View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2974_high_3 (Length: 460)
Name: NF2974_high_3
Description: NF2974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2974_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 11 - 445
Target Start/End: Complemental strand, 41705837 - 41705403
Alignment:
| Q |
11 |
cataggcgaacgttgggattggctcttcaattaccgatagtgcaacaattacaatggtttagttttcaagcattttgtatattttaataagtaatttatc |
110 |
Q |
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| T |
41705837 |
cataggcgaacgttgggattggctattcaattaccgatagtgcaacaattacaatggtctagttttcaagcattttgtatattttaataagtaatttatc |
41705738 |
T |
|
| Q |
111 |
cactatgatatgctctttatatatatgtgctacttgacttaaatgaaaggaagaaaaactctgcaaagtttagcaagttccaaagtcgtttctctttgca |
210 |
Q |
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| T |
41705737 |
cactatgatatgctctttatatatatgtgctacttgacttaaatgaaaggaagaaaaactctgcaaagtttagcaagttccaaagtcgtttctctttgca |
41705638 |
T |
|
| Q |
211 |
tcttacaaaagagagtatatttataaaagccatttataggaacatatacatctagtatcaattggtcccatagatctttatatttttatggtattccata |
310 |
Q |
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| T |
41705637 |
tcttacaaaagagcgtatatttataaaagccatttataggaacatatacatctagtatcaattggtcccatagatctttatatttttatggtattccata |
41705538 |
T |
|
| Q |
311 |
ttgtagattcttggagccactttattccatttcagtagctatgcatagcctttttatttctttgattgcattcatatcaatgcataacagttttcttctc |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41705537 |
ttgtagattcttggagccactttattccatttcagtagctatgcatagcctttttatttctttgattgcattcatatcaatgcataacagttttcttctc |
41705438 |
T |
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| Q |
411 |
ttaattatccatgcaaaatgattattgaatcaact |
445 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
41705437 |
ttaattatccatgcaaaatgattattgaatcaact |
41705403 |
T |
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