: Complemental strand, 413658 - 413608
Alignment:
Q  438 ataatttggataattttcaaaataatgaaaatttatgcaatattttgttca 488  Q
    |||||||| |||||||| ||||||||||||||||||  |||||||||||||    
T  413658 ataatttgaataatttttaaaataatgaaaatttataaaatattttgttca 413608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 3e-26; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 2125929 - 2126030
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  2125929 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 2126028  T
Q  521 aa 522  Q
    ||    
T  2126029 aa 2126030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 35470194 - 35470295
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  35470194 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 35470293  T
Q  521 aa 522  Q
    ||    
T  35470294 aa 35470295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 29091209 - 29091310
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  29091209 attctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccta 29091308  T
Q  521 aa 522  Q
    ||    
T  29091309 aa 29091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 521
Target Start/End: Original strand, 42775677 - 42775780
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaata---ttttgttcaggttaaatttagagaatttcatatgacac 517  Q
    |||||||||||||||| |||||||  |||||||||||||||||| ||||||||| | ||   ||||||||| |||||||||||||||||||| |||||||    
T  42775677 attccattgtttggataataatttaaataattttcaaaataatggaaatttatgaagtatttttttgttcaagttaaatttagagaatttcaaatgacac 42775776  T
Q  518 ctaa 521  Q
    ||||    
T  42775777 ctaa 42775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 423 - 522
Target Start/End: Original strand, 16516245 - 16516345
Alignment:
Q  423 tccattgtttggatgat-aatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaa 521  Q
    |||||||||||||| |  |||||| | |||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||    
T  16516245 tccattgtttggattaagaatttgaagaattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaa 16516344  T
Q  522 a 522  Q
    |    
T  16516345 a 16516345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 421 - 519
Target Start/End: Complemental strand, 46242545 - 46242447
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||||||||  |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| |||||||||    
T  46242545 attccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttatagaatttcaaatgacacct 46242447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 426 - 527
Target Start/End: Complemental strand, 13318655 - 13318554
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaagtc 525  Q
    ||||||||||| |||||||| | |||||||||||| ||  ||| ||||| | ||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  13318655 attgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaatc 13318556  T
Q  526 ta 527  Q
    ||    
T  13318555 ta 13318554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 42776244 - 42776143
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||  ||||||||| | ||||||||| | |||||||||||||||||||| ||||||||||    
T  42776244 attccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacaccta 42776145  T
Q  521 aa 522  Q
    ||    
T  42776144 aa 42776143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 42776713 - 42776810
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||||||||||| | |||||||||||| ||| ||||||||| | |||||||||||  ||||||||||| ||||||| ||||||| ||||    
T  42776713 cattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaaattaaatttagataatttcaaatgacacataaa 42776810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 52295042 - 52294945
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| |||| |||||||| | |||| |||||| ||||||| |||||||||||| ||||||||||||    
T  52295042 cattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattgtgttcaagttaaatgtagagaatttcaaatgacacctaaa 52294945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 40548219 - 40548131
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||| | ||||||||||||| ||||||||||||||||||||    
T  40548219 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttaggaaatattttgttcaagttaaatttagagaatttca 40548131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 17727141 - 17727238
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||||| | | ||||||||| | |||||||||||||||||||| |||||| |||||    
T  17727141 cattgtttggataataatttgaagaattttcaaaattatggaaatttacgaagtattttgttaaagttaaatttagagaatttcaaatgacaactaaa 17727238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 40338249 - 40338152
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||  | |||||||||||| ||| ||||||||| | |||||| |||| |||||||||||| ||||||| ||||||||||||    
T  40338249 cattgtttggataataatttacagaattttcaaaatgatggaaatttatgaagtattttattcaagttaaatttagaaaatttcaaatgacacctaaa 40338152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 53760791 - 53760694
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||| ||||||||||| |||||||| | |||||| ||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||    
T  53760791 attctattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacc 53760694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 56339209 - 56339306
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||||||| | |||||||| || |||||||||| ||||||||| || |||||||||    
T  56339209 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaagttaaatttaaagaatttcaaataacacctaaa 56339306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 411 - 522
