View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2975_high_17 (Length: 290)

Name: NF2975_high_17
Description: NF2975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2975_high_17
NF2975_high_17
[»] chr3 (67 HSPs)
chr3 (16-256)||(26268703-26268944)
chr3 (75-252)||(15772003-15772179)
chr3 (28-256)||(54268980-54269206)
chr3 (102-253)||(19601555-19601706)
chr3 (97-253)||(31991068-31991224)
chr3 (97-253)||(33476327-33476483)
chr3 (28-253)||(41927975-41928199)
chr3 (28-253)||(44555851-44556074)
chr3 (102-256)||(32147002-32147156)
chr3 (103-253)||(33475476-33475626)
chr3 (28-253)||(8576040-8576264)
chr3 (102-256)||(27492319-27492474)
chr3 (75-227)||(45419948-45420098)
chr3 (33-253)||(52701100-52701318)
chr3 (133-256)||(23883525-23883647)
chr3 (133-256)||(23917366-23917488)
chr3 (102-256)||(37178947-37179101)
chr3 (102-256)||(53397101-53397255)
chr3 (155-256)||(21749626-21749726)
chr3 (156-256)||(11045465-11045564)
chr3 (102-256)||(19669705-19669860)
chr3 (102-212)||(32943006-32943117)
chr3 (102-227)||(25250022-25250148)
chr3 (140-242)||(45387457-45387558)
chr3 (133-256)||(29348311-29348433)
chr3 (102-250)||(38173908-38174056)
chr3 (98-256)||(39562684-39562843)
chr3 (102-221)||(53517953-53518073)
chr3 (139-253)||(25232699-25232813)
chr3 (139-237)||(44556784-44556882)
chr3 (98-250)||(46295053-46295206)
chr3 (140-256)||(44808975-44809090)
chr3 (102-256)||(40762735-40762889)
chr3 (70-192)||(41927246-41927367)
chr3 (133-221)||(34995569-34995657)
chr3 (199-253)||(28260412-28260466)
chr3 (102-195)||(45235541-45235635)
chr3 (110-252)||(46529623-46529766)
chr3 (191-256)||(43127673-43127738)
chr3 (200-256)||(9018125-9018180)
chr3 (187-251)||(36253314-36253378)
chr3 (191-251)||(55006143-55006203)
chr3 (102-192)||(3173707-3173798)
chr3 (115-250)||(28685326-28685455)
chr3 (140-191)||(44557765-44557816)
chr3 (174-245)||(44665122-44665193)
chr3 (21-191)||(53439251-53439420)
chr3 (200-250)||(117588-117637)
chr3 (184-250)||(23251656-23251722)
chr3 (186-256)||(30778739-30778809)
chr3 (200-250)||(44557720-44557769)
chr3 (200-250)||(50615225-50615274)
chr3 (191-256)||(869495-869560)
chr3 (191-256)||(3078423-3078488)
chr3 (191-256)||(10182218-10182283)
chr3 (185-256)||(20044030-20044103)
chr3 (191-256)||(23878650-23878715)
chr3 (191-256)||(28055244-28055309)
chr3 (191-256)||(28065669-28065734)
chr3 (191-256)||(31269636-31269701)
chr3 (191-256)||(36777918-36777983)
chr3 (191-256)||(45454386-45454451)
chr3 (191-256)||(50362442-50362507)
chr3 (191-256)||(53328564-53328629)
chr3 (191-251)||(40126876-40126936)
chr3 (209-253)||(41927371-41927415)
chr3 (191-251)||(53947613-53947673)
[»] chr5 (62 HSPs)
chr5 (70-250)||(22167016-22167195)
chr5 (75-256)||(18261309-18261491)
chr5 (70-253)||(43210764-43210946)
chr5 (33-253)||(2262931-2263147)
chr5 (75-256)||(10463717-10463897)
chr5 (102-250)||(13920069-13920217)
chr5 (97-253)||(19332462-19332618)
chr5 (78-256)||(8313192-8313369)
chr5 (102-251)||(24637079-24637228)
chr5 (28-240)||(8218149-8218360)
chr5 (155-256)||(37103092-37103192)
chr5 (98-282)||(30698790-30698974)
chr5 (102-256)||(41139031-41139185)
chr5 (75-249)||(10674621-10674794)
chr5 (103-253)||(40272464-40272614)
chr5 (103-239)||(16965878-16966014)
chr5 (102-256)||(27335636-27335790)
chr5 (102-256)||(42877746-42877899)
chr5 (102-240)||(43441011-43441149)
chr5 (75-251)||(8336823-8336998)
chr5 (97-253)||(28616165-28616320)
chr5 (102-256)||(2003958-2004112)
chr5 (102-256)||(27307825-27307979)
chr5 (103-237)||(43209900-43210034)
chr5 (160-256)||(1683300-1683395)
chr5 (160-228)||(14049896-14049963)
chr5 (98-256)||(30394082-30394241)
chr5 (102-220)||(22023237-22023356)
chr5 (160-251)||(31211253-31211343)
chr5 (103-253)||(40158272-40158422)
chr5 (146-256)||(17742376-17742485)
chr5 (157-253)||(9168689-9168786)
chr5 (155-256)||(34785385-34785485)
chr5 (98-256)||(2005025-2005184)
chr5 (182-256)||(30734057-30734131)
chr5 (103-251)||(3548485-3548633)
chr5 (133-256)||(621761-621883)
chr5 (162-253)||(32537537-32537627)
chr5 (165-256)||(34009992-34010082)
chr5 (102-227)||(4462111-4462239)
chr5 (140-256)||(8404530-8404645)
chr5 (75-178)||(9687715-9687818)
chr5 (21-197)||(42645087-42645259)
chr5 (172-226)||(41193140-41193194)
chr5 (186-250)||(38693607-38693670)
chr5 (160-219)||(9924324-9924383)
chr5 (102-180)||(26865890-26865969)
chr5 (70-177)||(37812646-37812752)
chr5 (186-256)||(18740732-18740802)
chr5 (200-250)||(34527122-34527171)
chr5 (190-251)||(42209370-42209432)
chr5 (186-251)||(4291739-4291804)
chr5 (191-256)||(6450129-6450194)
chr5 (191-256)||(7573031-7573096)
chr5 (191-256)||(8315612-8315677)
chr5 (191-256)||(27189058-27189123)
chr5 (191-256)||(27432507-27432572)
chr5 (191-256)||(42992479-42992544)
chr5 (191-251)||(4123186-4123246)
chr5 (199-251)||(23425363-23425415)
chr5 (21-61)||(32510484-32510524)
chr5 (200-256)||(42852828-42852883)
[»] chr1 (71 HSPs)
chr1 (75-256)||(7565314-7565494)
chr1 (97-256)||(31024191-31024350)
chr1 (70-253)||(12251506-12251688)
chr1 (28-253)||(11396966-11397189)
chr1 (97-253)||(49767687-49767843)
chr1 (70-253)||(27550768-27550950)
chr1 (103-256)||(33707505-33707658)
chr1 (102-256)||(36368025-36368179)
chr1 (78-253)||(49768546-49768720)
chr1 (102-251)||(52493534-52493683)
chr1 (102-256)||(30982517-30982671)
chr1 (102-256)||(30719485-30719640)
chr1 (77-237)||(42971933-42972091)
chr1 (28-256)||(26805627-26805853)
chr1 (140-256)||(33709080-33709195)
chr1 (116-256)||(47008781-47008920)
chr1 (102-256)||(13501212-13501366)
chr1 (102-256)||(31400225-31400380)
chr1 (102-256)||(46596911-46597064)
chr1 (102-256)||(11999724-11999878)
chr1 (70-253)||(12897229-12897410)
chr1 (102-256)||(19791245-19791399)
chr1 (102-256)||(26020534-26020688)
chr1 (102-227)||(51561510-51561636)
chr1 (97-253)||(25351957-25352111)
chr1 (168-251)||(23176061-23176144)
chr1 (147-250)||(35530838-35530940)
chr1 (160-256)||(28701020-28701115)
chr1 (146-250)||(45127839-45127942)
chr1 (185-256)||(39681883-39681953)
chr1 (97-238)||(1297017-1297157)
chr1 (187-256)||(5430698-5430767)
chr1 (103-252)||(6216517-6216668)
chr1 (28-201)||(48218040-48218211)
chr1 (140-253)||(52881633-52881745)
chr1 (187-251)||(37710898-37710962)
chr1 (201-253)||(48410250-48410302)
chr1 (102-256)||(10041375-10041529)
chr1 (102-251)||(21091057-21091205)
chr1 (102-195)||(21794416-21794510)
chr1 (103-256)||(48468275-48468428)
chr1 (191-256)||(17964103-17964168)
chr1 (191-256)||(31861666-31861731)
chr1 (191-256)||(36796024-36796089)
chr1 (191-251)||(26507598-26507658)
chr1 (196-281)||(29972572-29972657)
chr1 (173-252)||(35188250-35188330)
chr1 (198-254)||(40990422-40990478)
chr1 (102-180)||(15053646-15053725)
chr1 (200-250)||(15053732-15053781)
chr1 (191-245)||(31267017-31267071)
chr1 (70-172)||(51841222-51841323)
chr1 (191-256)||(4647173-4647238)
chr1 (191-256)||(10371626-10371691)
chr1 (194-251)||(10895735-10895792)
chr1 (75-180)||(13083424-13083528)
chr1 (191-256)||(14007034-14007099)
chr1 (191-256)||(34076101-34076166)
chr1 (186-251)||(43030289-43030354)
chr1 (186-251)||(45194455-45194520)
chr1 (191-256)||(47632696-47632761)
chr1 (191-256)||(48624307-48624372)
chr1 (191-256)||(48723516-48723581)
chr1 (162-250)||(52009931-52010017)
chr1 (191-251)||(4008857-4008917)
chr1 (21-57)||(12896872-12896908)
chr1 (191-251)||(14743988-14744048)
chr1 (191-251)||(26451172-26451232)
chr1 (97-181)||(27551705-27551789)
chr1 (140-180)||(37986904-37986944)
chr1 (75-196)||(48410100-48410218)
[»] chr6 (40 HSPs)
chr6 (28-253)||(288932-289155)
chr6 (78-253)||(289496-289671)
chr6 (70-253)||(3914560-3914741)
chr6 (70-253)||(21108205-21108387)
chr6 (70-256)||(3375265-3375450)
chr6 (75-256)||(5079642-5079822)
chr6 (155-252)||(17467622-17467719)
chr6 (133-227)||(1821019-1821113)
chr6 (75-256)||(15721200-15721380)
chr6 (115-216)||(844126-844227)
chr6 (75-256)||(26356508-26356691)
chr6 (120-256)||(861493-861629)
chr6 (102-253)||(938850-939001)
chr6 (153-256)||(22732134-22732236)
chr6 (102-256)||(29692046-29692200)
chr6 (133-256)||(33518491-33518613)
chr6 (103-250)||(5974450-5974597)
chr6 (103-250)||(8709843-8709989)
chr6 (98-256)||(33744797-33744956)
chr6 (102-256)||(2087444-2087597)
chr6 (103-256)||(30660785-30660938)
chr6 (160-256)||(20510544-20510639)
chr6 (103-256)||(28476326-28476479)
chr6 (134-256)||(5087325-5087446)
chr6 (75-256)||(10915281-10915463)
chr6 (160-227)||(14256307-14256374)
chr6 (133-256)||(17697521-17697643)
chr6 (155-250)||(30492770-30492863)
chr6 (102-227)||(20898143-20898269)
chr6 (191-251)||(15053896-15053956)
chr6 (160-235)||(30916860-30916935)
chr6 (200-250)||(18503133-18503182)
chr6 (186-256)||(20510063-20510133)
chr6 (191-256)||(12783483-12783548)
chr6 (191-256)||(13400266-13400331)
chr6 (191-256)||(16270277-16270342)
chr6 (191-256)||(19693195-19693260)
chr6 (191-256)||(33971458-33971523)
chr6 (187-251)||(8235315-8235379)
chr6 (140-180)||(18503189-18503229)
[»] chr8 (73 HSPs)
chr8 (28-253)||(32243611-32243834)
chr8 (102-256)||(21135327-21135481)
chr8 (97-253)||(3865692-3865848)
chr8 (102-256)||(24451488-24451642)
chr8 (70-250)||(6243447-6243625)
chr8 (133-256)||(18840051-18840173)
chr8 (103-253)||(32244535-32244685)
chr8 (103-256)||(37706856-37707009)
chr8 (102-253)||(43622929-43623081)
chr8 (28-233)||(44894568-44894771)
chr8 (102-248)||(8784582-8784728)
chr8 (102-256)||(17498627-17498781)
chr8 (102-256)||(35369194-35369348)
chr8 (106-256)||(42499513-42499663)
chr8 (75-256)||(25102095-25102275)
chr8 (102-240)||(36063572-36063712)
chr8 (79-253)||(42024387-42024559)
chr8 (70-250)||(9252620-9252799)
chr8 (106-253)||(10409789-10409938)
chr8 (102-250)||(35863045-35863193)
chr8 (103-227)||(44265453-44265578)
chr8 (18-256)||(30658572-30658806)
chr8 (102-256)||(38706576-38706730)
chr8 (102-215)||(6590269-6590383)
chr8 (102-250)||(13323690-13323839)
chr8 (146-256)||(41281435-41281544)
chr8 (73-256)||(6413403-6413585)
chr8 (160-256)||(18304801-18304896)
chr8 (155-255)||(27875581-27875680)
chr8 (155-255)||(28015762-28015861)
chr8 (76-245)||(2821135-2821296)
chr8 (102-256)||(17842469-17842622)
chr8 (133-256)||(33322569-33322691)
chr8 (160-250)||(32514184-32514274)
chr8 (97-283)||(27000778-27000963)
chr8 (75-251)||(43988293-43988466)
chr8 (70-253)||(3866529-3866712)
chr8 (98-256)||(28755308-28755467)
chr8 (102-249)||(36470965-36471112)
chr8 (162-250)||(37967600-37967687)
chr8 (201-256)||(5765849-5765904)
chr8 (98-250)||(36018111-36018265)
chr8 (160-238)||(36909754-36909832)
chr8 (139-221)||(41590505-41590587)
chr8 (102-218)||(5250561-5250678)
chr8 (168-256)||(16473054-16473140)
chr8 (168-256)||(16477625-16477711)
chr8 (190-249)||(28701810-28701869)
chr8 (133-240)||(28694981-28695092)
chr8 (147-216)||(30968713-30968782)
chr8 (191-251)||(41315497-41315557)
chr8 (102-212)||(5696088-5696199)
chr8 (102-195)||(14121938-14122032)
chr8 (103-256)||(35209600-35209753)
chr8 (160-252)||(6018102-6018193)
chr8 (185-253)||(6244310-6244378)
chr8 (188-256)||(42219364-42219432)
chr8 (133-227)||(17062526-17062619)
chr8 (133-227)||(17585739-17585832)
chr8 (191-256)||(7419820-7419885)
chr8 (191-256)||(7637095-7637160)
chr8 (191-256)||(12616471-12616536)
chr8 (191-256)||(13699497-13699562)
chr8 (191-256)||(24541894-24541959)
chr8 (191-256)||(28174290-28174355)
chr8 (191-256)||(36051911-36051976)
chr8 (191-256)||(39106908-39106973)
chr8 (191-256)||(42175247-42175312)
chr8 (191-256)||(44090533-44090598)
chr8 (139-215)||(2826923-2826999)
chr8 (191-251)||(30378182-30378242)
chr8 (21-61)||(32513962-32514002)
chr8 (200-248)||(39337083-39337130)
[»] chr7 (68 HSPs)
chr7 (70-253)||(1066541-1066723)
chr7 (97-240)||(16080918-16081061)
chr7 (75-249)||(12621715-12621888)
chr7 (28-253)||(37107613-37107836)
chr7 (70-253)||(1065666-1065848)
chr7 (102-244)||(44080964-44081106)
chr7 (75-256)||(47791818-47791998)
chr7 (73-250)||(41571444-41571619)
chr7 (102-250)||(43597625-43597773)
chr7 (75-250)||(35482197-35482371)
chr7 (70-233)||(8081782-8081944)
chr7 (70-253)||(37108537-37108718)
chr7 (159-256)||(37539848-37539945)
chr7 (78-252)||(1260123-1260296)
chr7 (147-256)||(10620655-10620764)
chr7 (140-256)||(28924540-28924653)
chr7 (133-251)||(14990686-14990803)
chr7 (133-251)||(15420297-15420414)
chr7 (146-256)||(27727363-27727473)
chr7 (73-238)||(9633322-9633485)
chr7 (102-253)||(43574245-43574397)
chr7 (102-253)||(6588693-6588844)
chr7 (102-256)||(21109481-21109636)
chr7 (102-240)||(44167932-44168068)
chr7 (140-256)||(46330844-46330959)
chr7 (102-227)||(15652955-15653081)
chr7 (163-256)||(1961965-1962057)
chr7 (103-227)||(4883776-4883901)
chr7 (70-253)||(8832683-8832866)
chr7 (160-256)||(22378593-22378688)
chr7 (105-253)||(42974246-42974394)
chr7 (146-238)||(45958811-45958902)
chr7 (102-212)||(18059012-18059123)
chr7 (155-256)||(38159013-38159112)
chr7 (75-227)||(7238739-7238891)
chr7 (103-250)||(46044432-46044580)
chr7 (70-256)||(11397094-11397278)
chr7 (75-248)||(4926352-4926527)
chr7 (188-251)||(6972353-6972416)
chr7 (201-256)||(38599073-38599128)
chr7 (165-256)||(36019897-36019988)
chr7 (28-181)||(38593208-38593359)
chr7 (153-245)||(41327493-41327585)
chr7 (187-253)||(38594604-38594670)
chr7 (21-151)||(18798867-18798995)
chr7 (173-250)||(27417425-27417502)
chr7 (191-251)||(30740717-30740777)
chr7 (185-256)||(6330985-6331056)
chr7 (178-253)||(10463431-10463506)
chr7 (191-250)||(28642476-28642535)
chr7 (200-250)||(3495748-3495797)
chr7 (191-245)||(14962609-14962663)
chr7 (191-245)||(15392081-15392135)
chr7 (102-179)||(43084053-43084131)
chr7 (191-256)||(7208043-7208108)
chr7 (70-151)||(8833444-8833524)
chr7 (191-256)||(9900581-9900646)
chr7 (191-256)||(21202324-21202389)
chr7 (191-256)||(23023566-23023631)
chr7 (191-256)||(23064437-23064502)
chr7 (115-252)||(29156105-29156240)
chr7 (191-256)||(39035887-39035952)
chr7 (191-256)||(45983619-45983684)
chr7 (191-256)||(45986233-45986298)
chr7 (140-180)||(3495701-3495741)
chr7 (163-227)||(4900027-4900091)
chr7 (195-251)||(15654742-15654798)
chr7 (191-251)||(33574868-33574928)
[»] chr4 (74 HSPs)
chr4 (102-253)||(47379314-47379465)
chr4 (29-247)||(38499223-38499438)
chr4 (28-253)||(44452020-44452242)
chr4 (98-256)||(55283110-55283268)
chr4 (75-256)||(53323754-53323935)
chr4 (73-283)||(52947869-52948078)
chr4 (73-256)||(30331413-30331595)
chr4 (141-256)||(1870152-1870266)
chr4 (102-256)||(4850100-4850254)
chr4 (70-256)||(33177556-33177741)
chr4 (70-253)||(34513156-34513337)
chr4 (78-212)||(6817979-6818111)
chr4 (103-256)||(10321702-10321855)
chr4 (102-218)||(47939750-47939866)
chr4 (102-256)||(33689428-33689582)
chr4 (103-256)||(31316547-31316700)
chr4 (103-227)||(51876014-51876139)
chr4 (73-252)||(20178014-20178192)
chr4 (102-256)||(25422073-25422226)
chr4 (102-240)||(44209633-44209771)
chr4 (75-256)||(38114347-38114527)
chr4 (73-238)||(13603761-13603924)
chr4 (160-256)||(13718110-13718205)
chr4 (140-256)||(35060961-35061076)
chr4 (102-256)||(19522718-19522872)
chr4 (168-227)||(47463437-47463496)
chr4 (79-218)||(28448557-28448695)
chr4 (98-256)||(44289679-44289838)
chr4 (102-245)||(48220032-48220175)
chr4 (102-256)||(37329493-37329649)
chr4 (33-253)||(28163863-28164079)
chr4 (102-193)||(43938007-43938099)
chr4 (98-256)||(48082445-48082604)
chr4 (102-220)||(22068103-22068222)
chr4 (102-251)||(23473617-23473767)
chr4 (163-256)||(10085553-10085646)
chr4 (103-252)||(35351804-35351954)
chr4 (103-252)||(55938075-55938224)
chr4 (160-253)||(44452943-44453036)
chr4 (75-251)||(47309414-47309589)
chr4 (140-252)||(42972873-42972983)
chr4 (160-256)||(53423700-53423795)
chr4 (165-256)||(34509721-34509812)
chr4 (139-193)||(35821167-35821221)
chr4 (155-256)||(7490753-7490852)
chr4 (191-256)||(29445627-29445692)
chr4 (191-256)||(47875980-47876045)
chr4 (191-256)||(53238021-53238086)
chr4 (168-218)||(3873324-3873374)
chr4 (200-250)||(11670211-11670260)
chr4 (174-212)||(22309551-22309589)
chr4 (191-256)||(343909-343974)
chr4 (191-256)||(6203161-6203226)
chr4 (191-256)||(8949613-8949678)
chr4 (191-256)||(15636910-15636975)
chr4 (191-256)||(19320865-19320930)
chr4 (187-256)||(23064045-23064114)
chr4 (191-256)||(24281918-24281983)
chr4 (191-256)||(28540849-28540914)
chr4 (191-256)||(28756306-28756371)
chr4 (191-256)||(31312137-31312202)
chr4 (191-256)||(34680378-34680443)
chr4 (191-256)||(38698876-38698941)
chr4 (191-256)||(42931203-42931268)
chr4 (191-256)||(47016291-47016356)
chr4 (191-256)||(50642652-50642717)
chr4 (191-256)||(52224535-52224600)
chr4 (191-256)||(52788904-52788969)
chr4 (191-256)||(52823402-52823467)
chr4 (190-251)||(53231266-53231327)
chr4 (205-250)||(54065759-54065804)
chr4 (191-251)||(16618902-16618962)
chr4 (191-251)||(25768072-25768132)
chr4 (191-251)||(29246951-29247011)
[»] chr2 (54 HSPs)
chr2 (75-250)||(32319662-32319836)
chr2 (102-250)||(44492889-44493037)
chr2 (102-256)||(31771322-31771476)
chr2 (28-253)||(32318150-32318374)
chr2 (97-253)||(14201103-14201261)
chr2 (75-256)||(30784165-30784344)
chr2 (97-253)||(3117975-3118131)
chr2 (97-253)||(32319082-32319238)
chr2 (102-256)||(43932869-43933023)
chr2 (140-256)||(42487804-42487919)
chr2 (103-253)||(9111576-9111726)
chr2 (102-250)||(10357321-10357469)
chr2 (78-253)||(35498571-35498745)
chr2 (160-256)||(40365019-40365114)
chr2 (73-227)||(25666016-25666170)
chr2 (102-256)||(41120744-41120898)
chr2 (139-256)||(3043496-3043612)
chr2 (97-256)||(23496560-23496720)
chr2 (102-221)||(33832292-33832412)
chr2 (133-256)||(42274436-42274558)
chr2 (162-256)||(7439287-7439380)
chr2 (28-207)||(9111859-9112036)
chr2 (104-256)||(36512110-36512263)
chr2 (73-251)||(8737951-8738129)
chr2 (102-209)||(20719212-20719320)
chr2 (140-211)||(33001040-33001111)
chr2 (160-249)||(19058784-19058873)
chr2 (160-256)||(29809465-29809560)
chr2 (102-252)||(6457272-6457422)
chr2 (165-244)||(8094797-8094876)
chr2 (146-256)||(20719998-20720108)
chr2 (188-250)||(10287226-10287288)
chr2 (155-256)||(25100644-25100744)
chr2 (103-253)||(31436045-31436195)
chr2 (163-252)||(34073711-34073800)
chr2 (191-256)||(20973238-20973303)
chr2 (160-253)||(37593014-37593106)
chr2 (188-256)||(11708235-11708303)
chr2 (102-180)||(20721426-20721505)
chr2 (200-250)||(20721370-20721419)
chr2 (21-119)||(3118778-3118874)
chr2 (191-256)||(10214858-10214923)
chr2 (191-256)||(10972466-10972531)
chr2 (191-256)||(12620328-12620393)
chr2 (75-180)||(13027658-13027762)
chr2 (191-256)||(13803280-13803345)
chr2 (191-256)||(14542200-14542265)
chr2 (201-250)||(21439973-21440021)
chr2 (191-256)||(35516352-35516417)
chr2 (191-256)||(36218621-36218686)
chr2 (191-256)||(41178700-41178765)
chr2 (102-169)||(20701262-20701330)
chr2 (223-251)||(35424813-35424841)
chr2 (189-245)||(43861710-43861766)
[»] scaffold0005 (2 HSPs)
scaffold0005 (28-245)||(282867-283082)
scaffold0005 (97-253)||(283375-283531)
[»] scaffold0148 (1 HSPs)
scaffold0148 (75-256)||(35255-35433)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-252)||(17515-17665)
[»] scaffold0651 (1 HSPs)
scaffold0651 (103-256)||(6998-7151)
[»] scaffold0445 (1 HSPs)
scaffold0445 (102-250)||(6058-6206)
[»] scaffold0707 (1 HSPs)
scaffold0707 (133-256)||(7035-7157)
[»] scaffold1160 (1 HSPs)
scaffold1160 (133-227)||(1195-1289)
[»] scaffold1190 (1 HSPs)
scaffold1190 (133-215)||(366-448)
[»] scaffold0097 (4 HSPs)
scaffold0097 (102-209)||(23050-23158)
scaffold0097 (146-256)||(23836-23946)
scaffold0097 (102-180)||(25254-25333)
scaffold0097 (200-250)||(25198-25247)
[»] scaffold0024 (1 HSPs)
scaffold0024 (164-256)||(47985-48077)
[»] scaffold0051 (1 HSPs)
scaffold0051 (97-255)||(52346-52504)
[»] scaffold0627 (1 HSPs)
scaffold0627 (163-227)||(6999-7063)
[»] scaffold0734 (1 HSPs)
scaffold0734 (201-256)||(3281-3336)
[»] scaffold0514 (1 HSPs)
scaffold0514 (102-215)||(6350-6464)
[»] scaffold0245 (1 HSPs)
scaffold0245 (97-238)||(24927-25067)
[»] scaffold0640 (1 HSPs)
scaffold0640 (201-252)||(4031-4082)
[»] scaffold1191 (1 HSPs)
scaffold1191 (102-180)||(675-754)
[»] scaffold0093 (2 HSPs)
scaffold0093 (18-53)||(19974-20009)
scaffold0093 (102-180)||(48968-49047)
[»] scaffold0562 (1 HSPs)
scaffold0562 (168-218)||(4143-4193)
[»] scaffold0618 (1 HSPs)
scaffold0618 (191-256)||(9310-9375)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 26268944 - 26268703
Alignment:
Q  16 caaaatttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnt-tatacactcagttttattcccttctcaaatccaaatttgtttaa 114  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||          ||||||||||||||||||||| |||||||||||| ||| |||||    
T  26268944 caaaatttaatacttacttaattttaatagtgtttttagtccctataaaaaaaaactatacactcagttttattcccctctcaaatccaattttttttaa 26268845  T
Q  115 ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttct 214  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26268844 ttatgtttaaaatattatgttttcgaacaattttttgtagacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttct 26268745  T
Q  215 acgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  26268744 acgcccatatttttattacttttatcttgaacttttgtcgtt 26268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 75 - 252
Target Start/End: Complemental strand, 15772179 - 15772003
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||||||| ||||| || |||| |||||||||||||||||| ||||||| ||| |||||  ||||| |||||||| |||| |||||||||||||||    
T  15772179 cactcagttttagtccctcct-aaattcaaatttgtttaattatgcttaaaatcttaagtttttaaacaattttttgtagacgtgttaagaacattacta 15772081  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||| | |||||| || ||||||||||||||||||||    
T  15772080 aaagttcctccgcaaaaaattatctcaaaatttgatttctacgtcgaaatttttgtttcttttatcttgaacttttgt 15772003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 54269206 - 54268980
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||||||||||| |||||||||||||         |||| |||||||||||| ||||| || |||| |||||||| ||||||||| ||||| |    
T  54269206 cttacttaattttaatagtatttttagtcctta-aacaaaaattatgcactcagttttaatccctact-aaattcaaatttggttaattatgcttaaact 54269109  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| ||||| |||||| |||||| || ||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| |||||  ||||    
T  54269108 cttaagtttttgaacaattttttgcatgcgtgttaagaacattactaaaagttcctctgtaaaaaattatctcaaaatttgatttctaagtccaattttt 54269009  T
Q  228 tattacttttatcttgaacttttgtcgtt 256  Q
    | || ||||||||||||  ||||||||||    
T  54269008 tgttgcttttatcttgattttttgtcgtt 54268980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 19601555 - 19601706
Alignment:
Q  102 caaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||||||||||||| | |||||||||  ||||   ||||| | || | ||||||||||||||||||||| |||  |||||||||| | ||    
T  19601555 caaatttgtttaattatgtttaaactcttatgttttttaacattcttttgcaaacatgttaagaacattactaaaagttcctccacaaaaaattatcgca 19601654  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||||| |||||||| |||| |||||| ||||||||||||||||||||||||    
T  19601655 aaatttaatttctacatccagatttttgttacttttatcttgaacttttgtc 19601706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 31991068 - 31991224
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||||||||| | ||| | ||| |||||| |||||| | | || |||| |||||||| |||||||| | |||||||| |||    
T  31991068 aaatctaaatttgtttaattatgtttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagtttatttgcaaaaactta 31991167  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||| |||||| |||||| |||||| |||||||||| |||||||||||||    
T  31991168 tctcaaaattttatttctgcgtccaaatttttgttacttttattttgaacttttgtc 31991224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 33476483 - 33476327
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | ||||||||||||| || |||||||| ||||||||||||||    
T  33476483 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaggtattaagaacatcacgaaaagtttatctgcaaaaaatta 33476384  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||| |||  | |||||| |||||| |||||||||| |||||||||||||    
T  33476383 tctcaaaattttattcatgcgtccagattttttttacttttattttgaacttttgtc 33476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 41928199 - 41927975
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| |    
T  41928199 cttacttaattataatagtgtttttagtccatataaaaaaa-ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaact 41928102  T
Q  128 attatgttttcgaacaactttttgtatacgtattaa-gaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattt 226  Q
     ||| | ||| |||||| |||||| | | || |||| ||||||||| |||||||  | ||||||||||||  ||||||||| |||||| |||||| ||||    
T  41928101 tttaagattttgaacaattttttgcacaagtgttaaagaacattacgaaaagttcatatgcaaaaaattatatcaaaattttatttctgcgtccaaattt 41928002  T
Q  227 ttattacttttatcttgaacttttgtc 253  Q
    || |||||||||| |||||||||||||    
T  41928001 ttgttacttttattttgaacttttgtc 41927975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 44555851 - 44556074
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| || ||||||||| ||||| || ||||  ||||||||||||||||| ||||| |    
T  44555851 cttacttaattataatagtgtttttagtccatataaaacaa-ttatgcattcagttttagtccctact-aaatttaaatttgtttaattatgcttaaact 44555948  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  |||||||||||||| |||||||||| |||||| |||||| | |||    
T  44555949 tttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctcaaaattttatttctgcgtccagaattt 44556048  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | ||| |||||| |||||||||||||    
T  44556049 tgttaattttattttgaacttttgtc 44556074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 32147002 - 32147156
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||| ||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  32147002 caaatttgtctaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 32147101  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||||| |||||||||| ||||||| ||||||| |||||    
T  32147102 aaaatttgatttatatgtccata-ttttattactcttatctttaacttttatcgtt 32147156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 33475476 - 33475626
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| | |||    
T  33475476 aaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatcacaa 33475575  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||| ||||||||||||| | |||| |||||||||| |||||||||||||    
T  33475576 aattttatttctacgtccagaattttgttacttttattttgaacttttgtc 33475626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 8576264 - 8576040
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||||||||||||| |||        |||| |||||||||||| ||| | || ||||| ||||||||||||||||||||||| |    
T  8576264 cttacttaattttaatagtgtttttagtccatataaaaaaa-ttatgcactcagttttagtccatact-aaatctaaatttgtttaattatgtttaaact 8576167  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacatt-actaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattt 226  Q
     ||| | ||| |||||| |||||| | | || ||||||||||| |  |||||||  | |||||||||||| |||||||||| ||||||  ||| | ||||    
T  8576166 tttaagattttgaacaattttttgcacaagtgttaagaacatttaggaaaagttcatatgcaaaaaattatctcaaaattttatttctgtgtctagattt 8576067  T
Q  227 ttattacttttatcttgaacttttgtc 253  Q
    || |||||||||| |||||||||||||    
T  8576066 ttgttacttttattttgaacttttgtc 8576040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 27492319 - 27492474
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||| ||||| |||||| |||||| |||| | || | |||||||||||||||||||| ||||||||||| | |    
T  27492319 caaatttgtttaatttatgtttaaattcttaggtttttgaacaattttttgcatacatgtttaaaacattactaaaagtttctccgcaaaaaattatcgc 27492418  T
Q  201 aaaatttgatttctacgtccatatttttattac-ttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| |||| | |||| |||| ||||||||| ||||||| |||||    
T  27492419 aaaatttgatttctacatcca-aattttgttactttttatctttaacttttttcgtt 27492474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 45420098 - 45419948
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||| ||| ||||| ||||| || ||||||||||  ||||| ||||| | ||  ||||| |||||| |||||| |||||| |||||||||||||||    
T  45420098 cactcagtattagtccctcctcaattc-aaatttgtttt-ttatgcttaaactcttgagtttttgaacaattttttgcatacgtgttaagaacattacta 45420001  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| |||||    
T  45420000 aaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccagatttt 45419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 253
Target Start/End: Original strand, 52701100 - 52701318
Alignment:
Q  33 ttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattat 132  Q
    ||||||||||||||||||||||||| |||        |||| |||||| ||||| | ||| || ||||| ||||||||||||||||| ||||| | |||     
T  52701100 ttaattttaatagtgtttttagtccatataaaaaaa-ttatgcactcaattttagtacctact-aaatctaaatttgtttaattatgcttaaacttttaa 52701197  T
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    | ||| |||||| |||||  | | || ||||||||||||| |||||||  ||| |||||||||| |||||||||| |||| | |||| | |||||| |||    
T  52701198 gattttgaacaattttttacacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctcaaaattttatttatgcgtctagatttttgtta 52701297  T
Q  233 cttttatcttgaacttttgtc 253  Q
    ||||||| |||||||||||||    
T  52701298 cttttattttgaacttttgtc 52701318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 23883647 - 23883525
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||    |||||||||||||||||||||| | |||| |||    
T  23883647 gtttttgaacaattttttgcatacgtgttaagaacattactaaaagttcctctgcaaaaaattgttacaaaatttgatttctacgtccaga-ttttgtta 23883549  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| || ||||| ||||    
T  23883548 attttatctttaagttttgccgtt 23883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 23917366 - 23917488
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||  | |||| ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| | || | |||    
T  23917366 gtttttgaacaattttttacaaacgtgttaagaacattactaaaagtttctctgcaaaaaattgtcgcaaaatttgatttctacgtcca-aattgtgtta 23917464  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     |||||| || |||||||||||||    
T  23917465 attttatttttaacttttgtcgtt 23917488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 37178947 - 37179101
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | |||  ||||  ||||| ||||| || |||| |||||||||||||||||||||  || ||||||||||| | |    
