View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2966_high_7 (Length: 400)

Name: NF2966_high_7
Description: NF2966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2966_high_7
NF2966_high_7
[»] chr5 (19 HSPs)
chr5 (53-333)||(19578850-19579130)
chr5 (63-241)||(43234868-43235046)
chr5 (53-226)||(41688606-41688778)
chr5 (53-240)||(18843716-18843903)
chr5 (60-240)||(23172376-23172560)
chr5 (88-242)||(18051506-18051660)
chr5 (54-242)||(21059098-21059285)
chr5 (75-242)||(22645681-22645849)
chr5 (60-192)||(19979648-19979780)
chr5 (53-233)||(27340131-27340307)
chr5 (120-241)||(20923718-20923839)
chr5 (82-241)||(38158224-38158383)
chr5 (60-196)||(20320988-20321123)
chr5 (167-239)||(19042444-19042516)
chr5 (175-239)||(20320926-20320990)
chr5 (103-143)||(21059045-21059085)
chr5 (100-142)||(19042406-19042448)
chr5 (168-221)||(24106661-24106714)
chr5 (194-242)||(24647938-24647986)
[»] chr1 (28 HSPs)
chr1 (61-242)||(9954984-9955165)
chr1 (60-241)||(23528656-23528837)
chr1 (53-241)||(13276207-13276395)
chr1 (64-239)||(19009898-19010073)
chr1 (53-242)||(9352004-9352193)
chr1 (53-240)||(42180006-42180193)
chr1 (53-242)||(18304752-18304941)
chr1 (75-239)||(12513283-12513447)
chr1 (54-242)||(13100190-13100378)
chr1 (53-242)||(9327154-9327345)
chr1 (53-223)||(16125396-16125569)
chr1 (55-243)||(25146712-25146899)
chr1 (103-242)||(41032661-41032800)
chr1 (53-242)||(21846215-21846398)
chr1 (53-205)||(17869691-17869843)
chr1 (53-241)||(9128781-9128969)
chr1 (108-242)||(17055995-17056129)
chr1 (61-164)||(18228278-18228380)
chr1 (54-152)||(32881416-32881514)
chr1 (53-142)||(47785958-47786047)
chr1 (166-241)||(30619075-30619150)
chr1 (155-241)||(14074413-14074499)
chr1 (137-242)||(18337547-18337651)
chr1 (154-241)||(12800623-12800710)
chr1 (137-242)||(24117006-24117111)
chr1 (196-242)||(47785791-47785837)
chr1 (137-238)||(27917477-27917578)
chr1 (103-143)||(13100391-13100431)
[»] chr4 (22 HSPs)
chr4 (60-240)||(17466080-17466260)
chr4 (54-243)||(5361905-5362094)
chr4 (53-242)||(36120823-36121012)
chr4 (53-242)||(13023566-13023758)
chr4 (54-242)||(8889227-8889415)
chr4 (61-219)||(9911360-9911518)
chr4 (120-241)||(8011224-8011345)
chr4 (87-242)||(13551597-13551752)
chr4 (53-241)||(9770112-9770300)
chr4 (53-239)||(5375666-5375852)
chr4 (53-245)||(37240258-37240445)
chr4 (53-242)||(10142898-10143087)
chr4 (137-240)||(7044728-7044831)
chr4 (53-242)||(23064902-23065093)
chr4 (138-241)||(4156763-4156866)
chr4 (136-242)||(6347088-6347194)
chr4 (148-242)||(24719516-24719610)
chr4 (176-241)||(46664421-46664486)
chr4 (137-237)||(7815561-7815661)
chr4 (106-143)||(4157053-4157090)
chr4 (137-242)||(7452419-7452523)
chr4 (197-242)||(8744087-8744132)
[»] chr7 (32 HSPs)
chr7 (60-242)||(26281258-26281439)
chr7 (53-240)||(5058530-5058717)
chr7 (53-241)||(4247356-4247544)
chr7 (62-242)||(27221417-27221597)
chr7 (61-241)||(5715290-5715469)
chr7 (53-241)||(24990012-24990200)
chr7 (53-241)||(44944786-44944978)
chr7 (53-242)||(24725418-24725607)
chr7 (60-242)||(14055250-14055432)
chr7 (60-242)||(14365278-14365460)
chr7 (97-241)||(22687649-22687793)
chr7 (92-239)||(8346513-8346660)
chr7 (87-242)||(9685219-9685374)
chr7 (74-242)||(8330007-8330175)
chr7 (53-220)||(8343740-8343908)
chr7 (76-232)||(11324988-11325143)
chr7 (85-243)||(7730316-7730473)
chr7 (115-241)||(11326386-11326512)
chr7 (60-213)||(17811375-17811528)
chr7 (103-244)||(39182257-39182397)
chr7 (120-243)||(8571241-8571364)
chr7 (53-172)||(20570826-20570945)
chr7 (83-205)||(27509914-27510036)
chr7 (103-201)||(1977692-1977790)
chr7 (82-242)||(26617442-26617606)
chr7 (120-241)||(21846434-21846554)
chr7 (138-241)||(30294175-30294275)
chr7 (88-143)||(6916878-6916933)
chr7 (103-143)||(4247557-4247597)
chr7 (138-242)||(21157800-21157904)
chr7 (137-242)||(26565653-26565758)
chr7 (103-143)||(24989661-24989701)
[»] scaffold0186 (1 HSPs)
scaffold0186 (53-242)||(8442-8631)
[»] chr6 (26 HSPs)
chr6 (53-241)||(15528051-15528239)
chr6 (53-243)||(30912353-30912543)
chr6 (61-242)||(7223518-7223692)
chr6 (53-242)||(17543681-17543870)
chr6 (82-241)||(17250057-17250216)
chr6 (54-223)||(23897829-23897998)
chr6 (53-241)||(26053237-26053425)
chr6 (53-241)||(26073290-26073478)
chr6 (103-242)||(27233268-27233407)
chr6 (74-243)||(11327533-11327702)
chr6 (69-241)||(7918338-7918510)
chr6 (53-242)||(19748332-19748521)
chr6 (53-242)||(21354747-21354928)
chr6 (120-242)||(6943468-6943590)
chr6 (82-238)||(2912218-2912373)
chr6 (60-242)||(17103201-17103376)
chr6 (75-233)||(22498848-22499006)
chr6 (87-242)||(10508998-10509153)
chr6 (149-242)||(18491074-18491167)
chr6 (162-242)||(5422798-5422878)
chr6 (164-239)||(3573984-3574059)
chr6 (139-221)||(4841946-4842026)
chr6 (194-242)||(10958269-10958317)
chr6 (103-143)||(30912294-30912334)
chr6 (1-33)||(33583522-33583554)
chr6 (109-141)||(33593057-33593089)
[»] chr8 (27 HSPs)
chr8 (53-242)||(5922048-5922237)
chr8 (53-242)||(11879599-11879788)
chr8 (53-242)||(11897015-11897204)
chr8 (53-239)||(15294672-15294858)
chr8 (53-239)||(15475041-15475227)
chr8 (60-239)||(19704403-19704583)
chr8 (54-242)||(27836406-27836594)
chr8 (54-242)||(31424162-31424350)
chr8 (90-241)||(17646993-17647144)
chr8 (54-237)||(3094185-3094378)
chr8 (60-241)||(45403029-45403210)
chr8 (53-193)||(23142223-23142363)
chr8 (63-223)||(22910153-22910313)
chr8 (53-202)||(6810861-6811009)
chr8 (53-203)||(29384258-29384407)
chr8 (53-242)||(7489224-7489414)
chr8 (60-237)||(6292290-6292467)
chr8 (62-171)||(32424402-32424511)
chr8 (60-152)||(9212203-9212295)
chr8 (166-243)||(477101-477178)
chr8 (139-242)||(15761466-15761569)
chr8 (115-221)||(15231744-15231850)
chr8 (193-242)||(23136348-23136397)
chr8 (138-223)||(24056594-24056679)
chr8 (103-143)||(29384200-29384240)
chr8 (190-242)||(9212296-9212348)
chr8 (103-143)||(17647198-17647238)
[»] chr3 (33 HSPs)
chr3 (75-242)||(29067283-29067450)
chr3 (53-242)||(8156071-8156261)
chr3 (85-241)||(20756039-20756195)
chr3 (54-242)||(24620142-24620333)
chr3 (60-242)||(28745769-28745957)
chr3 (53-238)||(39427905-39428090)
chr3 (90-240)||(3449270-3449419)
chr3 (82-236)||(17064326-17064480)
chr3 (89-242)||(22356029-22356183)
chr3 (54-168)||(42696920-42697034)
chr3 (82-232)||(21963438-21963587)
chr3 (82-232)||(21985874-21986023)
chr3 (69-223)||(22137296-22137449)
chr3 (55-226)||(22494731-22494895)
chr3 (115-241)||(30727694-30727820)
chr3 (108-241)||(24649684-24649818)
chr3 (147-242)||(17796376-17796471)
chr3 (147-242)||(19104816-19104911)
chr3 (95-242)||(25870350-25870506)
chr3 (137-242)||(27676355-27676460)
chr3 (147-242)||(17796267-17796362)
chr3 (147-242)||(19104707-19104802)
chr3 (137-242)||(15806531-15806635)
chr3 (147-242)||(17796485-17796580)
chr3 (147-242)||(19104925-19105020)
chr3 (137-219)||(10872971-10873053)
chr3 (53-113)||(15515197-15515257)
chr3 (162-240)||(28135723-28135801)
chr3 (103-143)||(42697049-42697089)
chr3 (194-237)||(42696870-42696913)
chr3 (103-143)||(6136457-6136497)
chr3 (109-141)||(6861033-6861065)
chr3 (103-143)||(25870210-25870250)
[»] chr2 (24 HSPs)
chr2 (54-240)||(35565896-35566082)
chr2 (53-239)||(31578007-31578192)
chr2 (61-242)||(31237926-31238107)
chr2 (63-242)||(1404782-1404961)
chr2 (54-242)||(36429847-36430035)
chr2 (74-243)||(20063712-20063881)
chr2 (69-242)||(30432418-30432591)
chr2 (74-242)||(15588812-15588979)
chr2 (120-239)||(25539234-25539353)
chr2 (115-243)||(23863324-23863452)
chr2 (114-241)||(19491855-19491983)
chr2 (135-242)||(1690785-1690892)
chr2 (60-158)||(1690676-1690774)
chr2 (142-241)||(16766710-16766809)
chr2 (138-242)||(5395674-5395778)
chr2 (139-242)||(17995054-17995157)
chr2 (138-213)||(34841584-34841659)
chr2 (139-205)||(31023259-31023325)
chr2 (103-143)||(13502561-13502601)
chr2 (103-143)||(15588742-15588782)
chr2 (162-242)||(19245152-19245232)
chr2 (103-143)||(35565845-35565885)
chr2 (103-142)||(27406993-27407032)
chr2 (136-242)||(15266081-15266187)
[»] scaffold0417 (1 HSPs)
scaffold0417 (53-242)||(7396-7585)
[»] scaffold0042 (2 HSPs)
scaffold0042 (60-243)||(93653-93835)
scaffold0042 (103-143)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (103-223)||(91-212)
[»] scaffold0036 (1 HSPs)
scaffold0036 (137-242)||(37191-37296)
[»] scaffold0048 (1 HSPs)
scaffold0048 (139-242)||(48816-48918)
[»] scaffold0603 (1 HSPs)
scaffold0603 (141-242)||(9049-9150)


Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-140; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 53 - 333
Target Start/End: Complemental strand, 19579130 - 19578850
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19579130 taataccaaatatatgttatgaatggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttatttt 19579031  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgtcagttgttg 252  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19579030 gggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatgtcagttgttg 19578931  T
Q  253 ctctgagtaatctttgcctaagtatgtcatatcctactagtactattatgaattattttaagtgtctataacatgaatata 333  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19578930 ctctgagtgatctttgcctaagtatgccatatcctactagtactattatgaattattttaagtgtctataacatgaatata 19578850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 43235046 - 43234868
Alignment:
Q  63 tatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctac 162  Q
    ||||| |||| ||||||  ||||  ||||||||||||||| |||||||||| |||| || ||||||||||||||||||||| | |||||| |||||||||    
T  43235046 tatatgttataaatggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctac 43234947  T
Q  163 tatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  43234946 tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 53 - 226
Target Start/End: Original strand, 41688606 - 41688778
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  41688606 taatactaaatatatgttatgaatggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttatttt 41688705  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttgg 226  Q
     | ||| ||||||  |||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  41688706 agaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-gaattttaggatttaagttgg 41688778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 18843903 - 18843716
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||| | |||||||||||||||||||||||||| || | | |||||||||||||||| ||||||  ||||||    
T  18843903 taatactaaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctatttt 18843804  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||| |||||||    
T  18843803 gggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 23172376 - 23172560
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggat----tttgcttattttggg 155  Q
    |||||||| |||  ||||||| ||||| |||||||||||||||||||| ||||| |||| |||| |||||||||||| |||    ||||  |||||||||    
T  23172376 aaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttggg 23172475  T
Q  156 attctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||||||||||||    
T  23172476 attctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 18051506 - 18051660
Alignment:
Q  88 ataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatga 187  Q
    |||||||||||||||||||||||||| || | |||||||||||||||||||||||||| |||||| | |||||||||| ||||| ||||||||||| |||    
T  18051506 ataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttga 18051605  T
Q  188 agaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||| ||||||||||||  |||||| ||||||||| || |||||||||||||||    
T  18051606 agaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 21059098 - 21059285
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| ||||||  ||||| ||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||| ||||| |    