Target Start/End: Original strand, 30303783 - 30303894
Alignment:
Q  411 ttttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcat 510  Q
    ||||||||| |||  | ||||||||||||  |||| | |||||||||||||||||||||||||| | |||||| | ||  |||||||||||||||||||     
T  30303783 ttttagataaattttagtgtttggatgattttttgaagaattttcaaaataatgaaaatttatgaagtattttatccaacttaaatttagagaatttcaa 30303882  T
Q  511 atgacacctaaa 522  Q
    || |||||||||    
T  30303883 ataacacctaaa 30303894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 514
Target Start/End: Complemental strand, 27284659 - 27284570
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatga 514  Q
    ||||||||| || || ||||| |||||||| ||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||    
T  27284659 cattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatga 27284570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 29686077 - 29685976
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||| |||||||||||| ||  |||||||||| ||| ||||||||  | ||||||||||| ||| |||||||||||||||  ||||||||||    
T  29686077 attctattgtttagatgataatttgaatttttttcaaaatgatggaaatttataaagtattttgttcatgttgaatttagagaatttctaatgacaccta 29685978  T
Q  521 aa 522  Q
    ||    
T  29685977 aa 29685976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 41139545 - 41139646
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||  | |||||| ||||| ||||||||||||| | ||||||||| | | |||||||||||||||||| ||| ||||||    
T  41139545 attctattgtttggataataatttaaagaatttttaaaatgatgaaaatttatgaagtattttgtttaagctaaatttagagaatttcaaatggcaccta 41139644  T
Q  521 aa 522  Q
    ||    
T  41139645 aa 41139646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 46243098 - 46242997
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||||||||| ||| ||||||| | | |||||| |||| |||||||||||||||||| | |||||| |||    
T  46243098 attccattgtttggataataatttaaagaattttcaaaatgatggaaatttaagaagtattttattcaagttaaatttagagaatttaaaatgacatcta 46242999  T
Q  521 aa 522  Q
    ||    
T  46242998 aa 46242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 47108356 - 47108453
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||| | |||||| | |||||| ||||  ||||||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||||    
T  47108356 cattgtttagataacaatttgaagaatttttaaaacgatgaaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaa 47108453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 4490104 - 4490200
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||| |||||||  | |||||||||||| ||| |||||||||   ||||||||||| |||||||||||||||||||| || |||| ||||    
T  4490104 attgtttggataataatttaaagaattttcaaaatgatggaaatttatgatgtattttgttcaagttaaatttagagaatttcaaattacacataaa 4490200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 438 - 522
Target Start/End: Original strand, 24705440 - 24705524
Alignment:
Q  438 ataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| | |||||| ||||| ||  ||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  24705440 ataatttgaagaatttttaaaatgatagaaatttatgaaatattttgttcaagttaaatttaaagaatttcaaatgacacctaaa 24705524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 455 - 522
Target Start/End: Complemental strand, 13088692 - 13088625
Alignment:
Q  455 caaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||| ||||||||||||| | |||||||||||  ||||||||||||||||||| ||||||||||||    
T  13088692 caaaatgatgaaaatttatgaagtattttgttcaaattaaatttagagaatttcaaatgacacctaaa 13088625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 427 - 522
Target Start/End: Original strand, 52494002 - 52494096
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||||||||| || |||||| ||||  ||| ||||| ||| | |||||| |||| |||||||||||||||||||| ||||||||||||    
T  52494002 ttgtttggatgataattttgagaatttttaaaaggatggaaatt-atgaagtattttcttcaagttaaatttagagaatttcaaatgacacctaaa 52494096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 24062843 - 24062944
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||| ||| |||||||||||||| || |||||||||||| ||| |||||| || | ||||| || ||  ||||||||||||||||||| |||||| |||    
T  24062843 attcctttgattggatgataattttgagaattttcaaaatgatggaaatttgtgaagtatttagtccaatttaaatttagagaatttcaaatgacatcta 24062942  T
Q  521 aa 522  Q
    ||    
T  24062943 aa 24062944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 430 - 522
Target Start/End: Original strand, 10354423 - 10354515
Alignment:
Q  430 tttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| |||||||| | |||||||||||| |||  |||||||| | ||||||||||| |  |||| |||||||||||| ||||||||||||    
T  10354423 tttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagacaaatatagagaatttcaaatgacacctaaa 10354515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 426 - 514
Target Start/End: Original strand, 30303172 - 30303260
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatga 514  Q
    ||||||| ||||||||| || | |||||||||||||| | ||||||||| | ||||||| ||| |||||||||||| ||||||| ||||    
T  30303172 attgtttagatgataatatgaagaattttcaaaataaagtaaatttatgaactattttgatcaagttaaatttagaaaatttcaaatga 30303260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 56118627 - 56118529
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttc-aggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||| || |||||||| ||||||||||||||| || ||||||||  | |||||||||| | |||||||||| | ||||||| ||||||| ||||    
T  56118627 cattgtttgaataataatttgaataattttcaaaatagtggaaatttataaagtattttgttctaagttaaatttaaaaaatttcagatgacacataaa 56118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 17727028 - 17727086