T  37178947 caaatttgtttaatttatgtttaaactcttaaattttttaacaattttttatagacgtgttaagaacattactaaaagttcatccgcaaaaaattatcgc 37179046  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | ||||||||| |||||||| ||||||| |||||    
T  37179047 aaaatttgatttatatgtccaga-ttttattacatttatctttaacttttatcgtt 37179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 53397101 - 53397255
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||  |||| ||||||||||||||||||||| ||| ||||||| ||| | |    
T  53397101 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtcgacgtgttaagaacattactaaaagttcctccgcaaaaatttatcgc 53397200  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | ||||||||||| |||||| ||||||| |||||    
T  53397201 aaaatttgatttatatgtccaga-ttttattacttctatctttaacttttatcgtt 53397255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 21749626 - 21749726
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| |||||||||||||||||||||||| |||||||||||  || ||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||    
T  21749626 acgtgttaagaacattactaaaagtttctatgcaaaaaattgtcttaaaatttaatttctacgtccaga-ttttgttaattttatctttaacttttgtcg 21749724  T
Q  255 tt 256  Q
    ||    
T  21749725 tt 21749726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 11045465 - 11045564
Alignment:
Q  156 cgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgt 255  Q
    ||||||||||| ||| ||||||||| ||||||||||||||  | |||||||||||||||||||||| | |||| ||| |||||||||||||||||| |||    
T  11045465 cgtattaagaaaattgctaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatcttgaacttttgccgt 11045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 19669705 - 19669860
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatatt-atgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagct 199  Q
    ||||||||||||||| ||||||||| | || | |||||  ||||| |||||||| |||| ||||||||||||||||| ||| ||| ||||||| |||       
T  19669705 caaatttgtttaatttatgtttaaactctttaagttttttaacaattttttgtagacgtgttaagaacattactaaatgttcctccgcaaaaagttattg 19669804  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  19669805 caaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 19669860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 32943006 - 32943117
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  32943006 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 32943105  T
Q  201 aaaatttgattt 212  Q
    ||||||||||||    
T  32943106 aaaatttgattt 32943117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 25250022 - 25250148
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| || |||||| | ||  ||||| ||| || |||||  | |||| |||||||||||||||||||||||| |||||||||||  | |    
T  25250022 caaatttgtttaatttatatttaaactcttgagtttttgaataattttttacagacgtgttaagaacattactaaaagtttctatgcaaaaaattgtcgc 25250121  T
Q  201 aaaatttgatttctacgtccatatttt 227  Q
    ||||||||||||||||||||| |||||    
T  25250122 aaaatttgatttctacgtccaaatttt 25250148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 45387457 - 45387558
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||  ||||||||||| | ||||||||||||| || ||||| | |||||||||||||||    
T  45387457 aacaattttttgtagacgtgttaagaacattactaaaagttcctacgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttat 45387555  T
Q  240 ctt 242  Q
    |||    
T  45387556 ctt 45387558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 29348311 - 29348433
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| | | || ||||||| ||||||||||||| || |||||||||||  | ||||||||||||| |||||||| | |||| |||    
T  29348311 gtttttgaacaattttttgcagaagtgttaagaatattactaaaagttcctttgcaaaaaattgtcgcaaaatttgatttttacgtccaga-ttttgtta 29348409  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| |||||||||||||    
T  29348410 attttatctttaacttttgtcgtt 29348433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 38173908 - 38174056
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  |  ||| ||||||||||||||||||||| || | |||||||||  | |    
T  38173908 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacattactaaaagttcctatacaaaaaattgtcgc 38174007  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||||||||| | | |||| ||| ||||||||| |||||||    
T  38174008 aaaatttgatttctacgtctaga-ttttgttaattttatctttaactttt 38174056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 39562843 - 39562684
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| | ||| | ||||||| |    
T  39562843 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatat 39562744  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     ||  |||||||||||||||||||||||||||| ||| || |||||| |||||||||||||    
T  39562743 cgc-aaaaatttgatttctacgtccatatttttgttagttatatcttaaacttttgtcgtt 39562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 53518073 - 53517953
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | | |||| |||||||||||||||||||||  ||| |||||||||  | |    
T  53518073 caaatttgtttaatttatgcttaaacttttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttcatctacaaaaaattgtcgc 53517974  T
Q  201 aaaatttgatttctacgtcca 221  Q
    |||||||||||||||||||||    
T  53517973 aaaatttgatttctacgtcca 53517953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 25232699 - 25232813
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||| |||||| | | || ||||||||||||| |||| ||  ||| |||||||||| |||||||||| |||| | |||||| |||||| |||||||||    
T  25232699 gaacaattttttgcacaagtgttaagaacattacgaaaatttcatctacaaaaaattatctcaaaattttatttatgcgtccagatttttgttactttta 25232798  T
Q  239 tcttgaacttttgtc 253  Q
    | || ||||||||||    
T  25232799 ttttaaacttttgtc 25232813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 44556882 - 44556784
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttt 237  Q
    |||||| |||||| | | ||||||||||||| || |||||||| |||||||||||||| ||||||||||  || ||| ||||| |||||| ||||||||    
T  44556882 gaacaattttttgcacaagtattaagaacatcacaaaaagtttatctgcaaaaaattatctcaaaattttgttcctatgtccagatttttgttactttt 44556784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 46295053 - 46295206
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| | ||| | ||||||| |    
T  46295053 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaaatttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatat 46295152  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
     ||  |||||||||||||||||||||||||||| |||||| |||||| |||||||    
T  46295153 cgc-aaaaatttgatttctacgtccatatttttgttacttatatcttaaactttt 46295206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 44809090 - 44808975
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||| | |||| ||||||| ||||||||||||| || |||||||| ||  | ||||||||||||| ||||| || | |||| ||| ||||||    
T  44809090 aacaattttttgcacacgtgttaagaatattactaaaagttcctttgcaaaaagttgtcgcaaaatttgatttttacgt-caaaattttgttaattttat 44808992  T
Q  240 cttgaacttttgtcgtt 256  Q
    ||| |||||||||||||    
T  44808991 ctttaacttttgtcgtt 44808975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 40762889 - 40762735
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| ||||  || |||| ||||||||||||||||||| | |||| ||||| |||| |      
T  40762889 caaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttgatagacgtgttaagaacattactaaaagctcctctacaaaatattatcgt 40762790  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||| | | |||| ||| ||| ||||| |||||||| ||||    
T  40762789 aaaatttgatttctacgtcaaga-ttttgttaatttcatctttaacttttgccgtt 40762735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 41927246 - 41927367
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| |||||||||||||||||||||||   ||| | ||| |||||| |||||| | | || ||||||||||    
T  41927246 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgtttaaatagttaagattttgaacaattttttgcacaagtgttaagaacat 41927344  T
Q  170 tactaaaagtttctctgcaaaaa 192  Q
     || |||||||| ||||||||||    
T  41927345 cacaaaaagtttatctgcaaaaa 41927367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 221
Target Start/End: Original strand, 34995569 - 34995657
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtcca 221  Q
    ||||| |||||| ||||| || |||| || | |||||||||||||||| |||  | ||||||||| |||||| ||||||||||||||||    
T  34995569 gtttttgaacaattttttatagacgtgttcaaaacattactaaaagttgctccacgaaaaattagttcaaaaattgatttctacgtcca 34995657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 28260466 - 28260412
Alignment:
Q  199 tcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||| |||||||| || | |||||| ||||||||||||||||||||||||    
T  28260466 tcaaaatttaatttctacatctagatttttgttacttttatcttgaacttttgtc 28260412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 45235635 - 45235541
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatt 195  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| ||||| || |||| |||||||||||| |||||||| ||| ||||||||||    
T  45235635 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttatagacgtgttaagaacattattaaaagttcctccgcaaaaaatt 45235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 46529623 - 46529766
Alignment:
Q  110 tttaattatgtttaaaatattatgttttcgaacaactttttgtatac--gtattaagaacattactaaaa-gtttctctgcaaaaaattagctcaaaatt 206  Q
    |||||||||| ||||| | ||| |||||  || || |||||||| ||  || |||||||||||||||||| ||| || |||||||| ||| |||||| ||    
T  46529623 tttaattatgcttaaactcttaagttttttaataattttttgtagacatgtgttaagaacattactaaaaagttcctttgcaaaaa-ttaactcaaagtt 46529721  T
Q  207 tgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||||||  || | ||||||||| | |||||||||||||||||||||    
T  46529722 tgatttgaactttcatatttttct-acttttatcttgaacttttgt 46529766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 43127673 - 43127738
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| |||||||||||| ||||| ||||    
T  43127673 aaattagctcaaaattttatttttaggtccaaattttcattagttttatcttgaatttttggcgtt 43127738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 9018125 - 9018180
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||| ||| ||||||||||| ||| ||||||||| |||||||||||||    
T  9018125 caaaatttgatttttacttccatatttttgtta-ttttatctttaacttttgtcgtt 9018180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 36253314 - 36253378
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||| || |||| || ||||| |||||||||| ||| |||||||| |||||    
T  36253314 caaaaaattagctcaaaaatttatttttaggtccaaatttttattattttaatcttgaatttttg 36253378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 55006143 - 55006203
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| |||||    
T  55006143 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttg 55006203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 3173798 - 3173707
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaa 192  Q
    ||||||||||||||| ||| ||||| | ||   |||| |||||| |||||| | |||  ||||||||||||||| |||||||||||||||||    
T  3173798 caaatttgtttaatttatgattaaattcttgaatttttgaacaattttttgcagacgcgttaagaacattactataagtttctctgcaaaaa 3173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 250
Target Start/End: Original strand, 28685326 - 28685455
Alignment:
Q  115 ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttct 214  Q
    ||||| ||||| | ||| ||||| |||||| | |||| | |||| ||||||||||||||||||||| ||| | ||||||     ||||||||| |||| |    
T  28685326 ttatgcttaaactcttaagtttttgaacaattatttgcagacgtgttaagaacattactaaaagttcctccgtaaaaaa-----tcaaaatttaatttat 28685420  T
Q  215 acgtccatatttttattacttttatcttgaactttt 250  Q
    | ||||| | |||||||| ||||||||| |||||||    
T  28685421 atgtcca-aattttattaattttatctttaactttt 28685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 44557816 - 44557765
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaa 191  Q
    ||||| |||||||| |||| ||||||||||||||||||||| | ||||||||    
T  44557816 aacaattttttgtagacgtgttaagaacattactaaaagttccgctgcaaaa 44557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 44665193 - 44665122
Alignment:
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||||||||   |||||||||| |||||||||||||| || ||| | ||||| |||| ||||||||||||    
T  44665193 aaaagtttctccttaaaaaattagatcaaaatttgatttttaggtcaaaattttcattagttttatcttgaa 44665122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 53439251 - 53439420
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaatt-atg 119  Q
    |||| |||||| ||||||||||||||  ||||||||||||         |||| |||||||| ||| || || ||||| || |||||||||||||| |||    
T  53439251 tttagtacttacttaattttaatagttgttttagtcctta-caaaaatattatgcactcagtattagtctctgctcaattc-aaatttgtttaatttatg 53439348  T
Q  120 tttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaa 191  Q
     ||||| | ||| |||||  ||||| ||||| |  |||| ||||||||||||||||||||| ||| ||||||    
T  53439349 cttaaactcttacgttttttaacaattttttttcgacgtgttaagaacattactaaaagttcctccgcaaaa 53439420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 117637 - 117588
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  117637 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 117588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 23251656 - 23251722
Alignment:
Q  184 ctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||| || |||||||||||||| |||| || ||||| |||||| ||| |||||||||||| ||||    
T  23251656 ctgcaataagttagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaattttt 23251722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 30778739 - 30778809
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  30778739 gcaataaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 30778809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 44557769 - 44557720
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  44557769 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 44557720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 50615274 - 50615225
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  50615274 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 50615225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 869560 - 869495
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  869560 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 869495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 3078488 - 3078423
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  3078488 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 3078423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 10182218 - 10182283
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  10182218 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 10182283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 20044030 - 20044103
Alignment:
Q  185 tgcaaaaaattagctcaaaatttgatttctacgtcca-tatttttattactttt-atcttgaacttttgtcgtt 256  Q
    |||||||||||| || |||||||||||||||| || |  ||| | ||||||||| |||||||||||||||||||    
T  20044030 tgcaaaaaattaacttaaaatttgatttctacatctaggattatgattacttttaatcttgaacttttgtcgtt 20044103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 23878715 - 23878650
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  23878715 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 23878650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 28055244 - 28055309
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  28055244 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 28055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 28065669 - 28065734
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  28065669 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 28065734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 31269701 - 31269636
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| || | |||||||||||| ||||| ||||    
T  31269701 aaattagctcaaaattttatttttaggtccaaattttcatcagttttatcttgaatttttggcgtt 31269636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 36777983 - 36777918
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  36777983 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 36777918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 45454451 - 45454386
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  45454451 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 45454386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 50362507 - 50362442
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  50362507 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 50362442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 53328629 - 53328564
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  53328629 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 53328564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 40126876 - 40126936
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  40126876 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 40126936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 41927371 - 41927415
Alignment:
Q  209 atttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||||| |||||| |||||| |||||||||| |||||||||||||    
T  41927371 atttctgcgtccagatttttgttacttttattttgaacttttgtc 41927415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 53947673 - 53947613
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  53947673 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 53947613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 70 - 250
Target Start/End: Complemental strand, 22167195 - 22167016
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||||| ||||||||||||||||||||| | ||||| ||| |||||| |||||||| |||||||||||||||    
T  22167195 ttatgcactcaattttagtccctact-aaatccagatttgtttaattatgtttaaactcttatgcttttgaacaattttttgtagacgtattaagaacat 22167097  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||  || | |||||||||  ||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  22167096 tactaaaagttcatccgtaaaaaattatttcaaaatttgatttctatgtccatatttttgttaattttatcttgaaatttt 22167016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 18261491 - 18261309
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||| ||| ||| ||||||| || ||||||||||||||||| ||||| | ||| |||||| ||||   ||||  | |||| |||||||||||||||    
T  18261491 cactcagtattaatcctttctcaattc-aaatttgtttaattatgcttaaattcttaagttttcaaacattcttttacaaacgtgttaagaacattacta 18261393  T
Q  175 aaagtttctctgcaaaaaa--ttagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||| ||||||||||||  ||| | |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  18261392 aaagttcctctgcaaaaaaaattatcgcaaaatttgatttctacgtccagatttttgttagttttatcttgaacttttgtcgtt 18261309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 43210946 - 43210764
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    ||||||||| || |||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||||| | || ||||||||||    
T  43210946 ttatacacttaggtttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgtacaagtgttaagaacat 43210848  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||  |||||||  | |||||||||||| |||||||||| |||||| |||||| |||||| |||||||||| |||||||||||||    
T  43210847 taagaaaagttcttatgcaaaaaattatctcaaaattttatttcttcgtccagatttttgttacttttattttgaacttttgtc 43210764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 2263147 - 2262931
Alignment:
Q  33 ttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattat 132  Q
    ||||||||||||||||||||||||| |||        |||  |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| | |||     
T  2263147 ttaattttaatagtgtttttagtccatataaaaa---ttacgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaa 2263052  T
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
      ||| |||||| |||||| | | || ||||||||||||| |||||||  |||||||||||||| |||||||||| |||| | ||| || |||||| |||    
T  2263051 aattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaaattatctcaaaattttatttatgcgtacagatttttgtta 2262952  T
Q  233 cttttatcttgaacttttgtc 253  Q
    ||||||| |||||||||||||    
T  2262951 cttttattttgaacttttgtc 2262931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 10463717 - 10463897
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||    
T  10463717 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattact 10463815  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| || |||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  10463816 aaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 10463897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 13920069 - 13920217
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| ||||| |||||  ||||| |||||||| |||| |||||||||||| |||||||| ||| ||||||||||| | |    
T  13920069 caaatttgtttaatttatgcttaaactattaagttttttaacaattttttgtagacgtgttaagaacattaataaaagttcctccgcaaaaaattatcgc 13920168  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||| || ||||| | |||||||||||||||||| |||||||    
T  13920169 aaaatttgatttatatgtcca-aattttattacttttatctttaactttt 13920217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 19332462 - 19332618
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| ||| || |||||||| | || ||||||||||||| |||||||  |||  |||||||||    
T  19332462 aaatctaaatttgtttaattatgcttaaacttttaagattttgaataattttttgtacaagtgttaagaacattacgaaaagttcatctcgaaaaaatta 19332561  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||| |||||| |||||| |||||| |||||||||| |||||||||||||    
T  19332562 tctcaaaattttatttctgcgtccagattttttttacttttattttgaacttttgtc 19332618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 256
Target Start/End: Original strand, 8313192 - 8313369
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaa 176  Q
    ||||| ||| ||||||||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||  |||||| |||||||||||| ||||    
T  8313192 tcagtattagtcccttctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacatacgtgttaagaacattattaaa 8313290  T
Q  177 agtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||  | |||||||||||  | |||||||||||||||||||||||| |||| ||| |||||| || |||||||||||||    
T  8313291 agttcttatgcaaaaaattgtcgcaaaatttgatttctacgtccata-ttttgttaattttatttttaacttttgtcgtt 8313369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 24637228 - 24637079
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    |||||||| |||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  24637228 caaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 24637129  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||| |||| | |||||||||||||||||| || |||||    
T  24637128 aaaatttgatttctacttccaga-ttttattacttttatctttaagttttg 24637079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 8218360 - 8218149
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaa 126  Q
    |||| ||||||||||||||| ||||||||||||          ||| |||||||| ||| ||||| ||||| || |||||||||||||| ||| |||||     
T  8218360 cttacttaattttaatagtggttttagtccttacaaaaaatactatgcactcagtattagtccctgctcaattc-aaatttgtttaatttatgcttaaac 8218262  T
Q  127 tattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattt 226  Q
    | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| |||||||||||   ||||||||||||| || ||||| | ||    
T  8218261 tcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattattgcaaaatttgatttatatgtccaga-tt 8218163  T
Q  227 ttattacttttatc 240  Q
    ||||||||||||||    
T  8218162 ttattacttttatc 8218149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 37103092 - 37103192
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||    
T  37103092 acgtgttaagaacattactaaaagttcctctgcaaaaaattatctcaaaatttaatttctacgtccaga-ttttgttaattttatctttaacttttgtcg 37103190  T
Q  255 tt 256  Q
    ||    
T  37103191 tt 37103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 282
Target Start/End: Complemental strand, 30698974 - 30698790
Alignment:
Q  98 aatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattag 197  Q
    |||||||||||||||||||||| ||||| | ||   ||||  |||||  ||||||| || |||||||||||||||  |||||  |||| ||||| ||||     
T  30698974 aatccaaatttgtttaattatgcttaaattcttgaatttttaaacaatcttttgtacacctattaagaacattacggaaagtccctctacaaaatattaa 30698875  T
Q  198 ctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgttnnnnnnnttcatatttaattcatctc 282  Q
    ||||||||||||||||||||| || ||||||| |||| || ||||||| ||||||||||       |||||||||||||| ||||    
T  30698874 ctcaaaatttgatttctacgttcagatttttactactcttttcttgaatttttgtcgtttaaaaaattcatatttaattcttctc 30698790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 41139031 - 41139185
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||  | ||| |||||  ||||| |||||||| || | ||||||||||||||||||||| ||| ||||||||||| | |    
T  41139031 caaatttgtttaatttatgcttaatctcttaagttttttaacaattttttgtagacatgttaagaacattactaaaagttcctccgcaaaaaattatcgc 41139130  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  41139131 aaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 41139185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 10674621 - 10674794
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||| ||||| ||||| || ||||| |||||||| |||||||| ||||| | ||| | ||| |||||| |||||  | | || |||| ||||||||||    
T  10674621 cactcaattttagtccctact-aaatctaaatttgtataattatgcttaaacttttaagattttgaacaattttttacaaaagtgttaaaaacattacta 10674719  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttt 249  Q
    ||||||  | | |||||||| | ||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  10674720 aaagttcatatacaaaaaatcatctcaaaattttgtttctacgtccatatttttgttacttttatcttgaacttt 10674794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 40272464 - 40272614
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||||    
T  40272464 aaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctcaa 40272563  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||| |||||| |||||| | |||| |||||||||| || ||||||||||    
T  40272564 aattttatttctgcgtccagaattttgttacttttattttaaacttttgtc 40272614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 16966014 - 16965878
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||||||||| | ||| |||||  |||||  ||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | ||    
T  16966014 aaatttgtttaatttatgtttaaagtcttacgttttttaacaatattttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 16965915  T
Q  202 aaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||||||||| || ||||| | |||||||||||||||    
T  16965914 aaatttgatttttatgtccaga-ttttattacttttat 16965878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 27335636 - 27335790
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| |||||| ||| || ||||||||||||||||||||| ||||| ||||||||  | |    
T  27335636 caaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcatatgtgttaagaacattactaaaagttcctctgtaaaaaattgtcgc 27335735  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| |||| ||||| |||| ||| ||||||||| |||||||||||||    
T  27335736 aaaatttgatttttacgcccata-ttttgttaattttatctttaacttttgtcgtt 27335790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 42877899 - 42877746
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||  | |    
T  42877899 caaatttgtttaattcatgcttaaactcttgagtttttaaacaa-tttttgtagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgc 42877801  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||||||| | |||| ||| ||||||||| | |||||||||||    
T  42877800 aaaattttatttctacgtccaga-ttttgttaattttatctttatcttttgtcgtt 42877746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 43441149 - 43441011
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| | || |||||||||||| |||||||| ||| ||||||||||| | |    
T  43441149 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattattaaaagttcctccgcaaaaaattatcgc 43441050  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatc 240  Q
    |||||||||||| || ||||||| ||||||||||||||||    
T  43441049 aaaatttgatttatatgtccata-ttttattacttttatc 43441011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 8336823 - 8336998
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||    |||| ||||||||||||||    
T  8336823 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattact 8336921  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||| || |||||||||||  | |||||||||||||||||||| | | |||| ||| ||||||||| ||||||||    
T  8336922 aaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtctaga-ttttgttaattttatctttaacttttg 8336998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 28616320 - 28616165
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtat--taagaacattactaaaagtttctctgcaaaaaat 194  Q
    |||| ||||||||||||||||   ||||||| ||||||||| ||||||  |||||  |||||||  |||||||||||||||||||||||   ||||||||    
T  28616320 aaatacaaatttgtttaattaaacttaaaattttatgtttt-gaacaa--ttttggttacgtatgttaagaacattactaaaagtttcttcacaaaaaat 28616224  T
Q  195 tagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     | ||||||||||||||||||||| |  ||||||  ||||||||| ||||| |||||||    
T  28616223 catctcaaaatttgatttctacgttctgatttttgctacttttatgttgaagttttgtc 28616165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 2003958 - 2004112
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||||||||||  ||||| |||||||||||||||||||||  |||||||||||||  | |    
T  2003958 caaatttgtttaatttatgcttaaactcttgagtttttgaacaactttttgcgtacgtgttaagaacattactaaaagttcatctgcaaaaaattgtcgc 2004057  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||| |||  |||||||| |||||||| ||||    
T  2004058 aaaatttgatttttatgtccaga-ttttgttaactttatctttaacttttgccgtt 2004112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 27307825 - 27307979
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| |||| ||||||||| ||||||||| |||||||||||  | |    
T  27307825 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaacattactgaaagtttctatgcaaaaaattgtcgc 27307924  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||| | | |||| ||| ||||||||| |||||||| ||||    
T  27307925 aaaatttgatttctacgtcaaga-ttttgttaattttatctttaacttttgccgtt 27307979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 43209900 - 43210034
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    |||| |||||||||||| || || | ||| | ||| |||||| |||||| | | |||||||||||||||| |||||||  | |||||||||||| |||||    
T  43209900 aaatctgtttaattatgcttgaacttttaagattttgaacaattttttgcacaagtattaagaacattaccaaaagttcttatgcaaaaaattatctcaa 43209999  T
Q  203 aatttgatttctacgtccatatttttattactttt 237  Q
    ||||| |||||| |||||| |||||| ||||||||    
T  43210000 aattttatttcttcgtccagatttttcttactttt 43210034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 1683395 - 1683300