T  21059098 aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttag 21059197  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||| |||||||| ||||||||||  |||||||| ||||||||||||  |||||| ||||||| | || |||||||||||||||    
T  21059198 ggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaatg 21059285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 22645681 - 22645849
Alignment:
Q  75 atggtaaatagttataaatgac-ttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaa 173  Q
    |||||| ||||| ||||||||| ||||||||||||||||  |||| ||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||    
T  22645681 atggtatatagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaa 22645780  T
Q  174 gtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     ||||||||| |||||||| ||||||||| ||| |||||| ||||||||| || |||||||||||||||    
T  22645781 atcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatg 22645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 19979780 - 19979648
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| | |||||||||||    
T  19979780 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattc 19979681  T
Q  160 tactatggatttaagtcgttgaagatgaagaaa 192  Q
    ||| ||| |||| ||||||||||||||||||||    
T  19979680 taccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 53 - 233
Target Start/End: Original strand, 27340131 - 27340307
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||  ||||||| |||||    ||||||||||||||||||||||  |||| || ||||||||||||||| ||||||| ||||||    
T  27340131 taatactaaatatatgttacaaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctatttt 27340226  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttg 233  Q
      ||||||||||| ||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||| || ||||||    
T  27340227 aagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 20923839 - 20923718
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||| ||| |||||| |||||    
T  20923839 tcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttaggattt 20923740  T
Q  220 aagttggaattttgacaacaat 241  Q
    |||| || ||||||||||||||    
T  20923739 aagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 38158224 - 38158383
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| |||||||| ||||||||||||||||| |||| |  ||| ||||||| ||||||||||  ||||||||||||||||| ||||||| ||| |||||    
T  38158224 atagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 38158323  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |  | |||||| ||||||||||||  |||||| ||||||||| |||||||||||||||||    
T  38158324 aagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 20321123 - 20320988
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| |||| || || || ||||||||||||||||||||||| || |||| ||||||||||| | |||| |||||   |||||||| |||     
T  20321123 aaatatatgttataaatgatatatggtcataaatgacttagtttataagaa-tcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattt 20321025  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcg 196  Q
    |||||||||||| |||| |||||| ||||||||||||    
T  20321024 tactatggattttagtcattgaaggtgaagaaaatcg 20320988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  167 gatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    ||||| ||||||||||| |||||||| || ||||||| | |||||||  ||||||||||| ||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  175 tcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    ||||||||| |||||||| | |||||||| | ||||||| |||||| ||||| ||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 21059045 - 21059085
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  21059045 tataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 19042406 - 19042448
Alignment:
Q  100 gtttataagaaatcataaagtcgcaatcaaaatcgatggattt 142  Q
    |||||||||||||| |||| ||||||||||||||||| |||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 24106714 - 24106661
Alignment:
Q  168 atttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaa 221  Q
    |||| ||||||||  | |||||||| | ||||||||||||||||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaa 24106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 24647986 - 24647938
Alignment:
Q  194 tcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  24647986 tcgcaatatcttaaattttaagatttaagtcggaattttgacaacaatg 24647938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 7e-65; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 9954984 - 9955165
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9954984 aatatatgttataaatggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattct 9955083  T
Q  161 actatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||  ||||||||||||||||||| |||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  9955084 acattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 60 - 241
Target Start/End: Complemental strand, 23528837 - 23528656
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||  |||| ||||||| ||||| ||||||||||| |||||||||||||| |||| ||||| ||||||||||| |||||||| |||||| ||||||    
T  23528837 aaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattc 23528738  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  23528737 tactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 13276207 - 13276395
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| |||| || ||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||| ||||||    
T  13276207 taatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctatttt 13276306  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
     ||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||| | || ||||||||||||||    
T  13276307 aggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 19009898 - 19010073
Alignment:
Q  64 atatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctact 163  Q
    |||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| | ||| ||||    
T  19009898 atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttact 19009997  T
Q  164 atggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    ||||||||||||| |||||| |||| ||| |||||||||||||||||||| |||||||||  | ||||||||||||    
T  19009998 atggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 9352004 - 9352193
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  ||||||    
T  9352004 taatactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctatttt 9352103  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||| ||| |||| ||||| |||| |||||| |||||||| |||||||| |||| |||||| ||||||||| || |||||||||||||||    
T  9352104 gggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatg 9352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 42180006 - 42180193
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| | |||||| |||| ||||||| ||||| |||||||||||||||||||||||||| || | || ||||||||||||||| ||||||| ||||||    
T  42180006 taatactatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctatttt 42180105  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    |  |||||||||||||||| | |||||||||  ||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  42180106 gaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 18304752 - 18304941
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||  |||||||||||| ||||| ||||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||  ||||||    
T  18304752 taatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgtaaa-tcgcaatcaaaattgatggattttgtctatttt 18304850  T
Q  153 gggattctactatggatttaagtcgtt-gaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    | |||||||||||| |||| ||||||| |||| |||||||| ||||||||| ||| |||||| |||||||||||| |||||||||||||||    
T  18304851 gagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 12513447 - 12513283
Alignment:
Q  75 atggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaag 174  Q
    |||||| |||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||  |||| |||||||||||| ||    
T  12513447 atggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgag 12513348  T
Q  175 tcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    ||||||||| |||||||| ||||||||||||  ||| || ||||||||| || ||||||||||||    
T  12513347 tcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 13100378 - 13100190
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||  ||||||| ||||| ||||||||||| |||||||||||||  |||| ||||||||||||||||||| |||||| ||||||     
T  13100378 aatactaaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctatttta 13100279  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||||||||||| ||||||||||  |||||||| ||| ||||||||  ||||||  ||||||||||| |||||||||| ||||    
T  13100278 ggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatg 13100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 9327154 - 9327345
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaa--tgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatt 150  Q
    |||||| |||||||| |||| ||||||| ||||| | |||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||    
T  9327154 taatactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctatt 9327253  T
Q  151 ttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||| |||||| ||||| ||||||||||| || ||||| |||||||| ||| ||||||| |||||||||  | ||||| |||||||||    
T  9327254 ttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 16125396 - 16125569
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||| | |||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||| ||||||    
T  16125396 taatactaaatatatgttataaatggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctatttt 16125495  T
Q  153 gggattctactatggatttaagtcgttgaagatg---aagaaaatcgcaaaatcctgaattttatgatttaagt 223  Q
      |||| ||||||||||||| |||||||||| ||   |||||| |||||||||||||||||||| |||||||||    
T  16125496 aagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagt 16125569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 243
Target Start/End: Original strand, 25146712 - 25146899
Alignment:
Q  55 ataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgg 154  Q
    |||| |||||||  |||| ||| ||| ||||| |||||| ||||||||||||||||||| |||| ||||||| ||||| |||| | ||||  ||||||||    
T  25146712 atactaaatatacgttataaattgtatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgg 25146810  T
Q  155 gattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||||||| |||||||||| |||||||||  | ||||||||||||||||    
T  25146811 gattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatgt 25146899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 41032661 - 41032800
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaat 202  Q
    ||||||||||  |||| ||||||| |||||||||||||||||| |||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  203 cctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||| || ||||||||| |  |||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 21846215 - 21846398
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| |||  || |||||||||||||||   |||||| | ||||   ||| ||||||||||||||||||||||||   ||||||    
T  21846215 taatactaaatatatgttataaattatatatagttataaatgac---gtttatgaaaaat---aaaatcgcaatcaaaatcgatggattttttctatttt 21846308  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    | ||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| |||||| ||||||| | || |||||||||||||||    
T  21846309 gagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 205
Target Start/End: Original strand, 17869691 - 17869843
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| || | ||| ||| || |||||||| ||||||||||| |||||||| |||| | |||||||||||||| | ||||||| ||||||    
T  17869691 taatactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctatttt 17869790  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcct 205  Q
     |||||||||| |||||||| ||||| |||| |||||||| ||||||||||||    
T  17869791 aggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcct 17869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 9128781 - 9128969