Alignment:
Q  449 aattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaattt 507  Q
    |||||| ||||| ||||||||||||| |||||||||||||  || ||||||||||||||    
T  17727028 aatttttaaaatgatgaaaatttatgaaatattttgttcaaattgaatttagagaattt 17727086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 26534565 - 26534666
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||  | |||||||||||| ||  ||||| ||| | ||||||||| | || ||||||||| ||||| | ||||||||||    
T  26534565 attctattgtttggataataatttcaagaattttcaaaatgatagaaattcatgaagtattttgtttaagtcaaatttagaaaatttgaaatgacaccta 26534664  T
Q  521 aa 522  Q
    ||    
T  26534665 aa 26534666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 54566292 - 54566345
Alignment:
Q  466 aaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||| | ||||||||||| |||||||||| ||||||||| |||||||||    
T  54566292 aaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacct 54566345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 522
Target Start/End: Original strand, 36104891 - 36104986
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||| ||||| | |||||| |||||  | |||||||    ||||||||||||| |||| |||||| |||||||| |||||| |||||    
T  36104891 ttgtttggatgattatttgaagaatttttaaaatggtaaaaattttataaatattttgttcaagttatatttagtgaatttcaaatgacatctaaa 36104986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 18922545 - 18922480
Alignment:
Q  449 aattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatga 514  Q
    ||||||||| || ||  ||||||| | |||||||||| || |||||||||||||||||||| ||||    
T  18922545 aattttcaatatgatttaaatttacgaaatattttgtccaagttaaatttagagaatttcaaatga 18922480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 3e-26; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 8736442 - 8736341
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  8736442 attccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 8736343  T
Q  521 aa 522  Q
    ||    
T  8736342 aa 8736341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 13017851 - 13017951
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||    
T  13017851 attccattgtttggataataatttgaaggattttcaaaatgatgaaaatttatgaaata-tttgttcaagttaaatttagagaatttcaaatgacaccta 13017949  T
Q  521 aa 522  Q
    ||    
T  13017950 aa 13017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 20935778 - 20935879
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||||||||||||||| | |||||||||||| ||  ||||||||| | ||||||||| | |||||||||||||||||||| ||||||||||    
T  20935778 attccattgtttggatgataatttgaagaattttcaaaatgattgaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacaccta 20935877  T
Q  521 aa 522  Q
    ||    
T  20935878 aa 20935879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 28740668 - 28740769
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| |||||||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  28740668 attccattgtttagatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccta 28740767  T
Q  521 aa 522  Q
    ||    
T  28740768 aa 28740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 44255706 - 44255807
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  44255706 attctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 44255805  T
Q  521 aa 522  Q
    ||    
T  44255806 aa 44255807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 45094472 - 45094371
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| | |||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  45094472 attccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 45094373  T
Q  521 aa 522  Q
    ||    
T  45094372 aa 45094371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 740781 - 740877
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||||||||||| | |||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||| |||| |||||||    
T  740781 attgtttgaatgataatttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgagacctaaa 740877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 769108 - 769209
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| || |||||||    
T  769108 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacaccta 769207  T
Q  521 aa 522  Q
    ||    
T  769208 aa 769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 1583810 - 1583709
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||| | ||||||||||    
T  1583810 attccattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaattttaaatgacaccta 1583711  T
Q  521 aa 522  Q
    ||    
T  1583710 aa 1583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 7309764 - 7309663
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||| ||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  7309764 attccattatttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 7309665  T
Q  521 aa 522  Q
    ||    
T  7309664 aa 7309663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 14306804 - 14306707
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||  |||||||| ||||| ||||||||||||| | ||||||||||| |||||||||| ||||||||| ||||||||||||    
T  14306804 cattgtttggataataatttaaataatttttaaaatgatgaaaatttatgaattattttgttcaagttaaatttaaagaatttcaaatgacacctaaa 14306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 33189258 - 33189157
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| || |||||||    
T  33189258 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacaccta 33189159  T
Q  521 aa 522  Q
    ||    