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| |||||||||||||| | || |||||||||||  | ||||||||||||| |||||||||| |||||||||||||||| | |||||||||||||    
T  1683395 ttaacaacattactaaaagctcctatgcaaaaaattgtcacaaaatttgatttatacgtccata-ttttattacttttatcattaacttttgtcgtt 1683300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 14049963 - 14049896
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattttt 228  Q
    |||||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||    
T  14049963 ttaagaacattactaaaagtttctccacaaaaa-ttatctcaaaatttgatttctacgtccatattttt 14049896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 30394082 - 30394241
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| | ||| | ||||||| |    
T  30394082 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatat 30394181  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     ||  |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  30394182 cgc-aaaaatttgatttctacgtccatatttttgttacttatatcttaaacttttgtcgtt 30394241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 22023356 - 22023237
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||   |||| |||||| |||||||| |||| ||||||||||||||||||||| ||| | ||||||||  | |    
T  22023356 caaatttgtttaatttatgcttaaactcttgaatttttgaacaattttttgtagacgtgttaagaacattactaaaagttcctcggtaaaaaattgtcgc 22023257  T
Q  201 aaaatttgatttctacgtcc 220  Q
    ||||||||||||||||||||    
T  22023256 aaaatttgatttctacgtcc 22023237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 31211253 - 31211343
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||||||| ||||||| |||||||   |||||||||||||||||||||  | ||||||||||| |||||| ||||||||    
T  31211253 ttaagaacattactaaaagttcctctgcataaaattattgcaaaatttgatttctacgtcccga-ttttattacttatatctttaacttttg 31211343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 40158272 - 40158422
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | |||||| ||||||||||||| ||||||| |||| ||||||| |  | ||    
T  40158272 aaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcatacgtgttaagaacattacaaaaagttcctctacaaaaaaatttcgca 40158371  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||| ||||||||||||  ||| ||| ||||||||| ||||||||||    
T  40158372 aaatttgatatctacgtccata-atttgttaattttatctttaacttttgtc 40158422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 17742376 - 17742485
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||| | |||| ||||||||||||||||||||| ||||| |||| |||  | |||||||||||||||||||||| | |||| ||| ||||||||| ||    
T  17742376 tttttgcagacgtgttaagaacattactaaaagttcctctgtaaaatattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaa 17742474  T
Q  246 cttttgtcgtt 256  Q
    |||||| ||||    
T  17742475 cttttgccgtt 17742485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 9168786 - 9168689
Alignment:
Q  157 gtattaagaacattactaaaagtttctctgcaaaaaa-ttagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||| || |||||||| ||||||||||| ||| |||||||||  ||| || |||||| |||||| |||||||||| |||||||||||||    
T  9168786 gtattaagaacatcacgaaaagtttatctgcaaaaaaattatctcaaaattatattcctgcgtccagatttttgttacttttattttgaacttttgtc 9168689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 34785485 - 34785385
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| ||||||| ||||||||||||| || |||||||||||  | ||||||||||||| |||||||| | |||| ||| ||||||||| |||||||||||    
T  34785485 acgtgttaagaatattactaaaagttcctttgcaaaaaattgtcgcaaaatttgatttttacgtcca-aattttgttaattttatctttaacttttgtcg 34785387  T
Q  255 tt 256  Q
    ||    
T  34785386 tt 34785385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 2005025 - 2005184
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| | |||| | ||| | ||||||| |    
T  2005025 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttatttaaaggtcctccgaaaaaaatat 2005124  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     ||  |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  2005125 cgc-aaaaatttgatttctacgtccatatttttcttacttatatcttaaacttttgtcgtt 2005184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 30734131 - 30734057
Alignment:
Q  182 ctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| ||||| |||| |||||||||||||||||||||||| |||||| ||||| || ||||||||||||| ||||    
T  30734131 ctctacaaaatattaactcaaaatttgatttctacgtccagatttttgttactcttttcttgaacttttgacgtt 30734057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 3548633 - 3548485
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||| | |||  |||| |||||| | |||||| | || | |||||||||| ||||| || |||  ||| |||||| |||||    
T  3548633 aaatttgtttaattatgcttaaacttttaactttttgaacaattatttgtagaagtgtcaagaacattattaaaaattcctcgacaagaaattatctcaa 3548534  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||| ||||||| |  || | |||  ||||||||||||||||||||||    
T  3548533 aatttaatttctatgcacaaaatttggttacttttatcttgaacttttg 3548485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 621883 - 621761
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||| | | |||| |||| |||||||||||||||| ||||||||||||||  | |||||| |||||||||| |||| | |||| |||    
T  621883 gtttttgaacaatttttggcagacgtgttaaaaacattactaaaagttcctctgcaaaaaattgtcgcaaaatgtgatttctacatccaga-ttttgtta 621785  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| || ||||| ||||    
T  621784 attttatctttaagttttgccgtt 621761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 32537627 - 32537537
Alignment:
Q  162 aagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||||||||||||||||||    ||| ||||| || ||||| |||| |||||||||||||||||||| |||||||| ||||||||| |||||    
T  32537627 aagaacattactaaaagttcacgtgc-aaaaagtatctcaagattttatttctacgtccatatttttgttacttttttcttgaactcttgtc 32537537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 34009992 - 34010082
Alignment:
Q  165 aacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| |||| |||||||||  | ||||||||||||||||||| || | |||| ||| ||||||||| |||||||| ||||    
T  34009992 aacattactaaaagttcctctccaaaaaattgacgcaaaatttgatttctacgttcaga-ttttgttaattttatcttaaacttttgccgtt 34010082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 4462239 - 4462111
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttg--tatacgtattaagaacattactaaaagtttctctgcaaaaaattagc 198  Q
    ||||| ||||||||| ||| ||||| | ||| ||||| |||||| ||||||  ||||||| || |||||||||||||||||| ||| ||||||| ||| |    
T  4462239 caaatgtgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatatacgtgtttagaacattactaaaagttcctccgcaaaaacttatc 4462140  T
Q  199 tcaaaatttgatttctacgtccatatttt 227  Q
      |||||| ||||||||| |||| |||||    
T  4462139 gtaaaattagatttctacatccagatttt 4462111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 8404645 - 8404530
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||| | |||| |||||||||||||||||| ||  |||||||||| ||  | ||||||||||||| || || || | |||||||| ||||||    
T  8404645 aacaattttttgcagacgtgttaagaacattactaaaaattcatctgcaaaaagttgtcgcaaaatttgatttttaagttca-aattttattaattttat 8404547  T
Q  240 cttgaacttttgtcgtt 256  Q
    ||| |||||||| ||||    
T  8404546 ctttaacttttgccgtt 8404530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 9687818 - 9687715
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||| ||||| |||||| |||||| | |||| ||||||||||||||    
T  9687818 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttaagtttttgaacaattttttgcagacgtgttaagaacattact 9687720  T
Q  174 aaaag 178  Q
    |||||    
T  9687719 aaaag 9687715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 42645259 - 42645087
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgt 120  Q
    |||||| |||| ||||||||||||||||||||| ||| |||        |||| |||||||||||| |||||  | ||||| |||||||||||||||||     
T  42645259 tttaatccttacttaattttaatagtgtttttaatccatataaaaa---ttatgcactcagttttagtccctatt-aaatctaaatttgtttaattatgc 42645164  T
Q  121 ttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattag 197  Q
    ||||| | ||| | ||| |||||| |||||| | |  ||||||||||||||  |||| ||  | |||||||||||||    
T  42645163 ttaaacttttaagattttgaacaattttttgcacaaatattaagaacattaaaaaaatttcatatgcaaaaaattag 42645087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 41193194 - 41193140
Alignment:
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattt 226  Q
    ||||||||| ||||||||||||||| | |||||||||| ||||||||||| ||||    
T  41193194 ctaaaagttcctctgcaaaaaattatcgcaaaatttgaattctacgtccagattt 41193140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 38693670 - 38693607
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||| | ||||||||||||| || ||||| ||||| |||||||||||||| |||||||    
T  38693670 gcaaaaaattatcgcaaaatttgatttatatgtccagatttt-attacttttatctttaactttt 38693607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 9924324 - 9924383
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtc 219  Q
    |||||||||||||| |||||| |||||||||| |||  | |||||||||| |||||||||    
T  9924324 ttaagaacattacttaaagttcctctgcaaaatattgtcacaaaatttgaattctacgtc 9924383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 26865969 - 26865890
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  26865969 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 26865890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 37812646 - 37812752
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  37812646 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 37812744  T
Q  170 tactaaaa 177  Q
    ||| ||||    
T  37812745 tacgaaaa 37812752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 18740802 - 18740732
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| ||||||||||||||||| |||| || ||||| ||||| |||| ||||| |||||| ||||| ||||    
T  18740802 gcaataaattagctcaaaattttatttttaggtccaaattttcattagttttaacttgaatttttggcgtt 18740732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 34527122 - 34527171
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  34527122 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 34527171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 42209432 - 42209370
Alignment:
Q  190 aaaattagctcaaaatttga-tttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||||| ||| |||| |||||    
T  42209432 aaaattagctcaaaatttgattttttaagtccaaatttttattactttaatcctgaaattttg 42209370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 4291804 - 4291739
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||| ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  4291804 gcaataaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 4291739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 6450129 - 6450194
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  6450129 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 6450194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 7573096 - 7573031
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||  ||| || ||||| |||||| ||| |||||||||||| ||||| ||||    
T  7573096 aaattagctcaaaattttgtttttaggtccaaatttttgttagttttatcttgaatttttggcgtt 7573031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 8315677 - 8315612
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  8315677 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 8315612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 27189058 - 27189123
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  27189058 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaaattttggcgtt 27189123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 27432572 - 27432507
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  27432572 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 27432507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 42992479 - 42992544
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| ||||||||| || ||||| ||||    
T  42992479 aaattagctcaaaattttatttttaggtccaaattttcattagttttatcttaaatttttgacgtt 42992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 4123186 - 4123246
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| ||||||| ||| | |||||  ||| |||||||||||| |||||    
T  4123186 aaattagctcaaaattttatttctaggtctaaattttcgttagttttatcttgaatttttg 4123246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 23425415 - 23425363
Alignment:
Q  199 tcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| ||  || ||||| ||| ||||||||||||||||||    
T  23425415 tcaaaatttgatttctaagtaaatttttttgttaattttatcttgaacttttg 23425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 32510524 - 32510484
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttat 61  Q
    |||||| |||| |||||||||||||| ||||||||||||||    
T  32510524 tttaatccttacttaattttaatagtttttttagtccttat 32510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 42852828 - 42852883
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||| | |||| |||||||||| || |||||| ||||||    
T  42852828 caaaatttgatttctacgtccaga-ttttgttacttttatttttaactttagtcgtt 42852883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 7565494 - 7565314
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||| ||||| ||||| || ||||||||||||||||| ||||||||||| | ||||| ||| |||||| || ||||| |||| |||| ||||||| ||    
T  7565494 cactcaattttagtccctact-aaatccaaatttgtttagttatgtttaaattcttatgcttttgaacaatttcttgtagacgtgttaaaaacattaata 7565396  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||| ||  || | ||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |||||    
T  7565395 aaaattcatccgtaaaaaattatctcaaaatttgatttctatgtccatatttttgttaattttatcttgaacttttctcgtt 7565314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 256
Target Start/End: Complemental strand, 31024350 - 31024191
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||||||||||||| ||||||||||||| | ||||||||| |||||| || ||||| |||| |||||| ||||||||||||||  || | || ||||||    
T  31024350 aaatccaaatttgttcaattatgtttaaactcttatgtttttgaacaatttcttgtagacgtgttaagaccattactaaaagttcatccgtaacaaatta 31024251  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     || ||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||    
T  31024250 tcttaaaatttgatttctatgttcatatttttgttaattttatcttgaacttttttcgtt 31024191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 12251688 - 12251506
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||| | || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  12251688 ttatgcactcagttttagtccgtact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 12251590  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||||  |||||||||||||| |||||||||| |||||| |||||| | |||| |||||||||| |||||||||||||    
T  12251589 tacgaaaagttcatctgcaaaaaattatctcaaaattttatttctgcgtccagaattttgttacttttattttgaacttttgtc 12251506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 11396966 - 11397189
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||| ||||||||| |||        |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| |||||      
T  11396966 cttacttaattttaatagtgcttttagtccatataaaaaaa-ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaaca 11397063  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||||||||| |||||| ||||||||||||    
T  11397064 tttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctcaaaattttatttctgcgtccatatttt 11397163  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | |||||||||| ||| |||||||||    
T  11397164 tgttacttttattttgcacttttgtc 11397189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 49767687 - 49767843
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | ||||||||||||| || |||||||| ||||||||||||||    
T  49767687 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgcaaaaaatta 49767786  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     ||||||| || |||||| |||||| |||||| |||||||||| || ||||||||||    
T  49767787 tctcaaaaatttatttctgcgtccagatttttgttacttttattttaaacttttgtc 49767843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 253
Target Start/End: Original strand, 27550768 - 27550950
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||| | || ||||| ||||||||||||||||  ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  27550768 ttatgcactcagttttagtccatact-aaatctaaatttgtttaattatacttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 27550866  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||||  |||||||||||||| |||||||||| |||||| |||||| | |||| |||||||||| |||||||||||||    
T  27550867 tacgaaaagttcatctgcaaaaaattatctcaaaattttatttctgcgtccagaattttgttacttttattttgaacttttgtc 27550950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 33707658 - 33707505
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||  ||||| | |||  |||| ||||||  ||||| | |||| || |||||||||||||||||| ||  ||||||||||| |||||    
T  33707658 aaatttgtttaattattcttaaactcttaattttttgaacaatcttttgcagacgtgttgagaacattactaaaagttccttcgcaaaaaattatctcaa 33707559  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| || |||||| || |||||||||||||||||| |||||    
T  33707558 aatttgatttctacgttcaaatttttgttgcttttatcttgaacttttatcgtt 33707505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 36368179 - 36368025
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||| | |    
T  36368179 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtttctccgcaaaaaattatcgc 36368080  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| |||| || ||||| | |||||||||||||||||| || |||| |||||    
T  36368079 aaaatttaatttatatgtccaga-ttttattacttttatctttaaattttatcgtt 36368025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 253
Target Start/End: Complemental strand, 49768720 - 49768546
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaa 177  Q
    ||||||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||    |||||| | | || ||||||||||||| ||||    
T  49768720 tcagttttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaaattttttttggacaagtgttaagaacattacgaaaa 49768622  T
Q  178 gtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||  | |||||||||||| |||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||    
T  49768621 gttcatttgcaaaaaattatctcaaaattttatttctacgtccagaattttattacttttattttgaacttttgtc 49768546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 52493534 - 52493683
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    |||||||| |||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  52493534 caaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 52493633  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||| |||| | |||||||||||||||||| || |||||    
T  52493634 aaaatttgatttctacttccaga-ttttattacttttatctttaagttttg 52493683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 30982671 - 30982517
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| |||||||| |||||||||||| ||| || |||||||| | |    
T  30982671 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaactttactaaaagttcctccgctaaaaattatcac 30982572  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  30982571 aaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 30982517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 30719485 - 30719640
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtat-acgtattaagaacattactaaaagtttctctgcaaaaaattagct 199  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  |  |||| |||||||||||||||||||||||| |||||||||||  |     
T  30719485 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaagacgtgttaagaacattactaaaagtttctatgcaaaaaattgtcg 30719584  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||| | |||| ||| ||||||||| |||||||| ||||    
T  30719585 caaaatttgatttctacgtcca-aattttgttaattttatctttaacttttgccgtt 30719640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 42971933 - 42972091
Alignment:
Q  77 ctcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaa 176  Q
    |||||||||| |||||||| |||| ||||| |||||||||||||||||| | ||| ||||| ||| ||  ||||||| |||| ||||||| |||||||||    
T  42971933 ctcagttttagtcccttct-aaattcaaatctgtttaattatgtttaaactcttaagttttagaaaaatcttttgtagacgtgttaagaatattactaaa 42972031  T
Q  177 agtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttt 237  Q
    ||||  ||   |||||||||||||||||||| |||||||||| || |||||  ||||||||    
T  42972032 agttcatc-caaaaaaattagctcaaaatttaatttctacgttcagattttcgttactttt 42972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 26805853 - 26805627
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||||||||||| |||||||||||||         || | |||||||| ||| |||||  |||| || ||||||||||||||||| ||||| |    
T  26805853 cttacttaattttaatagtatttttagtccttaattttttttttctgcactcagtattagtccctcttcaattc-aaatttgtttaattatgcttaaact 26805755  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||   ||||  ||||| |||||||| |||| ||||||| ||||||||||||| ||||||||||||    | ||||||||||||| ||||| || | |||    
T  26805754 cttgaatttttaaacaattttttgtagacgtgttaagaatattactaaaagttcctctgcaaaaaaaattcacaaaatttgatttttacgttcaga-ttt 26805656  T
Q  228 tattacttttatcttgaacttttgtcgtt 256  Q
    | ||| ||||||||| |||||||||||||    
T  26805655 tgttaattttatctttaacttttgtcgtt 26805627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 33709195 - 33709080
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| |||| ||||||||||| ||||||||| ||| ||||||||||| | ||||||||||||| || ||| | | |||||||||||||||    
T  33709195 aacaattttttgtagacgtgttaagaacattcctaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtcta-aattttattacttttat 33709097  T
Q  240 cttgaacttttgtcgtt 256  Q
    ||| ||||||| |||||    
T  33709096 ctttaacttttatcgtt 33709080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 47008920 - 47008781
Alignment:
Q  116 tatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttcta 215  Q
    |||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| ||||||||||||||    |||||||| |||||||    
T  47008920 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctctgcaaaaaattgttgcaaaatttaatttcta 47008821  T
Q  216 cgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||| | |||| ||| ||||||||| |||||||||||||    
T  47008820 cgtccaca-ttttgttaattttatctttaacttttgtcgtt 47008781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 13501212 - 13501366
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| |||| |||||||||||||||| || |||||||||||  | |    
T  13501212 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaataacattactaaaagttcctatgcaaaaaattgtcgc 13501311  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| | |||| ||| |||||| || |||||||| ||||    
T  13501312 aaaatttgatttctacgtccaga-ttttgttaattttatttttaacttttgccgtt 13501366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 31400225 - 31400380
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-tagct 199  Q
    ||||||||||||||| ||||||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| | ||| | ||||||| | ||     
T  31400225 caaatttgtttaatttatgtttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatatcgc- 31400323  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  31400324 aaaaatttgatttctacgtccatatttttgttacttatatcttaaacttttgtcgtt 31400380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 46597064 - 46596911
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||  || ||||||||||| | |    
T  46597064 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcatccgcaaaaaattatcgc 46596965  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||  ||  || ||||| |  ||||||||||||||||| ||||||| |||||    
T  46596964 aaaatttagttgatatgtccaga--tttattacttttatctttaacttttatcgtt 46596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 11999724 - 11999878
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  || || |||||||| |||| |||||||||||||||||||||  || |||||||| ||  ||    
T  11999724 caaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttcatccgcaaaaaaatatttc 11999823  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | ||||| |||||||||||| || |||| |||||    
T  11999824 aaaatttgatttatatgtccaga-ttttagtacttttatctttaatttttatcgtt 11999878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 12897410 - 12897229
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| |||||  | ||||| ||||||||||||||| | ||||| | ||| | ||| ||| ||  ||||| | | || ||||||||||    
T  12897410 ttatgcactcagttttagtccctatt-aaatctaaatttgtttaattaagcttaaacttttaagattttgaataatcttttgcacaagtgttaagaacat 12897312  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||  ||||||  ||| |||||||||| |||||| ||| |||||| |||||| |||||| |||||||||| |||||||||||||    
T  12897311 tacgtaaagttcatctccaaaaaattatctcaaatttt-atttctgcgtccaaatttttgttacttttattttgaacttttgtc 12897229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 19791245 - 19791399
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | | |||| |||||||||||||||||||||  ||| |||||||||  | |    
T  19791245 caaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttcatctacaaaaaattgtcgc 19791344  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| |||| |  ||| ||| ||||||||| |||||||||||||    
T  19791345 aaaatttgatttctacctcca-aaatttgttaattttatctttaacttttgtcgtt 19791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 26020688 - 26020534
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||||| ||  ||||| |||||| |||||| | |||| ||||||||||||||||||| | |||| || ||||||  | |    
T  26020688 caaatttgtttaatttatgcttaaaatcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagctcctctacataaaattgtcgc 26020589  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||| || | |||| ||| ||||||||| || ||||| ||||    
T  26020588 aaaatttgatttctacgttcaga-ttttgttaattttatctttaaattttgccgtt 26020534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 51561636 - 51561510
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    |||||||||||| || ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| || |||||||||||  | |    
T  51561636 caaatttgtttactttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaaattgtcgc 51561537  T
Q  201 aaaatttgatttctacgtccatatttt 227  Q
    |||||||||||||||||| || |||||    
T  51561536 aaaatttgatttctacgttcaaatttt 51561510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 25351957 - 25352111
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || |||| |||||||| |||||||  ||| ||||||||||    
T  25351957 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagttcatctccaaaaaatta 25352056  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||  ||||| |||| | |||||| |||||| |||||||||| || ||||||||||    
T  25352057 tctc--aattttatttatgcgtccagatttttgttacttttattttcaacttttgtc 25352111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 23176061 - 23176144
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||| ||||||||  || ||||||||||||||||||||||||||| || ||||| |||||| ||| |||||||||||| |||||    
T  23176061 attattaaaagttcatccgcaaaaaattagctcaaaatttgatttttaagtccaaatttttgttagttttatcttgaaattttg 23176144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 35530838 - 35530940
Alignment:
Q  147 ttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaac 246  Q
    ||||||| |||| ||||||||||||||||||||| | |||||||||| |    |||||||||||||||||||||| | |||| ||| ||||||||| |||    
T  35530838 ttttgtagacgtgttaagaacattactaaaagttcccctgcaaaaaaatgttgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaac 35530936  T
Q  247 tttt 250  Q
    ||||    
T  35530937 tttt 35530940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 28701020 - 28701115
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||||||| |||||| |||||||    |||||||||||||| ||||||| | |||| ||| ||||||||| |||||||||||||    
T  28701020 ttaagaatattactaaaagttcctctgcgaaaaattgtagcaaaatttgatttccacgtccaga-ttttgttaattttatctttaacttttgtcgtt 28701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 45127839 - 45127942
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||| |||| |||| |||||||||   ||||||| ||| |||||||||||||||||||||||||| || ||| | ||||| |||||||| ||||||||    
T  45127839 tttttgcatacttatttagaacattatataaagtttatctacaaaaaattagctcaaaatttgatttttatgtcta-attttcattactttaatcttgaa 45127937  T
Q  246 ctttt 250  Q
     ||||    
T  45127938 atttt 45127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 39681883 - 39681953
Alignment:
Q  185 tgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| | ||||||||||||||||| |||| | |||||||||||||||||| ||||||| |||||    
T  39681883 tgcaaaaaattatcgcaaaatttgatttctacatccaga-ttttattacttttatctttaacttttatcgtt 39681953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 1297157 - 1297017
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    |||| |||||||||||||||||||||||| | |||  |||| ||| || ||||||   |  |||||| ||||||||||| ||||  ||  || | |||||    
T  1297157 aaattcaaatttgtttaattatgtttaaactcttaaatttttgaataattttttgctaaaatattaa-aacattactaagagttcatcctcatataatta 1297059  T
Q  197 gctcaaaatttgatttctacgtccatatttttattactttta 238  Q
     |||||||||||||||||||||||| |||||| ||| |||||    
T  1297058 tctcaaaatttgatttctacgtccaaatttttgttaatttta 1297017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 5430767 - 5430698
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||| ||||||||||||||||||||||||| ||||| || |||||| | |||| |||| |||||    
T  5430767 caaaaaattatctcaaaatttgatttctacgtccatttttttgttgcttttaacatgaatttttatcgtt 5430698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 6216668 - 6216517
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactt-tttgtatacgtattaagaacattactaaaagtttctctgcaaaaaa--ttagct 199  Q
    ||||||||||||||||| ||||| | ||| ||||| || ||| || |||| | || | |||||||||||||||||   | ||| ||||||||  ||| ||    
T  6216668 aaatttgtttaattatggttaaactcttaggtttttga-caatttgtttgcaaacttgttaagaacattactaaacaatcctccgcaaaaaaaattatct 6216570  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||||||||||||||||||||   |||||| ||  |||||||||||||||||||    
T  6216569 caaaatttgatttctacgtctgaatttttgttgtttttatcttgaacttttgt 6216517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 48218211 - 48218040
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||||||||||||| |||        | || || ||| ||||| ||||| || ||||| ||||||||||||||||| ||||| |    
T  48218211 cttacttaattttaatagtgtttttagtccatataaaaaaact-atccattcaattttagtccctact-aaatctaaatttgtttaattatgcttaaact 48218114  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
     | | | ||| |||||| |||||| | | || ||||||||||||| |||||||  |||||||||||||| ||||    
T  48218113 ttaaagattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaaattatctca 48218040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 52881633 - 52881745
