View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2970_high_11 (Length: 304)
Name: NF2970_high_11
Description: NF2970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2970_high_11 |
 | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 11781631 - 11781909
Alignment:
| Q |
11 |
cacagaccgtactaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctc |
110 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
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|
| T |
11781631 |
cacagtccttactaccaaatgcatgtttcgagagtaaagaccaacaatcttcatgagatagaggttctaatgcatgaataggaaatgtgtgtgccacctc |
11781730 |
T |
|
| Q |
111 |
tgcaactttttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattc |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
11781731 |
tgcaactttttgttggcgagttgttataatcaccgaacttccaggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattc |
11781830 |
T |
|
| Q |
211 |
cacaaatcatctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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|
| T |
11781831 |
cacaaatcatctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattat |
11781909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 20 - 289
Target Start/End: Complemental strand, 10517896 - 10517627
Alignment:
| Q |
20 |
tactaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaacttt |
119 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
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|
| T |
10517896 |
tactaccaaatgcatgttttgagagtaaagaccaacaatcttcatgagatagaggttctaattcctgaataggaaatgtgtgtgccacctctgcaacttt |
10517797 |
T |
|
| Q |
120 |
ttgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatca |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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|
| T |
10517796 |
ttgttggcgcgttgttataatcaccgaactcccgggttttccatcattgagtggacttactagttcaagccaatcattgtaatcatcattccacaaatca |
10517697 |
T |
|
| Q |
220 |
tctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10517696 |
tctaacacaaacaaaaatcttttctccctcgagttctttttcaattcaactcgaaggatatcaagattat |
10517627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 28 - 291
Target Start/End: Original strand, 10433710 - 10433973
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||| |||||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
10433710 |
aatgcatgcttcgagagtaaagaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttggc |
10433809 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
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|
| T |
10433810 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10433909 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || ||||| ||||||| ||||||||||||| |
|
|
| T |
10433910 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacacgaaggacatcaagattattg |
10433973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 11769637 - 11769374
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
11769637 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttaattcatgtataggaaatgtgtgtgccacctcagcaacttttcgttggc |
11769538 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||| | ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
11769537 |
gtgttgttataatcaccatgcttccaggttttccattactgaagggacttactagttcaccccaatcattataattgtcattccacatatcatctaacac |
11769438 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||||||||||||||| || || || ||||||||||||||||||||||||||| |
|
|
| T |
11769437 |
aaacaaaaatcttttctccctcaagtttttctttaactcaactcgaaggatatcaagattattg |
11769374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 9839264 - 9839001
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| | ||||||| ||| || ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
9839264 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9839165 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9839164 |
gcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9839065 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||||||||| |||| || || || |||||||||||| ||||||||||||| |
|
|
| T |
9839064 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattg |
9839001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 9850142 - 9849879
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| | ||||||| ||| || ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
9850142 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagatctaatttatgtattggaaatgtgtgtgccacctcagcaactttttgttggc |
9850043 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
9850042 |
gtgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacaaatcatccaacac |
9849943 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||||||||| |||| || || || |||||||||||| ||||||||||||| |