T  33189158 aa 33189157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 35047680 - 35047579
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||| ||||||||| |||||||| |  ||||||||||||||| ||||||||  | ||||||||||| |||||||||||||||||||| ||||||||||    
T  35047680 attccaatgtttggataataatttgaagcattttcaaaataatggaaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 35047581  T
Q  521 aa 522  Q
    ||    
T  35047580 aa 35047579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 39630296 - 39630397
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  39630296 attctattgtttggataataatttgaactattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 39630395  T
Q  521 aa 522  Q
    ||    
T  39630396 aa 39630397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 424 - 519
Target Start/End: Original strand, 6749232 - 6749327
Alignment:
Q  424 ccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| ||||||||| |||||||||    
T  6749232 ccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacct 6749327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 3092354 - 3092455
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  |  ||||||||||| ||  ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  3092354 attccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacaccta 3092453  T
Q  521 aa 522  Q
    ||    
T  3092454 aa 3092455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 7611889 - 7611788
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| | |||||| | |||||||||||| ||| ||||||||| | |||||||| || |||||||||| ||||||||| ||||||||||    
T  7611889 attccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaagttaaatttaaagaatttcaaatgacaccta 7611790  T
Q  521 aa 522  Q
    ||    
T  7611789 aa 7611788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 11141381 - 11141478
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||| | ||||||||||||    
T  11141381 cattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaattttaaatgacacctaaa 11141478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 12263502 - 12263599
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| |   |||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  12263502 cattgtttggataataatttgaaattttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 12263599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 390 - 522
Target Start/End: Original strand, 1730095 - 1730225
Alignment:
Q  390 ttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcag 489  Q
    ||||||||||||||||| |  ||| ||||  ||| |||||||||||| |||||||| | |||||||||||| ||| || |||||| |  ||||||||||     
T  1730095 ttttgagggaatttaaa-tactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tttatgaagaattttgttcaa 1730192  T
Q  490 gttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||||||||||| ||||||||||||    
T  1730193 gttaaatttagagaatttcaaatgacacctaaa 1730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 7167664 - 7167567
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| | ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  7167664 cattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaa 7167567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 7228009 - 7227912
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| |||| ||||||| ||||||||||||    
T  7228009 cattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagaaaatttcaaatgacacctaaa 7227912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 17905726 - 17905825
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||| ||||||| |||||||| |  ||||||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17905726 attccatt-tttggataataatttgaaggattttcaaaatgatggaaatttatgaaatattt-gttcaagttaaatttagagaatttcaaatgacaccta 17905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 30698357 - 30698454
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| ||| |||| | |||||||||||| ||| |||||| || | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  30698357 cattgtttggataatagtttgaagaattttcaaaatgatggaaatttgtgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaa 30698454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 438 - 522
Target Start/End: Complemental strand, 28022088 - 28022004
Alignment:
Q  438 ataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| | ||||| |||||| |||||||||||||   ||||||||||| |||||||||||||||||||| ||||||||||||    
T  28022088 ataatttgaagaatttgcaaaatgatgaaaatttatgaggtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 28022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 522
Target Start/End: Original strand, 21504492 - 21504622
Alignment:
Q  390 ttttgagggaatttaaaattatttt-agatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttca 488  Q
    ||||||||||||| |||  |||||| ||||  ||||||||||||| || |||||||| | |||||||||||| | |  |||||||| | |||||||||||    
T  21504492 ttttgagggaattcaaa--tattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatgaagttaatttatgaagtattttgttca 21504589  T
Q  489 ggttaaatttagagaatttcatatgacacctaaa 522  Q
     ||||||||||||| |||||| ||||||||||||    
T  21504590 agttaaatttagag-atttcaaatgacacctaaa 21504622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 41585686 - 41585593
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||||| |||||||| | |||||| ||||| ||| ||||||||| | ||||||||| | |||||||||| ||||||||| |||||||||    
T  41585686 attgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttgaagttaaatttaaagaatttcaaatgacacct 41585593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 411 - 522