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||| ||| || ||||||||||||| |||||||  | | | |||| | | |||||||||| ||||| ||||||| |||||| ||||||||||    
T  52881633 aacaattttttgcataagtgttaagaacattacgaaaagttcatttaccaaaagt-atctcaaaattttatttcgacgtccagatttttgttacttttat 52881731  T
Q  240 cttgaacttttgtc 253  Q
     |||||||||||||    
T  52881732 tttgaacttttgtc 52881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 37710962 - 37710898
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||| || ||||||| |||||| || |||||||||||||||||||||||||| || |||||    
T  37710962 caaaaaatgagttcaaaatatgatttttaggtccatatttttattacttttatcttaaatttttg 37710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 48410250 - 48410302
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||| |||| |||||||| |||||| ||||||||||||||||||||||||    
T  48410250 aaaatttaatttatacgtccagatttttgttacttttatcttgaacttttgtc 48410302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 10041529 - 10041375
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  |||||  ||||| ||||| ||   || ||||  ||||||||||||||| |||| | |||||||  | |    
T  10041529 caaatttgtttaatttatgtttaaattcttgagtttttaaacaattttttataggtgtgttaaacacattactaaaagttcctcttcgaaaaattgtcgc 10041430  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| |||||||||| || | |||||||| ||||||||| |||||||| ||||    
T  10041429 aaaatttaatttctacgttcaga-ttttattaattttatctttaacttttgccgtt 10041375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 21091057 - 21091205
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    |||||||||||| || ||||||||| | ||| |||||  ||||| |||||||| |||| ||| |||||||||  ||||||  ||  ||| |||||| |||    
T  21091057 caaatttgtttagtttatgtttaaactcttaagtttta-aacaattttttgtagacgtgttacgaacattacataaagttcatccacaataaattatctc 21091155  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||| || || || | |||||||||||| ||||| ||||||||    
T  21091156 aaaatttgatttatatgttcaga-ttttattactttaatctttaacttttg 21091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 21794416 - 21794510
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatt 195  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| |||||||||||| |||||||| |||| |||||||||    
T  21794416 caaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcacacgtgttaagaacattaataaaagttcctctacaaaaaatt 21794510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 48468428 - 48468275
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttct-ctgcaaaaaattagctca 201  Q
    ||||||||||||||||| ||||||| |||  ||||  || || |||||  |||| | |||| ||||||| |||||| |||| |  ||| |||||||||||    
T  48468428 aaatttgtttaattatgcttaaaattttaaattttttaataattttttacatacttgttaaaaacatta-taaaaggttctgccacaataaattagctca 48468330  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  48468329 aaattttatttttatgtccaaattttcgttagttttatcttgaatttttggcgtt 48468275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 17964103 - 17964168
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| ||||| ||||    
T  17964103 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttggcgtt 17964168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 31861731 - 31861666
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || |||||||||||  ||| |||||||||||| ||||| ||||    
T  31861731 aaattagctcaaaattttatttttaggtccatattttcgttaattttatcttgaatttttggcgtt 31861666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 36796024 - 36796089
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  |||||||||||||||| ||||| ||||    
T  36796024 aaattagctcaaaattttatttttaggtccaaattttcgttacttttatcttgaatttttggcgtt 36796089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 26507598 - 26507658
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| |||||    
T  26507598 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttg 26507658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 29972657 - 29972572
Alignment:
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgttnnnnnnnttcatatttaattcatct 281  Q
    ||||||||| |||||| ||| ||||| ||||| |||||||| || ||||||||||| ||||       ||||||||||||||||||    
T  29972657 agctcaaaaattgattactaggtccagattttcattactttcatattgaacttttggcgtttaaaacattcatatttaattcatct 29972572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 35188250 - 35188330
Alignment:
Q  173 taaaagtttctctgcaaaaaattagctcaaaa-tttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||||||| ||| |||||||| || | ||||| |||||||||||| |  |||||||| ||||||||||||| |||||||||    
T  35188250 taaaagttcctcagcaaaaaaatatcgcaaaaatttgatttctacatttatatttttgttacttttatcttaaacttttgt 35188330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 40990422 - 40990478
Alignment:
Q  198 ctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    ||||||| ||| ||||||  || ||| ||||||||||||||||||||||||||||||    
T  40990422 ctcaaaacttggtttctagatctatacttttattacttttatcttgaacttttgtcg 40990478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15053646 - 15053725
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  15053646 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 15053725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 15053732 - 15053781
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  15053732 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 15053781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 31267071 - 31267017
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| ||||||||||||    
T  31267071 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaa 31267017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 51841323 - 51841222
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | |  ||||||||||    
T  51841323 ttatgcactcagttttagtccctgct-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagagttaagaacat 51841225  T
Q  170 tac 172  Q
    |||    
T  51841224 tac 51841222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 4647173 - 4647238
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  4647173 aaattagctcaaaattttatttttaggtgcaaatttttgttagttttatcttgaatttttggcgtt 4647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 10371691 - 10371626
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||| ||| ||||| ||||    
T  10371691 aaattagctcaaaattttatttttaggtccaaatttttcttagttttatctcgaatttttggcgtt 10371626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 10895735 - 10895792
Alignment:
Q  194 ttagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||| |||| || ||||| |||||| ||| |||||||||||| |||||    
T  10895735 ttagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttg 10895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 13083424 - 13083528
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||||||| |||||  | |||| |||| ||||||||||||| ||| | | | | ||||| ||||||||||||  | | || |||||||||||||||    
T  13083424 cactcagttttagtccctagt-aaattcaaacttgtttaattatgcttatactctcaagtttttgaacaacttttttcagatgtgttaagaacattacta 13083522  T
Q  175 aaagtt 180  Q
    ||||||    
T  13083523 aaagtt 13083528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 14007034 - 14007099
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  14007034 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 14007099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 34076166 - 34076101
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  34076166 aaattagctcaaaattttatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 34076101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 43030289 - 43030354
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||| ||||||||||||||||| |||| ||  |||| |||||| ||| |||||||||||| |||||    
T  43030289 gcaataaattagctcaaaattttatttttagatccaaatttttgttagttttatcttgaatttttg 43030354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 45194455 - 45194520
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||| ||||||||||||||||| |||| |  ||||| ||||| |||| |||||||||||| |||||    
T  45194455 gcaataaattagctcaaaattttatttttgggtccaaattttcattagttttatcttgaatttttg 45194520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 47632761 - 47632696
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  47632761 aaattagctcaaaattttatttttaggtccaaattttcgttaattttatcttgaatttttggcgtt 47632696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 48624372 - 48624307
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  48624372 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 48624307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 48723516 - 48723581
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  48723516 aaattagctcaaaattttatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 48723581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 52009931 - 52010017
Alignment:
Q  162 aagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||| |||||||  ||| |||||||||| |||  ||||| |||| ||| || | |||||| |||||||||| ||||||||||    
T  52009931 aagaacattacgaaaagttcatctccaaaaaattatctc--aattttatttttacatcgagatttttgttacttttattttgaactttt 52010017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 4008917 - 4008857
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  4008917 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 4008857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 12896872 - 12896908
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtcc 57  Q
    |||||| |||| |||||||||||||||||||||||||    
T  12896872 tttaattcttacttaattttaatagtgtttttagtcc 12896908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 14744048 - 14743988
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| ||||||| ||||| |||||  ||| ||||||||| || |||||    
T  14744048 aaattagctcaaaattttatttctaggtccaaattttcgttagttttatcttcaatttttg 14743988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 26451172 - 26451232
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  26451172 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 26451232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 27551789 - 27551705
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagttt 181  Q
    ||||| ||||||||| ||||||| ||||| | ||| | ||| |||||| |||||| | | ||||||||||||| || ||||||||    
T  27551789 aaatctaaatttgttaaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagttt 27551705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 37986944 - 37986904
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  37986944 aacaattttttgtagacgtgttaagaacattactaaaagtt 37986904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 48410100 - 48410218
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaa-atattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||||||| ||||| || ||||  ||||||||||||||||| |||||  | ||| | ||| |||||| |||||| | | || ||||||||||||||    
T  48410100 cactcagttttagtccctact-aaatataaatttgtttaattatgcttaaactttttaagattttgaacaattttttgcagaagtgttaagaacattact 48410198  T
Q  174 aaaagtttctctgcaaaaaatta 196  Q
    ||||   | ||||||||||||||    
T  48410199 aaaa---tttctgcaaaaaatta 48410218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 288932 - 289155
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||||||||||||| |||        |||| |||||||||||| ||||| || ||||| ||||||||||||||||| |||||      
T  288932 cttacttaattttaatagtgtttttagtccatataaaaaaa-ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaaca 289029  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| |||| ||  |||||||||||||| |||||||||| |||||| |||||| |||||    
T  289030 tttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaacttcatctgcaaaaaattatctcaaaattttatttctgcgtccagatttt 289129  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | |||||||||| |||||||||||||    
T  289130 tgttacttttattttgaacttttgtc 289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 253
Target Start/End: Complemental strand, 289671 - 289496
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaa 177  Q
    ||||||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || |||||||||| |  ||||    
T  289671 tcagttttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaa 289573  T
Q  178 gtttctctgcaaaaaattagctcaaaatttgatttctacgtccata-tttttattacttttatcttgaacttttgtc 253  Q
    |||| |||||||||||||| || ||||||| ||||||||||||| | ||||| |||||||||| |||||||||||||    
T  289572 gtttatctgcaaaaaattatcttaaaattttatttctacgtccagattttttgttacttttattttgaacttttgtc 289496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 3914741 - 3914560
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||||| || ||||| ||||||||||||||||||||||| | ||| | ||| ||| || |||||| | | || ||||||||||    
T  3914741 ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgtttaaacttttaagattttgaataa-tttttgcacaagtgttaagaacat 3914644  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| ||| |||  |||||||||||||| |||||||||| ||||||||||| | |||| | ||| |||||| |||||||||||||    
T  3914643 tacaaaatgttcatctgcaaaaaattatctcaaaattttatttctacgtctagatttctgttagttttattttgaacttttgtc 3914560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 21108387 - 21108205
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  21108387 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 21108289  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||| ||  ||| ||||||| || |||||||||| |||||| |||||| |||||| |||||||||| |||||||||||||    
T  21108288 tacgaaaatttcatctccaaaaaaatatctcaaaattttatttctgcgtccagatttttgttacttttattttgaacttttgtc 21108205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 256
Target Start/End: Original strand, 3375265 - 3375450
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||| ||| ||||| || ||||| ||||||||||||||||  ||||||| ||| | ||| |||  | |||||||| | || ||||||||||    
T  3375265 ttatgcactcagtattagtccctact-aaatctaaatttgtttaattatacttaaaattttaagattttgaaggattttttgtaaaagtgttaagaacat 3375363  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| ||| ||   ||||||||||||| |||||||||| |||||||||| || ||||||  || |||||||||||||||||||||||    
T  3375364 tacttaaatttcacctgcaaaaaattatctcaaaattttatttctacgttcagatttttgataattttatcttgaacttttgtcgtt 3375450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 5079822 - 5079642
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||| ||| ||| ||||||||||| || |||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||    
T  5079822 cacttagtattagtcccttctcaattc-aaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattact 5079724  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||| ||||||| |||   ||||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  5079723 aaaagttcctccgcaaaaagttattgcaaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 5079642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 17467719 - 17467622
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||| |||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||||  |||||||||||||||||||    
T  17467719 acgtgttaaaaacgttactaaaagtttctctgcaaaaaattatctcaaaatttggtttctacgttcaaatttttattgtttttatcttgaacttttgt 17467622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 1821019 - 1821113
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||  | |||||||||||||||||||||| |||||    
T  1821019 gtttttgaacaattttttgcatacgtattaagaacattactaaaagttcctctgcaaaaagttgtcacaaaatttgatttctacgtccaaatttt 1821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 15721380 - 15721200
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| |||| ||| |||||    
T  15721380 cactcagtattaatccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaactttact 15721282  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| || |||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  15721281 aaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 15721200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 844126 - 844227
Alignment:
Q  115 ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttct 214  Q
    ||||||||||| | ||| ||||| ||||||||||||| | || |||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  844126 ttatgtttaaactcttaagtttttgaacaactttttgcagacatatttagaacattactaaaagttcctctgcaaaaaattatcgcaaaatttgatttct 844225  T
Q  215 ac 216  Q
    ||    
T  844226 ac 844227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 26356508 - 26356691
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgt---atacgtattaagaacatt 170  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| ||||| |   |  ||| |||||||||||    
T  26356508 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttttacacgcgtgttaagaacatt 26356606  T
Q  171 actaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||| |||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||| ||||    
T  26356607 actaaaagtttctatgcaaaaaattgtcacaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgccgtt 26356691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 861629 - 861493
Alignment:
Q  120 tttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtc 219  Q
    |||||| | ||| ||||| |||||| |||||| | || |||| |||||||||||||||||| ||| ||||||||||| | ||||||||||||||||| ||    
T  861629 tttaaactcttaagtttttgaacaattttttgcagacatatttagaacattactaaaagttcctcggcaaaaaattatcgcaaaatttgatttctacatc 861530  T
Q  220 catatttttattac-ttttatcttgaacttttgtcgtt 256  Q
    || | |||| |||| ||||||||| |||||||||||||    
T  861529 caga-ttttgttactttttatctttaacttttgtcgtt 861493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 938850 - 939001
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| ||||||||||||||||||||| ||| |||| |||||| | |    
T  938850 caaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaaacgtgttaagaacattactaaaagttcctccgcaataaattatcgc 938949  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||| ||||||||||| |  ||| || |||||||||| ||||||||||    
T  938950 aaaatttgaattctacgtccaga-ctttgttgcttttatctttaacttttgtc 939001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 22732236 - 22732134
Alignment:
Q  153 atacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||| ||| |  ||| ||| ||||||||| ||| |||||    
T  22732236 atacgtattaagaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacggccaga-ctttgttaattttatctttaacatttgt 22732138  T
Q  253 cgtt 256  Q
    ||||    
T  22732137 cgtt 22732134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 29692200 - 29692046
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| |||||||| |||| ||||  | ||||| ||||||| ||||||||||||||  | |    
T  29692200 caaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttgtagacgtgttaaacatattacaaaaagttcctctgcaaaaaattctcac 29692101  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||| ||||||||| |||| |||||| |||||| |||||||||||||    
T  29692100 aaaatttgatttcaacgtccata-ttttgttacttatatctttaacttttgtcgtt 29692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 33518613 - 33518491
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| | |||| |||| ||||||||||||||||  |||||||||||||  | |||||||||||||||||||||| | |||| |||    
T  33518613 gtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgcaaaaaattgtcacaaaatttgatttctacgtcca-aattttgtta 33518515  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| |||||||| ||||    
T  33518514 attttatctttaacttttgccgtt 33518491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 5974597 - 5974450
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| |||| |||||||||||||||| |||| |||||||||  | ||    
T  5974597 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcctctacaaaaaattgtcgca 5974498  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||||| |||| | |||| ||| ||||||||| |||||||    
T  5974497 aaatttgatttctacatcca-aattttgttaattttatctttaactttt 5974450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 8709843 - 8709989
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| ||||||| ||||||||||||| |||| |||||||||  | ||    
T  8709843 aaatttgtttaatttatgcttaaactcttgagtttt-gaacaattttttgcagacgtgttaagaatattactaaaagttcctctacaaaaaattgtcgca 8709941  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||||||||||| | |||| ||| ||||||||| |||||||    
T  8709942 aaatttgatttctacgtcca-aattttgttaattttatctttaactttt 8709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 33744956 - 33744797
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  |||||  ||||  | |||| |||||||| ||| |||||| | ||| | ||||||| |    
T  33744956 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaatgttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatat 33744857  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     ||  ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33744856 cgc-aaaaatttgatttctacgtccatatttttattacttatatcttaaacttttgtcgtt 33744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 2087444 - 2087597
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| ||||| |||||| |||||  | || | |||||||||||||||||||||  |||||||||||||  |      
T  2087444 caaatttgtttaatttatgcttaaactctta-gtttttgaacaaatttttacagacatgttaagaacattactaaaagttcatctgcaaaaaattgtcat 2087542  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| ||||||| |||||    
T  2087543 aaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttatcgtt 2087597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 30660785 - 30660938
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | || | ||||||| |||||||||||||  |||||||||||||  | ||    
T  30660785 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacatgttaagaatattactaaaagttcatctgcaaaaaattgtcgca 30660884  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||| |||| | |||| ||| ||||||| | |||||||||||||    
T  30660885 aaatttgatttctacatccaga-ttttgttaattttatcattaacttttgtcgtt 30660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 20510544 - 20510639
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| |||| |||||||||  |  ||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  20510544 ttaagaacattactaaaagttcctctacaaaaaattgtcgtaaaatttaatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 20510639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 28476479 - 28476326
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttg-tatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    |||||||||||||| ||||||||| | ||  |||||  ||||| |||||| || | |||||||  | ||||||||| ||||||||| ||||||||  | |    
T  28476479 aaatttgtttaatttatgtttaaacttttgagtttttcaacaattttttggtagatgtattaaacatattactaaatgtttctctg-aaaaaattgtcac 28476381  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||| ||||||||| |||| |||||| |||||| |||||||||||||    
T  28476380 aaaatttgatttcaacgtccata-ttttgttacttatatctttaacttttgtcgtt 28476326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 5087446 - 5087325
Alignment:
Q  134 ttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattac 233  Q
    |||| |||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||  | ||||| || |||| ||| | || | |||| |||     
T  5087446 tttttgaacaattttttgtagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgcaaaaattaatttttacattcaga-ttttgttaa 5087348  T
Q  234 ttttatcttgaacttttgtcgtt 256  Q
    ||||||||| |||||||| ||||    
T  5087347 ttttatctttaacttttgccgtt 5087325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 10915281 - 10915463
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgt--atacgtattaagaacatta 171  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||  ||||| |||||| ||||| |  | |||| ||||||||||||    
T  10915281 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttttgcagacgtgttaagaacatta 10915379  T
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| | || | |||||||||  | || ||||||||||||||||||||| |||| ||| ||||||||| ||| ||| |||||    
T  10915380 ctaaaaggtcctttacaaaaaattgtcgcataatttgatttctacgtccata-ttttgttaattttatctttaacatttttcgtt 10915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 14256374 - 14256307
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    |||| |||||||||||||||| ||||||||||||||  | |||||||||||||| ||||||| |||||    
T  14256374 ttaaaaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttcaacgtccaaatttt 14256307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 17697643 - 17697521
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| | |||| ||||||||||||| ||||| | || | || ||||||  |  ||||||||||||||||||||| | |||| |||    
T  17697643 gtttttgaacaattttttgaagacgtgttaagaacattacaaaaagctccttttcataaaattgtcgtaaaatttgatttctacgtccaga-ttttgtta 17697545  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| |||||||||||||    
T  17697544 attttatctttaacttttgtcgtt 17697521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 30492770 - 30492863
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||| ||||||||||||||||||||| |||||| |||||||  | |||||||| ||||||||||||| |||||  ||| ||||||||| |||||||    
T  30492770 acgtgttaagaacattactaaaagttcctctgctaaaaattgtcgcaaaattt-atttctacgtccagattttgttta-ttttatctttaactttt 30492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 20898269 - 20898143
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||| ||||||| ||| ||||| | ||| ||||| |||||| |||||  | || | |||||||||||||||||| || ||| | ||||||  | | |    
T  20898269 caaatttttttaatttatgcttaaactcttaagtttttgaacaatttttttaagacttcttaagaacattactaaaacttcctccgaaaaaaaaaatcac 20898170  T
Q  201 aaaatttgatttctacgtccatatttt 227  Q
    ||||||||||||||||||||| |||||    
T  20898169 aaaatttgatttctacgtccaaatttt 20898143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 15053896 - 15053956
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| |||||    
T  15053896 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttg 15053956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 30916935 - 30916860
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactt 235  Q
    ||||||| ||||||||||||| ||||||||| || ||||| ||||||| |||| || ||| | |||||| ||||||    
T  30916935 ttaagaatattactaaaagttactctgcaaacaaatagcttaaaatttaatttttatgtcaagatttttgttactt 30916860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 18503182 - 18503133
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  18503182 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 18503133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 20510133 - 20510063
Alignment:
Q  186 gcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| ||||||||||||||||| |||| ||  |||| ||||| |||| |||||||||||| ||||| ||||    
T  20510133 gcaataaattagctcaaaattttatttttagatccaaattttcattatttttatcttgaatttttgacgtt 20510063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 12783548 - 12783483
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  12783548 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 12783483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 13400266 - 13400331
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  13400266 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 13400331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 16270277 - 16270342
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  16270277 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 16270342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 19693260 - 19693195
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  19693260 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 19693195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 33971523 - 33971458
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| ||||||||| || ||||| ||||    
T  33971523 aaattagctcaaaattttatttttaggtccaaattttcattagttttatcttcaatttttggcgtt 33971458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 8235379 - 8235315
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||  |||| ||||||||||||||| || |  |||||  ||||||||||||||||||||||    
T  8235379 caaaaaacaagcttaaaatttgatttctatgttctgattttgtttacttttatcttgaacttttg 8235315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 18503229 - 18503189
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  18503229 aacaattttttgtagacgtgttaagaacattactaaaagtt 18503189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 32243611 - 32243834
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| || || || ||||| ||||||||||||||||| ||||| |    
T  32243611 cttacttaattataatagtgtttttagtccatataaaacaa-ttatgcactcagttttagtctctgct-aaatctaaatttgtttaattatgcttaaact 32243708  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | ||||||||||||| || |||||||| |||||||||||||| |||||||||| ||| || |||| | |||||    
T  32243709 tttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgcaaaaaattatctcaaaattttattcctgcgtctagatttt 32243808  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | |||||||||| |||||||||||||    
T  32243809 ttttacttttattttgaacttttgtc 32243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 21135327 - 21135481
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  21135327 caaatttgtttaatttatgtttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 21135426  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  21135427 aaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 21135481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 3865692 - 3865848
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | ||||||||||||| || |||||||| ||| ||||||||||    
T  3865692 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctccaaaaaatta 3865791  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||| ||| || |||||| |||||| |||||||||| |||||||||||||    
T  3865792 tctcaaaattttattcctgcgtccagatttttgttacttttattttgaacttttgtc 3865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 24451488 - 24451642
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| ||| |||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  24451488 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 24451587  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  24451588 aaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 24451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 6243447 - 6243625
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| | |||  |||| |||||| |||||| | | || |||  |||||    
T  6243447 ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaaatttt-gaacaaatttttgcacaagtgttagtaacat 6243544  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||| |||||||  || ||||||||||| |||||||||| |||||| | ||||||||||| |||||||||| ||||||||||    
