View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2970_low_11 (Length: 313)
Name: NF2970_low_11
Description: NF2970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2970_low_11 |
 | |
|
| [»] chr3 (12 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 17 - 313
Target Start/End: Complemental strand, 26737190 - 26736894
Alignment:
| Q |
17 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26737190 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
26737091 |
T |
|
| Q |
117 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26737090 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaact |
26736991 |
T |
|
| Q |
217 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26736990 |
tctcaaggattcgagggacacgaggttacatggcacctgaatgggttttcaacatgcaaatcacttcaaaagtggatgtttatagctatggagttgt |
26736894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 313
Target Start/End: Complemental strand, 26713954 - 26713658
Alignment:
| Q |
17 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26713954 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
26713855 |
T |
|
| Q |
117 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatt |
216 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
26713854 |
aagccgcaaaacatacttgttgactatgattatcgacctaaggttgcagattttggtttgtctaagctattgaaaaggaatgagcatgataattcaaact |
26713755 |
T |
|
| Q |
217 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26713754 |
tctcaaggattcgagggacacgaggttacatggcacctgaatgggttttcaacatgcaaatcacttcaaaagtggatgtttatagctatggagttgt |
26713658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 313
Target Start/End: Complemental strand, 26698802 - 26698506
Alignment:
| Q |
17 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
116 |
Q |
| |
|
|||||||||||| || || ||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
26698802 |
acttgattggggtaaaaggtataacattgctatgggaactgcaaagggtcttgcttatttacacgaagagtgtttggagtggattttgcattgcgatata |
26698703 |
T |
|
| Q |
117 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatt |
216 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
26698702 |
aagccacaaaacatacttgttgactcggattatcaacctaaggtagcagattttggtttgtctaagctattgaataggaatgaccttgataattcaaatt |
26698603 |
T |
|
| Q |
217 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26698602 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
26698506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 313
Target Start/End: Complemental strand, 26733965 - 26733669
Alignment:
| Q |
17 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
116 |
Q |
| |
|
|||||||||||| || || ||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
26733965 |
acttgattggggtaaaaggtataacattgctatgggaactgcaaagggtcttgcttatttacacgaagagtgtttggagtggattttgcattgcgatata |
26733866 |
T |
|
| Q |
117 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatt |
216 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
26733865 |
aagccacaaaacatacttgttgactcggattatcaacctaaggtagcagattttggtttgtctaagctattgaataggaatgaccttgataattcaaatt |
26733766 |
T |
|
| Q |
217 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26733765 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
26733669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 26751126 - 26750833
Alignment:
| Q |
17 |
acttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatata |
116 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||| ||||||||||| | ||||| |||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26751126 |
acttgattggggtaagaggtataacattgctatgggaactgcaaagggacttgcgtatttacacgaagaatgtttggagtggattttgcattgcgatata |
26751027 |
T |
|
| Q |
117 |
aagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatt |
216 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||| | ||| ||||| || ||||||||| |||| ||||||||||| ||| |||| | |||||||||||||| |
|
|
| T |
26751026 |
aaaccgcaaaacatacttgttgactccgattaccaaccgaaggtagctgattttggtctgtccaagctattgaatagggatgaccttgataattcaaatt |
26750927 |
T |
|
| Q |
217 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
26750926 |
tctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaatcacttctaaagtggacgtttatagctatggagt |
26750833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 42 - 310
Target Start/End: Complemental strand, 26744176 - 26743908
Alignment:
| Q |
42 |
attgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgact |
141 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26744176 |
attgctatgggaactgcaaagggccttgcttatttacacgaagaatgtttggagtggattttgcattgtgatataaagccgcaaaacatacttgttgact |
26744077 |
T |
|
| Q |
142 |
ctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatttctcgaggattcgagggacaagagg |
241 |
Q |
| |
|
||||||| | ||| ||||| || |||||||||||||| |||||||| || ||| | || |||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
26744076 |
ctgattaccaaccgaaggtagcggattttggtttgtccaagctattaaatagggacgactttgatcattcaaaattctcgaggattcgagggacaagagg |
26743977 |
T |
|
| Q |
242 |
ttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagt |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26743976 |
ttacatggcacctgagtgggttttcaacatggaaatcacttcaaaagtggatgtttatagctatggagt |
26743908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 26731801 - 26732098
Alignment:
| Q |
16 |
cacttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatat |
115 |
Q |
| |
|
||||| ||||||| ||||| ||| |||||| | ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
26731801 |
cacttaattggggtaagaggtataaaattgctctcggaactgcaaagtgtcttgcatatttacatgaagaatgtttggagtggattttgcattgtgacat |
26731900 |
T |
|
| Q |
116 |
aaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaat |
215 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| | ||| ||||| || |||||||| ||||||||| || | | ||||| | | ||||||||||| | |
|
|
| T |
26731901 |
aaagccgcaaaacatactaattgactctgattaccaacccaaggtagcggattttgggttgtctaagttactacaaaggaacaatcttgataattcaagt |
26732000 |
T |
|
| Q |
216 |
ttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
||||| ||||| |||| ||||||||||||||||||||||||||| |||||||| ||| ||| ||||| || || ||||||||||||||||||||||| |
|
|
| T |
26732001 |
ttctcaaggatgagaggaacaagaggttacatggcacctgaatggattttcaacttgccaatcacttccaaggtagatgtttatagctatggagttgt |
26732098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 26675591 - 26675294
Alignment:
| Q |
16 |
cacttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatat |
115 |
Q |
| |
|
||||||||||||| ||||| ||| |||||| ||||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
26675591 |
cacttgattggggtaagaggtataacattgctctaggaaccgcaaaggctcttgcatatttacatgaagaatgtttggagtggattttgcattgtgatat |
26675492 |
T |
|
| Q |
116 |
aaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaat |
215 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||| ||||| || | | ||||||||| |||||||||||||| | ||||| | | | ||||||||| | |
|
|
| T |
26675491 |
aaagcctcaaaacatacttattgactctgattaccgacccaaaatagtagattttgggttgtctaagctattacataggaacaatcttaataattcaagt |
26675392 |
T |
|
| Q |
216 |
ttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
||||| ||||| |||| ||||||||||||||||||||||||||| |||||||| ||| ||| ||||| || || ||||||||||| |||||| |||| |
|
|
| T |
26675391 |
ttctcaaggatgagaggaacaagaggttacatggcacctgaatggattttcaacttgccaatcacttccaaggtagatgtttatagttatggaattgt |
26675294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 26690490 - 26690787