Target Start/End: Complemental strand, 2274799 - 2274689
Alignment:
Q  411 ttttagatagattccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcat 510  Q
    ||||||||  |||||||||||||||| | |||| ||| | |||||||||| ||| | ||||||| |  |||||||||| ||||||||||||||||||||     
T  2274799 ttttagatcaattccattgtttggataagaatt-ggagatttttcaaaatgatggagatttatgaagaattttgttcaagttaaatttagagaatttcaa 2274701  T
Q  511 atgacacctaaa 522  Q
    ||||||| ||||    
T  2274700 atgacacataaa 2274689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 32840189 - 32840092
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| ||| ||||| ||| | ||||||| ||| || ||||||||||||||| | || |||||||||    
T  32840189 cattgtttggataataatttgaagaattttcaaaatgatggaaattcatgaagtattttggtcaagtcaaatttagagaatttgaaataacacctaaa 32840092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 427 - 514
Target Start/End: Original strand, 42941011 - 42941098
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatga 514  Q
    |||||| || ||||||||||| |||||  || ||| || ||||||||| | ||||||||||| |||||||||||||||||||| ||||    
T  42941011 ttgttttgacgataatttggaaaatttaaaacatagtggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatga 42941098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 448 - 509
Target Start/End: Original strand, 2924823 - 2924884
Alignment:
Q  448 taattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    ||||||||||||| ||||||||||||  | ||||||||||| |||||| |||||||||||||    
T  2924823 taattttcaaaatgatgaaaatttattaagtattttgttcaagttaaaattagagaatttca 2924884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 502
Target Start/End: Complemental strand, 11981707 - 11981626
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagag 502  Q
    |||||||||||||||||| ||||| || |||||| ||||| || |||||||||| | | |||||| || |||||||||||||    
T  11981707 attccattgtttggatgagaatttagagaatttttaaaatgataaaaatttatggagtgttttgtccaagttaaatttagag 11981626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 32839649 - 32839548
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | ||||||| |||| ||| || || ||| | ||||||| ||| || ||||||||||||||| |  |||||||||    
T  32839649 attccattgtttggataataatttgaagaattttccaaatgatggaatttcatgaagtattttggtcaagtcaaatttagagaatttgaagtgacaccta 32839550  T
Q  521 aa 522  Q
    ||    
T  32839549 aa 32839548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 521
Target Start/End: Original strand, 767244 - 767345
Alignment:
Q  421 attccattgtttggatgat-aatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||| ||||| ||||| |||||||| || ||| ||||| ||| ||||||||| | | |||||| || ||| ||||| |||||||||| |||||||||    
T  767244 attccatggtttgtatgattaatttggaaaaattttaaaatgatggaaatttatgaagttttttgtccaagttcaattttgagaatttcaaatgacacct 767343  T
Q  520 aa 521  Q
    ||    
T  767344 aa 767345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 2701941 - 2701877
Alignment:
Q  456 aaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaa 521  Q
    ||||| ||||||||||||| |||||||||||||  ||||||||||||| ||| | |||||||||||    
T  2701941 aaaatgatgaaaatttatg-aatattttgttcaaattaaatttagagagttttaaatgacacctaa 2701877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 11595405 - 11595462
Alignment:
Q  465 aaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||  | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  11595405 aaaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 11595462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 11607307 - 11607364
Alignment:
Q  465 aaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||  | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  11607307 aaaatttataaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 11607364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 44205659 - 44205557
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttg-ttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||| ||| |||||||||||| ||| | |||||| ||||| ||| ||||||||| | | ||||  |||| |||||||||| | ||||||| |||||||||    
T  44205659 attctattatttggatgataaattgaagaattttgaaaatgatggaaatttatgaagtgtttttattcaagttaaatttaaaaaatttcaaatgacacct 44205560  T
Q  520 aaa 522  Q
    |||    
T  44205559 aaa 44205557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 36317458 - 36317421
Alignment:
Q  219 gggttggtctggtggtgttgacttgagaccttgaaata 256  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  36317458 gggttggtctgatggtgttgacttgagaccatgaaata 36317421  T

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Target: scaffold0318 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 421 - 519
Target Start/End: Original strand, 2938 - 3036
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| ||||||||| ||||||||||||| || ||||||||||||||| | |||||||||    
T  2938 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaaatattttgttcaagtcaaatttagagaatttgaaatgacacct 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 7e-24; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 6772207 - 6772110
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||||||||||||| |||||| ||||||  ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  6772207 cattgtttggatgataatttgaataattatcaaaacgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacgtaaa 6772110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 10314721 - 10314822
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||||||||||||| | ||||||||| | |||||||||| ||||||||| ||||||||||    