T  6243545 tacgaaaagttcatccgcaaaaaattatctcaaaatttaatttctgcatccatatttttgttacttttattttgaactttt 6243625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 18840173 - 18840051
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||||| | || ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||| ||||| | ||||||||    
T  18840173 gtttttgaacaattttttgtacatgtgttaagaacattactagaagttcctctgcaaaaaattatcgcaaaatttgatttctatgtccaga-ttttatta 18840075  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
    |||||||||| |||| || |||||    
T  18840074 cttttatctttaactcttttcgtt 18840051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 253
Target Start/End: Complemental strand, 32244685 - 32244535
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||||    
T  32244685 aaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctcaa 32244586  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||| |||| | |||||| | |||| |||||||||| |||||||||||||    
T  32244585 aattttatttatgcgtccagaattttgttacttttattttgaacttttgtc 32244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 37707009 - 37706856
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||| ||||| ||| ||||| | |||||||||  ||||| |||||||| ||||||| |||||||||||||||||| ||| ||||||||||| | ||    
T  37707009 aaatttgtgtaatttatgcttaaactcttatgttttttaacaattttttgtagacgtattgagaacattactaaaagttcctccgcaaaaaattatcgca 37706910  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| || || || | |||||| ||||||||||| ||||||| |||||    
T  37706909 aaatttgatttatatgttcaga-ttttatcacttttatctttaacttttatcgtt 37706856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 253
Target Start/End: Complemental strand, 43623081 - 43622929
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | | |||| |||| |||||||||||||||| |||| |||||||||  | |    
T  43623081 caaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaaaaacattactaaaagttcctcttcaaaaaattgtcgc 43622982  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||||||||||||| |||  ||| ||||||||| ||||||||||    
T  43622981 aaaatttgatttctacgtccataatttgtttaattttatctttaacttttgtc 43622929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 44894771 - 44894568
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||| ||||||||| |||        |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| |    
T  44894771 cttacttaattttaatagtgcttttagtccatataaaaaaa-ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaact 44894674  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||||||||| |||||| |||||| |||||    
T  44894673 tttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctcaaaattttatttctgcgtccagatttt 44894574  T
Q  228 tattac 233  Q
    | ||||    
T  44894573 tgttac 44894568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 8784582 - 8784728
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| ||||||   |||| ||||||||||||||||||||||||||||||||||||  | |    
T  8784582 caaatttgtttaatttatgcttaaactcttgagtttttaaacaagtttttgctgacgtgttaagaacattactaaaagtttctctgcaaaaaattgtcgc 8784681  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactt 248  Q
    |||||||||||||||||| || | |||||||| ||||||||| |||||    
T  8784682 aaaatttgatttctacgttcaga-ttttattaattttatctttaactt 8784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 17498781 - 17498627
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | || ||| ||||| ||||||||||||| ||||||||||||||  | |    
T  17498781 caaatttgtttaatttatgcttaaacttttgagtttttgaacaattttttgcagacatataaagaaaattactaaaagttcctctgcaaaaaattgtcgc 17498682  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||| || | |||| ||| ||||||||| |||||||||||||    
T  17498681 aaaatttgatttctacgttca-aattttgttaattttatctttaacttttgtcgtt 17498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 35369194 - 35369348
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| || || | ||| |||||  ||||| |||||||| |||| |||| |||||||||||||||| ||| |||||||||||   |    
T  35369194 caaatttgtttaatttatgcttcaactcttaagttttttaacaattttttgtagacgtgttaacaacattactaaaagttactccgcaaaaaattattgc 35369293  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  35369294 aaaatttgatttatatgtcca-aattttattacttttatctttaacttttatcgtt 35369348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 42499663 - 42499513
Alignment:
Q  106 tttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaa 204  Q
    ||||||||||| |||  |||| ||||| ||||| |||||| |||||| | |||||||||||||||||||||||| || | |||||||||||  | |||||    
T  42499663 tttgtttaatttatgcataaactattaagtttttgaacaattttttgcagacgtattaagaacattactaaaagcttatatgcaaaaaattgtcgcaaaa 42499564  T
Q  205 tttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||| |||| |||||||||||| || ||| || |||||| |||||||||||||    
T  42499563 tttaatttttacgtccatattgtt-ttaattgtatctttaacttttgtcgtt 42499513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 25102275 - 25102095
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | |   ||||| |||||| |||||  | |||| ||||||||||||||    
T  25102275 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactctcgagtttttgaacaattttttacagacgtgttaagaacattact 25102177  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| || |||||||||||  | |||||||||||||||||||||| | |||| ||| |||||| || |||||||| ||||    
T  25102176 aaaagttcctatgcaaaaaattgtcacaaaatttgatttctacgtccaga-ttttgttaattttatttttaacttttgccgtt 25102095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 36063712 - 36063572
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaacttttt--gtatacgtattaagaacattactaaaagtttctctgcaaaaaattagc 198  Q
    ||||||||||||||| ||||||||| | ||| |||||  ||||| |||||  ||| |||| ||||||||||||||||||||| ||| ||||||||||| |    
T  36063712 caaatttgtttaatttatgtttaaattcttaagttttttaacaattttttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 36063613  T
Q  199 tcaaaatttgatttctacgtccatatttttattacttttatc 240  Q
     ||||||||||||| || ||||| | ||||||||||||||||    
T  36063612 gcaaaatttgatttatatgtccaga-ttttattacttttatc 36063572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 253
Target Start/End: Complemental strand, 42024559 - 42024387
Alignment:
Q  79 cagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaag 178  Q
    |||||||| ||||| || ||||| |||||||||||||||| |||||| | |||   |||  ||||| |||||| | | || ||||||||||||||||||     
T  42024559 cagttttagtccctact-aaatctaaatttgtttaattatatttaaatttttaatattttaaacaattttttgcagaagtgttaagaacattactaaaat 42024461  T
Q  179 tttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||  ||||||| |||  | |||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  42024460 ttcatctgcaagaaaa-atctcaaaattttatttctacgtcgagatttttgttacttttatcttgaacttttgtc 42024387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 9252620 - 9252799
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaaca 168  Q
    |||| |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | | |||| |||||||||    
T  9252620 ttatgcactcagtgttagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaaca 9252718  T
Q  169 ttactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||| || |||||||||||  | ||||||||||||||||| |||| | |||| ||| ||||||||| |||||||    
T  9252719 ttactaaaagttcctttgcaaaaaattgccgcaaaatttgatttctacttccaga-ttttgttaattttatctttaactttt 9252799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 10409789 - 10409938
Alignment:
Q  106 tttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-tagctcaaaa 204  Q
    |||||||||||||||||||| | ||| | ||| |||||| || |||   | || |||||||||||||||||||||  |||||||||||  || || |||     
T  10409789 tttgtttaattatgtttaaacttttaagattttgaacaatttcttgcggaagtgttaagaacattactaaaagttcatctgcaaaaaaaatatctgaaat 10409888  T
Q  205 tttg-atttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  10409889 tttttatttctacgtccatatttttgttacttttatcttgaacttttgtc 10409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 35863045 - 35863193
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||| ||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||| ||||| ||||||||||    |    
T  35863045 caaatttatttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagattctccgcaaaaaattgttgc 35863144  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||| || ||||| | |||||||||||||||||| |||||||    
T  35863145 aaaatttgatttatatgtccaga-ttttattacttttatctttaactttt 35863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 44265453 - 44265578
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||||||||| | ||  ||||| |||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||    ||    
T  44265453 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaaattgttgca 44265552  T
Q  202 aaatttgatttctacgtccatatttt 227  Q
    |||||||||||||| ||||| |||||    
T  44265553 aaatttgatttctaagtccagatttt 44265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 30658806 - 30658572
Alignment:
Q  18 aaatttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaatta 117  Q
    ||||||||| |||| |||||||||||||| |||||||| |||          |||| |||||||| ||| || || ||||| || |||||||||||||||    
T  30658806 aaatttaattcttacttaattttaatagtttttttagttctt--caaaaaaattatgcactcagtattaatctctcctcaattc-aaatttgtttaatta 30658710  T
Q  118 tgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagct-caaaatttgatttctac 216  Q
    || ||||  | ||  |||||  ||||| |||||| | |||||||||||||||||||||||||| |||| |||||||   | | |||||||||||||||||    
T  30658709 tgcttaac-tcttgagtttttaaacaattttttgcagacgtattaagaacattactaaaagttcctcttcaaaaaaaatgttgcaaaatttgatttctac 30658611  T
Q  217 gtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||| | |||| ||| ||||||||| |||||||||||||    
T  30658610 gtccaga-ttttgttaattttatctttaacttttgtcgtt 30658572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 38706730 - 38706576
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| |||||||| |||||||||||   | |||||||||||  | |    
T  38706730 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtgcttgtgcaaaaaattgtcgc 38706631  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  38706630 aaaatttgatttctacgtcca-aattttgttaattttatctttaacttttgtcgtt 38706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 6590269 - 6590383
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||  | |    
T  6590269 caaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttggagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgc 6590368  T
Q  201 aaaatttgatttcta 215  Q
    |||||||||||||||    
T  6590369 aaaatttgatttcta 6590383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 13323839 - 13323690
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact-aaaagtttctctgcaaaaaattagct 199  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||| ||||||| |||  |||||||||| |     
T  13323839 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaaagttcctccacaaaaaattatcg 13323740  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || || || | |||||||||||||||||| |||||||    
T  13323739 caaaatttgatttatatgttcaga-ttttattacttttatctttaactttt 13323690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 41281544 - 41281435
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | ||||||||||||| ||  |||| | ||| |||||||||||||| ||    
T  41281544 tttttgtagacgtcttaagaacattactaaaagttcctcagcaaaaaattatcgcaaaatttgatttatatatccaga-tttcattacttttatctttaa 41281446  T
Q  246 cttttgtcgtt 256  Q
    ||||| |||||    
T  41281445 cttttatcgtt 41281435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 256
Target Start/End: Complemental strand, 6413585 - 6413403
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacatta 171  Q
    |||||||||| ||| || || ||||| || |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| |||||||||| |    
T  6413585 tacactcagtattagtctctcctcaattc-aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacatca 6413487  T
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||| |||| |||||||||  | |||||||||||| |||| |||| | |||| ||| ||||||||| |||||||| ||||    
T  6413486 ctaaaagttcctcttcaaaaaattgtcgcaaaatttgattcctacatcca-aattttgttaattttatctttaacttttgccgtt 6413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 18304896 - 18304801
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||| | |||| ||  ||||||||| || ||||||||||    
T  18304896 ttaagaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtcca-aattttgttgattttatctttaaattttgtcgtt 18304801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 27875680 - 27875581
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| |||| |||||||||||||||| ||||||||||||||  |  ||||||||||||||||||||| |||||  ||| ||||||||| |||||||||||    
T  27875680 acgtgttaaaaacattactaaaagttcctctgcaaaaaattgtcgtaaaatttgatttctacgtccagattttgttta-ttttatctttaacttttgtcg 27875582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 28015861 - 28015762
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| |||| |||||||||||||||| ||||||||||||||  |  ||||||||||||||||||||| |||||  ||| ||||||||| |||||||||||    
T  28015861 acgtgttaaaaacattactaaaagttcctctgcaaaaaattgtcgtaaaatttgatttctacgtccagattttgttta-ttttatctttaacttttgtcg 28015763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 245
Target Start/End: Complemental strand, 2821296 - 2821135
Alignment:
Q  76 actcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaa 175  Q
    ||||||||||| ||| |||| ||||||||||||||||| ||||||||||| | |||  ||||        |||||||| | || ||||||| ||||||||    
T  2821296 actcagttttagtcctttct-aaatccaaatttgtttatttatgtttaaacttttaatttttt-------tttttgtagaagtgttaagaaaattactaa 2821205  T
Q  176 aagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    || || |||  ||||||||||| |||||||||||||||||| |  | |||||||||||||| ||||||||    
T  2821204 aaattcctccacaaaaaattagttcaaaatttgatttctacatttaaatttttattactttaatcttgaa 2821135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 17842469 - 17842622
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| ||||||||||| | |||| |||||||||| ||||   || ||||||||| | | |    
T  17842469 caaatttgtttaatttatacttaaactcttaagtttttcaacaattttttgtatacatgttaaaaacattactagaagtacatcagcaaaaaat-atcgc 17842567  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  17842568 aaattttgatttctacgtccagatttt-attacttttatctttaacttttgtcgtt 17842622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 33322569 - 33322691
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    |||||| ||||| |||||| | |||| |||| |||||||||||||||| ||||||||||||||  | ||||||||||||| |||||| | | |||| |||    
T  33322569 gttttcaaacaattttttgcagacgtgttaaaaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttttacgtctaga-ttttgtta 33322667  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| ||||||| |||||    
T  33322668 attttatctttaacttttttcgtt 33322691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 32514274 - 32514184
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||||||| ||||  |||||||||||||| || ||||||| || |||||||||| | |||| ||||||||||||| |||||||    
T  32514274 ttaagaacattactaatagttcatctgcaaaaaattatctgaaaattttatatctacgtccagaattttgttacttttatctttaactttt 32514184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 283
Target Start/End: Original strand, 27000778 - 27000963
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||||||||||||| |||||||   ||| | ||| |||||  |||||||| ||| | |||| ||||||||||   |||||| |||||  ||||||||||    
T  27000778 aaatccaaatttgttgaattatgcccaaattcttaagtttttcaacaacttgttgcagacgtcttaagaacatctgtaaaagattctccacaaaaaatta 27000877  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgttnnnnnnnttcatatttaattcatctca 283  Q
    | | |||||| |||||||||||||| |||||  | |||||||| |||||||||| |||||       ||||||||||||| ||||||    
T  27000878 gtttaaaatt-gatttctacgtccaaattttcgtgacttttatattgaacttttctcgtttaaaaaattcatatttaatttatctca 27000963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 251
Target Start/End: Complemental strand, 43988466 - 43988293
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||| ||| ||||| ||||| || ||||||||||||||||| ||||| | ||| |||||||||||   ||||| ||  || || ||||| ||||||    
T  43988466 cactcagtattagtccctactcaattc-aaatttgtttaattatgcttaaactcttaagttttcgaacattattttgcat--gtgtttagaacgttacta 43988370  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    | || | |||  ||||| |||| | ||||||||||||| ||| |||| |||||| ||||||||||||| ||||||||    
T  43988369 atagctcctccacaaaatattatcgcaaaatttgatttttacatccagatttttgttacttttatctttaacttttg 43988293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 3866712 - 3866529
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaa-tattatgttttcgaacaactttttgtatacgtattaagaaca 168  Q
    |||| |||||||||||| ||||| || ||||  ||||||||||||||||| |||||  | |||   ||| |||||| |||||| | | || ||||||| |    
T  3866712 ttatgcactcagttttagtccctact-aaatttaaatttgtttaattatgcttaaaccttttaaaattttgaacaattttttgcacaagtgttaagaata 3866614  T
Q  169 ttactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||| |||||||  | |||||||||||| |||||||||| ||||||  || || | |||| |||||||||| |||||||||||||    
T  3866613 ttacgaaaagttcatatgcaaaaaattatctcaaaattttatttctgtgttcagaattttgttacttttattttgaacttttgtc 3866529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 28755467 - 28755308
Alignment:
Q  98 aatccaaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaat-t 195  Q
    ||||||||||||||||| ||||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| | ||| | ||||||| |    
T  28755467 aatccaaatttgtttaatttatgcttaaattcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccgaaaaaaatat 28755368  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     ||  |||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||    
T  28755367 cgc-aaaaatttgatttctacgttcatatttttgttacttatatcttaaacttttgtcgtt 28755308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 36471112 - 36470965
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | | ||||||||||| |||| ||||||| || || ||||||||  | |    
T  36471112 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagatgtattaagaacgttaccaaaagttcctatgtaaaaaattgtcgc 36471013  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttt 249  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  36471012 aaaatttgatttctacgtcca-aattttgttaattttatctttaacttt 36470965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 37967600 - 37967687
Alignment:
Q  162 aagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||||||| || ||| ||||||||||  | |||||||||||||||||||||||| |||| ||| ||||||||| |||||||    
T  37967600 aagaacattactaaaacttcctccgcaaaaaattgtcgcaaaatttgatttctacgtccata-ttttgttaattttatctttaactttt 37967687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 5765904 - 5765849
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  5765904 aaaatttgatttctacgtccatatttttgttacttatatcttaaacttttgtcgtt 5765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 36018111 - 36018265
Alignment:
Q  98 aatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaa-att 195  Q
    ||||||||||||||| ||| ||| ||||| | ||| |||||  ||||| ||||| || |||| ||||||||  || |||||||||||| ||||||| |||    
T  36018111 aatccaaatttgtttcatttatgcttaaactcttaagtttttcaacaatttttt-tagacgtgttaagaacgctattaaaagtttctccgcaaaaacatt 36018209  T
Q  196 agctcaaaa-tttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    | | ||||| |||||||||||| | ||||||||| ||||||||||||| |||||||    
T  36018210 atcgcaaaaatttgatttctacattcatatttttgttacttttatcttaaactttt 36018265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 36909754 - 36909832
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||||| ||| | |||||||||| ||||||||||| || |||||||||||||||| |||| |||||| |||||||||    
T  36909754 ttaagaacgttatttaaagtttctccgcaaaaaattatcttaaaatttgatttctacctccaaatttttgttactttta 36909832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 41590587 - 41590505
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtcca 221  Q
    |||||| |||| | |||||| ||||||||||||||||||||| |||| |||||||||  | ||||||||||||||||| ||||    
T  41590587 gaacaatttttcgcatacgtgttaagaacattactaaaagttcctctacaaaaaattgtcgcaaaatttgatttctacttcca 41590505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 5250678 - 5250561
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||    |||| ||||||||||||||||||||| || ||| |||||||  | |    
T  5250678 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattactaaaagttcctatgccaaaaattgtcgc 5250579  T
Q  201 aaaatttgatttctacgt 218  Q
    ||||||||||||||||||    
T  5250578 aaaatttgatttctacgt 5250561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 16473054 - 16473140
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| |||||||| ||||||||||||||| | ||||||||||||| || ||||| |||||  ||||||||||||| ||||||| |||||    
T  16473054 attattaaaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccagatttt--ttacttttatctttaacttttatcgtt 16473140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 16477625 - 16477711
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||| |||||||| ||||||||||||||| | ||||||||||||| || ||||| |||||  ||||||||||||| ||||||| |||||    
T  16477625 attattaaaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccagatttt--ttacttttatctttaacttttatcgtt 16477711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 28701869 - 28701810
Alignment:
Q  190 aaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttt 249  Q
    ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||    
T  28701869 aaaattatctcaaatttttatttctacgtccatatttttgttacttttatcttaaacttt 28701810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 28694981 - 28695092
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaa----aattagctcaaaatttgatttctacgtccatattttt 228  Q
    ||||| |||||| ||||||||   ||||||||| |||||||||||||| ||   |||||    |||||||||||||||||| |||||||||||||||||     
T  28694981 gtttttgaacaattttttgtacgtgtattaagagcattactaaaagttccttcacaaaaaaaaaattagctcaaaatttgacttctacgtccatatttta 28695080  T
Q  229 attacttttatc 240  Q
     |||||| ||||    
T  28695081 gttacttatatc 28695092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 30968713 - 30968782
Alignment:
Q  147 ttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctac 216  Q
    ||||| |||||| || | ||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  30968713 ttttgcatacgtgtttataacattactaaaagtttctctacaaaaaattatcgcaaaatatgatttctac 30968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 41315557 - 41315497
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || |||||||||||| ||| |||||||||||| |||||    
T  41315557 aaattagctcaaaattttatttttaggtccatatttttgttagttttatcttgaatttttg 41315497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 5696199 - 5696088
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| |||||| ||||| | |||||| ||||||||||||||  | |    
T  5696199 caaatttgtttaatttatgattaaactcttcagtttttgaacaattttttgcagacgtgttaagatcattattgaaagttcctctgcaaaaaattgtcac 5696100  T
Q  201 aaaatttgattt 212  Q
    ||||||||||||    
T  5696099 aaaatttgattt 5696088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 14122032 - 14121938
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatt 195  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| || ||||| |||||    
T  14122032 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaacaaatt 14121938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 35209753 - 35209600
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||||| ||| |||||  ||  | |||||  |||| | || | |||||||  ||||||| | |  ||| ||||||||||||    
T  35209753 aaatttgtttaattatgcttaaaattttaagttttttaatgattttttacatacttgtttaaaacattataaaaagttccgccacaataaattagctcaa 35209654  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  35209653 aattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 35209600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 6018102 - 6018193
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||| |||||||||||||||| ||||||||||||||  | |||||||| |||| ||||| || | |||| ||| ||||||||| | |||||||    
T  6018102 ttaaaaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttaatttttacgttcaga-ttttgttagttttatctttatcttttgt 6018193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 6244378 - 6244310
Alignment:
Q  185 tgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||||| ||||| |||||||||| ||||||  ||| | |||||| |||||||||| |||||||||||||    
T  6244378 tgcaaagaattatctcaaaattttatttctgtgtctagatttttgttacttttattttgaacttttgtc 6244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 42219432 - 42219364
Alignment:
Q  188 aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  42219432 aaaaaattagctcaaaattttatttttatgtccaaattttcgttagttttatcttgaatttttgacgtt 42219364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 17062619 - 17062526
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||| |||||| ||| | || |||| |||||||||||| ||||||||  ||||| |||||||  | |||||||||||||||| ||||| |||||    
T  17062619 gtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgc-aaaaattgtcgcaaaatttgatttctatgtccagatttt 17062526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 17585739 - 17585832
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||| |||||| ||| | || |||| |||||||||||| ||||||||  ||||| |||||||  | |||||||||||||||| ||||| |||||    
T  17585739 gtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgc-aaaaattgtcgcaaaatttgatttctatgtccagatttt 17585832  T

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Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 7419820 - 7419885
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  7419820 aaattagctcaaaattttatttttaggttcaaatttttgttagttttatcttgaatttttggcgtt 7419885  T

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Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 7637160 - 7637095
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  7637160 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttgacgtt 7637095  T

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Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 12616471 - 12616536
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  12616471 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaaattttgacgtt 12616536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 13699497 - 13699562
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  13699497 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 13699562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 24541959 - 24541894
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||  ||| || ||||| |||||| ||| |||||||||||| ||||| ||||    
T  24541959 aaattagctcaaaattttgtttttaggtccaaatttttgttagttttatcttgaatttttggcgtt 24541894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 28174355 - 28174290
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  28174355 aaattagctcaaaatttaatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 28174290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 36051911 - 36051976
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  36051911 aaattagctcaaaattttatttttaagtccaaattttctttagttttatcttgaatttttggcgtt 36051976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 39106973 - 39106908
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  39106973 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 39106908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 42175312 - 42175247
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || ||||| |||| |||||||||||| ||||| ||||    
T  42175312 aaattagctcaaaattttatttttaggttcaaattttcattagttttatcttgaatttttggcgtt 42175247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 44090598 - 44090533
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  44090598 aaattagctcaaaattttatttttaggtgcaaatttttgttagttttatcttgaatttttggcgtt 44090533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 2826923 - 2826999
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttcta 215  Q
    |||||| |||||| | |||| |||| ||||||||||||||||  ||  |||||||| | | ||||||||||||||||    
T  2826923 gaacaattttttgcagacgtgttaaaaacattactaaaagttcatccacaaaaaatcatcgcaaaatttgatttcta 2826999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 30378182 - 30378242
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  30378182 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 30378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 32513962 - 32514002
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttat 61  Q
    |||||| |||| |||||||||||||| ||||||||||||||    
T  32513962 tttaatccttacttaattttaatagtctttttagtccttat 32514002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 39337083 - 39337130
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactt 248  Q
    ||||||||||||| || ||||||| |||||||||||||||||| |||||    
T  39337083 caaaatttgatttatatgtccata-ttttattacttttatctttaactt 39337130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 9e-33; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 1066723 - 1066541
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  1066723 ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 1066625  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||||  | |||||||||| | |||||||||| ||||||||||||| | |||| |||||||||| |||||||||||||    
T  1066624 tacgaaaagttcatatgcaaaaaatgatctcaaaattttatttctacgtccagaattttgttacttttattttgaacttttgtc 1066541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 16081061 - 16080918
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| |||||||||||| | ||||||||| | |||| || ||||||||||||| |||||||||||| ||    
T  16081061 aaatcgaaatttgtttaattatgcttaaactcttaagttttcgaacaattatttgtatacatgttaaaaatattactaaaagttcctctgcaaaaaagta 16080962  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatc 240  Q
     |||||| |||||||||||| |||| |||||| |||||||||||    
T  16080961 tctcaaattttgatttctacatccagatttttgttacttttatc 16080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 75 - 249
Target Start/End: Complemental strand, 12621888 - 12621715
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||| | | | ||||||||||||| || |    
T  12621888 cactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaatttttagcacaagtattaagaacatcacga 12621790  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttt 249  Q
    ||||||| |||||||||||||| |||||||||| ||| || |||||| |||||| |||||||||| |||||||||    