Alignment:
| Q |
16 |
cacttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatat |
115 |
Q |
| |
|
||||| ||||||| ||||| ||| |||||| | ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
26690490 |
cacttaattggggtaagaggtataaaattgctctcggaactgcaaagtgtcttgcatatttacatgaagaatgtttggagtggattttgcattgtgacat |
26690589 |
T |
|
| Q |
116 |
aaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaat |
215 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| | ||| ||||| || |||||||| ||||||||| || | | ||||| | | ||||||||||| | |
|
|
| T |
26690590 |
aaagccgcaaaacatactaattgactccaattaccaacccaaggtagcggattttgggttgtctaagttactacaaaggaacaatcttgataattcaagt |
26690689 |
T |
|
| Q |
216 |
ttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
||||| ||||| |||| ||||||||||||||||||||||||||| |||||||| ||| ||| ||||| || || ||||||||||||||||||||||| |
|
|
| T |
26690690 |
ttctcaaggatgagaggaacaagaggttacatggcacctgaatggattttcaacttgccaatcacttccaaggtagatgtttatagctatggagttgt |
26690787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 42 - 313
Target Start/End: Original strand, 26694677 - 26694948
Alignment:
| Q |
42 |
attgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgact |
141 |
Q |
| |
|
|||||| | ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
26694677 |
attgctctcggaactgcaaagtgtcttgcctatttacatgaagaatgtttggagtggattttgcattgtgacataaagccgcaaaacatactaattgact |
26694776 |
T |
|
| Q |
142 |
ctgattatcgacctaaggttgcagattttggtttgtctaagctattgaacaggaatgagcatgataattcaaatttctcgaggattcgagggacaagagg |
241 |
Q |
| |
|
| |||| | ||| ||||| || |||||||| ||||||||| || | | ||||| | ||||||||||| |||||| ||||| |||| |||||||| |
|
|
| T |
26694777 |
ccaattaccaacccaaggtagcggattttgggttgtctaagttagtacaaaggaacaattttgataattcaagtttctcaaggatgagaggaacaagagg |
26694876 |
T |
|
| Q |
242 |
ttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatggagttgt |
313 |
Q |
| |
|
|||||||| |||||||||| |||||||| ||| ||| ||||| || || ||||||||||||||||||||||| |
|
|
| T |
26694877 |
ttacatgggacctgaatggattttcaacttgccaatcacttccaaggtagatgtttatagctatggagttgt |
26694948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 47212361 - 47212204
Alignment:
| Q |
21 |
gattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagc |
120 |
Q |
| |
|
||||||||||| |||| || || ||| |||| ||||||||| || | |||||| | |||||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
47212361 |
gattggggaaaaagatttgacatagctttaggcactgcaaaaggtttggcttatatccatgaagagtgtttggagtggattttgcattgtgatgtgaagc |
47212262 |
T |
|
| Q |
121 |
cgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtc |
178 |
Q |
| |
|
| |||||||| ||| | || ||| |||||| ||| ||| || |||||||||||||||| |
|
|
| T |
47212261 |
cacaaaacattcttttggattctaattatcaaccaaagatttcagattttggtttgtc |
47212204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 307
Target Start/End: Original strand, 47193580 - 47193818
Alignment:
| Q |
69 |
gcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagatt |
168 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||| ||||| ||| | || || ||||| || | ||||| | ||| || ||| |||||||| |||| |
|
|
| T |
47193580 |
gcttatttacatgaagagtgtttggaatgggttttacattgtgatgtgaaacctcaaaatattttacttgacacaaattttcaaccaaaggttgctgatt |
47193679 |
T |
|
| Q |
169 |
ttggtttgtctaagctattgaacaggaatgagcatgataattcaaatttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaa |
268 |
Q |
| |
|
||||||| || || |||||||| || |||| | ||||| ||| ||| || || || |||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
47193680 |
ttggtttatcaaaactattgaatagagatgaacgtgatagttctgctttttcaagaataagagggacaagaggttatatggcacctgaatgggtttataa |
47193779 |
T |
|
| Q |
269 |
catgcaaattacttcaaaagtggatgtttatagctatgg |
307 |
Q |
| |
|