T  10314721 attctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttgtttaagttaaatttaaagaatttcaaatgacaccta 10314820  T
Q  521 aa 522  Q
    ||    
T  10314821 aa 10314822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 33146245 - 33146346
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||    
T  33146245 attccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacata 33146344  T
Q  521 aa 522  Q
    ||    
T  33146345 aa 33146346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 41762213 - 41762112
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| || |||||||    
T  41762213 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaataacaccta 41762114  T
Q  521 aa 522  Q
    ||    
T  41762113 aa 41762112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 927374 - 927474
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  |||||||||||| || ||||||||| | ||||||||||| ||||||||||||| |||||| ||||||||||    
T  927374 attccattgtttggataataatttgaagcattttcaaaata-tggaaatttatgaagtattttgttcaagttaaatttagaggatttcaaatgacaccta 927472  T
Q  521 aa 522  Q
    ||    
T  927473 aa 927474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 8674474 - 8674375
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||| | ||| ||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||    
T  8674474 attccattgtttggataataaat-ggagaatttccaaaattatgaaaatttatg-aatattttgttcaagttaaatttagagaatttcaaatgacacata 8674377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 9894320 - 9894219
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| | |||||||||||| |||  |||||||| | ||||||||||| |||||||| |||||| |||| ||||||||||    
T  9894320 attccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttaaattcagagaaattcaaatgacaccta 9894221  T
Q  521 aa 522  Q
    ||    
T  9894220 aa 9894219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 15270852 - 15270751
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||| || |||||||| | ||| |||||||| ||| ||||||||| | |||||| |||| |||||||||||||||||||| ||||||||||    
T  15270852 attccattgtttgaataataatttgtagaatattcaaaatgatggaaatttatgaagtattttattcaagttaaatttagagaatttcaaatgacaccta 15270753  T
Q  521 aa 522  Q
    ||    
T  15270752 aa 15270751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 17493163 - 17493066
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||  | |||||| || | |||||||||| ||||||||| ||||||||    
T  17493163 attccattgtttggatgataatttggagaattttcaaaatgatggaaatttataaagtatttttttaaagttaaatttaaagaatttcaaatgacacc 17493066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 35111303 - 35111399
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||||||| |||||||| | || ||||||||| ||||||||||||| | ||||||||| | |||||||||| ||||||||| ||||||||||||    
T  35111303 attgtttggataataatttgaagaactttcaaaatgatgaaaatttatgaagtattttgtttaagttaaatttaaagaatttcaaatgacacctaaa 35111399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 22303864 - 22303767
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||| | ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  22303864 cattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaatgacacctaaa 22303767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 34105147 - 34105244
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| |||||||| | |||||||||||| ||  ||||||| | | ||||||||| | |||||||||||||||||||| ||||||||||||    
T  34105147 cattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattttgtttaagttaaatttagagaatttcaaatgacacctaaa 34105244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 361 - 522
Target Start/End: Original strand, 35379356 - 35379515
Alignment:
Q  361 gatggggaatgttttgagatgacatacttttttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataattttcaaaat 460  Q
    |||||||||||||||||||| |  || | ||||||||||||| ||| || ||| |  |  |||  |||| ||||||||||||||| | | ||||||||||    
T  35379356 gatggggaatgttttgagataatgtaatgttttgagggaattcaaa-ttctttgaagtgaattttattgattggatgataatttgaaga-ttttcaaaat 35379453  T
Q  461 aatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
      || ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  35379454 ggtggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 35379515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 449 - 522
Target Start/End: Complemental strand, 40089787 - 40089714
Alignment:
Q  449 aattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||    
T  40089787 aattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaa 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 507
Target Start/End: Original strand, 14834900 - 14834982
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaattt 507  Q
    |||||||||||| |||||||| | |||||||||||| ||||||||||||| | |||||| |||| | ||||||||||||||||    
T  14834900 cattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtatttttttcaagctaaatttagagaattt 14834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 17542359 - 17542258
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||| || |||||||  | |||||| ||||| ||| ||||||||| | ||||||||||| ||| |||||||||||||||| |||||| |||    
T  17542359 attccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgttcaagttgaatttagagaatttcaaatgacatcta 17542260  T
Q  521 aa 522  Q
    ||    
T  17542259 aa 17542258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 28489535 - 28489636
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||| ||| |||||||  | |||||| ||||| ||| ||||||||| | || |||||||| |||||||||||||||||||| |||||| |||    