|
|
| T |
9849942 |
aaacaaaaatcttttctcccttgagtttttctttaacgcaactcgaaggacatcaagattattg |
9849879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10527761 - 10527498
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||| | ||| || || ||| |||||||||||| | |||||||| ||||||||| ||||| |
|
|
| T |
10527761 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgataaaagttttagtttatgtataggaaatgtgcgtgccacctcagcaacttttcgttggt |
10527662 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||| |
|
|
| T |
10527661 |
gggttgttataatcaccatacttccaggttttccatcaatgagtggacttactagctcatcccaatcattgtaattgtcattccatagatcatccaacac |
10527562 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||| |||||||| || | || || || | ||||||||||||||||||||||||| |
|
|
| T |
10527561 |
aaacaaaaatctcttctcccttgagattttctttaactgaactcgaaggatatcaagattattg |
10527498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10663929 - 10663671
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| ||||||| |||||| ||||||||| ||| |||||||||||||| |||||||| ||||||||||||| || |
|
|
| T |
10663929 |
aatgcatgctttgaaagtaaggaccaacaatcttcatttgatagaagttctaatttatgtataggaaatgtgtgtgccacctcagcaactttttgttcgc |
10663830 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| |||||| |||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10663829 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttgctagttcactccaatcattataattgtcattccacagatcatcgaacac |
10663730 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | || || || ||||||||||||| |||||||| |
|
|
| T |
10663729 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10663671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10089193 - 10088930
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||| ||||||| || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10089193 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10089094 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10089093 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10088994 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || |||||| |||||| | |||||| |||| |
|
|
| T |
10088993 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattg |
10088930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10196076 - 10195813
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||||| |||||| ||||||| || ||| ||||||||| ||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10196076 |
aatgcatgctttgagagtaaagtccaacaatcttcatttgacagaagttctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10195977 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
10195976 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagtgcaatccaatcattataattgtcattccacagatcatccaacac |
10195877 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||||||| |||| || || || |||||| |||||| | |||||| |||| |
|
|
| T |
10195876 |
aaacaaaaatcttttctccctcgagtttttctttaactcaacttgaaggacaccaagatcattg |
10195813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 21 - 291
Target Start/End: Original strand, 10375504 - 10375774
Alignment:
| Q |
21 |
actaccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttt |
120 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| || |||| ||||||||| |
|
|
| T |
10375504 |
actacccaatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgctaccttagcaactttt |
10375603 |
T |
|
| Q |
121 |
tgttggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcat |
220 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||| |||||||| |||| |||||||||||||||| |
|
|
| T |
10375604 |
cgttggcgcgttgttataatcaccatgcttccgggttttccatcaatgaagggacttactagttcaccccaatcataataattgtcattccacaaatcat |
10375703 |
T |
|
| Q |
221 |
ctaacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
| |||||||||||||||||||||||||| | || || || || |||||||||||| ||||||||||||| |
|
|
| T |
10375704 |
ccaacacaaacaaaaatcttttctcccttgattttttctttaacgcaactcgaaggacatcaagattattg |
10375774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 10261101 - 10260836
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| |||||||| |||||||||||||| | |
|
|
| T |
10261101 |
aatgcatgctttgagagtaaagaccaacagtcttcattcgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaactttttgttgcc |
10261002 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| || || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
10261001 |
gcgttgttataatcaccatgcttccaggttttccatcaacgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacac |
10260902 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattgat |
293 |
Q |
| |
|
|||||||||||||||||||||| || | || || || |||||||||||||| |||||||||||||| |
|
|
| T |