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| ||| |||| |||| ||||||| ||||| | |||| ||||||||||||||||||| | || |||||||||||||||||| ||||||  ||||||    
T  9128781 taatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctatttt 9128880  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
      |||||||||||  |||| ||||||| ||  |||||||| |||||| ||||| | ||||| ||||||||| |  ||||| ||||||||    
T  9128881 aagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 17055995 - 17056129
Alignment:
Q  108 gaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctga 207  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||   |||||||||||||| | ||||||||||| || ||||||| |||||||||||     
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  208 attttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| |  | |||||||| ||||||    
T  17056095 attttaggatttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 18228380 - 18228278
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||||| |||||| ||||| |||||||||||||||||| || |||||||||| |||||||||||| ||||||||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattct 18228282  T
Q  161 acta 164  Q
    ||||    
T  18228281 acta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 32881514 - 32881416
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    ||||| |||||||| |||| ||||||| ||||| || ||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  32881514 aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 47786047 - 47785958
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattt 142  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| | |||||||||| ||||||||||    
T  47786047 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  166 ggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 14074413 - 14074499
Alignment:
Q  155 gattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||| ||||||| |||||||||| ||||||||| ||||||||||||  |||||| ||||||||  || ||||||||||||||    
T  14074413 gattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||||| |||| ||| | ||||||||||| |||||| | | ||||| || |||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggatttta-ggtataagtcgggattttgaca 18337645  T
Q  237 acaatg 242  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||| |||||| ||||| ||||||||||  |||||||| ||| |||||||| ||||||| |||||||||||| ||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 24117111 - 24117006
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    |||||||| || ||||||||||||| |||  |||| | ||||||||| |||| ||| | | |||||| | |||||||  |||||| ||||||||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  237 acaatg 242  Q
    ||||||    
T  24117011 acaatg 24117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 47785837 - 47785791
Alignment:
Q  196 gcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||    
T  47785837 gcaaaatcctgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 27917477 - 27917578
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||||||||| ||| |||||| ||||| ||||  || ||||||| | || ||||||||||||||||  |||| |  |||||||| || |||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  237 ac 238  Q
    ||    
T  27917577 ac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 17466260 - 17466080
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||||| |||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||| ||||||    
T  17466260 aaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattc 17466161  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    || ||||||||| |||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  17466160 tattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 54 - 243
Target Start/End: Original strand, 5361905 - 5362094
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||  ||||||| ||| | |||||||||||||||||||||||||| |||| || |||||||||||||||| |||||| |||||||    
T  5361905 aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttg 5362004  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    | |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  5362005 gaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatgt 5362094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 36121012 - 36120823
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  36121012 taatactaaatatattttataaatggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttatttt 36120913  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     | ||| || ||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||| | ||||||||||||||||||    
T  36120912 agaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 13023758 - 13023566
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgctta--tt 150  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||   ||  ||    
T  13023758 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctatttt 13023659  T
Q  151 ttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaa-ttttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||||||||||||||| |||| |||||| |||||||| |||||||||||| || ||||| |||||||||||| |||||||||||||||    
T  13023658 ttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 8889415 - 8889227
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| ||||||| ||||| ||||| ||||| |||||||||||||| |||| |||||||||||||||||| ||||||| |||||||    
T  8889415 aatactaaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttg 8889316  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||| |||| |||| ||||||||| | |||||||| || |||||||||| |||||| ||||||||| || ||||||||| |||||    
T  8889315 ggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatg 8889227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 9911360 - 9911518
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||  ||||| |||||||    
T  9911360 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattct 9911459  T
Q  161 actatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    |||||||||||| | |||||||| |||||||| | |||||||| ||||||||| |||||    
T  9911460 actatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattt 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 8011224 - 8011345
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||    
T  8011224 tcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 8011323  T
Q  220 aagttggaattttgacaacaat 241  Q
     |||||| ||||||||||||||    
T  8011324 gagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 13551597 - 13551752
Alignment:
Q  87 tataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatg 186  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||||  |||||| ||||||||| ||||||||||| ||    
T  13551597 tataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtg 13551696  T
Q  187 aagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    || ||| |||||||||||| ||||||| ||| ||||| |  |||||||||||||||    
T  13551697 aaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 9770300 - 9770112
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||||||||||| ||||| |||| | ||||||||||||||||||| |||| ||||||||||||| ||| |||||||  ||||||    
T  9770300 taatactaaatatatgttatgaatggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctatttt 9770201  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
     |||||||||||||||||| ||||||||||| |||| ||| || |||||||||  ||||||  |||||||| |  ||||| ||||||||    
T  9770200 aggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 5375852 - 5375666
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| |||| || || || |||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||  ||||||    
T  5375852 taatactaaatatatgttataaatgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctatttt 5375753  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
       |||||| |||| |||| ||||||||||| |||||||| |||||||||| | |||||||  ||||| ||||| ||||||||||||    
T  5375752 aaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 245
Target Start/End: Complemental strand, 37240445 - 37240258
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| ||||||||  ||| ||||||| | ||| |||||||||||| ||||||||||||| |||| |||||||||||||||||| ||| ||| ||||||    
T  37240445 taatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctatttt 37240346  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgtca 245  Q
    ||| ||||||||||||||| ||||||||||| |||| ||| ||| ||    || ||||||| ||||||||| || ||||| ||||||||||||    
T  37240345 ggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatgtca 37240258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 10143087 - 10142898
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| | ||||| ||||| |||||||||||  ||||||||||||| |||| || ||||||||||||||||||||||  ||||||    
T  10143087 taatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctatttt 10142988  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    || ||| ||||||||| || |||| |||||| || ||||| |||||||||  | |||||||  |||||||| || ||||| |||||||||    
T  10142987 ggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 7044831 - 7044728
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| | |||||||| || |||||| ||||||||| || |||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  237 acaa 240  Q
    ||||    
T  7044731 acaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 23064902 - 23065093
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgactta--gtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatt 150  Q
    |||||| |||||||| |||| |||| || |  || ||||||||||||  |||||||||||||| |||| | ||||| |||||||||||||||  | ||||    
T  23064902 taatactaaatatatgttataaatgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctatt 23065001  T
Q  151 ttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    || | ||||||| |||||||| ||||||||||  |||||||| |  |||||| ||| ||||||  |||||||| ||  |||| |||||||||    
T  23065002 ttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    ||||||||||||||| |||||||||||  ||||| ||||||| ||| |||| ||| ||  |||||||| ||||||| ||||||||| || ||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  238 caat 241  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 6347088 - 6347194
Alignment:
Q  136 tggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgac 235  Q
    |||||||| | ||||||| || ||  |||||||||| ||||||||||| | || ||| | ||||||||||| |||||| |||||||||||||||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  236 aacaatg 242  Q
    || ||||    
T  6347188 aataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  148 attttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||| ||||||| |||||||||| ||||||||||| |||| ||| |||||||||| |||||||||  | |||||| |  |||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 46664421 - 46664486
Alignment:
Q  176 cgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaattttgacagcaat 46664486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| | ||| |||| ||| || |||||| ||| |||||| ||||||||| || ||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  237 a 237  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  106 aagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||||| ||| || ||| || |||||||||| | |||||||||| |||| ||| | ||||||| ||| ||||||  |||||||| || ||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggattga-gtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  237 acaatg 242  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 8744087 - 8744132
Alignment:
Q  197 caaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||    
T  8744087 caaaatcctgaatttttggatttaagtcggaatttcgacaacaatg 8744132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 26281258 - 26281439
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||  |||| ||||||| ||||| |||||||||||||||||||||||||| | || |||||| |||||||||||||||||||||||||||| ||||    