T  12621789 aaagtttatctgcaaaaaattatctcaaaattttattcctgcgtccagatttttgttacttttattttgaacttt 12621715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 37107613 - 37107836
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        ||||||||||||||||| ||||| || ||||| ||||||| ||||||||| ||||| |    
T  37107613 cttacttaattataatagtgtttttagtccatataaaacaa-ttatacactcagttttagtccctact-aaatctaaatttgcttaattatgcttaaact 37107710  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | ||||||||||||| || |||| |||  ||||||||||||| || ||||||| ||| || |||||| |||||    
T  37107711 tttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaattttaactgcaaaaaattatcttaaaattttattcctgcgtccagatttt 37107810  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | || ||||||| |||||||||||||    
T  37107811 tgttgcttttattttgaacttttgtc 37107836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 70 - 253
Target Start/End: Original strand, 1065666 - 1065848
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| |||||||||||||||||  |||| | ||| | ||| ||| |  |||||||| | |||||||||||||    
T  1065666 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcctaaacttttaagattttgaatatttttttgtacaagtattaagaacat 1065764  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |  |||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||| |||||||||| |||||||||||||    
T  1065765 catgaaaagtttatctgcaaaaaattatctcaaaattttattcctacgtctagatttttgttacttttattttgaacttttgtc 1065848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 44080964 - 44081106
Alignment:
Q  102 caaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||| ||||||||||||| ||||| | ||| |||||| ||||   ||||| | |||| ||||||||| ||||||||||| ||| ||||||||| | | ||    
T  44080964 caaacttgtttaattatgcttaaactcttaagttttcaaacatgcttttgcaaacgtgttaagaacaatactaaaagttcctccgcaaaaaatgatcgca 44081063  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttga 244  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  44081064 aaatttaatttctacgtccatatttttgttacttttatcttga 44081106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 47791818 - 47791998
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||  |||||  ||||| |||||| | |||| ||||||||||||||    
T  47791818 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcagacgtgttaagaacattact 47791916  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||| ||||    
T  47791917 aaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgccgtt 47791998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 41571444 - 41571619
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattac 172  Q
    |||| ||||||||| ||||| || |||| |||||||||| ||||||| ||| | | ||| ||| | |||||| ||||| || || ||||||||||||||     
T  41571444 tacattcagttttagtccctact-aaattcaaatttgttgaattatgcttacacttttaagttcttgaacaattttttttagacatattaagaacattag 41571542  T
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||| ||| |||| |||| |||||||||||||||||||||||||||||  |||||| | ||||||||||||| |||||    
T  41571543 taaa-gttcctctccaaataattagctcaaaatttgatttctacgtcctgatttttgtgacttttatcttgacctttt 41571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 43597773 - 43597625
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| || |||||||||||| | |    
T  43597773 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaaattatcgc 43597674  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| |||||||    
T  43597673 aaaatttgatttctacgtccaga-ttttgttaattttatctttaactttt 43597625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 35482371 - 35482197
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||| ||||||| || |||||||||||||| ||||||||| ||||  ||||| |||||| |||||| |||| | ||||||| |||| |    
T  35482371 cactcagtattagtcctttctcaattc-aaatttgtttaatttatgtttaaactattgagtttttgaacaattttttgcatacatgttaagaaaattatt 35482273  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||| ||||||||||||||  |  ||||||||||||||||||||| | |||| ||| ||||||||| |||||||    
T  35482272 aaaagttcctctgcaaaaaattgtcctaaaatttgatttctacgtccaga-ttttgttaattttatctttaactttt 35482197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 233
Target Start/End: Original strand, 8081782 - 8081944
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || ||||||||||    
T  8081782 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacat 8081880  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattac 233  Q
    ||| |||||||  ||| |||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  8081881 tacgaaaagttcatctccaaaaaattatctcaaaattttatttctgcgtccatatttttgttac 8081944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 37108718 - 37108537
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    ||||||||||||||||| ||||| || ||||| ||||||| ||||||||| ||||| | ||| | ||| ||||||  ||||| | | || ||||||||||    
T  37108718 ttatacactcagttttagtccctact-aaatctaaatttgcttaattatgcttaaacttttaagattttgaacaa--ttttgcacaagtgttaagaacat 37108622  T
Q  170 tactaaaagtttctctgcaaaaaattagctc-aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||||  |||||||||||||| ||| ||||||| |||| | |||||| | |||| |||||||||| |||||||||||||    
T  37108621 tacgaaaagttcatctgcaaaaaattatctcaaaaattttatttttccgtccagaattttgttacttttattttgaacttttgtc 37108537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 37539848 - 37539945
Alignment:
Q  159 attaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| | ||| |  ||||| || ||||||||||||||||||||||||    
T  37539848 attaagaacattactaaaagttcctctgtaaaaaattatctcaaaatttgatttccaagtctaattttttgttgcttttatcttgaacttttgtcgtt 37539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 252
Target Start/End: Original strand, 1260123 - 1260296
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaa 177  Q
    ||||||||| ||||| || |||| |||| ||||||||||||||||||| | ||| |||||  | ||| |||||| | |||| |||| |||||| ||||||    
T  1260123 tcagttttagtccctact-aaattcaaaattgtttaattatgtttaaacttttaagtttttaagcaattttttgaagacgtgttaaaaacattgctaaaa 1260221  T
Q  178 gtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||| |||  |||||||||| ||| |||||| ||||||| || || |||||| |  ||||||||||||||||||||    
T  1260222 gttcctccacaaaaaattatctctaaatttaatttctatgttcaaatttttgtggcttttatcttgaacttttgt 1260296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 10620764 - 10620655
Alignment:
Q  147 ttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagct-caaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||| | | | ||||||||||||| |||||||||| |||| ||||||||||| | ||    
T  10620764 ttttgtatacatgttaagaacattactaaaagcttctctgcaaaaaaattgttacaaaatttgatttatacgtccata-ttttgttacttttatcattaa 10620666  T
Q  246 cttttgtcgtt 256  Q
    |||||||||||    
T  10620665 cttttgtcgtt 10620655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 28924540 - 28924653
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| || | |||||||||||| |||||||| |||||||||| |||| |||||  ||||||||||||||||| |||||| ||||| || |    
T  28924540 aacaattttttgtaaactttttaagaacatta-taaaagttcctctgcaaaatattatctcaa--tttgatttctacgtccagatttttgttactctttt 28924636  T
Q  240 cttgaacttttgtcgtt 256  Q
    |||||||||||||||||    
T  28924637 cttgaacttttgtcgtt 28924653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 14990803 - 14990686
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| |||||| ||| ||||||||||||||||| ||||||||||||||| |  |||||||||||||||| | || | |||| |||    
T  14990803 gtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaaattatcgtaaaatttgatttctacattcaga-ttttgtta 14990705  T
Q  233 cttttatcttgaacttttg 251  Q
     ||||||||| ||||||||    
T  14990704 attttatctttaacttttg 14990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 15420414 - 15420297
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| |||||| ||| ||||||||||||||||| ||||||||||||||| |  |||||||||||||||| | || | |||| |||    
T  15420414 gtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaaattatcgtaaaatttgatttctacattcaga-ttttgtta 15420316  T
Q  233 cttttatcttgaacttttg 251  Q
     ||||||||| ||||||||    
T  15420315 attttatctttaacttttg 15420297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 27727473 - 27727363
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||| | |||| |||||||||||||||||| || |||| |||||||||  | |||||||||||||||||||||| |||||  | | ||||||||||||    
T  27727473 tttttgcacacgtgttaagaacattactaaaaattcctctacaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaaattttatcttgaa 27727374  T
Q  246 cttttgtcgtt 256  Q
    |||||| ||||    
T  27727373 cttttgccgtt 27727363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 9633485 - 9633322
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattac 172  Q
    |||||||||||||| |||||   ||||| |||||||||||||||||| ||||| | ||| ||||| |||||| |||||| | |  | ||| |||||||||    
T  9633485 tacactcagttttagtccctag-caaattcaaatttgtttaattatgcttaaactcttaagtttt-gaacaattttttgcagatattttatgaacattac 9633388  T
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||||| ||| ||||||| ||| |||||||| |||||| ||  |||| |||||| |||||||||    
T  9633387 taaaagttcctccgcaaaaatttatctcaaaatgtgatttttatatccaaatttttgttactttta 9633322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 43574245 - 43574397
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||| ||||| |||||| |||||| | || | || |||||||||||| ||||| ||  ||||||||||| | |    
T  43574245 caaatttgtttaatttatgtttaaactcttaagtttttgaacaattttttgcagacatgtttagaacattactataagttacttcgcaaaaaattatcgc 43574344  T
Q  201 aaaatttgatttctacgtccatatttttattac-ttttatcttgaacttttgtc 253  Q
    |||||||||||||||| || | | ||||||||| ||||||||| ||||||||||    
T  43574345 aaaatttgatttctacatcta-aattttattactttttatctttaacttttgtc 43574397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 6588693 - 6588844
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||| | | |||| |||||||||||||||||||||  ||| |||||||||    |    
T  6588693 caaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttcatctccaaaaaattgttgc 6588792  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||||||||||| |  ||| ||| ||||||||| ||||||||||    
T  6588793 aaaatttgatttctacgtccaga-atttgttaattttatctttaacttttgtc 6588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 21109636 - 21109481
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||| ||| ||| ||||| | |||  |||| |||||| |||||| |||||| || |||||||||||||||||| |||||||||||||||   |    
T  21109636 caaatttgtttcatttatgcttaaactcttaaatttttgaacaattttttgcatacgtgtttagaacattactaaaagttcctctgcaaaaaattatagc 21109537  T
Q  201 aaaatttgatttctacgtccatatttttattac-ttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| || | | |||| |||| ||||||||| || ||||||||||    
T  21109536 aaaatttgatttctacatcgaga-ttttgttactttttatctttaatttttgtcgtt 21109481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 44168068 - 44167932
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  |||||  ||||||| |||| ||||||||||||||||||||| ||| ||||||||||| |      
T  44168068 caaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgt 44167971  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatc 240  Q
    |||||||||||| || ||||| | ||||||||||||||||    
T  44167970 aaaatttgatttatatgtccaga-ttttattacttttatc 44167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 46330844 - 46330959
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| |||  |||||||||||||||||||||  || ||||||||||| | ||||||||||||| || ||| | | |||||||||||||||    
T  46330844 aacaattttttgtagacgcgttaagaacattactaaaagttcatccgcaaaaaattatcgcaaaatttgatttatatgtcgaga-ttttattacttttat 46330942  T
Q  240 cttgaacttttgtcgtt 256  Q
    ||| ||||||| |||||    
T  46330943 ctttaacttttatcgtt 46330959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 15653081 - 15652955
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | |||  |||| |||||| |||||  | |||| ||||||||||||||||||||| |||  |||||||||| |      
T  15653081 caaatttgtttaatttatgcttaaactcttaaatttttgaacaattttttacaaacgtgttaagaacattactaaaagttcctccacaaaaaattatcgt 15652982  T
Q  201 aaaatttgatttctacgtccatatttt 227  Q
    ||||||||||||||||||||| |||||    
T  15652981 aaaatttgatttctacgtccaaatttt 15652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 1961965 - 1962057
Alignment:
Q  163 agaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||  |||||||||||||  | |||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  1961965 agaacattactaaaagttcatctgcaaaaaattgtcgcaaaatttaatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 1962057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 4883901 - 4883776
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||||||||| | ||  ||||| ||| || |||||  | |||| ||||||||||||||||| ||| || |||||||||||  | ||    
T  4883901 aaatttgtttaatttatgtttaaactcttgagtttttgaataattttttacagacgtgttaagaacattactaaacgttcctatgcaaaaaattgtcgca 4883802  T
Q  202 aaatttgatttctacgtccatatttt 227  Q
    |||||||||||||||||||| |||||    
T  4883801 aaatttgatttctacgtccagatttt 4883776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 253
Target Start/End: Original strand, 8832683 - 8832866
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaac-a 168  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | |||  ||||| |||||| | | || | |||||| |    
T  8832683 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagatttttaacaattttttgcacaagtgtcaagaacta 8832781  T
Q  169 ttactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||| |||||||  ||| | || ||||| |||||||||| |||||| |||||| |||||| |||||||||| || ||||||||||    
T  8832782 ttacgaaaagttcatctccgaataattatctcaaaattttatttctgcgtccagatttttgttacttttattttaaacttttgtc 8832866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 22378688 - 22378593
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||| |||||||||||| || ||||||||| |  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  22378688 ttaagaacgttactaaaagttcctatgcaaaaaaatgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 22378593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 253
Target Start/End: Complemental strand, 42974394 - 42974246
Alignment:
Q  105 atttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaa 204  Q
    ||||||||||||||| ||||| | ||| | |||  ||||| |||||| | | || | ||||||||||| |||||||  ||| |||||| ||| |||||||    
T  42974394 atttgtttaattatgcttaaacttttaagattttaaacaattttttgcacaagtgtcaagaacattacgaaaagttcatctccaaaaacttatctcaaaa 42974295  T
Q  205 tttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||| |||||| |||||| |||||||||| |  ||||||||||    
T  42974294 ttttatttctgcgtccagatttttgttacttttatttcaaacttttgtc 42974246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 45958902 - 45958811
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||||| |||| |||| |||||||||||||||| ||| |||||||||||  |||||||||||||| || ||||| | ||||||||||||||    
T  45958902 tttttgtagacgtgttaataacattactaaaagttcctccgcaaaaaattatttcaaaatttgatttatatgtccaga-ttttattactttta 45958811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 18059012 - 18059123
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  |||||||||||| |||||| | |||| |||||||  |||||||| ||| ||||||||||||||  | |    
T  18059012 caaatttgtttaatttatgtttaaactcttgagttttcgaacaaatttttgcagacgtgttaagaaagttactaaaggttcctctgcaaaaaattgtcgc 18059111  T
Q  201 aaaatttgattt 212  Q
    ||||||||||||    
T  18059112 aaaatttgattt 18059123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 38159013 - 38159112
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| ||||||||||||||||||||| || |||||||||||  | ||||||||||||||||| |||| |||||  | |  |||||||| |||||||||||    
T  38159013 acgtgttaagaacattactaaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacctccagattttgttaa--tttatctttaacttttgtcg 38159110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 7238891 - 7238739
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||  | ||| |||||| |||||| | |||| |||||||||||| |    
T  7238891 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttgaggttttgaacaattttttgcagacgtgttaagaacattatt 7238793  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||| | |||| |||||||||  | || ||||||||||||||||||| |||||    
T  7238792 aaaaggtcctctacaaaaaattgtcgcataatttgatttctacgtccagatttt 7238739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 46044580 - 46044432
Alignment:
Q  103 aaatttgtttaatta-tgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaa-ttagctc 200  Q
    ||||||||||||||| || ||||| | ||| |||||  ||||| |||||||| |||| |||| |||||||||||| |||  |||| |||||| ||| | |    
T  46044580 aaatttgtttaattaatgcttaaactcttaagttttttaacaattttttgtagacgtgttaaaaacattactaaatgttcatctgtaaaaaatttatcgc 46044481  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||| |||| || ||||| | |||||||||||||||||| |||||||    
T  46044480 aaaattttatttatatgtcca-aattttattacttttatctttaactttt 46044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 256
Target Start/End: Complemental strand, 11397278 - 11397094
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaaca 168  Q
    |||| |||||||| ||||||||| | ||| || |||||||||||||| ||||| ||| | ||| ||||| ||||||  ||||| |||||| |||| ||||    
T  11397278 ttatgcactcagtattattccctacacaattc-aaatttgtttaatttatgttcaaactcttaagtttttgaacaatcttttgcatacgtgttaaaaaca 11397180  T
Q  169 ttactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    || ||||||||| || || |||||| || |  ||||||||||||||| ||   ||  ||| ||||||||||||| |||||||| ||||    
T  11397179 ttgctaaaagttcctttgtaaaaaaatatcggaaaatttgatttctatgt--ttagatttgttacttttatctttaacttttgacgtt 11397094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 4926352 - 4926527
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  |||||  ||||| |||||  | |||| ||||||||||||||    
T  4926352 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttaaacaattttttacagacgtgttaagaacattact 4926450  T
Q  174 aaaagtttctc---tgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactt 248  Q
    ||||||| ||    |||||||||||  | ||||||||||||||||||| || | |||| ||| ||||||||| |||||    
T  4926451 aaaagttcctactatgcaaaaaattgtcgcaaaatttgatttctacgttcaga-ttttgttaattttatctttaactt 4926527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 6972416 - 6972353
Alignment:
Q  188 aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||||||||||||| ||||| ||||||  |||||| |||||||| |||||    
T  6972416 aaaaaattagctcaaaatttgatttctaggtccaaatttttgctactttaatcttgaaattttg 6972353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 38599073 - 38599128
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||||||||| |||||| |||||| || ||||||||||    
T  38599073 aaaatttgatttctacgtccatatttttgttacttatatcttaaaattttgtcgtt 38599128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 36019988 - 36019897
Alignment:
Q  165 aacattactaaaagtttctctgc-aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||| ||| ||||||||  | |||||||||||||||||||| | | |||| ||| ||||||||| |||||||| ||||    
T  36019988 aacattactaaaagtttctatgcaaaaaaattgtcgcaaaatttgatttctacgtctaga-ttttgttaattttatctttaacttttgccgtt 36019897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 38593208 - 38593359
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| ||||||||||||||||||| ||||| |||        |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| |    
T  38593208 cttacttaattttaatagtgttttgagtccatataaaaaaa-ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaact 38593305  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagttt 181  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| ||||||||    
T  38593306 tttaagattttgaacaattttttgcaaaagtgttaagaacattacgaaaagttt 38593359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 41327585 - 41327493
Alignment:
Q  153 atacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||| |||| |||||||||   |||||| |||  |||||||||||||||||||||| ||| || || || ||||| |||||||||||||||||    
T  41327585 atacttatttagaacattatacaaagttcctccacaaaaaattagctcaaaatttgttttttaggttcaaattttcattacttttatcttgaa 41327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 38594604 - 38594670
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||||||||| |||||||||| |||| | |||| | |||||| |||||||||| |||||||||||||    
T  38594604 caaaaaattatctcaaaatttaatttatgcgtctagatttttgttacttttattttgaacttttgtc 38594670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 18798867 - 18798995
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgt 120  Q
    |||||| |||| ||||||||||||||||||||| ||| |||        |||| |||| ||||||| ||||| || ||||| ||||||||||||||||||    
T  18798867 tttaatccttacttaattttaatagtgtttttattccatataaaaaaa-ttatgcacttagttttaatccctact-aaatctaaatttgtttaattatgt 18798964  T
Q  121 ttaaaatattatgttttcgaacaactttttg 151  Q
    ||||| | ||| | ||| |||||| ||||||    
T  18798965 ttaaacttttaagattttgaacaattttttg 18798995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 27417502 - 27417425
Alignment:
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||| ||| || |||||||||||||||||||||| |||||||  |||| |||||   | ||||||||||||||||||    
T  27417502 taaaattttatccgcaaaaaattagctcaaaatttaatttctaattccagattttccgtccttttatcttgaactttt 27417425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 30740777 - 30740717
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || |||||||||||  ||| |||||||||||| |||||    
T  30740777 aaattagctcaaaattttatttttaggtccatattttcgttagttttatcttgaatttttg 30740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 6330985 - 6331056
Alignment:
Q  185 tgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||  |  ||||||||||||||| ||||| |||||| ||| ||||||||| |||||||| ||||    
T  6330985 tgcaaaaaattgtcgtaaaatttgatttctatgtccagatttttgttaattttatctttaacttttgccgtt 6331056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 10463506 - 10463431
Alignment:
Q  178 gtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    |||| ||| ||||||||||  | |||| || ||||||||||||| |||||| ||||||||||||| || |||||||    
T  10463506 gtttgtctccaaaaaattatttgaaaaatttatttctacgtccagatttttgttacttttatcttaaatttttgtc 10463431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 28642476 - 28642535
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| ||||    
T  28642476 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaattttt 28642535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 3495748 - 3495797
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  3495748 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 3495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 14962663 - 14962609
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    ||||||||||||||||| |||| || ||||| |||||  ||||||||||||||||    
T  14962663 aaattagctcaaaattttatttttaggtccaaattttcgttacttttatcttgaa 14962609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 15392135 - 15392081
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    ||||||||||||||||| |||| || ||||| |||||  ||||||||||||||||    
T  15392135 aaattagctcaaaattttatttttaggtccaaattttcgttacttttatcttgaa 15392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 43084131 - 43084053
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagt 179  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||    
T  43084131 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagt 43084053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 7208108 - 7208043
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  7208108 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 7208043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 8833524 - 8833444
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttg 151  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||||||||| | ||| | ||| |||||| ||||||    
T  8833524 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgtttaaacttttaagattttgaacaattttttg 8833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 9900646 - 9900581
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  9900646 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 9900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 21202389 - 21202324
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  21202389 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 21202324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 23023631 - 23023566
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  23023631 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 23023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 23064437 - 23064502
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  23064437 aaattagctcaaaattttatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 23064502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 252
Target Start/End: Complemental strand, 29156240 - 29156105
Alignment:
Q  115 ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttct 214  Q
    ||||| ||||| | ||| ||||| |||||| || ||||| || | ||| |||||||| |||||| | |||  |||||||||| | |||||||||||||||    
T  29156240 ttatgcttaaactcttaagtttttgaacaatttcttgtagacatgttatgaacatta-taaaaggtcctccacaaaaaattatcgcaaaatttgatttct 29156142  T
Q  215 acgtccatatttttattacttttatcttgaacttttgt 252  Q
    | ||||| | || |||| |||||| ||| |||||||||    
T  29156141 atgtccaga-ttctattgcttttagctttaacttttgt 29156105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 39035952 - 39035887
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  39035952 aaattagctcaaaattttatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 39035887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 45983619 - 45983684
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  45983619 aaattagctcaaaattttatttttaagtccaaattttcgttagttttatcttgaatttttggcgtt 45983684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 45986298 - 45986233
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  45986298 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 45986233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 3495701 - 3495741
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  3495701 aacaattttttgtagacgtgttaagaacattactaaaagtt 3495741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 4900091 - 4900027
Alignment:
Q  163 agaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||||||| |||||||| ||  || |||||||| | ||||||||||||||||| |||| |||||    
T  4900091 agaacattaataaaagttccttcgcgaaaaattatcgcaaaatttgatttctacatccagatttt 4900027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 15654742 - 15654798
Alignment:
Q  195 tagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||| || ||| | | ||||| ||||||||||||||| |||||    
T  15654742 tagctcaaaatttgatttttaagtctaaaattttactacttttatcttgaaattttg 15654798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 33574868 - 33574928
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||||| || || || || ||||| |||| |||||||||||| |||||    
T  33574868 aaattagctcaaaatttgaattttaggtgcaaattttcattagttttatcttgaatttttg 33574928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 9e-33; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 253
Target Start/End: Complemental strand, 47379465 - 47379314
Alignment:
Q  102 caaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||||||| ||| | | ||| ||||||||| |   ||||| | |||| ||||||||| ||||||||||| ||| ||||||||||| | ||    
T  47379465 caaatttgtttaattatgcttatactcttaagttttcgaaaatgcttttgcagacgtgttaagaacaatactaaaagttcctccgcaaaaaattatcgca 47379366  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  47379365 aaatttgatttctacgtccatatttttgttacttttatcttgacgttttgtc 47379314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 38499223 - 38499438
Alignment:
Q  29 ttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaata 128  Q
    |||||||||||||||||| |||||||||| |||        |||| |||| ||||||| ||||| || ||||| ||||||||||||| ||||||||| |     
T  38499223 ttatttaattttaatagtatttttagtccctatacaaaat-ttatgcacttagttttagtccctact-aaatctaaatttgtttaatcatgtttaaattt 38499320  T
Q  129 ttatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattttt 228  Q
    |||   ||| |||||| |||||| | | || |||||||||||||||||||||  |||||||||||| | |||||||||| ||||||| ||||| ||||||    
T  38499321 ttaacgttttgaacaattttttgcagaagtgttaagaacattactaaaagttcatctgcaaaaaataatctcaaaattttatttctatgtccagattttt 38499420  T
Q  229 attacttttatcttgaact 247  Q
     ||||||||||||||||||    
T  38499421 -ttacttttatcttgaact 38499438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 44452020 - 44452242
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| ||| | || ||||| ||||||||||||||||| ||||| |    
T  44452020 cttacttaattataatagtgtttttagtccatataaaacaa-ttatgcactcagttttagtccttact-aaatctaaatttgtttaattatgcttaaact 44452117  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | ||||||||||||| || |||||||| ||||| |||||||| |||||||||| ||| || |||||| |||||    
T  44452118 tttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgc-aaaaattatctcaaaattttattcctgcgtccagatttt 44452216  T
Q  228 tattacttttatcttgaacttttgtc 253  Q
    | |||||||||| |||||||||||||    
T  44452217 tgttacttttattttgaacttttgtc 44452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 55283110 - 55283268
Alignment:
Q  98 aatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattag 197  Q
    |||||||||||||||||||||| ||||| | ||   ||||  |||||  ||||||| || ||||||||||||||| ||||||  |||| ||||| ||||     
T  55283110 aatccaaatttgtttaattatgcttaaattcttgaatttttaaacaatcttttgtacacctattaagaacattacgaaaagtccctctacaaaatattaa 55283209  T
Q  198 ctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| || |||||| ||||| || ||||||||||||||||||    
T  55283210 ctcaaaatttgatttctacgttcagatttttgttactcttttcttgaacttttgtcgtt 55283268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 53323754 - 53323935
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgt-atacgtattaagaacattac 172  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||   |||||| |||||||||||||    
T  53323754 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttacatacgtgttaagaacattac 53323852  T
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||| || |||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  53323853 taaaagttcctatgcaaaaaattgtcacaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 53323935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 73 - 283
Target Start/End: Complemental strand, 52948078 - 52947869
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattac 172  Q