T  28489535 attccattgtttcgataataatttaaagaatttttaaaatgatggaaatttatgaagtagtttgttcaagttaaatttagagaatttcaaatgacatcta 28489634  T
Q  521 aa 522  Q
    ||    
T  28489635 aa 28489636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 8264585 - 8264681
Alignment:
Q  426 attgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| ||| |||||||| | ||||| |||||| ||| ||||||||| | |||||| |||| |||||||||||||||||| | ||||||||||||    
T  8264585 attgtttagataataatttgaagaatttccaaaatgatggaaatttatgaagtattttattcaagttaaatttagagaattttaaatgacacctaaa 8264681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 519
Target Start/End: Original strand, 30519082 - 30519173
Alignment:
Q  428 tgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||| |||||||| | |||||||||||| |||  |||||||| | ||||||||||| ||| |||||| ||||||||| |||||||||    
T  30519082 tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttcaatttaaagaatttcaaatgacacct 30519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 519
Target Start/End: Original strand, 30559422 - 30559513
Alignment:
Q  428 tgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacct 519  Q
    ||||||||| |||||||| | |||||||||||| |||  |||||||| | ||||||||||| ||| |||||| ||||||||| |||||||||    
T  30559422 tgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttcaatttaaagaatttcaaatgacacct 30559513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 427 - 509
Target Start/End: Complemental strand, 37241590 - 37241508
Alignment:
Q  427 ttgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||| ||| |||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| |||||||||    
T  37241590 ttgtttggataatattttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttca 37241508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 12479983 - 12480080
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||||||| ||| |||||||| | |||||||||||| ||| ||||| ||| | ||||||||||| |  ||||||||||||||| | ||||||||||||    
T  12479983 cattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttgttcaagacaaatttagagaatttgaaatgacacctaaa 12480080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 32250096 - 32249995
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||  | |||||| ||||| |||  |||||||| | |||||| |||| |||||||||| ||||||| | ||||||||||    
T  32250096 attccattgtttggataataatttaaagaatttttaaaatgatggtaatttatgaagtattttattcaagttaaatttaaagaattttaaatgacaccta 32249997  T
Q  521 aa 522  Q
    ||    
T  32249996 aa 32249995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 17492646 - 17492582
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgt 485  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||| | | ||||||||    
T  17492646 attccattgtttggatgataatttgaagaattttcaaaatgatgaaaatttaagaagtattttgt 17492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 421 - 499
Target Start/End: Original strand, 22305166 - 22305244
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaattta 499  Q
    |||||||||||||||| |||||||| | |||||||||||| | | ||||||||| | |||||| |||| ||||||||||    
T  22305166 attccattgtttggataataatttgtagaattttcaaaatgaaggaaatttatgaagtattttattcaagttaaattta 22305244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 31316233 - 31316321
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||| ||| |||||||||||||||| | ||||||  |||| ||| ||||||||| |  |||||||| | ||||||||||||||||||||    
T  31316233 attctattatttggatgataatttgaagaattttttaaatgatggaaatttatgaagcattttgtttaagttaaatttagagaatttca 31316321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 37241108 - 37241021
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| |||||||| | |||||| ||||| ||| ||||||||| | || |||||| | |||||||||| |||||||||    
T  37241108 attccattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagta-tttgttgaagttaaatttaaagaatttca 37241021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 522
Target Start/End: Original strand, 22768186 - 22768240
Alignment:
Q  468 atttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||||| | ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  22768186 atttatgaagtattttgttcaagttgaatttagagaatttcaaatgacacctaaa 22768240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 17444456 - 17444340
Alignment:
Q  391 tttgagggaatttaaaattattttagatagattccattgtttggatgataatttggataatttt-caaaataatgaaaatttatgcaatattttgttcag 489  Q
    ||||||||||||||||  ||||| || || |||| ||||||||||| || |||| || |||||| |||||| ||| ||||||||| | ||||||||        
T  17444456 tttgagggaatttaaa--tattt-aggtaaattctattgtttggataatgatttagagaatttttcaaaatgatggaaatttatgaagtattttgtctga 17444360  T
Q  490 gttaaatttagagaatttca 509  Q
    ||||||||||||||||||||    
T  17444359 gttaaatttagagaatttca 17444340  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 520
Target Start/End: Complemental strand, 21541512 - 21541470
Alignment:
Q  478 tattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  21541512 tattttgtacaagttaaatttagagaatttcaaatgacaccta 21541470  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 22302594 - 22302656
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatatttt 483  Q
    |||||||||||||||| |||||||| | | |||||||||| ||| ||||||||| | ||||||    
T  22302594 attccattgtttggataataatttgaagatttttcaaaatgatggaaatttatgaagtatttt 22302656  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 430 - 507
Target Start/End: Original strand, 11601120 - 11601196
Alignment:
Q  430 tttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaattt 507  Q
    |||||||||||||||| | ||||||||||||  ||  ||||| || | ||||||||||| |||||||||||| |||||    