T  26281258 aaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaattc 26281356  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26281357 tacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatg 26281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 5058717 - 5058530
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||| ||||||    
T  5058717 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctatttt 5058618  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
      |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||| || |||||||||||||    
T  5058617 aagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 4247544 - 4247356
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||  |||| || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  4247544 taatactaaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctatttt 4247445  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||||||||||||||||| ||||||  |||||||| |  ||||||||||||||||| ||||||| |||| ||||||||||||||    
T  4247444 gggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 27221597 - 27221417
Alignment:
Q  62 atatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattcta 161  Q
    |||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||  |||||  |||||||    
T  27221597 atatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattcta 27221498  T
Q  162 ctatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  27221497 ctatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 5715469 - 5715290
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||| | |||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||||| |||||    
T  5715469 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattct 5715370  T
Q  161 actatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |||||| |||||||| ||||||| || | ||| |||||||||||||||||||| ||||||||| || ||||||||||||||    
T  5715369 actatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 24990012 - 24990200
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||| ||| ||||| |||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctatttt 24990111  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
     |||||||||||||||||| |||||||| || | |||||| || ||||||||| ||||||  ||||||||| |||||||||||||||||    
T  24990112 aggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 44944786 - 44944978
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||  |||| || ||||||||||||||||||||||  ||||||    
T  44944786 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactatttt 44944885  T
Q  153 gggattctactatggatttaagtcgttgaag----atgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
     |||||||||||||||||| | |||||||||     |||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||    
T  44944886 aggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 24725418 - 24725607
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| | || ||| ||||||||| |||||||||||| ||||||    
T  24725418 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctatttt 24725517  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    | ||||||||||||||||| ||| ||||||| |||||||| ||| |||||| || |||||| |||||||||  | |||||||||||||||    
T  24725518 gcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 14055432 - 14055250
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||||| ||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||||| | ||||    
T  14055432 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattc 14055333  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||| || |||||| ||| ||||| || ||||| |||||||||    
T  14055332 tactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 14365460 - 14365278
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||||| ||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||| |||||| | ||||    
T  14365460 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattc 14365361  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||| || |||||| ||| ||||| || ||||| |||||||||    
T  14365360 tactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 97 - 241
Target Start/End: Original strand, 22687649 - 22687793
Alignment:
Q  97 ttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcg 196  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| | |||||||| ||| ||||||| |||||||| |||    
T  22687649 ttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcg 22687748  T
Q  197 caaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |||| |||||||||||| ||||||||| || ||||||||||||||    
T  22687749 caaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 8346513 - 8346660
Alignment:
Q  92 atgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaa 191  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||||||    
T  8346513 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaa 8346612  T
Q  192 aatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    | |||||||||||| |||||||  ||||| ||  | ||||||||||||    
T  8346613 agtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 9685219 - 9685374
Alignment:
Q  87 tataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatg 186  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||||||  |||||| ||||||||| ||||||||||| ||    
T  9685219 tataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtg 9685318  T
Q  187 aagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    || ||| |||||||||||| ||||||| ||| ||||| |  |||||||||||||||    
T  9685319 aaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 74 - 242
Target Start/End: Original strand, 8330007 - 8330175
Alignment:
Q  74 aatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaa 173  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||| ||||||| |||||| ||| ||||| | ||||||||||||||||||||||||| |    
T  8330007 aatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttga 8330106  T
Q  174 gtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     ||||||||| |||||||| |||||||||| |||||||||  ||||| ||  | |||||||||||||||    
T  8330107 atcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 53 - 220
Target Start/End: Original strand, 8343740 - 8343908
Alignment:
Q  53 taataccaaatatatcttatgaa-tggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattt 151  Q
    |||||| ||||||| ||||| || ||||| ||| | ||| |||||||||||||||||||||| |||| ||||||| ||||| |||||||||| | |||||    
T  8343740 taatactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattt 8343839  T
Q  152 tgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattta 220  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| | |||||| ||||||    
T  8343840 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggattta 8343908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 11325143 - 11324988
Alignment:
Q  76 tggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagt 175  Q
    ||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||||| |||||| | |||||| ||||||||| |||    
T  11325143 tggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagt 11325045  T
Q  176 cgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaatttt 232  Q
    |||||||| ||||||||||| ||||||| ||||||||| ||||||||| || |||||    
T  11325044 cgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 7730316 - 7730473
Alignment:
Q  85 gttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaga 184  Q
    ||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||| | |||||||| |||||||| ||||||| ||| ||| |||     
T  7730316 gttataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaagg 7730415  T
Q  185 tgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    |||||||| |||||||| |||| |||||| |||||||||  | ||||||||||||||||    
T  7730416 tgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatgt 7730473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 115 - 241
Target Start/End: Complemental strand, 11326512 - 11326386
Alignment:
Q  115 taaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttat 214  Q
    |||| ||||||||||||||||| |||||||| ||||||  ||||||||||||||||| ||||| ||||| |||||||| |||||||||||| |||||||     
T  11326512 taaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttag 11326413  T
Q  215 gatttaagttggaattttgacaacaat 241  Q
    |||||||||||| ||||||||||||||    
T  11326412 gatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 17811528 - 17811375
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||  ||||||   ||||    
T  17811528 aaatatattttataaatggtatataattataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattc 17811429  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaatttta 213  Q
    |||||||||||| ||||||||||| |||| ||| || |||||||  ||||||||    
T  17811428 tactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcaagaatttta 17811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 39182397 - 39182257
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaat 202  Q
    ||||||||||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  203 cctgaattttatgatttaagttggaattttgacaacaatgtc 244  Q
    |||  |||||| |||||||||  | |||||| ||||||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaatgtc 39182257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 8571364 - 8571241
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    ||||||||||||||||||| ||||   |||||| |||||||||||||||||| ||||||| ||| |||||||| ||||||||||||| ||||||||||||    
T  8571364 tcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatgattt 8571265  T
Q  220 aagttggaattttgacaacaatgt 243  Q
    |||| || ||||||| ||| ||||    
T  8571264 aagtcgggattttgagaactatgt 8571241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 172
Target Start/End: Original strand, 20570826 - 20570945
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||  ||||||    
T  20570826 taatactaaatatatgttataaatggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttt 20570925  T
Q  153 gggattctactatggattta 172  Q
      ||||||||||| ||||||    
T  20570926 tagattctactatagattta 20570945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 27509914 - 27510036
Alignment:
Q  83 tagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaa 182  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||| ||||||   |||||||||| ||||| | |||||| |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  183 gatgaagaaaatcgcaaaatcct 205  Q
      |||||||||||||||||||||    
T  27510014 tgtgaagaaaatcgcaaaatcct 27510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 1977790 - 1977692
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaa 201  Q
    ||||||||||| |||| |||||||||||||||| | ||||||| |||||| |||||||||||||||||| ||||||||||| || | ||||||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 26617442 - 26617606
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttat--tttgggattctactat--ggatttaagtcg 177  Q
    ||||| |||||||||||||| || ||||  || |||| ||||||||||||||||| |||||||| |||  ||| | ||||||||||  | ||||| ||||    
T  26617442 atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcg 26617541  T
Q  178 ttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||  ||||||| | |||||||    
T  26617542 ttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatg 26617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 21846434 - 21846554
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    ||||||||||||||||| |||||| | | |||| | |||||||||||||| | ||||||||||  |||| ||| ||||||||||||||||||||  ||||    
T  21846434 tcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaattt 21846532  T
Q  220 aagttggaattttgacaacaat 241  Q
    |||| || ||||||||||||||    
T  21846533 aagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 30294275 - 30294175
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    |||||||| ||||||| |||| | |||||||||| |||||   ||| |||| |||||| |||||||||| |||||| |||||||||||| ||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T