    |||||||| ||||  |||||||| |||| |||||||||||||||||||||||| | ||   |||| |||||| ||||| |||| || || | ||||||||    
T  52948078 tacactcacttttgatcccttct-aaattcaaatttgtttaattatgtttaaactcttgaatttttgaacaattttttatatatgtgttcaaaacattac 52947980  T
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgttnnnnnnnttcatattt 272  Q
    |||||||| |||  | ||||||||| |||||| |||||||||||| ||| | |||| | |||||||||||||| ||||||| ||       |||||||||    
T  52947979 taaaagttgctccccgaaaaattagttcaaaaattgatttctacgaccaaacttttgtgacttttatcttgaaattttgtcatttaaaaaattcatattt 52947880  T
Q  273 aattcatctca 283  Q
    |||| ||||||    
T  52947879 aatttatctca 52947869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 256
Target Start/End: Complemental strand, 30331595 - 30331413
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacatta 171  Q
    |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| |||||  |  ||| ||||||||||||    
T  30331595 tacactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacatta 30331497  T
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||| || |||||||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| |||||||| ||||    
T  30331496 ctaaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgccgtt 30331413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 1870152 - 1870266
Alignment:
Q  141 acaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatc 240  Q
    |||| |||||||| || | |||| |||||||||||||||||||| ||||||||||  | ||||||||||||| |||||||||| |||| |||||||||||    
T  1870152 acaattttttgtagacatgttaaaaacattactaaaagtttctcggcaaaaaattgtcacaaaatttgatttatacgtccata-ttttgttacttttatc 1870250  T
Q  241 ttgaacttttgtcgtt 256  Q
    || |||||||||||||    
T  1870251 tttaacttttgtcgtt 1870266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 4850100 - 4850254
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||| ||||||||| ||| ||||| | ||| ||||| |||||| |||||| |||||| |||||||  ||||||||| |||||| ||||||||||| | |    
T  4850100 caaatatgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatacgtgttaagaatgttactaaaaatttctccgcaaaaaattatcgc 4850199  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||| | | |||| ||| ||||||||| |||||||||||||    
T  4850200 aaaatttgatttctacgtcta-agttttgttatttttatctttaacttttgtcgtt 4850254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 256
Target Start/End: Complemental strand, 33177741 - 33177556
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaaca 168  Q
    |||| |||||||| ||||||||| ||||| |  |||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| |||||||||    
T  33177741 ttatgcactcagtattattccctcctcaattt-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaaca 33177643  T
Q  169 ttactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||| | || |||||||||||  |||||||||||||||||||||||| | |||| ||| ||||||||| ||| |||| ||||    
T  33177642 ttactaaaagctcctatgcaaaaaattgtctcaaaatttgatttctacgtccaga-ttttgttaattttatctttaacgtttgccgtt 33177556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 253
Target Start/End: Complemental strand, 34513337 - 34513156
Alignment:
Q  70 ttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    |||| |||||| ||||| ||||| || ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || | ||||||||    
T  34513337 ttatgcactcaattttagtccctact-aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgtcaagaacat 34513239  T
Q  170 tactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||| |||||||  ||| |||||||||| |||||||||| |||||| |||||| |||||| |||||||||| || ||||||||||    
T  34513238 tacgaaaagttcatctccaaaaaattatctcaaaattttatttctgcgtccagatttttgttacttttat-ttaaacttttgtc 34513156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 6818111 - 6817979
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaa 177  Q
    ||||||||| |||||| | ||||| ||||||||||||||||||||||| | |||  |||| |||||| ||||||||||||| |||||||||| | | |||    
T  6818111 tcagttttagtcccttat-aaatcaaaatttgtttaattatgtttaaactcttacatttttgaacaattttttgtatacgttttaagaacataaattaaa 6818013  T
Q  178 gtttctctgcaaaaaattagctcaaaatttgattt 212  Q
    ||| ||| |||||||||| ||||||||||||||||    
T  6818012 gttcctccgcaaaaaatt-gctcaaaatttgattt 6817979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 10321702 - 10321855
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||  ||| ||||||||||| | ||    
T  10321702 aaatttgtttaatttatacttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtccctccgcaaaaaattatcgca 10321801  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  10321802 aaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 10321855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 47939866 - 47939750
Alignment:
Q  102 caaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||||||| ||||| | |||  ||||  | ||| |||||||| || | |||||||||||||||||||||| || ||||||||||| ||||    
T  47939866 caaatttgtttaattatgcttaaacttttagctttttaagcaattttttgtagacatgttaagaacattactaaaagtttttccgcaaaaaattatctca 47939767  T
Q  202 aaatttgatttctacgt 218  Q
    |||||||||||||||||    
T  47939766 aaatttgatttctacgt 47939750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 33689582 - 33689428
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| | || |||||||||||||||||| || ||| ||||||||||| | |    
T  33689582 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattactaaaaattcctccgcaaaaaattatcgc 33689483  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||| ||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  33689482 aaaatttggtttatatgtccaga-ttttattacttttatctttaacttttatcgtt 33689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 31316547 - 31316700
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  |||||  ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||| | ||    
T  31316547 aaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattactaaaagttcctctgcaaaaaattatcgca 31316646  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| || ||||| | |||||||| ||||||||| || |||| |||||    
T  31316647 aaatttgatttatatgtcca-aattttattatttttatctttaatttttatcgtt 31316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 51876014 - 51876139
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| ||||||||||||||| | ||    
T  51876014 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttagagacgtgttaagaacattactaaaagttcctctgcaaaaaattatcaca 51876113  T
Q  202 aaatttgatttctacgtccatatttt 227  Q
    ||||||||||| |||||||| |||||    
T  51876114 aaatttgatttatacgtccagatttt 51876139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 252
Target Start/End: Complemental strand, 20178192 - 20178014
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacatta 171  Q
    |||||||||| ||| ||| | ||||| || |||||||||||||| ||| ||||| | ||  ||| | |||||| |||||  |||| | ||||||||||||    
T  20178192 tacactcagtattaatccatcctcaattc-aaatttgtttaatttatgcttaaattcttgggttattgaacaattttttacatacatgttaagaacatta 20178094  T
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||||||||| |||| |||||||||  | ||||||||||||| |||||||| | |||| ||||||||||||| |||||||||    
T  20178093 ctaaaagttcctctacaaaaaattgtcgcaaaatttgatttatacgtccaga-ttttgttacttttatctttaacttttgt 20178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 25422073 - 25422226
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||| |||||  ||||  |||||||| |||| ||||||||||||||||||| |  || ||||||||||| | |    
T  25422073 caaatttgtttaatttatgtttaaactcttaagttttttaacatttttttgtagacgtgttaagaacattactaaaagatcatccgcaaaaaattatcgc 25422172  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| |||||  ||||||||||||| ||| ||| |||||    
T  25422173 aaaatttgatttatatgtccagatttt--ttacttttatctttaacatttatcgtt 25422226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 44209771 - 44209633
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||| |||||  || || |||||||| |||| |||||||||||||||||||||  |  ||||||||||| | |    
T  44209771 caaatttgtttaatttatgtttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttcgtacgcaaaaaattatcgc 44209672  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatc 240  Q
    |||||||||||| || ||||| | ||||||||||||||||    
T  44209671 aaaatttgatttatatgtccaga-ttttattacttttatc 44209633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 38114527 - 38114347
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  |||||  ||||| |||||  | |||| ||||||||||||||    
T  38114527 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagttttttaacaaatttttacagacgtgttaagaacattact 38114429  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| || |||||||||||  | ||||||||||||| || ||||| | |||| ||| ||||||||| |||||||| ||||    
T  38114428 aaaagttcctatgcaaaaaattgtcacaaaatttgatttatatgtccaga-ttttgttaattttatctttaacttttgccgtt 38114347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 238
Target Start/End: Original strand, 13603761 - 13603924
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattac 172  Q
    |||||||||||||| |||||   ||||| |||||||||||||||||| ||||| | ||| ||||| |||||| |||||| | |  | ||| |||||||||    
T  13603761 tacactcagttttagtccctag-caaattcaaatttgtttaattatgcttaaactcttaagtttt-gaacaattttttgcagatattttatgaacattac 13603858  T
Q  173 taaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||||| ||| ||||||| ||| |||||||| |||||| ||  |||| |||||| |||||||||    
T  13603859 taaaagttcctccgcaaaaatttatctcaaaatgtgatttttatatccaaatttttgttactttta 13603924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 13718205 - 13718110
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||||||| ||||||||||||||  | ||||||||||||||||||||| |  |||| ||| ||||||||||| |||||||||||    
T  13718205 ttaagaatattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtcc-tgattttgttaattttatcttgatcttttgtcgtt 13718110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 35061076 - 35060961
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| |||| |||||||||||| |||||||| ||| ||||||||||| | ||||||||||||| ||  |||| | |||||||||||||||    
T  35061076 aacaattttttgtagacgtgttaagaacattattaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatatccaga-ttttattacttttat 35060978  T
Q  240 cttgaacttttgtcgtt 256  Q
     || ||||||| |||||    
T  35060977 ttttaacttttatcgtt 35060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 19522718 - 19522872
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||  | || |||||||||||  | |    
T  19522718 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaaagtcctatgcaaaaaattgtcgc 19522817  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| | |||| ||| |||||| || |||||||| ||||    
T  19522818 aaaatttgatttctacgtccaga-ttttgttaattttatttttaacttttgccgtt 19522872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 47463437 - 47463496
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  47463437 attactaaaagttcctctgcaaaaaattatcacaaaatttgatttctacgtccatatttt 47463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 218
Target Start/End: Complemental strand, 28448695 - 28448557
Alignment:
Q  79 cagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaa 177  Q
    |||||||| ||||| || |||| ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| || |||||||||||||||    
T  28448695 cagttttagtccctcct-aaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgca-acgtgttgagaacattactaaaa 28448598  T
Q  178 gtttctctgcaaaaaattagctcaaaatttgatttctacgt 218  Q
    ||| || |||||||||||  | |||||||||||||||||||    
T  28448597 gttcctatgcaaaaaattgtcgcaaaatttgatttctacgt 28448557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 44289679 - 44289838
Alignment:
Q  98 aatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| |  || | ||||||| |    
T  44289679 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcatccgaaaaaaat-a 44289777  T
Q  197 gctcaaaa-tttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     | ||||| |||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  44289778 tcgcaaaaatttgatttctacgtccatatttttgttacttatatcttaaacttttgtcgtt 44289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 48220175 - 48220032
Alignment:
Q  102 caaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||||||| ||||| | |||||||||  ||||   ||||| | |  | |||||||||||||||||| || ||| |||||||||||    |    
T  48220175 caaatttgtttaattatgcttaaactcttatgttttttaacattcttttgcagatatgttaagaacattactaaaaattcctccgcaaaaaattattgta 48220076  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||| |||||||| |||| |||||| |||||||||| |||||    
T  48220075 aaatttaatttctacatccaaatttttgttacttttatattgaa 48220032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 37329493 - 37329649
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | |||  ||||  ||||| |||||||| |||| |||||||||||||||||||||  || |||||||||||   |    
T  37329493 caaatttgtttaatttatgtttaaactcttaaattttttaacaattttttgtagacgtgttaagaacattactaaaagttcatccgcaaaaaattattgc 37329592  T
Q  201 aaaatttgatt--tctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| |||  | ||  |||| | |||||||||||||||||| ||||||| |||||    
T  37329593 aaaatttaatttatatatatccaga-ttttattacttttatctttaacttttatcgtt 37329649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 28164079 - 28163863
Alignment:
Q  33 ttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattat 132  Q
    ||||||||||||||| ||||||||| |||        |||| |||||| ||||| |||||  | || || ||||||||||||||||| ||||| | |||     
T  28164079 ttaattttaatagtgcttttagtccatataaaaaaaattatgcactcaattttagtccctatttaa-tctaaatttgtttaattatgcttaaacttttaa 28163981  T
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
      ||| |||||| |||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||  ||||| |||||| | |||| |||||| |||    
T  28163980 aattttgaacaattttttgcaca-gtgttaagaacattacgaaaagttcatctccaaaaaattatctc--aattttatttctgcttccagatttttgtta 28163884  T
Q  233 cttttatcttgaacttttgtc 253  Q
    ||||||| || ||||||||||    
T  28163883 cttttattttcaacttttgtc 28163863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 43938007 - 43938099
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaa 193  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||||| || | ||||||||||||||||||||| ||||||||||||    
T  43938007 caaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgtagacatgttaagaacattactaaaagttcctctgcaaaaaa 43938099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 48082445 - 48082604
Alignment:
Q  98 aatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||  | |||| |||||||| ||| |||||| |  || | ||||||| |    
T  48082445 aatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcatccgaaaaaaat-a 48082543  T
Q  197 gctcaaaa-tttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     | ||||| |||||||||||||||||||||||| ||| || |||||| |||||||||||||    
T  48082544 tcgcaaaaatttgatttctacgtccatatttttgttatttatatcttaaacttttgtcgtt 48082604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 22068103 - 22068222
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| ||| |  ||| || | |||| ||||||||||||||||||||| ||||||||||||||  | |    
T  22068103 caaatttgtttaatttatgtttaaactcttgagtttttgaatagttttctgcagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgc 22068202  T
Q  201 aaaatttgatttctacgtcc 220  Q
    ||||||||| || |||||||    
T  22068203 aaaatttgacttttacgtcc 22068222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 23473767 - 23473617
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaacttttt-gtatacgtattaagaacattactaaaagtttctctgcaaaaaattagct 199  Q
    ||||||||||||||| ||| ||||| | ||| ||||| ||| || ||||| ||| |||| | |||||| |||| ||||||| ||||||||||||||| |     
T  23473767 caaatttgtttaatttatgcttaaagtcttaagtttttgaataatttttttgtagacgtgtcaagaacgttaccaaaagttcctctgcaaaaaattatcg 23473668  T
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||  || ||||| | ||||||||||| |||||| || |||||    
T  23473667 caaaatttgattcttatgtccaga-ttttattacttatatctttaatttttg 23473617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 10085553 - 10085646
Alignment:
Q  163 agaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattac-ttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||| ||| ||||||||||| | ||||||||||||||||  ||| |  |||| |||| ||||||||| |||||||||||||    
T  10085553 agaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttctatatcc-tgattttgttactttttatctttaacttttgtcgtt 10085646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 35351954 - 35351804
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaacttt-ttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    ||||||||||||||||||||||| |  |  ||||| |||||||||| ||||  | || |||| |||||||  |||||||  || ||||||||| | ||||    
T  35351954 aaatttgtttaattatgtttaaactcctgagtttttgaacaactttcttgtggaggtgttaaaaacattaacaaaagttcatccgcaaaaaatcatctca 35351855  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
     ||||||||||||||||  | | | ||  ||||||||||||||||||||||    
T  35351854 taatttgatttctacgtataaagtattgatacttttatcttgaacttttgt 35351804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 55938075 - 55938224
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| ||||||| ||||||||||||  |||||  |||||||  | ||    
T  55938075 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaatattactaaaagtacctctgtgaaaaattgtcgca 55938174  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||||||||||||||||| || | |||| ||| ||||||||| ||| |||||    
T  55938175 aaatttgatttctacgtgcaga-ttttgttaattttatctttaacatttgt 55938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 44453036 - 44452943
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||| |||||||  |||||||||||||| |||||  |||  ||||| |||||| | ||||  ||||||||| |||||||||||||    
T  44453036 ttaagaacattacgaaaagttcatctgcaaaaaattatctcaattttttttttctgcgtccagaattttgctacttttattttgaacttttgtc 44452943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 47309414 - 47309589
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||||||||| | ||  ||||| |||||| | |||  | || | |||||||||||| |    
T  47309414 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgtttaaactcttgagtttttgaacaattatttacagacatgttaagaacattaat 47309512  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||| || |||||||||||    ||||||||||||| |||||| | | |||| ||| ||||||||| ||||||||    
T  47309513 aaaagttcctatgcaaaaaattgtagcaaaatttgatttatacgtcaaga-ttttgttaattttatctttaacttttg 47309589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 42972983 - 42972873
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||| | |||| ||||||||||| ||||| ||| | ||||||||||||  |  ||||||||||||||||||||| | |||| ||| ||||||    
T  42972983 aacaattttttgcagacgtgttaagaacattgctaaa-gttccactgcaaaaaattgtcgtaaaatttgatttctacgtcca-aattttgttaattttat 42972886  T
Q  240 cttgaacttttgt 252  Q
    ||| |||||||||    
T  42972885 ctttaacttttgt 42972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 53423795 - 53423700
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||||| ||| ||||||||||  | ||||||||| ||   ||||||||| |||| ||||||||||||  |||||||| ||||    
T  53423795 ttaagaacattactaaaagttcctccgcaaaaaattgtcgcaaaatttgtttcacacgtccata-ttttgttacttttatctataacttttgccgtt 53423700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 34509721 - 34509812
Alignment:
Q  165 aacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||  ||| ||| ||| |||| || |||||||||||||| |||| || ||||| ||||| ||||||||||||||||| ||||| ||||    
T  34509721 aacattataaaacgttcctccgcaataagttagctcaaaattttatttttaggtccaaattttcattacttttatcttgaatttttggcgtt 34509812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 35821167 - 35821221
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaa 193  Q
    |||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||    
T  35821167 gaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaaa 35821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 7490753 - 7490852
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| ||||| |||||||||||| || ||||||||||||||  | || | ||||||||||||||||| | |||| ||| ||||||||| |||||||| ||    
T  7490753 acgtgttaagcacattactaaaa-ttcctctgcaaaaaattgacgcatattttgatttctacgtcca-aattttgttaattttatctttaacttttgccg 7490850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 29445627 - 29445692
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| ||||    
T  29445627 aaattagctcaaaattttatttctaggtccaaattttcgttagttttatcttgaatttttggcgtt 29445692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 47876045 - 47875980
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| |||||||||||| ||||| ||||    
T  47876045 aaattagctcaaaattttatttttaggtccaaattttcattagttttatcttgaatttttggcgtt 47875980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 53238086 - 53238021
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| ||||| |||| |||||||||||| ||||| ||||    
T  53238086 aaattagctcaaaattttatttttaggtccaaattttcattagttttatcttgaatttttgacgtt 53238021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 3873374 - 3873324
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgt 218  Q
    ||||||||||||| || |||||||||||  | |||||||||||||||||||    
T  3873374 attactaaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgt 3873324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 11670211 - 11670260
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  11670211 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 11670260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 22309589 - 22309551
Alignment:
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgattt 212  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  22309589 aaaagtttctccgcaaaaaattaactcaaaatttgattt 22309551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 343909 - 343974
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  343909 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 343974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 6203161 - 6203226
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  6203161 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaaattttggcgtt 6203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 8949613 - 8949678
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  8949613 aaattagctcaaaattttatttttaggtccaaattttcgttaattttatcttgaatttttggcgtt 8949678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 15636910 - 15636975
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  15636910 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 15636975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 19320930 - 19320865
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  19320930 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaaattttggcgtt 19320865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 23064045 - 23064114
Alignment:
Q  187 caaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| ||||||||| |||| || ||||| ||||| ||||  ||||||||||| ||||| ||||    
T  23064045 caaaaaattaggtcaaaattttatttttatgtccaaattttcattaactttatcttgaatttttggcgtt 23064114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 24281983 - 24281918
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  24281983 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 24281918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 28540849 - 28540914
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  28540849 aaattagctcaaaattttatttttaggtccaaattttccttagttttatcttgaatttttggcgtt 28540914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 28756306 - 28756371
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  28756306 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 28756371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 31312137 - 31312202
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  31312137 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 31312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 34680443 - 34680378
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  34680443 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 34680378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 38698941 - 38698876
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  38698941 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttgacgtt 38698876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 42931268 - 42931203
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  42931268 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 42931203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 47016356 - 47016291
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  47016356 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 47016291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 50642717 - 50642652
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  50642717 aaattagctcaaaattttatttttaagtccaaattttctttagttttatcttgaatttttggcgtt 50642652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 52224535 - 52224600
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  52224535 aaattagctcaaaattttatttttaggtccaaattttcgttaattttatcttgaatttttggcgtt 52224600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 52788969 - 52788904
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||| |||||||| |||| || ||||| |||||  ||| |||||||||||||||||| ||||    
T  52788969 aaattagcacaaaattttatttttaggtccaaattttcgttagttttatcttgaacttttgacgtt 52788904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 52823467 - 52823402
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||| |||| || ||||| ||||| |||| |||||||||||| ||||| ||||    
T  52823467 aaattagttcaaaattttatttttaggtccaaattttcattagttttatcttgaatttttggcgtt 52823402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 53231327 - 53231266
Alignment:
Q  190 aaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  53231327 aaaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 53231266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 54065759 - 54065804
Alignment:
Q  205 tttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||| ||  ||||||||||| |||||||||||||||||||||    
T  54065759 tttgatttttagatccatatttttgttacttttatcttgaactttt 54065804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 16618962 - 16618902
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||| ||||||||||| |||| || ||||| |||||| ||| |||||||||||| |||||    
T  16618962 aaatttgctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttg 16618902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 25768132 - 25768072
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  25768132 aaattagctcaaaattttatttttaggtccaaattttctttagttttatcttgaatttttg 25768072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 29247011 - 29246951
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| |||||    
T  29247011 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttg 29246951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 9e-33; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 32319836 - 32319662
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    |||||||||||| ||| | || ||||| ||||||||||||||||||||||| | ||||| ||| |||||| |||||| | | || |||||||||| |  |    
T  32319836 cactcagttttagtccatact-aaatctaaatttgtttaattatgtttaaacttttatgattttgaacaattttttgcacaagtgttaagaacatcatga 32319738  T
Q  175 aaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||| |||||||||||||| |||||||||| ||| || |||||| |||||| |||||||||| ||||||||||    
T  32319737 aaagtttatctgcaaaaaattatctcaaaattttattcctgcgtccagatttttgttacttttattttgaactttt 32319662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 44492889 - 44493037
Alignment:
Q  102 caaatttgtttaa-ttatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||| ||||||| ||| | ||| |||||  ||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||| | |    
T  44492889 caaatttgtttaagttatgttgaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtttccctgcaaaaaattatcgc 44492988  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||| || ||||| | |||||||||||||||||| |||||||    
T  44492989 aaaatttgatttatatgtccaga-ttttattacttttatctttaactttt 44493037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 31771322 - 31771476
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| |||  |||| | ||| ||||| |||||| |||||||| |||| ||||||||||||||||||||| ||| |||||||||||   |    
T  31771322 caaatttgtttaattgatgcataaactcttaagtttttgaacaattttttgtaaacgtgttaagaacattactaaaagttcctccgcaaaaaattattgc 31771421  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| |||||||| |||| | |||||||||||||||||| |||||||||||||    
T  31771422 aaaatttaatttctacatccaga-ttttattacttttatctttaacttttgtcgtt 31771476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 32318150 - 32318374
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| |    
T  32318150 cttacttaattataatagtgtttttagtccatataaaaaaa-ttatgcactcagttttagtccctact-aaatctaaatttgtttaattatgcttaaact 32318247  T
Q  128 attatgttttcgaacaacttttt-gtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatattt 226  Q
     ||| | ||| |||||| ||||| | | | || ||||||||||||| |||||||  ||||||||  |||| |||||||||| |||||| |||||| ||||    
T  32318248 tttaagattttgaacaatttttttgcacaagtgttaagaacattacgaaaagttcatctgcaaatgattatctcaaaattttatttctgcgtccagattt 32318347  T
Q  227 ttattacttttatcttgaacttttgtc 253  Q
    || |||||||||| |||||||||||||    
T  32318348 ttgttacttttattttgaacttttgtc 32318374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 14201261 - 14201103
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt--tctctgcaaaaaat 194  Q
    |||| |||||||||||||||||| ||||| | ||| ||||  ||| || ||||||||  ||| |||||||||||||||||||||  ||  |  |||||||    
T  14201261 aaattcaaatttgtttaattatgcttaaactcttaagtttgtgaataattttttgtagccgtgttaagaacattactaaaagttcatccgtaaaaaaaat 14201162  T
Q  195 tagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    || ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||    
T  14201161 tatctcaaaatttgatttctacgtccaatttttttttgcttttatcttgaacttttgtc 14201103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 30784165 - 30784344
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| ||||| ||||| || |||||||||||||| ||| ||||| | ||| ||||| |||||| |||||| | |||| ||||||||||||||    
T  30784165 cactcagtattagtccctcctcaattc-aaatttgtttaatttatgcttaaactcttaagttttagaacaattttttgcagacgtgttaagaacattact 30784263  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||| |  |||||||| ||||  | ||||||||||||||||||||||||  ||| ||| ||||||||| |||||||||||||    