10260901 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggatgtcaagattattgat |
10260836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10077672 - 10077409
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||| ||||||| ||||||| |||| |||||||||| ||| |||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10077672 |
aatgcatgctttgaaagtaaataccaacaatcttcatttgataaaggttctaatatatgtataggaaatgtgcgtgccacctctgcaactttttgttggc |
10077573 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| | ||||||||| ||| |||||||| || ||| ||||||| | |||| |||||||||| |||||||||||| |
|
|
| T |
10077572 |
gtgttgttataatcaccatgcttccatgctttccatcaatgaagggacttacaagttcatcccaatcactataattgtcattccacatatcatctaacac |
10077473 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||| || ||||||||||||| |||||||| |||| |
|
|
| T |
10077472 |
aaacaaaaatcttttatccctcgagtttttttttaactcaactcgaaggacatcaagatcattg |
10077409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 10032406 - 10032148
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||| |||||| ||| || |||||| |||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
10032406 |
aatgcatgctttgagagtaaagaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgcatgccacctcagcaacttttcgttggc |
10032307 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||||||||||||| ||||| |||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||| || || |
|
|
| T |
10032306 |
gtgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagttcaccccaatcattataattgtcattccacagatcatccaaaac |
10032207 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagat |
286 |
Q |
| |
|
|||||||||||||||||||||| || | || || || ||||||||||||| |||||||| |
|
|
| T |
10032206 |
aaacaaaaatcttttctccctcgagattttctttaactcaactcgaaggacatcaagat |
10032148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 30 - 291
Target Start/End: Original strand, 10363466 - 10363727
Alignment:
| Q |
30 |
tgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgc |
129 |
Q |
| |
|
|||||| || |||||||||| |||||| ||||||| |||||| | ||||||| ||| |||||||||||||| |||||||| || ||||||| ||||||| |
|
|
| T |
10363466 |
tgcatgctttgagagtaaagtccaacaatcttcatttgatagaagatctaatttatgtataggaaatgtgtgtgccacctcagctactttttcttggcgc |
10363565 |
T |
|
| Q |
130 |
gttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaa |
229 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| ||| || |||||||| ||| ||||||||| |||| |||||||||| ||| || ||||||| |
|
|
| T |
10363566 |
gttgttataatcaccatgcttccaggttttccatcaatgaaggggcttactagttcaccccaatcattataattgtcattccacagatcgtccaacacaa |
10363665 |
T |
|
| Q |
230 |
acaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||| |||||||||||||| || | || || || ||||||||||||| ||||||||||||| |
|
|
| T |
10363666 |
acaaatatcttttctccctcgagattttctttaactcaactcgaaggacatcaagattattg |
10363727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10184645 - 10184382
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || |||||||| |||||||| ||||||| |||||| ||| || |||||| |||||||||||||| |||||||| || ||||||| ||||| |
|
|
| T |
10184645 |
aatgcatgctttgagagtaacgaccaacaatcttcatttgatagaagttttagttcatgtataggaaatgtgtgtgccacctcagctactttttcttggc |
10184546 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||| |||||| || || |
|
|
| T |
10184545 |
gcgttgttataatcaccatgcttccaggttttccatcaatgaagggacttactagctcatcccaatcatcataactgtcattccacagatcatccaatac |
10184446 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||||||||| | | || || || ||||||||||||| ||||||||||||| |
|
|
| T |
10184445 |
aaacaaaaatcttttctcccttgaatgtttctttaactcaactcgaaggacatcaagattattg |
10184382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 10127331 - 10127068
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || |||||||||||||| ||||||| ||||| || || |||||| |||||||||||| | |||||||| |||||||||||||||| |
|
|
| T |
10127331 |
aatgcatgctttgatagtaaagaccaacaatcttcatctgatagtacttttagttcatgtataggaaatgtgcgtgccacctcagcaactttttgttggc |
10127232 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||| | ||| || ||||| |
|
|
| T |
10127231 |
gcgttgttataatcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccatagatcgtccaacac |
10127132 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||| |||||| || | || || || |||||||||||| ||||||||||||| |
|
|
| T |
10127131 |
aaacaaaaatcttttttccctcgagattttctttaacgcaactcgaaggacatcaagattattg |
10127068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 291
Target Start/End: Complemental strand, 10580992 - 10580741
Alignment:
| Q |
40 |
gagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggcgcgttgttataa |
139 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| | ||| | || ||| |||| |||| || || |||||||||||||||||||||||||| |