Q  238 caat 241  Q
    ||||    
T  30294178 caat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 6916933 - 6916878
Alignment:
Q  88 ataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||||| ||||||||||||| |||| |||||||||||| |||||||||||    
T  6916933 ataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggatttt 6916878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 4247597 - 4247557
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 21157800 - 21157904
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    |||||| ||| |||| ||||| | |||||||||| |||||||| |  |||  ||| |||||||| ||||||||||| |||||||||  |||||| |||||    
T  21157800 gatttttcttgttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaa 21157899  T
Q  238 caatg 242  Q
    |||||    
T  21157900 caatg 21157904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 26565653 - 26565758
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    |||| |||| ||||||| |||||| ||||| |||| | ||||| ||  |||| ||| |  |||||| |||||||||||||||||||   |||||||||||    
T  26565653 ggatcttgcatattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgaca 26565752  T
Q  237 acaatg 242  Q
    ||||||    
T  26565753 acaatg 26565758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 24989661 - 24989701
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||| ||||| ||||| ||||||||||||||||||||||||    
T  24989661 tataggaaattataaaatcgcaatcaaaatcgatggatttt 24989701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 8631 - 8442
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| ||||||||  ||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  8631 taatactaaatatatggtataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttatttt 8532  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||| || ||||||||||||||||| |||||||| |||||||||| || |||||| ||||||||| || |||||||||||||||    
T  8531 gggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatg 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 15528051 - 15528239
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||    
T  15528051 taatactaaatatatgttataaatggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctatttt 15528150  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
      |||||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||    
T  15528151 aagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 53 - 243
Target Start/End: Original strand, 30912353 - 30912543
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| | || |||| || ||| | |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||||||    
T  30912353 taatactaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctatttt 30912452  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    | ||||||| ||||||||| ||||||||||| |||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  30912453 gtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatgt 30912543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 7223692 - 7223518
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  7223692 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattct 7223593  T
Q  161 actatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||||||||       || |||||||| |||||||||||| ||||||| ||||||||| || |||||||||||||||    
T  7223592 actatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 17543681 - 17543870
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| |||||  ||||||||||||||||||||||||  |||| |||||||||||||| || |||||||||||||||    
T  17543681 taatactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttatttt 17543780  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
      ||||||||||||||||| ||||||||||  |||| ||| |||||||||||||||||||| ||||||||| |  |||||||||||||||    
T  17543781 aagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 82 - 241
Target Start/End: Complemental strand, 17250216 - 17250057
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  17250216 atagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttga 17250117  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    || |||||||| | ||||||||||| |||||| ||||||||| || ||||| ||||||||    
T  17250116 aggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 23897998 - 23897829
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||||     
T  23897998 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctatttta 23897899  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagt 223  Q
    | ||| |||||||||||| ||||||||||  |||||||| ||||||||||||| |||||| |||||||||    
T  23897898 gaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagt 23897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 26053237 - 26053425
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| || ||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| |||| |  |||||||||| |||||||||||||||||||    
T  26053237 taatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttatttt 26053336  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||| |||| |||| |||| |||||| |||||||| ||||||||||||  |||||| ||||||||| || ||||||||||||||    
T  26053337 gggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 26073290 - 26073478
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| || ||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| |||| |  |||||||||| |||||||||||||||||||    
T  26073290 taatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttatttt 26073389  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||| |||| |||| |||| |||||| |||||||| ||||||||||||  |||||| ||||||||| || ||||||||||||||    
T  26073390 gggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 27233268 - 27233407
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaat 202  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  203 cctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||| |||||| ||||||||| || | |||||||||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 11327533 - 11327702
Alignment:
Q  74 aatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaa 173  Q
    ||||||| | ||| |||||||| |||||| |||||||| | |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  11327533 aatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaa 11327632  T
Q  174 gtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    ||| |||||||||||||||| ||||||| | || |||||| | ||||||| || ||||||||||||||||    
T  11327633 gtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatgt 11327702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  69 ttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatgga 168  Q
    |||| |||| || ||||| |||||||||||| ||||||| |||||  ||| || |||||||||||||| |||||||||||| || ||||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  169 tttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||  |||||||| || ||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 19748521 - 19748332
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| |||| || |||||  ||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||| ||||||    
T  19748521 taatactaaatatattttataaatgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctatttt 19748422  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
      |||||||||| |||||| |||| || ||| ||||||||||| |||||||||| ||| || ||||||||| || ||||||| |||||||    
T  19748421 aagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaatg 19748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 21354928 - 21354747
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||||  ||||||    
T  21354928 taatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctatttt 21354829  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||| |||||||||||||||||||| | |||        ||| ||| | |||||| |||||||||||| |||||||||||||||    
T  21354828 gggattctaccatggatttaagtcgttgaaggtaaag--------aaagtccaggattttaggatttaagttgggattttgacaacaatg 21354747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 6943468 - 6943590
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    |||||||||||||||||| ||||||  ||||||| ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |||||    
T  6943468 tcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 6943567  T
Q  220 aagttggaattttgacaacaatg 242  Q
    |||| || |||||||||||||||    
T  6943568 aagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| ||||||||||| |||||||| ||||| |||| | |||||||||||||||| ||||||||||||||  ||||||||||| ||||| | |||||||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttga 2912316  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaac 238  Q
    ||||| ||||| | |||||||||| ||||||| ||||||||| || |||||||||||    
T  2912317 agatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 17103376 - 17103201
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| | || |||| || |||||  ||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||  |||||||||||||    
T  17103376 aaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattc 17103277  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||| |||| ||||||||||  ||       |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  17103276 tactatgcatttgagtcgttgaaagtg-------tcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 22498848 - 22499006
Alignment:
Q  75 atggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaag 174  Q
    |||||| ||||| ||||||||||| |||||||||||||| |||| | ||||| |||||||||||||||||  ||||||| |||| |||||||||||| ||    
T  22498848 atggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgag 22498947  T
Q  175 tcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttg 233  Q
    ||||| ||| |||||||| |||||||||  || | |||| ||||| |||||| ||||||    
T  22498948 tcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 10508998 - 10509153
Alignment:
Q  87 tataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatg 186  Q
    ||||||||||||||||||||| || || |||| ||| |||||||||||||| ||||||| |||||||||||||||||||  |||| |||| |||||  ||    
T  10508998 tataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtg 10509097  T
Q  187 aagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| || |||| | |||||||||| |||||||||  | |||||||||| ||||    
T  10509098 aagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatg 10509153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 18491074 - 18491167
Alignment:
Q  149 ttttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||||| |||||||||| ||||||||||| |||| |||   ||||||| ||| |||||| ||||||||| || ||||||||| |||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaatg 18491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 5422798 - 5422878
Alignment:
Q  162 ctatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||| ||||| ||||||||||| |||| ||| | |||||||| |||||||||  |||||||| || |||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatg 5422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  164 atggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    |||||||| ||||||||||| |||||||| |||| |||| ||| ||||||  |||||||| |||||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  139 attttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaa 221  Q
    ||||||| |||| ||||||||| ||| |||||| ||||||||||| |||| ||| |||||||||||  ||||||| |||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 10958269 - 10958317
Alignment:
Q  194 tcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  10958269 tcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatg 10958317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 30912294 - 30912334
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||||||| | ||||||||| ||||||||||||||    
T  30912294 tataagaaatcatagaatcgcaatcataatcgatggatttt 30912334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33583522 - 33583554
Alignment:
Q  1 aagattttacttaaggacttttctagaatcgat 33  Q
    |||||||||||||||||||||| ||||||||||    
T  33583522 aagattttacttaaggacttttgtagaatcgat 33583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 33593057 - 33593089
Alignment:
Q  109 aaatcataaagtcgcaatcaaaatcgatggatt 141  Q
    |||||||||| ||||||||||||||||||||||    
T  33593057 aaatcataaaatcgcaatcaaaatcgatggatt 33593089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 5922237 - 5922048
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||||||||||| ||||| ||||||||| || |||||||||||||  ||| |||||||||||||||||||||||||  ||||||    
T  5922237 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctatttt 5922138  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||||||||||| ||||||||||||| |||||||| || |||||||||| |||||| ||||||||| || |||||||||||||||    
T  5922137 gggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 5922048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 11879788 - 11879599
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||| | ||||||    
T  11879788 taatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctatttt 11879689  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     |||||||||||| ||||| ||||||||||  |||||||| | |||||||||||||||||| |||||||||  |||||||||||||||||    
T  11879688 aggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 11897204 - 11897015
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||| | ||||||    
T  11897204 taatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctatttt 11897105  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     |||||||||||| ||||| ||||||||||  |||||||| | |||||||||||||||||| |||||||||  |||||||||||||||||    
T  11897104 aggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 15294858 - 15294672
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||  ||| ||  ||||| |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||    
T  15294858 taatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctatttt 15294759  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    || |||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||||| || ||||| ||||||    
T  15294758 ggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 15475227 - 15475041
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||  ||| ||  ||||| |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||    
T  15475227 taatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctatttt 15475128  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
    || |||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||||| || ||||| ||||||    
T  15475127 ggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 19704403 - 19704583
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||  ||||||| ||||| |||||| |||| |||||||||||||| |||| | |||||||||||||||||||||||| |||| ||| ||||    
T  19704403 aaatatatgttacaaatggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattc 19704502  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcc-tgaattttatgatttaagttggaattttgacaaca 239  Q
    |||||||||||| ||||||||||| |||||||| |||||||| || ||||||||| |||||||||||| ||||||||||||    
T  19704503 tactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 27836406 - 27836594
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| ||||| || |||| ||||||| ||||| |||||||||||||||||||||||||  |||| | | ||||||||| |||| ||||||||||||||     
T  27836406 aatactaaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttatttta 27836505  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    | |||||||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  27836506 gaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaatg 27836594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 31424350 - 31424162
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| | ||||| ||||| ||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||| |||||||    
T  31424350 aatactaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttg 31424251  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||| |||||||||| ||||||||||   ||||||| ||| ||||||||||||||||  ||||||||  | |||||||||| ||||    
T  31424250 ggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 90 - 241
Target Start/End: Complemental strand, 17647144 - 17646993
Alignment:
Q  90 aaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaag 189  Q
    ||||||||  |||||||||||||| | || |  ||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||||| |||||    
T  17647144 aaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaag 17647045  T
Q  190 aaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17647044 aaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 54 - 237
Target Start/End: Original strand, 3094185 - 3094378
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttata----------agaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||          | ||||| |||| ||||||||||||||||||||||||    
T  3094185 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggatttt 3094284  T
Q  144 gcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    || |||||| |||||||||||||||||| ||||||||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||||||    
T  3094285 gcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 60 - 241
Target Start/End: Complemental strand, 45403210 - 45403029
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||  | ||||||||||| ||| ||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  45403210 aaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattc 45403111  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    | |||||||||||||||||||||| | |||||| |||||||||| || ||||||  |||||||| |  ||||||||||||||    
T  45403110 ttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 53 - 193
Target Start/End: Complemental strand, 23142363 - 23142223
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  23142363 taatactaaatatatgttataaatggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 23142264  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaa 193  Q
     |||||||||||||||||| ||||||||||| |||||||||    
T  23142263 aggattctactatggatttcagtcgttgaagttgaagaaaa 23142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 223
Target Start/End: Original strand, 22910153 - 22910313
Alignment:
Q  63 tatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctac 162  Q
    ||||| |||| ||||||| ||||| |||||| ||||| ||||||||||||| |||| |||||||||||||| ||||||||||| ||||||  ||||||||    
T  22910153 tatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctac 22910252  T
Q  163 tatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagt 223  Q
    ||| ||||| ||||||||||  |||||||| ||| |||||||| ||||||| |||||||||    
T  22910253 tatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagt 22910313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 202
Target Start/End: Complemental strand, 6811009 - 6810861
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| |||| || ||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||| |||||||| ||||||    
T  6811009 taatactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttgcctatttt 6810911  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaat 202  Q
       |||||||||||||||| ||||||||||| |||||||| |||||||||    
T  6810910 aaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 53 - 203
Target Start/End: Original strand, 29384258 - 29384407
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||| ||  ||||||||||||| |||| ||||||||||| |||||| ||||||| ||||||    
T  29384258 taatactaaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttt 29384356  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatc 203  Q
     ||||| |||||||||||| ||||||||||| |||||||| ||||||||||    
T  29384357 tggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatc 29384407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 7489224 - 7489414
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttat--- 149  Q
    |||||| |||||||| |||| |||| || ||||| |||||||||||| |||||||||||||||||| | |||||||||||||||  ||||||  |||       
T  7489224 taatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctatttt 7489323  T
Q  150 -tttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     ||| | ||||||||| |||||| ||||||||||| ||||||||   ||||||| ||| |||||| ||||||| | || |||||||||| ||||    
T  7489324 atttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaataatg 7489414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 6292290 - 6292467
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattc 159  Q
    |||||||| |||| ||||||| ||||| ||||||||||||| |||||| ||||  |||   |||||||||||||| || ||||| |||||||| | |||     
T  6292290 aaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattttagaatta 6292389  T
Q  160 tactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    |||||||| ||| ||||||| |||||||| ||| || ||||||| | ||||||| ||||||||| || ||||| ||||    
T  6292390 tactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 32424511 - 32424402
Alignment:
Q  62 atatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattcta 161  Q
    |||||| |||| ||||||| ||||| |||||||||||||| ||||| ||||| |||| |||||||||||||| ||  ||||||  |||||| ||||||||    
T  32424511 atatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattcta 32424412  T
Q  162 ctatggattt 171  Q
    ||||| ||||    
T  32424411 ctatgaattt 32424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 9212203 - 9212295
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||||  |||| ||||||| || || |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| | ||||||    
T  9212203 aaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 477101 - 477178
Alignment:
Q  166 ggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    ||||||||||| |||||| |||||||| || |||||||||| |||||| |||||||||  | ||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatgt 477178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 15761466 - 15761569
Alignment:
Q  139 attttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaac 238  Q
    ||||||| |||||||||||| | ||||| |||| ||||||||||| | || ||| || |||||||||| | |||| ||||||||| |  |||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  239 aatg 242  Q
    ||||    
T  15761566 aatg 15761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 15231850 - 15231744
Alignment:
Q  115 taaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttat 214  Q
    |||| |||||||||||   | |||||||||| ||||||  |||| || |||| |||| ||||||||||| ||||||| ||||||||||| | || ||||     
T  15231850 taaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagtttag 15231751  T
Q  215 gatttaa 221  Q
    |||||||    
T  15231750 gatttaa 15231744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 23136397 - 23136348
Alignment:
Q  193 atcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||||||||||||||| ||||||||| || |||||||||| ||||    
T  23136397 atcgcaaaatcctgaattttaggatttaagtcgggattttgacaataatg 23136348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 24056594 - 24056679
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagt 223  Q
    |||||||  ||||||||||||   |||||||||| ||||||| ||  |||| ||| ||||||||||||| |||||| |||||||||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagt 24056679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 9212296 - 9212348
Alignment:
Q  190 aaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||||| |||  |||||| |||||||||  |||||||||||||||||    
T  9212296 aaaatcgcaaaaacctagattttaggatttaagtgagaattttgacaacaatg 9212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 17647238 - 17647198
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 29067450 - 29067283
Alignment:
Q  75 atggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaag 174  Q