| | |||||||||||||| ||||||||||| ||||| |
|
|
| T |
47193780 |
tcttcgtattacttcaaaagttgatgtttatagttatgg |
47193818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 21123426 - 21123258
Alignment:
| Q |
16 |
cacttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatat |
115 |
Q |
| |
|
||||||||||| | || || |||| ||||||| ||||||| || | | |||||||||| |||||||||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
21123426 |
cacttgattggagtaaaaggtatgatattgctttaggaacagctagagttcttgcttatctacatgaagaatgtatggagtggattttgcattgtgatat |
21123327 |
T |
|
| Q |
116 |
aaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagct |
184 |
Q |
| |
|
|||||| ||||| |||||| |||| ||| | | || ||| ||| | ||||||||||| ||||||||||| |
|
|
| T |
21123326 |
aaagcctcaaaatatacttcttgattctaactttcaacccaagttagcagattttggattgtctaagct |
21123258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 18658696 - 18658548
Alignment:
| Q |
36 |
tatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttg |
135 |
Q |
| |
|
|||| ||||||| ||||||| || ||| ||| |||||| |||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
18658696 |
tatgatattgctttaggaacagctaaagttctagcttatctacatgaagaatgtttggaatggattttgcattgtgatataaagcctcaaaacatacttc |
18658597 |
T |
|
| Q |
136 |
ttgactctgattatcgacctaaggttgcagattttggtttgtctaagct |
184 |
Q |
| |
|
|||| ||| | | || |||||| | ||||||||||| || |||||||| |
|
|
| T |
18658596 |
ttgattctaactttcaccctaagttagcagattttggattatctaagct |
18658548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 308
Target Start/End: Original strand, 21108331 - 21108563
Alignment:
| Q |
76 |
tacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggttt |
175 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||| | | | || ||| | || |||||||| || |
|
|
| T |
21108331 |
tacatgaagaatgtttggagtggattttgcattgtgatataaagccacaaaacatacttcttgattctaacttccagcccaagttagccgattttggatt |
21108430 |
T |
|
| Q |
176 |
gtctaagctattgaacaggaatgagcatgataattcaaatttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaa |
275 |
Q |
| |
|
||| ||||| |||||||| | | | |||||||| |||| | |||| |||| |||||||| || ||||||||||||||| ||||||| ||| | |
|
|
| T |
21108431 |
gtcaaagctgcaaaacaggaacaaccttaataattcatgcatctcaatgattagaggaacaagagggtatatggcacctgaatggattttcaatttgcca |
21108530 |
T |
|
| Q |
276 |
attacttcaaaagtggatgtttatagctatgga |
308 |
Q |
| |
|
|| || || || |||||||||||||| |||||| |
|
|
| T |
21108531 |
ataacatctaaggtggatgtttatagttatgga |
21108563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 29213123 - 29212966
Alignment:
| Q |
21 |
gattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagc |
120 |
Q |
| |
|
|||||| |||| |||| ||| || ||| |||| ||||||||| || | |||||| | ||||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
29213123 |
gattggagaaaaagatttggcatggctttaggtactgcaaaaggtttggcttatatttatgaagagtgtttggagtggattttgcattgtgatgtgaagc |
29213024 |
T |
|
| Q |
121 |
cgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtc |
178 |
Q |
| |
|
| |||||||| ||| | || ||| |||||| | | || ||| || ||||||||||||| |
|
|
| T |
29213023 |
cacaaaacattcttttggattctaattatcaatcaaaagtttcaaattttggtttgtc |
29212966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 21111594 - 21111426
Alignment:
| Q |
16 |
cacttgattggggaaagagatatggtattgctataggaactgcaaaatgtcttgcttatttacatgaagagtgtttggagtggattttgcattgcgatat |
115 |
Q |
| |
|
||||||||||| | || || |||| ||||||| ||||||| || | | |||||||||| |||||||||| ||| | || ||||| |||||||| ||||| |
|
|
| T |
21111594 |
cacttgattggagtaaaaggtatgatattgctttaggaacagctagagttcttgcttatctacatgaagaatgtctcgaatggatattgcattgtgatat |
21111495 |
T |
|
| Q |
116 |
aaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggtttgtctaagct |
184 |
Q |
| |
|