|
|
| T |
10580992 |
gagagtaaagaccaacaatcttcatttgatagaggttctaaattatgtacagcaaacatgtgtgccatctttgtaactttttgttggcgcgttgttataa |
10580893 |
T |
|
| Q |
140 |
tcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacacaaacaaaaatct |
239 |
Q |
| |
|
||||| ||||| |||||||||| | ||| ||||||||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
10580892 |
tcaccatgcttccaggttttccattaatgaagggacttactagctcatcccaatcattacaattgtcattccacagatcatccaacacaaacaaaaatct |
10580793 |
T |
|
| Q |
240 |
tttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||| || | || || || ||||| ||||||| ||||||||||||| |
|
|
| T |
10580792 |
tttctcccttgagattttctttaactcaacacgaaggacatcaagattattg |
10580741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 13333307 - 13333044
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13333307 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13333208 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| ||| || | | | |||||| |||||| |||| ||||||||| |||| |||||||||| ||||| ||||| |
|
|
| T |
13333207 |
gtgttgtgatgatcaccctacttccttttttgccgttaatcagtggagttactaactcatcccaatcattataattgtcattccacaggtcatccaacac |
13333108 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||||||||||||||| | ||||||||||||| |
|
|
| T |
13333107 |
taacaaaaatcttttatccctcaagtttttattcaattcaactcgaagaaaatcaagattattg |
13333044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 13171434 - 13171171
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13171434 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13171335 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13171334 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13171235 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||||| |
|
|
| T |
13171234 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattg |
13171171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 13344492 - 13344229
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
13344492 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
13344393 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
13344392 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
13344293 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||||| |
|
|
| T |
13344292 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattg |
13344229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 291
Target Start/End: Complemental strand, 13161386 - 13161120
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
13161386 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13161287 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13161286 |
ggcgtgttgtgatgatcaccctacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13161187 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||| |||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||| |
|
|
| T |
13161186 |
cactaacaaaaatcttttatccctcaagtttttattcaactcaactcgaagagaatcaagattattg |
13161120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 25 - 291
Target Start/End: Complemental strand, 13290071 - 13289805
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
13290071 |
ccaaatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgtt |
13289972 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | |
|
|
| T |
13289971 |
ggcgtgttgtgatgatcaccctacttcctgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccag |
13289872 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||| |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||||||| |
|
|
| T |
13289871 |
caccaacaaaaatcttttatccctcaagttttgattcagttcaactcgaagagaatcaagattattg |
13289805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10500981 - 10500862
Alignment:
| Q |
24 |
accaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgt |
123 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| || |||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
10500981 |
accaaatgcatgcttcgagagtaaagtccaacaatcatcatcagatagaggttctaatttatgaataggaaatgtgcatgcgacctctgcaactttttgt |
10500882 |
T |
|
| Q |
124 |
tggcgcgttgttataatcac |
143 |
Q |
| |
|
| ||| |||||||| ||||| |
|
|
| T |
10500881 |
tcgcgtgttgttattatcac |
10500862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 291
Target Start/End: Original strand, 11130689 - 11130955
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11130689 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11130788 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11130789 |
ggcgtgttgtgacgatgaccctgcttccattgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaa |
11130888 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||| || ||||| | || |||| |||||||||||| | ||||||||||||| |
|
|