T  30784264 aaaagctcatctgcaaataattgtcgcaaaatttgatttctacgtccata--tttgttaattttatctttaacttttgtcgtt 30784344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 3117975 - 3118131
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||||||||| | ||| | ||| |||||| || ||| | |  | ||||||||||||| |||||||  |||||||||||| |    
T  3117975 aaatctaaatttgtttaattatgtttaaacttttaagattttgaacaaattattgcacaaatgttaagaacattacgaaaagttcatctgcaaaaaataa 3118074  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||| |||||| |||| | |||||| |||||||||| |||||||||||||    
T  3118075 tctcaaaattttatttctgcgtctagattttttttacttttattttgaacttttgtc 3118131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 32319238 - 32319082
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | || |||||||||| |  |||||||| ||||||||||||||    
T  32319238 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaagtttatctgcaaaaaatta 32319139  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     ||||||| || ||| || |||||| |||||| |||||||||| |||||||||||||    
T  32319138 tctcaaaaatttattcctgcgtccagatttttgttacttttattttgaacttttgtc 32319082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 43933023 - 43932869
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||  || || |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    
T  43933023 caaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 43932924  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||| || ||||| | ||||||||||||||||||  |||||| |||||    
T  43932923 aaaatttgatttatatgtccaga-ttttattacttttatctttcacttttatcgtt 43932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 42487919 - 42487804
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttat 239  Q
    ||||| |||||||| | || |||||||||||| |||||||| ||||||||||||| | | ||||||||||||| || ||||||| |||||||||||||||    
T  42487919 aacaattttttgtagatgtgttaagaacattattaaaagttcctctgcaaaaaataatcgcaaaatttgatttatatgtccata-ttttattacttttat 42487821  T
Q  240 cttgaacttttgtcgtt 256  Q
    ||| ||||||| |||||    
T  42487820 ctttaacttttatcgtt 42487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 9111576 - 9111726
Alignment:
Q  103 aaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaa 202  Q
    ||||||||||||||||| ||||| | ||| | ||| ||||||||||||| | | || ||||||||||||| |||||||  ||| |||||||||| |||||    
T  9111576 aaatttgtttaattatgcttaaacttttaagatttagaacaactttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctcaa 9111675  T
Q  203 aatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||| |||| | | |||  | |||| |||||||||| |||||||||||||    
T  9111676 aattttatttttgcatcccgaattttgttacttttattttgaacttttgtc 9111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 10357321 - 10357469
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||  |      
T  10357321 caaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcga 10357420  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||||||| ||| | |||| ||| ||||||||| |||||||    
T  10357421 aaaatttgatttctacgcccaga-ttttgttaattttatctttaactttt 10357469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 253
Target Start/End: Original strand, 35498571 - 35498745
Alignment:
Q  78 tcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaa 176  Q
    ||||| ||| ||||||||||| || |||||||||||||| ||| ||||| | ||  ||| | |||||| |||| | | |||| |||||||||||||||||    
T  35498571 tcagtattagtcccttctcaattc-aaatttgtttaatttatgcttaaactcttgagttgttgaacaatttttcgcagacgtgttaagaacattactaaa 35498669  T
Q  177 agtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||| |||||||||  | | |||||||||||||||||||| |  ||| ||| ||||||||| ||||||||||    
T  35498670 agtttctctacaaaaaattgtcgcgaaatttgatttctacgtccaga-atttgttaattttatctttaacttttgtc 35498745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 40365114 - 40365019
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||  || ||||||||||  | ||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||||    
T  40365114 ttaagaacattactaaaagttcatcggcaaaaaattgtcacaaaatttgatttatacgtccata-ttttgttacttttatctttaacttttgtcgtt 40365019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 25666016 - 25666170
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacatta 171  Q
    |||||||||| ||| ||||| ||||| || |||||| ||||||| || |||||| | ||  ||||| |||||| |||||  | |||||||||||||||||    
T  25666016 tacactcagtattagtccctcctcaattc-aaatttatttaatttatatttaaactcttgagtttttgaacaattttttacagacgtattaagaacatta 25666114  T
Q  172 ctaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||||||| || ||| |||||||  | |||||||||||||||||||||| |||||    
T  25666115 ctaaaagttcctatgcgaaaaattgtcgcaaaatttgatttctacgtccagatttt 25666170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 256
Target Start/End: Original strand, 41120744 - 41120898
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||  |      
T  41120744 caaatttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgt 41120843  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
     |||||||||||||||||||||| |||| ||| ||||||||| || ||||| ||||    
T  41120844 gaaatttgatttctacgtccata-ttttgttaattttatctttaatttttgccgtt 41120898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 3043612 - 3043496
Alignment:
Q  139 gaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattactttta 238  Q
    |||||| |||||| | |||| |||| |||||||||||||| | ||||||||||||||    |||||||||||||||||||||| | |||| ||| |||||    
T  3043612 gaacaattttttgcagacgtgttaaaaacattactaaaagctactctgcaaaaaattgtggcaaaatttgatttctacgtcca-aattttgttaatttta 3043514  T
Q  239 tcttgaacttttgtcgtt 256  Q
    |||| |||||||||||||    
T  3043513 tctttaacttttgtcgtt 3043496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 23496560 - 23496720
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaacttttt-gtatacgtattaagaacattactaaaagtttctctgcaaaaaatt 195  Q
    |||||||||||||| |||| ||| ||||| | ||  |||||  ||||| ||||| ||| |||||||   |||||||| ||||||||||| ||||||||||    
T  23496560 aaatccaaatttgtgtaatgatgcttaaactcttgagtttttaaacaattttttcgtagacgtattggaaacattaccaaaagtttctccgcaaaaaatt 23496659  T
Q  196 agctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||  ||||||||||| ||| |||| |||||| |||  ||| |||| |||||||||||||    
T  23496660 agcttgaaatttgatttatacttccacatttttgttatctttgtcttaaacttttgtcgtt 23496720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 33832412 - 33832292
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||| ||| |||| ||||||||||||||||||||| |||| |||||||||  | |    
T  33832412 caaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgtagacgtgttaagaacattactaaaagttcctctacaaaaaattgtcgc 33832313  T
Q  201 aaaatttgatttctacgtcca 221  Q
    |||||||||||| ||||||||    
T  33832312 aaaatttgatttgtacgtcca 33832292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 42274558 - 42274436
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    |||||| ||||| |||||| | |||| |||| |||||||||||||||| ||||||||||||||  | |||||||||||||||| ||| | | |||| |||    
T  42274558 gttttcaaacaaatttttgcagacgtgttaaaaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctatgtctaga-ttttgtta 42274460  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| |||||||| ||||    
T  42274459 attttatctttaacttttgccgtt 42274436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 7439287 - 7439380
Alignment:
Q  162 aagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||||| |||| |||||||||  | |||||||| ||||||||||||| | |||| ||| ||||||||| |||||||||||||    
T  7439287 aagaacattactaaaagttcctctacaaaaaattgtcgcaaaatttaatttctacgtccaga-ttttgttaattttatctttaacttttgtcgtt 7439380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 207
Target Start/End: Complemental strand, 9112036 - 9111859
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| || || || ||||| ||||||||||||||||| ||||| |    
T  9112036 cttacttaattataatagtgtttttagtccatataaaacaa-ttatgcactcagttttagtctctgct-aaatctaaatttgtttaattatgcttaaact 9111939  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaattt 207  Q
     ||| |  ||  ||||| |||||| | | ||||||||||||| || |||||||| |||||||||||||| ||||||||||    
T  9111938 tttaagacttttaacaagtttttgcacaagtattaagaacatcacgaaaagtttatctgcaaaaaattatctcaaaattt 9111859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 36512263 - 36512110
Alignment:
Q  104 aatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtat-acgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    ||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| |  |||| ||||||| ||||||||||||||||||| ||||||||  | ||    
T  36512263 aatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaggacgtgttaagaatattactaaaagtttctctgtaaaaaattgtcgca 36512164  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| ||| |||| | |||||||| ||||||||| ||| |||||||||    
T  36512163 aaatttgatttttacatccaga-ttttattaattttatctttaacatttgtcgtt 36512110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 8738129 - 8737951
Alignment:
Q  73 tacactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacatta 171  Q
    |||||||||  ||| ||||||||| | || |||||||||||||| ||| ||||| | ||  ||||| |||||| ||| |  | |||| |||| |||||||    
T  8738129 tacactcagcattagtcccttctcgattc-aaatttgtttaatttatgcttaaattcttgagtttttgaacaattttatacagacgtgttaaaaacatta 8738031  T
Q  172 ctaaaagtttctctgcaa-aaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttg 251  Q
    | |||||||||||||||| ||||||  | |||||||||||||||||||||| | |||| ||| ||||||||| ||||||||    
T  8738030 cgaaaagtttctctgcaaaaaaattgtcgcaaaatttgatttctacgtcca-aattttgttaattttatctttaacttttg 8737951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 20719320 - 20719212
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||| ||||| |||||||  |||| ||||||||||||||||||||| ||| |||||||| || | |    
T  20719320 caaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattactaaaagttcctccgcaaaaaactatcgc 20719221  T
Q  201 aaaatttga 209  Q
    |||||||||    
T  20719220 aaaatttga 20719212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 33001111 - 33001040
Alignment:
Q  140 aacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatt 211  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | ||||||||||||    
T  33001111 aacaattttttgtagacgtgttaagaacattactaaaagttactccgcaaaaaattatcgcaaaatttgatt 33001040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 19058873 - 19058784
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttt 249  Q
    |||| ||||||| |||||  ||||| ||||||||||||||||||||||||||| |||  | | |||||| ||||||||||||| ||||||    
T  19058873 ttaaaaacattattaaaaaattctccgcaaaaaattagctcaaaatttgatttttacaactagatttttgttacttttatcttaaacttt 19058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 29809560 - 29809465
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||||||  ||| |||||||||| | |||||| |||||||||| |||| | |||| ||| ||||||| | |||||||||||||    
T  29809560 ttaagaacattactaaaagttcatctacaaaaaattatcgcaaaatctgatttctacatcca-aattttgttaattttatcattaacttttgtcgtt 29809465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 6457272 - 6457422
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  ||||| |||||| |||||| | |||| || ||||||||| |||||| | ||||||||||||    |      
T  6457272 caaatttgtttaatttatggttaaactcttgagtttttgaacaattttttgaagacgtgttgagaacattaataaaagctcctctgcaaaaaaaattcgt 6457371  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| |||||||||    
T  6457372 aaaatttgatttctacgtccaga-ttttgttaattttatctttaacttttgt 6457422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 8094797 - 8094876
Alignment:
Q  165 aacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttga 244  Q
    |||||||  |||| |||||| ||||||||||||||||||||||||||| || ||| | ||||| |||| |||||||||||    
T  8094797 aacattataaaaaatttctccgcaaaaaattagctcaaaatttgatttttaggtcgaaattttcattagttttatcttga 8094876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 20719998 - 20720108
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgc-aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttga 244  Q
    ||||| || |||| ||||||||||||||||||||| ||| || ||||||| | | ||||||||||||| || || || | |||||||||||||||||| |    
T  20719998 tttttatagacgtgttaagaacattactaaaagttcctccgcaaaaaaataatcgcaaaatttgatttatatgttcaga-ttttattacttttatcttta 20720096  T
Q  245 acttttgtcgtt 256  Q
    |||||| |||||    
T  20720097 acttttatcgtt 20720108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 10287226 - 10287288
Alignment:
Q  188 aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||| || ||||||| |||||||||||||||||||| ||| ||||||| |||||||||    
T  10287226 aaaaaattatctaaaaatttaatttctacgtccatatttttgttaattttatcatgaactttt 10287288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 25100644 - 25100744
Alignment:
Q  155 acgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcg 254  Q
    |||| ||||||||||||||||||||| ||||||||||||||  | | ||||||||||| ||||| || | |||| ||| ||||| ||| |||||||| ||    
T  25100644 acgtgttaagaacattactaaaagttcctctgcaaaaaattgtcgctaaatttgatttttacgttcaga-ttttgttaattttagctttaacttttgccg 25100742  T
Q  255 tt 256  Q
    ||    
T  25100743 tt 25100744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 31436045 - 31436195
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  ||||| |||||| |||| | | ||||| |||||||| |||||||||||  ||| |||||||||    ||    
T  31436045 aaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtactaagaacaatactaaaagttcatctacaaaaaattgttgca 31436144  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||||||||||||| || |  ||| ||| ||||||||| ||||||||||    
T  31436145 aaatttgatttctacgttcaga-atttgttaattttatctttaacttttgtc 31436195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 34073800 - 34073711
Alignment:
Q  163 agaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattac-ttttatcttgaacttttgt 252  Q
    |||||||||||||||||| |||   ||||||||| | |||||||| |||||||| |||||| |||| |||| ||||||||| |||||||||    
T  34073800 agaacattactaaaagttcctccataaaaaattatcgcaaaatttaatttctacatccata-ttttgttactttttatctttaacttttgt 34073711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 20973238 - 20973303
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||| ||| |||||||||||| ||||| ||||    
T  20973238 aaattagctcaaaattttatttttaggtccaaatttttgttagttttatcttgaatttttggcgtt 20973303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 37593106 - 37593014
Alignment:
Q  160 ttaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
    ||||||| ||||||||||||| || |||||||||||  | |||||||||| || ||||| || | |||| ||| ||||||||| ||||||||||    
T  37593106 ttaagaatattactaaaagttcctttgcaaaaaattgccgcaaaatttgacttttacgttca-aattttgttaattttatctttaacttttgtc 37593014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 11708235 - 11708303
Alignment:
Q  188 aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||||||||||||||||| || ||| | | ||||| ||||||||||||||| ||||| ||||    
T  11708235 aaaaaatgagctcaaaatttgatttttaagtctaaaattttactacttttatcttgaaattttgacgtt 11708303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 20721505 - 20721426
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  20721505 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 20721426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 20721419 - 20721370
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  20721419 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 20721370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 3118874 - 3118778
Alignment:
Q  21 tttaatacttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatg 119  Q
    |||||| |||| ||||||||||||||||||||||||| |||        |||| |||||||||||| ||||| || ||||| |||||||||||| ||||    
T  3118874 tttaatccttacttaattttaatagtgtttttagtccatat-aaaaaaattatgcactcagttttagtccctact-aaatctaaatttgtttaactatg 3118778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 10214923 - 10214858
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  10214923 aaattagctcaaaattttatttttaggttcaaatttttgttagttttatcttgaatttttggcgtt 10214858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 10972466 - 10972531
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  10972466 aaattagctcaaaattttatttttaggttcaaatttttgttagttttatcttgaatttttggcgtt 10972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 12620328 - 12620393
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  12620328 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 12620393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 13027762 - 13027658
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattacta 174  Q
    ||||| |||||| ||| |||| ||||| ||||||||||||||||| |||||   ||| ||||| |||||| ||||| || |  | |||||||||||||||    
T  13027762 cactctgttttagtcctttct-aaatctaaatttgtttaattatgcttaaacacttaagtttttgaacaattttttatacatttgttaagaacattacta 13027664  T
Q  175 aaagtt 180  Q
     |||||    
T  13027663 taagtt 13027658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 13803280 - 13803345
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  13803280 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 13803345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 14542265 - 14542200
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  14542265 aaattagctcaaaattttatttttaggtccaaattttctttagttttatcttgaatttttggcgtt 14542200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 21440021 - 21439973
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  21440021 aaaatttgatttatatgtccatatttt-attacttttatctttaactttt 21439973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 35516417 - 35516352
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| ||  |||| |||||  ||| |||||||||||||||||| ||||    
T  35516417 aaattagctcaaaattttatttttagatccaaattttcgttagttttatcttgaacttttggcgtt 35516352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 36218621 - 36218686
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  36218621 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 36218686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 41178700 - 41178765
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || ||||| |||||  ||| |||||||||||| ||||| ||||    
T  41178700 aaattagctcaaaattttatttttaggtccaaattttcgttagttttatcttgaatttttggcgtt 41178765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 20701262 - 20701330
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacat 169  Q
    ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||||||||||||||    
T  20701262 caaatttgtttaatttatgcttaaacttttaagttttttaacaattttttgtagacgtattaagaacat 20701330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 35424841 - 35424813
Alignment:
Q  223 atttttattacttttatcttgaacttttg 251  Q
    |||||||||||||||||||||||||||||    
T  35424841 atttttattacttttatcttgaacttttg 35424813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 43861710 - 43861766
Alignment:
Q  189 aaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaa 245  Q
    |||||| |||||||||||||| || || ||| | ||||| |||||||||||||||||    
T  43861710 aaaaatgagctcaaaatttgaattttaggtcgaaattttcattacttttatcttgaa 43861766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 282867 - 283082
Alignment:
Q  28 cttatttaattttaatagtgtttttagtccttatnnnnnnnnttatacactcagttttattcccttctcaaatccaaatttgtttaattatgtttaaaat 127  Q
    |||| |||||| |||||||||||||||||| |||        |||| |||||||||||| ||||| | |||||| ||||||||||||||||| ||||| |    
T  282867 cttacttaattataatagtgtttttagtccatataaaaaaa-ttatgcactcagttttagtccctac-caaatctaaatttgtttaattatgcttaaact 282964  T
Q  128 attatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
     ||| | ||| |||||| |||||| | | || ||||||||||||| |||||||  |||||||||||||| |||||||||| |||||| |||||| | |||    
T  282965 tttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctcaaaattttatttctgcgtccagaattt 283064  T
Q  228 tattacttttatcttgaa 245  Q
    | |||||||||| |||||    
T  283065 tgttacttttattttgaa 283082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 283531 - 283375
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    ||||| ||||||||||||||||| ||||| | ||| | ||| |||||| |||||| | | ||||||||||||| || |||| ||| ||||||||||||||    
T  283531 aaatctaaatttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaattttatctgcaaaaaatta 283432  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtc 253  Q
     |||||||||  ||| || |||||| |||||| |||||||||| |||||||||||||    
T  283431 tctcaaaattgtattcctgcgtccagatttttgttacttttattttgaacttttgtc 283375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 35255 - 35433
Alignment:
Q  75 cactcagttttattcccttctcaaatccaaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattact 173  Q
    |||||||| ||| |||||||   ||| ||||||||||||||| ||| ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||| |    
T  35255 cactcagtattagtcccttc---aattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattagt 35351  T
Q  174 aaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||| ||| |||||||||||   ||||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  35352 aaaagttcctccgcaaaaaattattgcaaaatttgatttatatgtccaga-ttttattacttttatctttaacttttatcgtt 35433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 17665 - 17515
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||  ||||| | ||| ||||| |||||| |||||||| |||| ||||||||||||||||||||| ||| | |||||||||   |    
T  17665 caaatttgtttaatttatagttaaactcttaagtttttgaacaattttttgtagacgtgttaagaacattactaaaagttcctccgtaaaaaattattgc 17566  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||||||||||| || ||||| | |||||||||||||||||| |||||||||    
T  17565 aaaatttgatttttaagtccaga-ttttattacttttatctttaacttttgt 17515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 7151 - 6998
Alignment:
Q  103 aaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctca 201  Q
    |||||||||||||| ||| ||||| | ||  |||||  ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||| | ||    
T  7151 aaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattactaaaagttcctctgcaaaaaattatcgca 7052  T
Q  202 aaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||| || ||||| | |||||||| ||||||||| || |||| |||||    
T  7051 aaatttgatttatatgtcca-aattttattatttttatctttaatttttatcgtt 6998  T

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Target: scaffold0445 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 6206 - 6058
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||  | |||| ||||||||||||||||||||| || |||||||||||  | |    
T  6206 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaaacgtgttaagaacattactaaaagttactatgcaaaaaattgtcgc 6107  T
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    |||||||||||||||||| || | |||| ||| ||||||||| |||||||    
T  6106 aaaatttgatttctacgttcaga-ttttgttaattttatctttaactttt 6058  T

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Target: scaffold0707 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 7157 - 7035
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttatta 232  Q
    ||||| |||||| |||||| | |||| |||| ||||||||||||||||  |||||||||||||  | |||||||||||||||||||||| | |||| |||    
T  7157 gtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgcaaaaaattgtcacaaaatttgatttctacgtcca-aattttgtta 7059  T
Q  233 cttttatcttgaacttttgtcgtt 256  Q
     ||||||||| |||||||| ||||    
T  7058 attttatctttaacttttgccgtt 7035  T

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Target: scaffold1160 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 1195 - 1289
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    ||||| |||||| |||||| | |||| |||||||||||||| ||||||||| |||||||||||  | |||||||||||||||||||||| |||||    
T  1195 gtttttgaacaattttttgcagacgtgttaagaacattacttaaagtttctttgcaaaaaattgtcgcaaaatttgatttctacgtccagatttt 1289  T

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Target: scaffold1190 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 448 - 366
Alignment:
Q  133 gttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttcta 215  Q
    ||||| |||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||    
T  448 gtttttgaacaattttttggagacgtgttaagaacattactaaaagttcctctgcaaaaaattgtcacaaaatttgatttcta 366  T

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Target: scaffold0097 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 23158 - 23050
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||| |||||| ||||| |||||||  |||| ||||||||||||||||||||| ||| |||||||| || | |    
T  23158 caaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattactaaaagttcctccgcaaaaaactatcgc 23059  T
Q  201 aaaatttga 209  Q
    |||||||||    
T  23058 aaaatttga 23050  T

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Target: scaffold0097; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 23836 - 23946
Alignment:
Q  146 tttttgtatacgtattaagaacattactaaaagtttctctgc-aaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttga 244  Q
    ||||| || |||| ||||||||||||||||||||| ||| || ||||||| | | ||||||||||||| || || || | |||||||||||||||||| |    
T  23836 tttttatagacgtgttaagaacattactaaaagttcctccgcaaaaaaataatcgcaaaatttgatttatatgttcaga-ttttattacttttatcttta 23934  T
Q  245 acttttgtcgtt 256  Q
    |||||| |||||    
T  23935 acttttatcgtt 23946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 25333 - 25254
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  25333 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 25254  T

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Target: scaffold0097; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 25247 - 25198
Alignment:
Q  200 caaaatttgatttctacgtccatatttttattacttttatcttgaactttt 250  Q
    ||||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  25247 caaaatttgatttatatgtccatatttt-attacttttatctttaactttt 25198  T

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Target: scaffold0024 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 48077 - 47985
Alignment:
Q  164 gaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||||   || || |||| || |||||||||| ||||||||||||  || ||| |||||||||||||||||||||||||||    
T  48077 gaacattactaaaagttcgcctacagaaaaatatctcaaaattttatttctacgtccggatatttgttacttttatcttgaacttttgtcgtt 47985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 255
Target Start/End: Original strand, 52346 - 52504
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    |||| ||||||| |||||||||  ||||| | ||| |||||  || || |||||| |  | |||| ||||||||||||||||||||||   |||||| ||    
T  52346 aaattcaaatttatttaattatacttaaactcttaagtttttaaataattttttgcacgcctattgagaacattactaaaagtttctccctaaaaaaata 52445  T
Q  197 gctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgt 255  Q
     |||||||||||||||||| || ||  ||||| || ||||||||||| |||||| ||||    
T  52446 tctcaaaatttgatttctatgtgcaattttttgttgcttttatcttgtacttttatcgt 52504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 6999 - 7063
Alignment:
Q  163 agaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgtccatatttt 227  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||||||| |||| |||||    
T  6999 agaacattactaaaagtttctccgcaaaaaattatagcaaaatttgatttctacatccaaatttt 7063  T

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Target: scaffold0734 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 3336 - 3281
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    |||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||    
T  3336 aaaatttgatttctacatccatatttttgttacttatatcttaaacttttgtcgtt 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 6464 - 6350
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaattagctc 200  Q
    ||||||||||||||| ||| ||||| | ||  |||||  ||||| |||||| | |||| |||||||||||||||||||||  ||| |||||||||  | |    
T  6464 caaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttggagacgtgttaagaacattactaaaagttcatctacaaaaaattgtcgc 6365  T
Q  201 aaaatttgatttcta 215  Q
    |||||||||||||||    
T  6364 aaaatttgatttcta 6350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 25067 - 24927
Alignment:
Q  97 aaatccaaatttgtttaattatgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtttctctgcaaaaaatta 196  Q
    |||| |||||||||||||||||||||||| | |||  |||| ||| || ||||||   |  |||||| ||||||||||| ||||  ||  || | |||||    
T  25067 aaattcaaatttgtttaattatgtttaaactcttaaatttttgaataattttttgctaaaatattaa-aacattactaagagttcatcctcatataatta 24969  T
Q  197 gctcaaaatttgatttctacgtccatatttttattactttta 238  Q
     |||||||||||||||||||||||| |||||| ||| |||||    
T  24968 tctcaaaatttgatttctacgtccaaatttttgttaatttta 24927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 4082 - 4031
Alignment:
Q  201 aaaatttgatttctacgtccatatttttattacttttatcttgaacttttgt 252  Q
    |||||||||||||||||| ||||||||| |||||| |||||| |||||||||    
T  4082 aaaatttgatttctacgttcatatttttgttacttatatcttaaacttttgt 4031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 675 - 754
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||||||||| | ||  ||||| |||||| |||||| | ||||  ||||||||||||||||||||    
T  675 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgataagaacattactaaaagtt 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 20009 - 19974
Alignment:
Q  18 aaatttaatacttatttaattttaatagtgttttta 53  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20009 aaatttaatacttatttaattttaatagttttttta 19974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 49047 - 48968
Alignment:
Q  102 caaatttgtttaatt-atgtttaaaatattatgttttcgaacaactttttgtatacgtattaagaacattactaaaagtt 180  Q
    ||||||||||||||| ||  ||||| | ||| |||||  ||||| |||||||| |||| |||||||||||||||||||||    
T  49047 caaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 48968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 4193 - 4143
Alignment:
Q  168 attactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgt 218  Q
    ||||||||||||| || |||||||||||  | |||||||||||||||||||    
T  4193 attactaaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgt 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 9310 - 9375
Alignment:
Q  191 aaattagctcaaaatttgatttctacgtccatatttttattacttttatcttgaacttttgtcgtt 256  Q
    ||||||||||||||||| |||| || || || |||||| ||| |||||||||||| ||||| ||||    
T  9310 aaattagctcaaaattttatttttaggtgcaaatttttgttagttttatcttgaatttttggcgtt 9375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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