|||||| ||||| |||||| |||| ||| | | || || ||| | ||||||||||| ||||||||||| |
|
|
| T |
21111494 |
aaagcctcaaaatatacttcttgattctaactttcagcccaagttagcagattttggattgtctaagct |
21111426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 21130494 - 21130385
Alignment:
| Q |
76 |
tacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagattttggttt |
175 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |||||| |||| ||| | | || || ||| | || |||||||| || |
|
|
| T |
21130494 |
tacatgaagaatgtttggaatggattttgcattgtgatataaagcctcaaaatatacttcttgattctaactttcagcccaagttagccgattttggatt |
21130395 |
T |
|
| Q |
176 |
gtctaagcta |
185 |
Q |
| |
|
|||||||||| |
|
|
| T |
21130394 |
gtctaagcta |
21130385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 21098712 - 21098775
Alignment:
| Q |
76 |
tacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttga |
139 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
21098712 |
tacatgaagaatgtttggaatggattttacattgtgatataaagccgcaaaatatacttcttga |
21098775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 18658524 - 18658416
Alignment:
| Q |
205 |
ataattcaaatttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagcta |
304 |
Q |
| |
|
|||||||| | ||||| | |||| |||| |||||||| || ||||| ||||| ||| ||||||| ||| ||| || || ||||||||||||||| | || |
|
|
| T |
18658524 |
ataattcagaattctcaatgattagaggaacaagaggatatatggcccctgagtggattttcaatttgccaataacatctaaagtggatgtttatggtta |
18658425 |
T |
|
| Q |
305 |
tggagttgt |
313 |
Q |
| |
|
||| ||||| |
|
|
| T |
18658424 |
tggggttgt |
18658416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 21098860 - 21098944
Alignment:
| Q |
224 |
gattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagctatgga |
308 |
Q |
| |
|
|||| |||| |||||||| || ||||| || |||||| ||||||| ||| ||| || || ||||| |||||||||||||||||| |
|
|
| T |
21098860 |
gattagaggaacaagagggtatatggccccagaatggattttcaatttgccaataacatctaaagtagatgtttatagctatgga |
21098944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 21123234 - 21123126
Alignment:
| Q |
205 |
ataattcaaatttctcgaggattcgagggacaagaggttacatggcacctgaatgggttttcaacatgcaaattacttcaaaagtggatgtttatagcta |
304 |
Q |
| |
|
|||||||| | ||||| | |||| |||| |||||||| || ||||| ||||||||| ||| ||| | | ||| || || ||||||||||||||||| || |
|
|
| T |
21123234 |
ataattcagaattctcaatgattagaggaacaagaggatatatggcccctgaatggatttccaatttaccaataacatctaaagtggatgtttatagtta |
21123135 |
T |
|
| Q |
305 |
tggagttgt |
313 |
Q |
| |
|
||| ||||| |
|
|
| T |
21123134 |
tggggttgt |
21123126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 307
Target Start/End: Original strand, 39132235 - 39132476
Alignment:
| Q |
69 |
gcttatttacatgaagagtgtttggagtggattttgcattgcgatataaagccgcaaaacatacttgttgactctgattatcgacctaaggttgcagatt |
168 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||| ||||| ||||||||||| ||||| |||||| |||| ||| | |||| ||| ||| | ||||| | |
|
|
| T |
39132235 |
gcttatctacatgaagaatgtttggagtggattttacattgtgatataaagcctcaaaatatacttcttgattctaactatcaacccaagttagcagact |
39132334 |
T |
|
| Q |
169 |
ttggtttgtctaagctattgaacaggaa---tgagcatgataattcaaatttctcgaggattcgagggacaagaggttacatggcacctgaatgggtttt |
265 |
Q |
| |
|
|||| ||||||||||| || || || || || ||||||| | ||||| | |||| |||| |||||||| || ||||| |||||||||||||| |
|
|
| T |
39132335 |
ttggattgtctaagctgagaaatagaaacaatgtcaatagtaattcagaattctcaatgattagaggaacaagaggatatatggctcctgaatgggtttt |
39132434 |
T |
|
| Q |
266 |
caacatgcaaattacttcaaaagtggatgtttatagctatgg |
307 |
Q |
| |
|
||| | | ||| || || ||||||||||||||||| ||||| |
|
|
| T |
39132435 |
caatttaccaataacatctaaagtggatgtttatagttatgg |
39132476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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