View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2974_low_17 (Length: 225)
Name: NF2974_low_17
Description: NF2974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2974_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 38480825 - 38481045
Alignment:
| Q |
1 |
caagaattttgacttaaaagcatgctatttatggaaagaatacgcttaacgacaagnnnnnnnnggtcgtagcctagttctctctaaaatatagtatata |
100 |
Q |
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| T |
38480825 |
caagaatcttgacttaaaagcatgctatttatggaaagaatacgcttaacgacaagaaaaaaaaagtcgtagcctagttctctctaaaatatagtatata |
38480924 |
T |
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| Q |
101 |
gtatgaaataatgaaaaactcttgattagaatccaacattcaagtccaccaattccattttccttgattttatgtaaaattatgtaccaaacccaaacca |
200 |
Q |
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| T |
38480925 |
gtatgaaataatgaaaaactcttgactagaatccaacattcaagtccaccaattcaattttccttgattttatgtaaaattatgtaccaaacccaaacca |
38481024 |
T |
|
| Q |
201 |
ccacagaatgaaggagattgt |
221 |
Q |
| |
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||||||||| ||||||||||| |
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| T |
38481025 |
ccacagaatcaaggagattgt |
38481045 |
T |
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