    |||||| ||||| |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||  ||||||||||||||||||||||||| ||    
T  29067450 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgag 29067351  T
Q  175 tcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||||| |||||||| ||||||||||||||||||||  |||||||| || |||||||||||||||    
T  29067350 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatg 29067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 8156071 - 8156261
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttg-cttattt 151  Q
    |||||| |||||||| |||| ||||||| |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||    
T  8156071 taatactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattt 8156170  T
Q  152 tgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||| |||||||||||| |||| |||||| |||| ||||||| ||||| ||||||||||  ||||||||||| |||||||||||||||    
T  8156171 tgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatg 8156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 85 - 241
Target Start/End: Complemental strand, 20756195 - 20756039
Alignment:
Q  85 gttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaga 184  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||| ||||||  ||||||||||||||||| |||| ||||||     
T  20756195 gttataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaagg 20756096  T
Q  185 tgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  20756095 tgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 24620142 - 24620333
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| ||||||| ||| | |||||||||||||||||||||||||| |||| | ||||| |||||||||| ||||||| |||||||    
T  24620142 aatactaaatatattttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttg 24620241  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaa---atcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     ||||||||| || |||| ||||||||||| ||||||||    |||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  24620242 agattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 28745957 - 28745769
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataa------gaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    |||||||| |||| ||| ||| ||||| ||||||||||||||||||||      |||||| |||| |||||||||||||||||| ||||||  |||||||    
T  28745957 aaatatatgttataaatagtatatagtcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttg 28745858  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     |||||||||||| |||| ||||||||||| |||||||| |||||||||||| ||||||| ||||||| | || |||||||||||||||    
T  28745857 agattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 39428090 - 39427905
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| | | ||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||  ||||||    
T  39428090 taatactaaatatatgttataagtagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctatttt 39427991  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaac 238  Q
    ||||||||||||| ||||| ||||||||||  |||||||| | ||||||||| | ||||||  |||||| | || |||||||||||    
T  39427990 gggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 3449270 - 3449419
Alignment:
Q  90 aaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaag 189  Q
    |||||||||| ||||||||||||| |||| ||||||| |||||| ||||||||||| |||||| |||||||||||| ||||| || |||||||| | |||    
T  3449270 aaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaag 3449368  T
Q  190 aaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    ||| |||||||||||||||||||| ||||||||| || |||||||||||||    
T  3449369 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 17064480 - 17064326
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||  |||||| | ||||||||||| |||  |||||||||    
T  17064480 atagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttga 17064381  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    || |||| | |||||||||||||||||||||| ||||||||| || |||||||||    
T  17064380 aggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 22356029 - 22356183
Alignment:
Q  89 taaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatg-a 187  Q
    ||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||| ||||||||||||| ||| || | ||||||| || |    
T  22356029 taaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaa 22356128  T
Q  188 agaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    | ||||||  |||||||||||||||| ||||||||| |||||||||| |||||||    
T  22356129 aaaaaatcttaaaatcctgaattttaggatttaagtcggaattttgataacaatg 22356183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 42697034 - 42696920
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| |||||||    
T  42697034 aataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttg 42696935  T
Q  154 ggattctactatgga 168  Q
     ||||||||||||||    
T  42696934 agattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 21963587 - 21963438
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| ||||||||||||||  ||||||||||  ||| |||| ||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||| |    
T  21963587 atagtcataaatgacttagtaaataagaaatcgaaaa-tcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttca 21963489  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaatttt 232  Q
    || |||||||| ||| |||||| ||||||||| ||||||||| || |||||    
T  21963488 aggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 21986023 - 21985874
Alignment:
Q  82 atagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttga 181  Q
    ||||| ||||||||||||||  ||||||||||  ||| |||| ||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||| |    
T  21986023 atagtcataaatgacttagtaaataagaaatcgaaaa-tcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttca 21985925  T
Q  182 agatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaatttt 232  Q
    || |||||||| ||| |||||| ||||||||| ||||||||| || |||||    
T  21985924 aggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 22137449 - 22137296
Alignment:
Q  69 ttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatgga 168  Q
    |||| ||| ||| ||||| ||||||||||||||  ||||||||||  ||| ||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  22137449 ttataaatagtatatagtcataaatgacttagtaaataagaaatcgaaaa-tcgcaattaaaatcgatggattttgcatattttgggattttactatgga 22137351  T
Q  169 tttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagt 223  Q
    ||| || |||| ||| |||||||| ||| || ||| ||||||||| |||||||||    
T  22137350 tttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagt 22137296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 226
Target Start/End: Original strand, 22494731 - 22494895
Alignment:
Q  55 ataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgg 154  Q
    |||| |||||||| |||| ||||||| ||||| |||| |||||||||||||       | |||| |||||||||||||||||| |||||| ||||||| |    
T  22494731 atactaaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttag 22494823  T
Q  155 gattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttgg 226  Q
    |||||||||||| |||| ||||||||||| |||| ||| ||||||||||    |||||| ||||||||||||    
T  22494824 gattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagttgg 22494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 241
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  115 taaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttat 214  Q
    |||| |||||||||||||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||| |||||||| ||| ||||| | | ||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  215 gatttaagttggaattttgacaacaat 241  Q
    |||||||||  | ||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  108 gaaatcataaagtcgcaatcaaaatcgatggattttgctt-attttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctg 206  Q
    |||||| |||| || || ||||||| |||| ||||||||| ||||||| |||||||||||||||| ||||||||||| ||||| || ||  ||||||||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  207 aattttatgatttaagttggaattttgacaacaat 241  Q
     |||||| ||||||||| || ||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 17796471 - 17796376
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| ||| ||| ||||||||  |||||||||||||||| ||||||||||||||||||    
T  17796471 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 19104911 - 19104816
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| ||| ||| ||||||||  |||||||||||||||| ||||||||||||||||||    
T  19104911 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 242
Target Start/End: Original strand, 25870350 - 25870506
Alignment:
Q  95 acttagtttataagaaatcataaagtcgcaatcaaaatc-----gatggattttgcttattttgggattctactatggatttaagtcgt----tgaagat 185  Q
    ||||| ||||||||||||| |||| ||||||||||||||     |||||||||||| ||||||| | |||||||| | |||| ||||||    |||||||    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  186 gaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||||||| || ||||||| || |||||| ||||||||| |  |||||||||||||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaatg 25870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||| | |||||||||||||| |||||||||| |||| | |||| |||| ||| ||||||||||||| |||||| |||||||||  | |||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  237 acaatg 242  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 17796362 - 17796267
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||| ||| ||||||| |||| ||| || |||||||||  |||||||||||||||||||||||||||||| ||||    
T  17796362 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 19104802 - 19104707
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||| ||| ||||||| |||| ||| || |||||||||  |||||||||||||||||||||||||||||| ||||    
T  19104802 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 15806531 - 15806635
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||||| | |||||||||||| |||||||||| |||| |||||| |||| ||| ||||||||| ||| ||| || ||||||||| || |||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtcgg-attttgaca 15806629  T
Q  237 acaatg 242  Q
    ||||||    
T  15806630 acaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 17796580 - 17796485
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||||||| ||||||| |||| ||| ||| ||||||||  |||||||||||||| | | ||||||||||||||||    
T  17796580 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 19105020 - 19104925
Alignment:
Q  147 tattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| ||||||| ||||| |||||||| ||||||| |||| ||| ||| ||||||||  |||||||||||||| | | ||||||||||||||||    
T  19105020 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 10872971 - 10873053
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    ||||||||| ||||||| |||||| |||||||||| ||||||||||| |||| || ||| |||||||||| |||||| |||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggattt 10873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 15515197 - 15515257
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatc 113  Q
    |||||| |||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||    
T  15515197 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatc 15515257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  162 ctatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    |||||||||| ||||  ||||  |||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 42697089 - 42697049
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42697089 tataagaaatcataaactcgcaatcaaaatcgatggatttt 42697049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 42696913 - 42696870
Alignment:
Q  194 tcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  42696913 tcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 6861033 - 6861065
Alignment:
Q  109 aaatcataaagtcgcaatcaaaatcgatggatt 141  Q
    |||||||||| ||||||||||||||||||||||    
T  6861033 aaatcataaaatcgcaatcaaaatcgatggatt 6861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 35565896 - 35566082