T  11601120 tttggatgataatttgaagaattttcaaaattgtg-gaatttctgaagtattttgttcaagttaaatttagacaattt 11601196  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 18351839 - 18351806
Alignment:
Q  220 ggttggtctggtggtgttgacttgagaccttgaa 253  Q
    ||||||||||||||||| ||||||||||||||||    
T  18351839 ggttggtctggtggtgtagacttgagaccttgaa 18351806  T

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Target: scaffold0301 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 7223 - 7324
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||| ||||||| | | |||||| |||| |||||||||||||||||||| ||||||||||    
T  7223 attccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttattcaagttaaatttagagaatttcaaatgacaccta 7322  T
Q  521 aa 522  Q
    ||    
T  7323 aa 7324  T

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Target: scaffold0337 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 15867 - 15770
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| |||||||| | |||||||||||| |||  |||||||| | ||| ||||||| ||||||||||||||| |||| ||||||||    
T  15867 attccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagagaacttcaaatgacacc 15770  T

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Target: scaffold0337; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 16375 - 16287
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| || ||||| | |||||| ||||| ||| ||||||||  | ||||||||||| ||||||| ||||||||||||    
T  16375 attccattgtttggataatcatttgaagaatttttaaaatgatggaaatttataaagtattttgttcaagttaaatgtagagaatttca 16287  T

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Target: scaffold0169 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 4147 - 4247
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||| | |||||| ||||||||||||| ||||||||||    
T  4147 attctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt-aagttaaaattagagaatttcaaatgacaccta 4245  T
Q  521 aa 522  Q
    ||    
T  4246 aa 4247  T

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Target: scaffold0129 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 19782 - 19685
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||| ||| ||| |||||||| | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19782 cattatttagataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagataatttcaaatgacacctaaa 19685  T

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Target: scaffold0047 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 522
Target Start/End: Complemental strand, 50308 - 50207
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    ||||||||||||| || |||||||| | | |||||||||| ||| ||||||||| | || |||||||| |||||||||| ||||||||| ||||||||||    
T  50308 attccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaagtactttgttcaagttaaatttaaagaatttcaaatgacaccta 50209  T
Q  521 aa 522  Q
    ||    
T  50208 aa 50207  T

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Target: scaffold0065 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 2909 - 2812
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacc 518  Q
    |||||||||||||||| |||||||| | |||||||||||| |||  |||||||| | ||| ||||||| |||||||||||| || |||| ||||||||    
T  2909 attccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagataacttcaaatgacacc 2812  T

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Target: scaffold0065; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 9587 - 9499
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 509  Q
    |||||||||||||||| || ||||| | |||||||||||| ||| ||||||||  | ||||||||||| ||||||| ||||||||||||    
T  9587 attccattgtttggataatcatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagttaaatgtagagaatttca 9499  T

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Target: scaffold0039 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 109103 - 109203
Alignment:
Q  421 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacaccta 520  Q
    |||||||||||||||| | |||||| | |||||||||||| |||||| |||||  | |||||| |||| |||||||||||| ||||||| ||||||||||    
T  109103 attccattgtttggataagaatttgaagaattttcaaaatgatgaaa-tttataaagtattttattcaagttaaatttagataatttcaaatgacaccta 109201  T
Q  521 aa 522  Q
    ||    
T  109202 aa 109203  T

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Target: scaffold0014 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 221193 - 221096
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||| ||||||| ||||||||    ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  221193 cattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 221096  T

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Target: scaffold0014; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 223746 - 223649
Alignment:
Q  425 cattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttcatatgacacctaaa 522  Q
    |||| ||||||| ||||||||    ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  223746 cattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaa 223649  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 522
Target Start/End: Complemental strand, 11922 - 11855
Alignment:
Q  456 aaaataatgaaaatttatgcaatattttgttcag-gttaaatttagagaatttcatatgacacctaaa 522  Q
    ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||| ||| ||||||||    
T  11922 aaaatgatgaaaatttatgaagtattttgttcaaagataaatttagagaatttcaaatggcacctaaa 11855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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