View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2970_low_23 (Length: 250)
Name: NF2970_low_23
Description: NF2970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2970_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 7621993 - 7622173
Alignment:
| Q |
11 |
cagagatcatcaatcttaatactactattatttatccttagcctcgagttgtcatat--gtagccacgccttcatgtgtcatgatttgatgttgtatcta |
108 |
Q |
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| T |
7621993 |
cagaaatcatcaatcttaatactactattatttatccttagcctcgagttgtcatatatgtagccacgccttcatgtgtcatgatttggtgttgtatcta |
7622092 |
T |
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| Q |
109 |
tacattcttataatgatgtttgggaaggatccatatttcatgcagtcaaaaccacatctagttttatgctttggatatgta |
189 |
Q |
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| T |
7622093 |
tacattcttataatgatgtttgggaaggatccatatttcatgcagtcaaaaccacatctagttttatgctttggatatgta |
7622173 |
T |
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