| T |
11130889 |
cacaaacaaaaatcttttgtctctcaaagttttcttcagttcaactcgaagaaaatcaagattattg |
11130955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 291
Target Start/End: Original strand, 11148517 - 11148783
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11148517 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11148616 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | || |||| || ||| ||||||||| |||| |||||||| || ||||| || |
|
|
| T |
11148617 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggtgttacaagttcatcccaatcattataattgtcattccataagtcatccaa |
11148716 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||| | ||||| | || |||| |||||||||||| | ||||||||||||| |
|
|
| T |
11148717 |
cacaaacaaaaatcttttggctctcaaagttttcttcagttcaactcgaagaaaatcaagattattg |
11148783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 291
Target Start/End: Original strand, 11159680 - 11159946
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
11159680 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
11159779 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
11159780 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccaaaggtcatccaa |
11159879 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||||||||||||| |
|
|
| T |
11159880 |
cacaaacaaaaatcttttgtcgctcaaagttttctttagttcaactcgaagaaaatcaagattattg |
11159946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 291
Target Start/End: Complemental strand, 8861692 - 8861426
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
8861692 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttatgaataggaaatgtatgtgcaacctctgcaactttttgtt |
8861593 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| | || ||| ||||| ||||||| | | | ||| |||| || ||| ||| ||||| |||| |||||||| | ||||| || |
|
|
| T |
8861592 |
ggcgtgttgtgacgatgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccactcattataattgtcattccataggtcatccaa |
8861493 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||||||||||||| |
|
|
| T |
8861492 |
cacaaacaaaaatcttttgtctctcaatgttttctttagttcaactcgaagaaaatcaagattattg |
8861426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 291
Target Start/End: Complemental strand, 10889712 - 10889446
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||| ||||| | |||||||| ||||||||| | ||||| || ||||||||||||||||| | |
|
|
| T |
10889712 |
ccaaatgcatgctttgagagtaaagaccatgtatcttcattagataaaacttctaatttgtgaataggatacgtgtgtgcaacctctgcaactttttgct |
10889613 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| ||||| || | ||| ||||| ||||||| | | | ||| |||| || ||| ||||||||| |||| |||||||| | ||||| || |
|
|
| T |
10889612 |
ggcgtgttgtgatgacgaccctgcttccactgtttccattaatcaaaggagttacaagttcatcccaatcattataattgtcattccataggtcatccaa |
10889513 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||||||| || ||||| | || || | |||||||||||| | ||| ||||||||| |
|
|
| T |
10889512 |
cacaaacaaaaatcttttgtctctcaaagttttctttagttcaactcgaagaaaatctagattattg |
10889446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 26907300 - 26907037
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
26907300 |
aatgcatgctttgagagtaaagaccaacaatcttcagttgatagaggttctaatttatgtataggaaatgtatgtgccacctctgcaactttttgttggc |
26907201 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||| |||||||| || || ||||||| | |||| || ||||||| ||||| ||||| |
|
|
| T |
26907200 |
gcgttgttataatcaccatgcttccaggttttccatgaatgaagggacttacaagttcttcccaatcactataattgtcgttccacaggtcatccaacac |
26907101 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||||||||||| |||| || | || ||||||||||||| ||||||||||||| |
|
|
| T |
26907100 |
aaacaaaaatcttttctcccttgagtttttccttaactcaactcgaaggacatcaagattattg |
26907037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 28 - 291
Target Start/End: Original strand, 135554 - 135817
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
135554 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
135653 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
135654 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
135753 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||||| |
|
|
| T |
135754 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattg |
135817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 28 - 291
Target Start/End: Original strand, 145605 - 145868
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
145605 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
145704 |
T |
|
| Q |
128 |
gcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaacac |
227 |
Q |
| |
|
| ||||| || |||||| |||||| | ||| || | | | | |||| |||||| |||| ||||||||| ||| ||||||||||| ||| || | ||| |
|
|
| T |
145705 |