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||| ||| ||| ||||| ||||||||||| |||||||||||||| ||||   |||||||||||||||||||||||| |||||||    
T  35565896 aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttg 35565995  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    ||||||||| |||||||| |||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  35565996 ggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 31578192 - 31578007
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| |||| ||||||| ||||| |||||||||||||||||||| ||||| |||| | ||||||||||| |||||||||||||||||||    
T  31578192 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttatttt 31578093  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaaca 239  Q
     ||||||||||| |||||||| ||||||||| ||||||||||||||||||| | |||||||  |||||||| || ||||||||||||    
T  31578092 aggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 31237926 - 31238107
Alignment:
Q  61 aatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattct 160  Q
    ||||||| |||| ||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | ||||||  ||||||    
T  31237926 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattct 31238025  T
Q  161 actatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||| |||| ||||||||||| |||||||| | ||||||||||  |||||| ||||||||| || |||||||||||||||    
T  31238026 actatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatg 31238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 1404961 - 1404782
Alignment:
Q  63 tatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctac 162  Q
    ||||| |||| ||||||  ||||| |||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||| || ||| |||||||||    
T  1404961 tatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctac 1404862  T
Q  163 tatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     |||||||||||||||||||| |||||||| || ||||||||| |||||||  |||||||| || |||||||||||||||    
T  1404861 aatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 242
Target Start/End: Complemental strand, 36430035 - 36429847
Alignment:
Q  54 aataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttg 153  Q
    ||||| |||||||| |||  |||| || ||||| |||||| ||||||||||||||||||| || | |||||||||||||||||||||||||| |||||||    
T  36430035 aatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttg 36429936  T
Q  154 ggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     |||||| ||||| | || ||||||||||| |||||||| ||||||||||||  ||| || |||||||||||| |||||||||||||||    
T  36429935 agattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 20063881 - 20063712
Alignment:
Q  74 aatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaa 173  Q
    ||||||| | ||| |||||||| |||||| |||||||| | |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  20063881 aatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaa 20063782  T
Q  174 gtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    ||| |||||||||||||||| ||||||| | || |||||| | ||||||| || ||||||||||||||||    
T  20063781 gtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatgt 20063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 30432591 - 30432418
Alignment:
Q  69 ttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatgga 168  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||  ||||||| ||||||||||||||    
T  30432591 ttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatgga 30432492  T
Q  169 tttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    ||| |||||||||||  ||||||| ||| ||||||||  ||||||  |||||| |  | |||||||||||||||    
T  30432491 tttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 74 - 242
Target Start/End: Original strand, 15588812 - 15588979
Alignment:
Q  74 aatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaa 173  Q
    ||||||| ||| | ||||||||||||||||||| |||||| |||| ||||||| |||| |||| |||||||  ||||||| |||||||||||| |||| |    
T  15588812 aatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttga 15588911  T
Q  174 gtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    || ||||||| ||||||||  ||||||||||||||||||| || |||||| || ||||||||| |||||    
T  15588912 gttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 25539234 - 25539353
Alignment:
Q  120 tcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgattt 219  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| ||||| || ||||||||| |||||    
T  25539234 tcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttaggattt 25539333  T
Q  220 aagttggaattttgacaaca 239  Q
    || | || ||||| ||||||    
T  25539334 aaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 23863324 - 23863452
Alignment:
Q  115 taaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttat 214  Q
    |||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||  |||||||| ||||||||| ||  ||||||     
T  23863324 taaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttag 23863423  T
Q  215 gatttaagttggaattttgacaacaatgt 243  Q
     |||||||| || ||||||||||||||||    
T  23863424 aatttaagtcgggattttgacaacaatgt 23863452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 114 - 241
Target Start/End: Complemental strand, 19491983 - 19491855
Alignment:
Q  114 ataaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaatttta 213  Q
    ||||| |||||||||||||||||||||||| | |||||||| ||||| |||||||||| ||||||| |||||||||||| ||||||||||||  ||||||    
T  19491983 ataaaatcgcaatcaaaatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagatttta 19491885  T
Q  214 t--gatttaagttggaattttgacaacaat 241  Q
    |  ||||||| | |  ||||||||||||||    
T  19491884 taggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 1690785 - 1690892
Alignment:
Q  135 atggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttga 234  Q
    |||| |||||| |||||||||||| |||||||||| | |||||| |||| |||||||| || ||||||||| ||||||| ||||||||| ||| ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  235 caacaatg 242  Q
    ||||||||    
T  1690885 caacaatg 1690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 1690676 - 1690774
Alignment:
Q  60 aaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggatt 158  Q
    |||||||| |||| ||||||| ||||| ||||| |||||||||||||||||||| |||| |||||||||||||| |||| ||| || ||||||||||||    
T  1690676 aaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctattttgggatt 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 16766809 - 16766710
Alignment:
Q  142 ttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaat 241  Q
    ||||||||||| ||||||| |||||||||| | ||||||||| |||| ||||||| |||||||| ||||||| |||||||||   |||||||||||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 5395674 - 5395778
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaa 237  Q
    |||||||| ||||||| |||||| |||||||||| |||| || |||||||| ||| ||||||||||||  ||||||||||||| ||   |||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  238 caatg 242  Q
    |||||    
T  5395774 caatg 5395778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 17995157 - 17995054
Alignment:
Q  139 attttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaac 238  Q
    ||||||| |||||||| ||| | ||| | |||| ||||||||| | |||| ||||||||||||| ||| |||||| | ||||||| |||||||| |||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  239 aatg 242  Q
    ||||    
T  17995057 aatg 17995054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 34841659 - 34841584
Alignment:
Q  138 gattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaatttta 213  Q
    |||||||| | |||||| ||||| |||||||||| ||||||||||| |||| ||| ||||| |||||| |||||||    
T  34841659 gattttgcatgttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 31023325 - 31023259
Alignment:
Q  139 attttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcct 205  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||  |||| ||| ||||||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 15588742 - 15588782
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  15588742 tataagaaattataaaatcgcaatcaaaatcgatggatttt 15588782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 19245232 - 19245152
Alignment:
Q  162 ctatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
    |||||||||| | ||| | |||||||  ||| ||| ||||||||||||||||  |||||||| || |||||||||||||||    
T  19245232 ctatggatttgaatcgctaaagatgagtaaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggattt 142  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  136 tggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgac 235  Q
    |||||||| | |||||||| ||| ||  |||||||| | || ||||||||||| ||| |  ||||||||||||||||| ||||||| |    ||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  236 aacaatg 242  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 7396 - 7585
Alignment:
Q  53 taataccaaatatatcttatgaatggtaaatagttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttatttt 152  Q
    |||||| |||||||| || | | ||||| ||| | |||||| |||| |||||||||||||| |||| ||||||| |||||||||| ||||||| ||||||    
T  7396 taatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaattttgcctatttt 7495  T
Q  153 gggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatg 242  Q
     ||||||||||||||||||   ||||||||| | |||||| ||||||||||||||||||||  |||||||| || ||| | |||||||||    
T  7496 aggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaatg 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 93653 - 93835
Alignment:
Q  60 aaatatatcttatgaatggtaaat-agttataaatgacttagtttataagaaatcataaagtcgcaatcaaaatcgatggattttgcttattttgggatt 158  Q
    |||||||| |||||||| ||| || ||| ||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||| || |||||| | |||    
T  93653 aaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaatt 93752  T
Q  159 ctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaatgt 243  Q
    || |||||||||| ||| ||||| | ||||||||||  |||||| ||| |||||| ||||||||| || ||||||||||||||||    
T  93753 cttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaatgt 93835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt 143  Q
    ||||| ||||| |||| ||||||||||||||||||||||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 91 - 212
Alignment:
Q  103 tataagaaatcataaagtcgcaatcaaaatcgatggatttt-gcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaa 201  Q
    ||||||||||  |||| || ||||||||||||||||||||| || |||||| | ||| |||||||||||| ||||||||||  |||||||| ||||||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  202 tcctgaattttatgatttaagt 223  Q
    ||||| |||||| |||||||||    
T  191 tcctgcattttaggatttaagt 212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  137 ggattttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgaca 236  Q
    ||||||| | ||||||  |||||| |||||||||| ||| ||||||| |||| ||||| ||||||| ||||||||||  |||||||| || |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  237 acaatg 242  Q
    ||||||    
T  37291 acaatg 37296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 48816 - 48918
Alignment:
Q  139 attttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaac 238  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||||| |||| ||| | ||||||| ||  |||||| ||||||||| |||||||| |||||    
T  48816 attttgctt-ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaac 48914  T
Q  239 aatg 242  Q
    ||||    
T  48915 aatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 9049 - 9150
Alignment:
Q  141 tttgcttattttgggattctactatggatttaagtcgttgaagatgaagaaaatcgcaaaatcctgaattttatgatttaagttggaattttgacaacaa 240  Q
    ||||| |||||  ||||| | |||||||||| ||||||||||| |||| |||||| |||||||||  ||||||  |||||| |  | |||||||||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaa 9148  T
Q  241 tg 242  Q
    ||    
T  9149 tg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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