View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2975_high_22 (Length: 262)
Name: NF2975_high_22
Description: NF2975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2975_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 76 - 247
Target Start/End: Original strand, 12631476 - 12631647
Alignment:
| Q |
76 |
gacataaacttccttcttcctttaaaatgttatgagtttatttgatttaagaaaagaaaatgatttcacaatgattttgaacagttttttagagcagaat |
175 |
Q |
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| T |
12631476 |
gacataaacttccttcttcctttaaaatgttatgagtttatttgatttaagaaaagaaaaagatttcacaatgattttgaacagttttttagagcagaat |
12631575 |
T |
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| Q |
176 |
tacaatttgtgttacaatttgttttagagcacaaggtgaaaggaactaatattgtttttaaagcgaacgtga |
247 |
Q |
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| T |
12631576 |
tacaatttgtgttacaatttgttttagagcacaaggtgaaaggaactgataatgtttttaaagcgaaggtga |
12631647 |
T |
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