gtgttgtgatgatcaccatacttcccgttttgccgttaatcaatggagttactaactcatcccaatcattataactatcattccacagatcgtccagcac |
145804 |
T |
|
| Q |
228 |
aaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||||| |
|
|
| T |
145805 |
taacaaaaatcttttatccctcaagttttgattcaattcaactcgaagaaaatcaagattattg |
145868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 153910 - 154026
Alignment:
| Q |
28 |
aatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttggc |
127 |
Q |
| |
|
|||||||| || || ||||| |||||||| || |||| |||||||| |||| || ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
153910 |
aatgcatgctttgaaagtaacgaccaacagtcatcatctgatagaggatctactttgtgaataggaaacgtgtgtgcaacctccgcaactttttgttggc |
154009 |
T |
|
| Q |
128 |
gcgttgttataatcacc |
144 |
Q |
| |
|
| ||||| || |||||| |
|
|
| T |
154010 |
gtgttgtgatgatcacc |
154026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 11485444 - 11485325
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| | || |||||||||||||| | || |
|
|
| T |
11485444 |
ccaaatgcatgcttcgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaataggaaatgcgcatgcgacctctgcaactttctctt |
11485345 |
T |
|
| Q |
125 |
ggcgcgttgttataatcacc |
144 |
Q |
| |
|
||| |||||||| |||||| |
|
|
| T |
11485344 |
cgcgtgttgttatgatcacc |
11485325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 44957352 - 44957463
Alignment:
| Q |
26 |
caaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgttg |
125 |
Q |
| |
|
|||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||||||| || ||||||||||| ||||||| |
|
|
| T |
44957352 |
caaatgcatgctttgagagtaaagaccaacaatcttcatcagatagaggttctaatttatgaatcggaaatgtgtgtgcaacctctgcaacgttttgttc |
44957451 |
T |
|
| Q |
126 |
gcgcgttgttat |
137 |
Q |
| |
|
|| |||||||| |
|
|
| T |
44957452 |
acgtgttgttat |
44957463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 11485246 - 11485178
Alignment:
| Q |
223 |
aacacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattattg |
291 |
Q |
| |
|
||||||||||||| |||| | ||| |||| | ||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
11485246 |
aacacaaacaaaattcttctatccttcaaatgcttcattaattcaacttgaaggatatcaagattattg |
11485178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 289
Target Start/End: Original strand, 17852586 - 17852850
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || ||||| ||||||||||| ||||||| |||| ||||||||||| |||||| ||||||||| | || ||||| |||||||||| | |
|
|
| T |
17852586 |
ccaaatgcatgctttgagagcaaagaccaacaatcttcatcggatataggttctaatttatgaattggaaatgtgcgtgcaacctccgcaacttttttta |
17852685 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
|||| |||||||| || ||| ||||| | |||||| | | | ||| ||||||||||| ||||||| ||||| |||||||| || || || || |
|
|
| T |
17852686 |
ggcgtgttgttatgatgaccttgcttccagcttttcccttaaacaagggagttactagctcactccaatcaacgtaattgtcattccataagtcgtccaa |
17852785 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||||| | ||| |||| | || | ||||||||||| |||||||||||||||| |
|
|
| T |
17852786 |
cacaaacaaaaatcttctatccatcaattgtttcattaattcaactcggaggatatcaagattat |
17852850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 289
Target Start/End: Original strand, 31679396 - 31679660
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaactttttgtt |
124 |
Q |
| |
|
||||||||||| || |||||||||||||| || || |||| |||||||||||||||| || |||||||| || || | | ||| |||||||||| || |
|
|
| T |
31679396 |
ccaaatgcatgctttgagagtaaagaccagcaatcatcatctgatagaggttctaatttatagataggaaaggtatgggtgaactcggcaactttttatt |
31679495 |
T |
|
| Q |
125 |
ggcgcgttgttataatcaccgaacttccgggttttccatcattgagtggacttactagctcaagccaatcattgtaatcatcattccacaaatcatctaa |
224 |
Q |
| |
|
| || ||||| ||||||||| |||||| | || ||||||| ||| ||| | ||||| | | |||||||||| || ||||||||||| ||||| || |
|
|
| T |
31679496 |
gacgtgttgtgataatcaccctacttccagattctccatcaatgaagggagtgactagatgatgccaatcattatagctatcattccacatgtcatccaa |
31679595 |
T |
|
| Q |
225 |
cacaaacaaaaatcttttctccctcaagttctttttcaattcaactcgaaggatatcaagattat |
289 |
Q |
| |
|
|||||||||||||||||| || ||||||| | || |||| |||||||| | ||||||||||| |
|
|
| T |
31679596 |
cacaaacaaaaatctttttcccttcaagttttgctttaatttgactcgaagaaaatcaagattat |
31679660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 826317 - 826225
Alignment:
| Q |
25 |
ccaaatgcatgtttcgagagtaaagaccaacattcttcatgagatagaggttctaattcatgaataggaaatgtgtgcgccacctctgcaact |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||| | ||| | ||||||||||| |||| |||||||||| | || || || |||||||||||| |
|
|
| T |
826317 |
ccaaatgcatacttggagagtaaagaccaacaatgttcgtccgatagaggttccaatttatgaataggatacgtatgtgcaacctctgcaact |
826225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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